The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a =...

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nucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N 5 –N 7 = 12) The Thomson Problem 1904: J.J. Thomson’s attempt (Phil. Mag. 7, 237) to explain the periodic table in terms of rigid electron shells fails…. What is the ground state of interacting particles on a sphere for R/a >> 1? (R = sphere radius, a = particle size) Be? C? Mg? “The analytical and geometrical difficulties …of corpuscles…arranged in shells are much greater… and I have not as yet succeeded in getting a general solution.” J.J. Thomson

Transcript of The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a =...

Page 1: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

nucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 – N7 = 12)

The Thomson Problem

1904: J.J. Thomson’s attempt (Phil. Mag. 7, 237) to explain the periodic table in terms of rigidelectron shells fails….

What is the ground state ofinteracting particles on a sphere forR/a >> 1? (R = sphere radius,a = particle size)

Be?C?

Mg?

“The analytical and geometrical difficulties…of corpuscles…arranged in shells are much greater… and I have not as yet succeeded ingetting a general solution.” J.J. Thomson

Page 2: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Spherical Crystallography: Virus Buckling and Grain Boundary Scars

Particle packings on curved surfaces – “geometrical frustration”--Thomson problem: ‘theory’ of the periodic table (circa 1904)--Icosahedral packings in virus shells (N5 – N7 = 12)--Theory of disclination buckling in viruses--Theory of crumpling at high “Foppl-von Karman number

Grain boundary scars and colloids on water droplets--What happens when shells cannot buckle? grain boundaries!!--Experiments: ‘colloidosomes’ on water droplets (A. Bausch et al.)--Grain bounaries in ground state terminate inside curved media….

Liquid crystal textures on curved surfaces--Colloids with a valence--Baseball textures: ‘sp3 hybridization’ on a micron scale….--Ordered states on bumps and torii

M. RubinsteinS. SachdevS. Seung

L. Peliti

J. LidmarL. Mirny

M. BowickA. TravessetV. Vitelli

Page 3: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

20th century solutions of the Thomson problem….

Fullerene molecule; (1,1)

Geodesic house

Geodesic Dome

Page 4: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Biological solutions of the Thomson problem …..

-Icosadeltahedral solutions of the Thomson problem for intermediate particle numbers are exhibited by the capsidshells of virus structures for ‘magic numbers’ of proteinsubunits indexed by pairs of integers (P,Q)

•Flat surface: Triangular lattice tiles the plane

•Ordering on a sphere: ‘geometric frustration’forces at least twelve 5-fold disclinations intothe ground state…

Simian virus SV40

( , ) (1,0)P Q =( , ) (3,1)P Q =

2 210( ) 2N particle number P Q PQ= = + + +

D. Caspar & A. Klug,Cold Spring Harbor Symp.on Quant. Biology 27, 1 (1962)(P, Q) = (1,2)

Page 5: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

A gallery of viruses…T.S. Baker et al., Microbiol. Mol. Biol. Rev. 63, 862 (1999)

The small viruses are round and large ones are facetted…

Page 6: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

2 2 2 2 2 24

2 2 2 2

22 2 24

2 2

2

1 ( )

f f ffy x x y x y x

S r

y

f f fY x y x y

χ χ χκ

χ

∂ ∂ ∂ ∂ ∂ ∂∇ = + −

∂ ∂ ∂ ∂ ∂ ∂ ∂ ∂

⎛ ⎞∂ ∂ ∂∇ = − +⎜ ⎟∂ ∂

+∂ ∂⎝ ⎠

( ) ( )

2 ( ) ( )ij im jn m n

ij ij kk

r r

u r u r

σ ε ε χ

µ λδ

= ∂ ∂

= +4 ( )

2Y µ µ λ

µ λ+

=+

von Karman equations

Strain relaxation via disclinationbuckling in large viruses…

1 1 2

1 2 0 2 1 2

1 2

u (x ,x )(x ,x ) u (x ,x )

f (x ,x )

⎛ ⎞⎜ ⎟= + ⎜ ⎟⎜ ⎟⎝ ⎠

r r

S. Seung and drn, Phys.Rev. A38, 1055 (1988)

Solve for ground state via a ‘tethered surface’floating mesh triangulation …..

(P,Q) = (14,14)N = 5882

M. Bowick, A. Cacciuto, A. Travessett and drn, Phys. Rev. Lett. 89, 185502 (2002)

(P,Q) = (6,6)N = 1082

Strain energy

Page 7: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

/ 20/ 10/ 2/ 1

( / 0)

YYYYflat Y

κκκκ

κ

====

E/Y

Disclination buckling transition

2 2 2 2 21 [ ( ( )) 2 ( ) ( )]2 ij kkE d x f x u x u xκ µ λ= ∇ + +∫

To solve von Karman equations must, in an Eulerian representation,minimze the nonlinear elastic energy:

where,

E ~ κ ln (R/Rb), R> Rb

n nα βi

E ~ Y R2, R < Rb

2R

Disclinations buckle above a critical radius Rb such that

YRb2/κ = 154….

But what about 12 interacting disclinations on a sphere?

In a Lagrangian representation, minimize instead…

2

,

(| | )2

2 3 3

i jij

E r r a n n

Y

α βα β

ε κ

ε

< > < >

= − − −

=

∑ ∑ i

( )( )1 ( ) ( )( )2

jiij

j i i j

u xu x f x f xu xx x x x

⎡ ⎤∂∂ ∂ ∂= + +⎢ ⎥

∂ ∂ ∂ ∂⎢ ⎥⎣ ⎦

Page 8: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Solution of the Foppl-von Karman equations for viruses (arbitrary vK!)

Shape depends only on the ‘von-Karman number’ vK = YR2/κ

κ = bending rigidity of shellY = Young’s modulus of shellR = mean virus radius

(vK)c= 154 in flat space….

J. Lidmar, L. Mirny and drn, Phys. Rev. E68, 051910 (2003)

vK = YR2/κ

Asp

heri

city

Page 9: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

HK97 virusvK = 1480

Fits to specific viruses

RM

S de

viat

ion

The precursor, capsid, or “prohead”, of HK97 is more spherical, in constrast to thelarger, more facted mature form shown here.

Evidence for a buckling transition ….2 2312(1 )( / )vK R hν= −

For a uniform elastic shell of radius R and thickness h and 3d Poisson ratio ν3…

vK

Yeast virus L-AvK = 547

RM

S de

viat

ion

2 /vK YR κ=

Page 10: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Large vK: Computer Simulations of CrumplingG. A. Vliegennthart and G. Gompper, Nature Materials (in press)

A flat self-avoiding disk is crushed inside a hollow sphere from initial radius R0 to a final radius Rf by application of an inward radial force F….

How does the energy of the creases depend on size?

What is the effect of self-avoidance?

Crushed triangular lattice, N = 61816 particles…

Page 11: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Two interacting disclinations with separation L[A. Lobkovsky and T. Witten, see Physica A313, 83 (2002)]

r1

R

1

ridge radius of curvature ~ ,

downwarddeflection

r yy =

22 2

2 11 2

1 1 ( ) ; ~ , ~ ( / ) , totE da Y da r r y y R da yRr r

κ ε ε⎛ ⎞

≈ + + >> =⎜ ⎟⎝ ⎠

∫ ∫ ∫

1/ 6 1/ 65* 2/3 * 1/3

3( ) , ( )tot totR y YE y Y y R E y Ry R Y

κκ κκ

⎛ ⎞ ⎛ ⎞≈ + → ≈ ≈⎜ ⎟ ⎜ ⎟⎝ ⎠ ⎝ ⎠

~ 0

1/ 6 1/ 6 2~ /( ) , ( ) ~ ( ) , / 1toty R vK E y vK vK YRκ κ=

YR2/κ = vK = Foppl-von Karman number is a kind of “Reynolds number”for crumpling…

R

Page 12: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Osmotic Crushing of Amorphous ShellsExperiments by Andreas Bausch, Tech. Univ. of Munich

Amorphous colloidal assemblies formed on water droplets in oil. The exterior oil is replaced by water and the resulting shell crushed osmotically (bottom) to produce a crumpled object with vK = 107

710vK ≈

In the presence of thermal fluctuations, the bending rigidity and Young’s modulus become strongly dependent on length scales

( ) ( / ) , ( ) ( / ) uR th R thl l l Y l Y l l ηηκ κ −≈ ≈

0.75 0.80 η ≈ − 0.36 0.50uη ≈ −

3 24 /( )th Bl k TYπ κ= 40thl nm≈

R

rL

(4 ) /(6 ) 0.76

(2 3 ) /(6 ) 0.74

~ ~ , ~ ~R

u

u u

r R RE R

η η

η η ηη η

+ −

+ − + −

r

2/3 1/3(without thermal fluctuations, , )r R E R∼ ∼

Page 13: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Spherical crystallography of ‘colloidosomes’(see also “Pickering emulsions”)

“Colloidosome” = colloids of radius a coating water droplet(radius R) -- Weitz Laboratory

Confocal image: P. Lipowsky, & A. Bausch

Ordering on a sphere a minimum of 12 5-fold disclinations, as in soccer balls and fullerenes -- what happens for R/a >> 1 ?

Adsorb, say, latex spheres onto lipid bilayer vesicles or water droplets

Useful for encapsulation of flavors and fragrances, drug delivery

[H. Aranda-Espinoza e.t al. Science 285, 394 (1999)]

Strength of colloidal ‘armor plating’ influenced by defects in shell….

For water droplets, surface tension prevents buckling….

Page 14: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Grain boundary instabilities

If droplet surface tension enforces spherical shape,disclination buckling is replaced by an instability towards grain boundaries….

can insert the required dislocations intothe ground state by hand….

or construct a continuum elastic theory of topological defects on the sphere…: M. J. Bowick, A. Travesset and drn, Phys. Rev. B62, 8738 (2000)

M. J. W. Dodgson and M. A. Moore, Phys. Rev. B55, 3816 (1997)Perez-Garrido, M.J.W. Dodgson and M. A. Moore, Phys. Rev.B56,3640 (1997).Alar Toomre (unpublished)A. Perez-Garrido and M. A. Moore, Phys.Rev. B60, 15628 (1998)

Page 15: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Finding the ground state of ~26,000 particles on a sphere is replaced by minimizing the energy of only ~ 250 interacting disclinations, representing points of local 5- and 7-fold symmetry.

Dislocation = 5-7 pair =

Grain boundary = 5-7 5-7 5-7 …= …

Continuum elastic theory of defects on spheres

2

1 1

Y(Y) ( , ; , )36

N Ni i j j

i j corei= j=

E R q q NEπ χ θ φ θ φ= +∑∑

(1 cos ) / 22

0

ln( , ; , ) 11

a a b b zR dzz

βχ θ φ θ φ

−⎛ ⎞= +⎜ ⎟−⎝ ⎠∫

[χ Solves biharmonic eq. on a sphere]

Page 16: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Finding the ground state of ~26,000 particles on a sphere is replaced by minimizing the energy of only ~ 250 interacting disclinations, representing points of local 5- and 7-fold symmetry.

Dislocation = 5-7 pair =

Grain boundary = 5-7 5-7 5-7 …= …

Continuum elastic theory of defects on spheres

What happens forreal colloidosomes?(silanized silica beads)

2

1 1

Y(Y) ( , ; , )36

N Ni i j j

i j corei= j=

E R q q NEπ χ θ φ θ φ= +∑∑

(1 cos ) / 22

0

ln( , ; , ) 11

a a b b zR dzz

βχ θ φ θ φ

−⎛ ⎞= +⎜ ⎟−⎝ ⎠∫

[χ Solves biharmonic eq. on a sphere]

Page 17: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

R/a >> 1: Grain Boundaries in the Ground State!!

0 5 10 15 20 25

0

2

4

6

8

10

Defect Screening as a Function of R/a (75% a cut)

Ass

ocia

ted

Dis

loca

tions

per

Unp

aire

d D

iscl

inat

ion

R/a

(R/a)c ≈ 5, determined bydislocation core energy

Bausch et al. Science 299, 1716 (2003)polystrene beads on water….

Page 18: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

R/a >> 1: Grain Boundaries in the Ground State!!

111 5cos (5 / 6) 0.413

Slope π −⎡ ⎤= − ≈⎣ ⎦

0 5 10 15 20 25

0

2

4

6

8

10

Defect Screening as a Function of R/a (75% a cut)

Ass

ocia

ted

Dis

loca

tions

per

Unp

aire

d D

iscl

inat

ion

R/a

(R/a)c ≈ 5, determined bydislocation core energy

Bausch et al. Science 299, 1716 (2003)polystrene beads on water….

Page 19: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Vacancies and interstitials on curved surfaces interstitial movie, courtesy of Mark Bowick, Cris Cecka and Alan Middleton; see also, http://www.phy.syr.edu/condensedmatter/thomson/

V = vacanciesI = interstitials

Page 20: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

1904: J. J. Thomson asks how particles packon a sphere – relevant to viruses, colloid-coated droplets, and multielectron bubbles in helium

Continuum elastic theory (with M. Bowick and A. Travesset) shows that the 5-fold disclinationsbecome unstable to unusual finite length grain boundaries (strings of dislocations) for R/a >> 1.

Finding the ground state of ~26,000 particles on a sphere is replaced by minimizing the energy of only ~ 250 interacting disclinations, representing points of local 5- and 7-fold symmetry.

Grain boundaries in ground state for R/a > 5-10 have important implications for the mechanical stability and porosity of colloidosomes, proposed as delivery vehicles for drugs, flavors and fragrances.

The Thomson Problem and Spherical CrystallographyThe Thomson Problem and Spherical Crystallography

Simian virus SV40

Ordering on a sphere a minimum of 12 5-fold disclinations, as in soccer balls and fullerenes -- what happens for R/a >> 1 ?

“Colloidosome” = colloids of radius a coating water droplet(radius R) -- Weitz Laboratory

Dislocations (5-7 defect pairs) embedded in spherical ground states

Page 21: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Nematic textures on spheres: toward a tetravalent chemistry of colloids… [drn, NanoLetters, 2, 1125 (2002)]

Long-range repulsion ⇒

TETRAHEDRAL DEFECT ARRAY

+1NorthPole

( ) caRKE += ln2total π ( )total ln 'E K R a cπ= +

+½ +½

Z = 2 Z = 4

Page 22: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Linking colloids with a valence

Possible nematogens include gemini lipids,(say, on an oil droplet), triblockcopolymers, and CdSe nanocrystals.

• The four unique “bald spots” on a nematic-coated sphere can be functionalized with DNA linkers…

• may be possible to reproduce the quantum chemistry of sp3 hybridization on the micron scale of colloids….

Fluoresent beads on nematic dropletcolloidal analogue of sulfer…Z. Cheng, D. Link and P. Lu, Weitz group

functionalize colloidal particles with , e.g., DNA…

Page 23: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Making nematic shells: double emulsions

Outer Fluid

Inner Fluid

Middle Fluid

Injection TubeCollection Tube

Middle liquid

Inner liquid

Outer liquid

Collection tube Injection tube

Water droplet coated with a nematic shell of thickness h

Anchoring at inner and outer surface: PLANAR

Viscosities: ηouter > ηinner , ηmiddle

Outer liquid: Glycerol + water + PVA

Inner liquid: Water + PVA

Middle liquid: Chloroform + LC (5CB)

Experiments: Alberto Fernandez-Nieves, Weitz Laboratory

LC+chloroform shell

h

Page 24: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

In fact, valences Z = 4, 3 and 2 are possible….

Z = 2100 micron droplet;shell ~ 6-8 microns

110 micron droplet; shell ~ 6-8 microns

Z =44 defect shell (Inhomogeneous shell thickness distorts perfect tetrahedron…)

2 defect shell

90 micron droplet;shell ~ 4-7 microns

Z = 33 defect shell!!

(See M. Kleman and O. D. Lavrentovich)

Page 25: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Assume a homogeneous thickness h and a single Frank constant K…..

Z = 4 shell(four s = ½ disclinations)

Z = 2 shell(two pairs of ½-hedgehogs…)

disclinations (thin films) vs. ½ - hedgehogs (thick films)

4 4 ( / 4) ln( / ) ...E K Kh R aπ= × + 2 2 ( ) ln( / ) ...E K h R hπ= × +

hR

• ½-hedgehog defects preferred for h > hc, such that E4 (h) > E2(h)

• this leads to .ch const Ra= ×

a = core radius

ha

/R a

Z = 4

Z = 2

Z = 3?

Page 26: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Colloids with nematicshells of thickness h….

OR ?

Which surface texture dominates?

*But colloids with Z = 2 appear above a thickness h* ≈ const.√(R a); R = sphere Radius a = microscopic lengthNematic order parameter

*Colloids with Z = 4 are always energetically preferable for thin nematic coatings

ha

/R a

Z = 4

Z = 2

Page 27: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

Curvature-induced defect unbinding on the torus

[M. Bowick, A. Travessett and drn, Phys. Rev.E(in press)]

Consider hexatic order on a torroidal template

no topological necessity for defects in the ground state

nevertheless, Gaussian curvature causes a defect-

unbinding transition for M < Mc , for “fat” torii and

moderate vesicle sizes….

21 2

20

83

R RMa

π= = number of microscopic

degrees of freedom

12

1 214.6 , / ,1c

rM r r R Rr

+⎛ ⎞≈ =⎜ ⎟−⎝ ⎠ 1010 , 2,cM rClifford torus

= =

M. Mutz and D. Bensimon, Phys. Rev. A43, 4525 (1991)

Page 28: The Thomson Problem Presentations/CrystallographyTalk.pdfnucleation and growth on a sphere: R/a = 10; 1314 particles M. Rubinstein and drn (N5 –N7 = 12) The Thomson Problem 1904:

A Gaussian bump (prepare lithographically)

Defect generation and deconfinement on corrugated topographies(Vincenzo Vitelli and drn)

Equilibrium hexatic phases formed by templatinglarge ordered arrays of block copolymer spherical domains on silicon substrates (Segalman et al. Macromolecules, 36, 3272, 2002)

Dislocations can be generated thermally OR by increasing the curvature of the substrate ….

Smooth ground state texture for an XY model on the bump.

Experiments by Rachel Segalman, Alex Hexamerand Ed Kramer, UCSB