Supplementary Fig. S1

25
Individual Animal Data for Methylation- Sensitive Restriction Digestion, followed by Arbitrarily- Primed PCR (AP-PCR) and Capillary Eletrophoresis, for B6C3F1 and C57BL/6 Mice, 2 and 4 Week Control and 0.05% (w/w) PB Treatment Groups Supplementary Fig. S1

description

Supplementary Fig. S1. Individual Animal Data for Methylation- Sensitive Restriction Digestion, followed by Arbitrarily-Primed PCR (AP-PCR) and Capillary Eletrophoresis, for B6C3F1 and C57BL/6 Mice, 2 and 4 Week Control and 0.05% (w/w) PB Treatment Groups. - PowerPoint PPT Presentation

Transcript of Supplementary Fig. S1

Page 1: Supplementary Fig. S1

Individual Animal Data for Methylation- Sensitive Restriction Digestion, followed

by Arbitrarily-Primed PCR (AP-PCR) and Capillary Eletrophoresis, for

B6C3F1 and C57BL/6 Mice, 2 and 4 Week Control and 0.05% (w/w) PB

Treatment Groups

Supplementary Fig. S1

Page 2: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 150 200 250 300 350 400 450 500 550 600

PCR Product Size (bp)

Pe

ak

Are

a

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

RsaI/HpaII Digest: B6C3F1, 2 Week Control Individual Animal Data

Supplementary Figure S2. Individual animal data for the B6C3F1, 2 week control group (n = 6) after RsaI/HpaII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 3: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

300000

100 150 200 250 300 350 400 450 500 550 600

PCR Product Size (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

RsaI/HpaII Digest: B6C3F1, 2 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S3. Individual animal data for the B6C3F1, 2 week 0.05% PB-treated group (n = 6) after RsaI/HpaII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 4: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

140000

160000

180000

200000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6 C57-7

RsaI/HpaII Digest: C57BL/6, 2 Week Control Individual Animal Data

Supplementary Figure S4. Individual animal data for the C57BL/6, 2 week control group (n = 7) after RsaI/HpaII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 5: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

140000

160000

180000

200000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pe

ak A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6

RsaI/HpaII Digest: C57BL/6, 2 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S5. Individual animal data for the C57BL/6, 2 week 0.05% PB-treated group (n = 6) after RsaI/HpaII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 6: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

300000

100 150 200 250 300 350 400 450 500 550 600

PCR Product Size (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6 B6-7

RsaI/HpaII Digest: B6C3F1, 4 Week Control Individual Animal Data

Supplementary Figure S6. Individual animal data for the B6C3F1, 4 week control group (n = 7) after RsaI/HpaII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 7: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 150 200 250 300 350 400 450 500 550 600

PCR Product Size (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

RsaI/HpaII Digest: B6C3F1, 4 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S7. Individual animal data for the B6C3F1, 4 week 0.05% PB-treated group (n = 6) after RsaI/HpaII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 8: Supplementary Fig. S1

0

100000

200000

300000

400000

500000

600000

100 150 200 250 300 350 400 450 500 550 600

PCR Product Size (bp)

Pea

k A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6 C57-7

RsaI/HpaII Digest: C57BL/6, 4 Week Control Individual Animal Data

Supplementary Figure S8. Individual animal data for the C57BL/6, 4 week control group (n = 7) after RsaI/HpaII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 9: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 150 200 250 300 350 400 450 500 550 600

PCR Product Size (bp)

Pea

k A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6

RsaI/HpaII Digest: C57BL/6, 4 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S9. Individual animal data for the C57BL/6, 4 week 0.05% PB-treated group (n = 6) after RsaI/HpaII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 10: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

140000

160000

180000

200000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pe

ak

Are

a

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

RsaI/MspI Digest: B6C3F1, 2 Week Control Individual Animal Data

Supplementary Figure S10. Individual animal data for the B6C3F1, 2 week control group (n = 6) after RsaI/MspI digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 11: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

140000

160000

180000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pe

ak

Are

a

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

RsaI/MspI Digest: B6C3F1, 2 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S11. Individual animal data for the B6C3F1, 2 week 0.05% PB-treated group (n = 6) after RsaI/MspI digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 12: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

300000

350000

400000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

C57BL/6-1 C57-2 C57-3 C57-4 C57-5 C57-6 C57-7

RsaI/MspI Digest: C57BL/6, 2 Week Control Individual Animal Data

Supplementary Figure S12. Individual animal data for the C57BL/6, 2 week control group (n = 7) after RsaI/MspI digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 13: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6

RsaI/MspI Digest: C57BL/6, 2 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S13. Individual animal data for the C57BL/6, 2 week 0.05% PB-treated group (n = 6) after RsaI/MspI digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 14: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

300000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6 B6-7

RsaI/MspI Digest: B6C3F1, 4 Week Control Individual Animal Data

Supplementary Figure S14. Individual animal data for the B6C3F1, 4 week control group (n = 7) after RsaI/MspI digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 15: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

RsaI/MspI Digest: B6C3F1, 4 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S15. Individual animal data for the B6C3F1, 4 week 0.05% PB-treated group (n = 6) after RsaI/MspI digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 16: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

C1 C2 C3 C4 C5 C6 C7

RsaI/MspI Digest: C57BL/6, 4 Week Control Individual Animal Data

Supplementary Figure S16. Individual animal data for the C57BL/6, 4 week control group (n = 7) after RsaI/MspI digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 17: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

100 150 200 250 300 350 400 450 500 550 600

PCR Product Size (bp)

Pea

k A

rea

C1 C2 C3 C4 C5 C6

RsaI/MspI Digest: C57BL/6, 4 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S17. Individual animal data for the C57BL/6, 4 week 0.05% PB-treated group (n = 6) after RsaI/MspI digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 18: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

140000

100 200 300 400 500 600 700

PCR Product (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

BfaI/BssHII Digest: B6C3F1, 2 Week Control Individual Animal Data

Supplementary Figure S18. Individual animal data for the B6C3F1, 2 week control group (n = 6) after BfaI/BssHII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 19: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

140000

160000

100 200 300 400 500 600 700

PCR Product (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

BfaI/BssHII Digest: B6C3F1, 2 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S19. Individual animal data for the B6C3F1, 2 week 0.05% PB-treated group (n = 6) after BfaI/BssHII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 20: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

140000

160000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6 C57-7

BfaI/BssHII Digest: C57BL/6, 2 Week Control Individual Animal Data

Supplementary Figure S20. Individual animal data for the C57BL/6, 2 week control group (n = 7) after BfaI/BssHII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 21: Supplementary Fig. S1

0

20000

40000

60000

80000

100000

120000

100 200 300 400 500 600 700

PCR Product (bp)

Pea

k A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6

BfaI/BssHII Digest: C57BL/6, 2 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S21. Individual animal data for the C57BL/6, 2 week 0.05% PB-treated group (n = 6) after BfaI/BssHII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 22: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6 B6-7

BfaI/BssHII Digest: B6C3F1, 4 Week Control Individual Animal Data

Supplementary Figure S22. Individual animal data for the B6C3F1, 4 week control group (n = 7) after BfaI/BssHII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 23: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

300000

350000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

B6-1 B6-2 B6-3 B6-4 B6-5 B6-6

BfaI/BssHII Digest: B6C3F1, 4 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S23. Individual animal data for the B6C3F1, 4 week 0.05% PB-treated group (n = 6) after BfaI/BssHII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 24: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 200 300 400 500 600 700

PCR Product Size (bp)

Pea

k A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6 C57-7

BfaI/BssHII Digest: C57BL/6, 4 Week Control Individual Animal Data

Supplementary Figure S24. Individual animal data for the C57BL/6, 4 week control group (n = 7) after BfaI/BssHII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.

Page 25: Supplementary Fig. S1

0

50000

100000

150000

200000

250000

100 200 300 400 500 600 700

PCR Product (bp)

Pea

k A

rea

C57-1 C57-2 C57-3 C57-4 C57-5 C57-6

BfaI/BssHII Digest: C57BL/6, 4 Week 0.05% PB-treated Individual Animal Data

Supplementary Figure S25. Individual animal data for the C57BL/6, 4 week 0.05% PB-treated group (n = 6) after BfaI/BssHII digestion, followed by arbitrarily-primed PCR (AP-PCR) and capillary electrophoresis, are shown. The X-axis represents the size of the PCR products that formed, and the Y-axis represents the amount of each PCR product. Each color represents a different animal within the group, and each dot represents the average of 2 duplicate AP-PCR reactions.