Computational Toxicology and QSARmms.dsfarm.unipd.it/files/Lezioni/SSVGRC/PDF/... · Computational...

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ComputationalComputational ToxicologyToxicology

and QSARand QSAR

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

byby Stefano MoroStefano MoroMolecular Modeling Section (MMS)Molecular Modeling Section (MMS)

Department of Pharmaceutical and Pharmacological SciencesDepartment of Pharmaceutical and Pharmacological Sciences

University of PadovaUniversity of Padova©2016©2016

FirstFirst ofof all,all, drawdraw youryour structurestructure……

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

FirstFirst ofof all,all, drawdraw youryour structurestructure……

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

ButBut youyou cancan dodo severalseveral otherother

interestinginteresting thingsthings::

Molecular Formula: C13H11FFormula Weight: 186.2248432Composition: C(83.84%) H(5.95%) F(10.20%)Molar Refractivity: 55.66 ± 0.3 cm3

Molar Volume: 175.2 ± 3.0 cm3

Parachor: 425.4 ± 4.0 cm3

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

Parachor: 425.4 ± 4.0 cmIndex of Refraction: 1.548 ± 0.02Surface Tension: 34.7 ± 3.0 dyne/cmDensity: 1.062 ± 0.06 g/cm3

Dielectric Constant: Not availablePolarizability: 22.06 ± 0.5 10-24cm3

RDBE: 8Monoisotopic Mass: 186.084479 DaNominal Mass: 186 DaAverage Mass: 186.2248 DaM+: 186.08393 DaM-: 186.085027 Da[M+H]+: 187.091755 Da[M+H]-: 187.092852 Da[M-H]+: 185.076105 Da[M-H]-: 185.077202 Da

ButBut youyou cancan dodo severalseveral otherother

interestinginteresting thingsthings::

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

Now,Now, wewe cancan downloaddownload VEGAVEGA……

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

HereHere isis VEGA!VEGA!

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

HereHere isis VEGA!VEGA!

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

HereHere isis VEGA!VEGA!

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S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

andand herehere ourour reportreport……

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

andand herehere ourour reportreport……

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

andand herehere ourour reportreport……

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

……againagain::

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S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

……againagain::

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy

EnjoyEnjoy youryour predictionspredictions…… butbut cumcumgranumgranum salissalis !!!!!!

S. MORO – SSVGRCMM S Confidential and Property of ©2012 Molecular Modeling Section

Dept. Pharmaceutical and Pharmacological Sciences –University of Padova - Italy