TIME SERIES ANALYSIS FOR STUDIES OF WEATHER AND HEALTH Paul Wilkinson Public & Environmental Health...
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TIME SERIES ANALYSIS FOR STUDIES OF WEATHER AND
HEALTH
Paul WilkinsonPublic & Environmental Health Research Unit
London School of Hygiene & Tropical MedicineKeppel Street
London WC1E 7HT (UK)
www.lshtm.ac.uk [email protected]
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02
55
07
51
00
12
51
50
Ca
rdio
vasc
ula
r d
ea
ths/
da
y
01jan1990 01jan1991 01jan1992 01jan1993 01jan1994
CVD deaths Mean temperature
LONDON, 1990 - 1994
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CLIMATE OR WEATHER?
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TWO APPROACHES
• Episode analysis- transparent- risk defined by comparison to local baseline
• Regression analysis of all days of year- uses full data set- requires fuller data and analysis of
confounders- can be combined with episode analysis
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EPISODES
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No.
of
death
s/day
Date
Influenza ‘epidemic’
Period of heat
Smooth function of date with control for
influenza
Smooth function of date
Triangle: attributable deaths
PRINCIPLES OF EPISODE ANALYSIS
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INTERPRETATION
• Common sense, transparent• Relevant to PH warning systems
But• How to define episode?
- relative or absolute threshold- duration- composite variables
• Uses only selected part of data• Most sophisticated analysis requires same
methods as for regression of all days of year
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REGRESSION OF ALL DAYS
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TIME-SERIES
• Short-term temporal associations
• Usually day to day fluctuations over several years
• Similar to any regression analysis but with specific features
• Methodologically sound(same population compared with itself day by day)
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• Time-varying confoundersinfluenzaday of the week, public holidayspollution
• Secular trend
• Season
STATISTICAL ISSUES 1
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STATISTICAL ISSUES 1I
• Shape of exposure-response functionsmooth functionslinear splines
• Lagssimple lagsdistributed lags
• Temporal auto-correlation
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Source: Anderson HR, et al. Air pollution and daily mortality in London: 1987-92. Br Med J 1996; 312:665-9
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Sofia
Temperature (2 day mean) -12 0 10 20 30
85
100
140
London
Temperature (2 day mean)-12 0 10 20 30
85
100
140
Temperature (2 week mean)-12 0 10 20 30
85
100
140
Temperature (2 week mean)-12 0 10 20 30
85
100
140
TEMPERATURE DEPENDENCE OF DAILY MORTALITY, LONDON
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THE MODEL…
(log) rate = ß0 +
ß1(high temp.) +
ß2(low temp.)
ß1=heat slopeß2=cold slope
+
ß3(pollution) +
ß4(influenza) +
ß5(day, PH)
measured confounders+
ß6(season) +
ß7(trend)unmeasured confounders
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LAGS
• Heat impacts short: 0-2 daysCold impacts long: 0-21 days
• Vary by cause-of-death- CVD: prompt- respiratory: slow
• Should include terms for all relevant lags
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LONDON, 1986-96: LAGS FOR COLD-RELATED MORTALITY
% I
NC
RE
AS
E I
N M
OR
TA
LIT
Y/
ºC F
ALL
IN
TE
MP
ER
AT
UR
E
DAYS OF LAG
ALL CAUSE
0 5 10 151.65
1.7
1.75
1.8
1.85
CARDIOVASCULAR
0 5 10 151.7
1.75
1.8
1.85
1.9
RESPIRATORY
0 5 10 153.8
3.9
4
4.1
4.2
NON-CARDIORESPIRATORY
0 5 10 15.7
.8
.9
1
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Lag
RR
0 5 10 15 20
1.0
00
1.0
05
1.0
10
*
**
** * * *
**
**
**
** * *
* *
*
*
*
* * **
**
**
**
** * * * * *
*
*
SANTIAGO: COLD-RELATED MORTALITYCARDIO-VASCULAR DISEASE
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Lag
RR
0 5 10 15 20
0.9
95
1.0
00
1.0
05
1.0
10
1.0
15
*
* **
* * * * * * * * * * **
* * *
*
*
*
*
* * **
* * * * * * * * ** * *
* *
*
SANTIAGO: COLD-RELATED MORTALITYRESPIRATORY DISEASE
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LJUBLJANA
-10 0 10 20 30 40
80100120140
BUCHAREST
-10 0 10 20 30 40
80100120140
SOFIA
-10 0 10 20 30 40
80100120140
DELHI
-10 0 10 20 30 40
80100120140
MONTERREY
-10 0 10 20 30 40
80100120140
MEXICO
-10 0 10 20 30 40
80100120140
CHIANGMAI
-10 0 10 20 30 40
80100120140
BANGKOK
-10 0 10 20 30 40
80100120140
SALVADOR
-10 0 10 20 30 40
80100120140
SAO PAULO
-10 0 10 20 30 40
80100120140
SANTIAGO
-10 0 10 20 30 40
80100120140
CAPE TOWN
-10 0 10 20 30 40
80100120140
LAG: 0-1 DAYSHEAT
LJUBLJANA
-10 0 10 20 30 40
80100120140
BUCHAREST
-10 0 10 20 30 40
80100120140
SOFIA
-10 0 10 20 30 40
80100120140
DELHI
-10 0 10 20 30 40
80100120140
MONTERREY
-10 0 10 20 30 40
80100120140
MEXICO
-10 0 10 20 30 40
80100120140
CHIANGMAI
-10 0 10 20 30 40
80100120140
BANGKOK
-10 0 10 20 30 40
80100120140
SALVADOR
-10 0 10 20 30 40
80100120140
SAO PAULO
-10 0 10 20 30 40
80100120140
SANTIAGO
-10 0 10 20 30 40
80100120140
CAPE TOWN
-10 0 10 20 30 40
80100120140
LAG: 0-13 DAYSCOLD
Threshold for heat effect
Threshold for cold effect
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CONTROLLNG FOR SEASON
TEMPERATURE
MORTALITYSEASON
Infectious disease
Diet
UNRECORDED FACTORS
Human behaviours
X X
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• Moving averages
• Fourier series (trigonometric terms)
• Smoothing splines
• Stratification by date
• Other…
METHODS OF SEASONAL CONTROL
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All cause
0
0.5
1
1.5
2
2.5
3
3.5
4df 7df 10df 12df 4df 7df 10df 12df 4df 7df 10df 12df 4df 7df 10df 12df
decade 1 decade 2 decade 3 decade 4
% c
hang
eEFFECT OF INCREASING SEASONAL CONTROLGradient of cold-related mortality, London
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Unadjusted
Rel
ativ
e m
orta
lity
month1 2 3 4 5 6 7 8 9 10 11 12
50
75
100
125
150
Adjusted for low temperature
Rel
ativ
e m
orta
lity
month1 2 3 4 5 6 7 8 9 10 11 12
50
75
100
125
150
Adjusted for influenza count
Rel
ativ
e m
orta
lity
month1 2 3 4 5 6 7 8 9 10 11 12
50
75
100
125
150
Adjusted for month low temperature and influenza
Rel
ativ
e m
orta
lity
month1 2 3 4 5 6 7 8 9 10 11 12
50
75
100
125
150
SEASONAL MORTALITY, GB
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Month-to-month variation in mortality (adjusted for region and time-trend) accounted for 17% of annual all-cause mortality but only:
- 7.8% after adjustment for temperature- 12.6% after adjustment for influenza A
counts- 5.2% after adjustment for both
SEASONAL FLUCTUATION IN MORTALITY, GB
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FUTURE IMPACTS
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01jan1991 01jan1993 31dec19940
20
40
60
Seasonal mortality pattern, DelhiD
aily
death
s
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Delhi,
India: Average annual pattern of temperature, rainfall and
daily mortality (data for all 1991-94 years, averaged, by day of year)
1st Jan 1st July
0
50
100
150
-10
0
10
20
30
40
Jan 1 July 1 Dec 31
150
100
50
0
40
30
20
10
0
-10
Daily deaths
Daily temperature
Monthly rainfall
TemperatureDeaths
McMichael et al, in press
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0 10 20 30 40
80
100
120
140
Heat-related mortality, DelhiR
ela
tive m
ort
alit
y (
% o
f d
aily
avera
ge)
Daily mean temperature /degrees Celsius
Temperature distribution
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Health impact model Generates comparative estimates of the regional impact of each climate scenario on specific health outcomes
Conversion to GBD ‘currency’ to allow summation of the effects of different health impacts
GHG emissions scenarios Defined by IPCC
GCM model: Generates series of maps of predicted future distribution of climate variables
Level Age group (years)0-4 5-14 15-29 30-44 45-59 60-69 70+
1 1.0 1.0 1.0 1.0 1.0 1.0 1.02 1.2 1.2 1.2 1.2 1.2 1.2 1.23 1.7 1.7 1.7 1.7 1.7 1.7 1.71 1.0 1.0 1.0 1.0 1.0 1.0 1.02 1.2 1.2 1.2 1.2 1.2 1.2 1.23 1.7 1.7 1.7 1.7 1.7 1.7 1.71 1.0 1.0 1.0 1.0 1.0 1.0 1.02 1.2 1.2 1.2 1.2 1.2 1.2 1.23 1.7 1.7 1.7 1.7 1.7 1.7 1.71 1.0 1.0 1.0 1.0 1.0 1.0 1.02 1.2 1.2 1.2 1.2 1.2 1.2 1.23 1.7 1.7 1.7 1.7 1.7 1.7 1.71 1.0 1.0 1.0 1.0 1.0 1.0 1.02 1.2 1.2 1.2 1.2 1.2 1.2 1.23 1.7 1.7 1.7 1.7 1.7 1.7 1.7
RISK ASSESSMENT FOR CLIMATE CHANGE
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• EXTRAPOLATION(going beyond the data)
• VARIATION(..in weather-health relationship -- largely unquantified)
• ADAPTATION(we learn to live with a warmer world)
• MODIFICATION(more things will change than just the climate)
BUT FOUR REASONS TO HESITATE…
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Source: Checkley et al, Lancet 2000
Daily hospitalizations for diarrhoea
Daily temperature
19971993
HOSPITALIZATIONS FOR DIARRHOEA, LIMA PERUShaded region corresponds to 1997-98 El Niño event
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• Changes in population- Demographic structure (age)- Prevalence of weather-sensitive
disease
• Environmental modifiers
• Adaptive responses- Physiological habituation
(acclimatization)- Behavioural change- Structural adaptation- PH interventions
CHANGING VULNERABILITY
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• Provide evidence on short-term associations of weather and health
• ‘Robust’ design
• Repeated finding of direct h + c effects
• Some uncertainties over PH significance
• Uncertainties in extrapolation to future(No historical analogue of climate change)
SUMMARY: TIME-SERIES STUDIES
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INTERMISSION…
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TIME SERIES ANALYSIS FOR STUDIES OF WEATHER AND
HEALTH
Part 2
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HARVESTING
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FRAILTY MODEL
General populatio
n
Frail population
, Nt
Death
DtIt
Nt = Nt-1 + It - Dt-1
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IDEALIZED SCHEMA
MORTALITY
HEAT
A
B
weaker absen
t
strong correlationPeriod of
averaging
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** **
******
********
******** ********************************************* *** ** **********************************************************************
*****************
*********
***
**
** ****************************** ****** ********************************* ****************** **** * ** * *
* *
**** * * ********* ** ** ******************* *** *********************** ****
*
* *** *
**
**
***
** ** **********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
**************************************************************************************************************************
*****************************************************************
************************************************************
***************************************************************
*********************************
*****
Mean temperature, average(lags 0-1)
Pe
rce
nta
ge
of
me
an
nu
mb
er
of
de
ath
s
5 10 15 20 25
95
10
01
05
110
115
12
0
** ** * *****
********
******** ********************************************* *** ** *************************************************************************
***********************
** *
** ** ******* *********************** ****** ********************************* ****************** **** * ** * *
* *
**** * * ********* ** ** ******************* *** *********************** ****
** **
* ***
*****
*
***
**************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
*************************************************************************************************************************
***************************************************************************
****************************************************************************************************************************************
*
***
******
********
******** ********************************************* *** ** *********************************************************************
******************
*********
***
**
*********
*********************** ****** ********************************* ****************** **** * ** * *
* *
**** * * ********* ** ** ******************* *** ***********************
*****
* **
**
**
*
****
*
***
************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
**************************************************************************************************************
****************************************************************
*******************************************************
************************************************
*********************************************************************************
ALL-CAUSE MORTALITY
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ALL CAUSE MORTALITY: HEAT DEATHS
Lag
PER
CEN
TA
GE IN
CR
EA
SE IN
MO
RTA
LITY
PER
ºC
BELO
W C
OLD
TH
RESH
OLD
0 5 10 15 20
-0.5
00.5
11.5
**
*
** * *
* * * * * * * **
* * **
*
*
*
**
* * * **
* * * * * * * **
* *
*
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LondonE
xces
s ris
k (9
5% C
I)
lag0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30
-4
-2
0
2
4
6
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
CUMULATIVE EXCESS RISK OF HEAT DEATH AS AFUNCTION OF INCREASING LAG: LONDON
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CUMULATIVE EXCESS RISK OF HEAT DEATH AS AFUNCTION OF INCREASING LAG: DELHIDelhi
Exc
ess
risk
(95%
CI)
lag0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30
-4
-2
0
2
4
6
- - - - - - - - - - - - - - - - - - - - - - - - - -- -
- - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - -- - -
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CUMULATIVE EXCESS RISK OF HEAT DEATH AS AFUNCTION OF INCREASING LAG: SAO PAULO
Sao PaoloE
xces
s ris
k (9
5% C
I)
lag0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30
-4
-2
0
2
4
6
- - - - - - - - - - - - - - - - - - - - --
- - - - - - - --
- - - - - - - - - - - - - - - - - - - - -- - - - - - - -
--
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UNCERTAINTIES IN FUTURE HEALTH IMPACTS
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(1) EXTRAPOLATION
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LJUBLJANA
-10 0 10 20 30 40
80100120140
BUCHAREST
-10 0 10 20 30 40
80100120140
SOFIA
-10 0 10 20 30 40
80100120140
DELHI
-10 0 10 20 30 40
80100120140
MONTERREY
-10 0 10 20 30 40
80100120140
MEXICO
-10 0 10 20 30 40
80100120140
CHIANGMAI
-10 0 10 20 30 40
80100120140
BANGKOK
-10 0 10 20 30 40
80100120140
SALVADOR
-10 0 10 20 30 40
80100120140
SAO PAULO
-10 0 10 20 30 40
80100120140
SANTIAGO
-10 0 10 20 30 40
80100120140
CAPE TOWN
-10 0 10 20 30 40
80100120140
MEAN DAILY TEMPERATURE/ degrees Celsius
MORTALITY (% of annual average)
?
HEAT DEATHSMonterrey, Mexico
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(2) VARIATION
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LJUBLJANA
-10 0 10 20 30 40
80100120140
BUCHAREST
-10 0 10 20 30 40
80100120140
SOFIA
-10 0 10 20 30 40
80100120140
DELHI
-10 0 10 20 30 40
80100120140
MONTERREY
-10 0 10 20 30 40
80100120140
MEXICO
-10 0 10 20 30 40
80100120140
CHIANGMAI
-10 0 10 20 30 40
80100120140
BANGKOK
-10 0 10 20 30 40
80100120140
SALVADOR
-10 0 10 20 30 40
80100120140
SAO PAULO
-10 0 10 20 30 40
80100120140
SANTIAGO
-10 0 10 20 30 40
80100120140
CAPE TOWN
-10 0 10 20 30 40
80100120140
Mortality (% of annual average)
Mean daily temperature in degrees Celsius
Daily mortality in relation to mean temperature during preceding two days
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LJUBLJANA
-10 0 10 20 30 40
80100120140
BUCHAREST
-10 0 10 20 30 40
80100120140
SOFIA
-10 0 10 20 30 40
80100120140
DELHI
-10 0 10 20 30 40
80100120140
MONTERREY
-10 0 10 20 30 40
80100120140
MEXICO
-10 0 10 20 30 40
80100120140
CHIANGMAI
-10 0 10 20 30 40
80100120140
BANGKOK
-10 0 10 20 30 40
80100120140
SALVADOR
-10 0 10 20 30 40
80100120140
SAO PAULO
-10 0 10 20 30 40
80100120140
SANTIAGO
-10 0 10 20 30 40
80100120140
CAPE TOWN
-10 0 10 20 30 40
80100120140
Daily mortality in relation to mean temperature during preceding two
weeks
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(3) ADAPTATION
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Th
resh
old
for
heat
imp
act
s
Maximum daily mean temperature
20 25 30 35
-10
0
10
20
30
Thresholds for heat-related mortality: 12 lower- & middle-income cities
Positive slope suggests adaptation
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7.0°C
12.5°C
7
8
9
10
11
12
SP01
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Ris
k of
death
rela
tive t
o a
nnual m
inim
um
10-w
eek
movin
g a
vera
ge
Day of year 1Jan 1Apr 1Jul 1Oct 31Dec
.75
1
1.25
1.5
1.75
2
High standardized heating costs
Low standardized heating costs
Seasonal variation in deaths from cardiovascular disease by cost of home heating. England, 1986-1996.
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CARDIOVASCULAR MORTALITY IN RELATION TO HOME HEATING: ENGLAND, 1986-96
Standardized indoor temp. /deg Celsius
Mortality(deaths/day)
Winter:non-winter ratio*
Winter Non-winter
Unadjusted Adjusted for deprivation
1 <14.8 0.8(1080)
0.6(1568)
1.39(1.28,1.50)
1.38(1.16,1.63)
2 14.8- 0.7(973)
0.6(1580)
1.24(1.15,1.35)
1.24(1.05,1.47)
3 16.6- 0.7(869)
0.5(1442)
1.21(1.11,1.31)
1.21(1.02,1.44)
4 18.4- 0.7(957)
0.6(1569)
1.22(1.13,1.32)
1.23(1.04,1.46)
5 19.4-27.0
0.8(1055)
0.7(1906)
1.11(1.03,1.20)
1.13(0.96,1.34)
* All ratios adjusted for region
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(4) EFFECT MODIFICATION
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Table. Change in population health and deaths attributable to cold over the 20th century
Percentage of deaths by age & cause:
Period
1900-10 1927-37 1954-64 1986-96
0-14 years15-64 years65+ years
38.5%32.0%29.4%
13.3%40.5%46.1%
4.9%31.4%63.7%
1.5%18.8%79.7%
CardiovascularRespiratoryOther
12.1%18.9%69.0%
27.9%20.0%52.1%
33.3%14.1%52.6%
42.3%14.0%43.7%
Percent of deaths attributable to cold
12.5(10.1, 14.9)
11.2(8.40, 14.0)
8.74(5.93, 11.5)
5.42(4.13, 6.69)
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05
01
001
502
002
503
00
1900 1902 1904 1906 1908 1910
1900 to 1910
05
01
001
502
002
503
00
1927 1929 1931 1933 1935 1937
1927 to 1937
05
01
001
502
002
503
00
1954 1956 1958 1960 1962 1964
1954 to 1964
05
01
001
502
002
503
00
1986 1988 1990 1992 1994 1996
1986 to 1996
R
atio
of
obse
rve
d/ex
pect
ed
deat
hs
ALL CAUSE MORTALITY
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-20
020
4060
-10 0 10 20 30
1900-1910
-20
020
4060
-10 0 10 20 30
1927-1937
-20
020
4060
-10 0 10 20 30
1954-1964
-20
020
4060
-10 0 10 20 30
1986-1996
All-cause
Temperature (degrees Celsius)
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IMPLICATIONS FOR MONITORING HEALTH IMPACTS OF CLIMATE
CHANGE
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METHODOLOGICAL ISSUES
• Gradual change• Year to year fluctuation• Secular trends• Modifiers
- physiological acclimatization- structural and behavioural adaptation- specific protection measures
• Attribution
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1. Measurement of trend in disease rates
2. Measurement of trend in attributable disease: direct method
3. Application of climate-disease relationships to measured changes in climate: indirect method
Confounded by secular trends: un-interpretable unless v. specific markerBased on analysis of (short-term) climate-disease relationships
Depends on understanding effect modification or assumption of its absence
MONITORING
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Deaths in June & July, London, 1986-1996
Death
s in
June &
July
Year
Days
over
27ºC
1986 1988 1990 1992 1994 19960
5000
10000
15000
0
10
20
30
Deaths in June & July
Days over 27 Celsius
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Deaths attributable to heat, London, 1986-1996
Perc
en
t att
ributa
ble
to h
eat
year
Days
over
27ºC
1986 1988 1990 1992 1994 19960
.2
.4
.6
.8
1
0
5
10
15
20
25
30Heat deaths
Days over 27 Celsius
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Central England mean June & July temperatures, 1900-1999Tem
pera
ture
/degre
es
Cels
ius
Year
1900 1920 1940 1960 1980 2000
6
10
14
18
22
Regression slope, 1986-1996
19
86 1
99
6
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Band of historical climatic variability
20
15
1900 21002000
14
16
17
18
13
19Average Global Temperature (OC)
Year205019501860
Low
High
Central estimate = 2.5 oC (+ increased variability)
IPCC (2001) estimatesa 1.4-5.8 oC increase
This presents a rate-of-change problem for many natural systems/processes
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NEEDED EVIDENCE
MITIGATION
Evidence for change that benefits health & lowers emissions
• Reduction in greenhouse gas emissions/energy use
• Social, economic and technological changes
ADAPTATION/PREPAREDNESS
Evidence that can influence health in short and longer term
• Understanding of weather-health > climate-health relationships
• Vulnerability in terms of impacts, geographical distribution and population characteristics
• Public protection through:public health system (short-medium term)infrastructure, adaptation
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CONTACT DERTAILS
Sari KovatsPaul Wilkinson
Public & Environmental Health Research UnitLondon School of Hygiene & Tropical MedicineKeppel StreetLondonWC1E 7HT(UK)
www.lshtm.ac.ukTel: +44 (0)20 7972 2415Fax: +44 (0)20 7580 4524
[email protected]@lshtm.ac.uk