The Digital Revolution and Its Impact on Agriculture Production … · EVOLUTION OF SEQUENCING...

Naturally ahead © Copyright BIOMIN Holding GmbH

The Digital Revolution and Its Impact

on Agriculture Production and Quality

Franz Waxenecker

Biomin

Naturally ahead © Copyright BIOMIN Holding GmbHI 2

DIGITISATION LEVEL PER SECTOR

CLUSTER 1Knowledge-intensive sectors Highly digitised across most dimensions

CLUSTER 6Highly localised and fragmented sectors Lag across most dimensions


WHAT IS FARM 4.0?


DAIRY FARM 1.0


DAIRY FARM 2.0

http://www.google.at/url?sa=i&rct=j&q=&esrc=s&source=images&cd=&cad=rja&uact=8&ved=0ahUKEwjNsejzvfHUAhWIQBoKHVOyDngQjRwIBw&url=http://www.peter-salvisberg.ch/anbindestall&psig=AFQjCNFgC3TJYjYarqWi5USjw-DfWM-nHA&ust=1499321451443613


DAIRY FARM 3.0


DAIRY FARM 4.0

https://www.youtube.com/watch?v=W-veyQ4eW1M

https://www.youtube.com/watch?v=W-veyQ4eW1M


PRECISION AGRICULTURE IS A FARMING MANAGEMENT CONCEPT

BASED UPON OBSERVING, MEASURING AND RESPONDING

IN CROPS OR ANIMAL REARING.

ADAPTED FROM ZARCO-TEJADA, P., HUBBARD, N., & LOUDJANI, P. (2014). PRECISION AGRICULTURE: AN OPPORTUNITY FOR EU FARMERS—POTENTIAL SUPPORT WITH THE CAP 2014-

2020. JOINT RESEARCH CENTRE (JRC) OF THE EUROPEAN COMMISSION.

PRECISION LIVESTOCK FARMING


2 categories:

ATTACHED

NON-ATTACHED

▪ In-line sensors take measurements in a continuous flow of a product from the cow.

▪ On-line sensors automatically take a sample that is analyzed by the sensor.

ENABLING TECHNOLOGIES - SENSORS

WP 1.3THE FARM


I

TECHNOLOGY ADOPTION# MONITORING SYSTEMS


I

RESEARCH

MARKET PRESENCE

Pilot stage

New to market

Digitalization across all segments:

• Health- and disease control• Lameness

• Mastitis

• Sara

• Performance• Milk yield

• Weight

• Feed intake

• Reproduction

• Comfort

• Individual animal


I


• Automation• Feed control

• Medication

• Performance: • Body weight

• Sorting

• Individual animal & pen


I


• Automation• Feed control

• Medication

• Egg collection

• Performance: • Body weight (step-up scale)

• Flock / House


Overview of parameters monitored

Fig. Appearance of specified keywords in title, abstract or claims of patents in the same sentence as track* or identif* or monitor* or recogni* or measur* or detect* or observ* or locat* or check* or record* or traffic. A larger font size indicates a larger number of patent families referring to this specified keyword

Keyword #patent families

position 504

location 490

weight 244

health 187

production 129

behavior 120

disease 107

body temperature 87

estrus 75

performance 61

http://www.patentinspiration.com/redirect?url=/report/259471dD5c71/analysis/0a375be8e5Db


Main drivers for digitalization in livestock

• Costs and funding for PLF technologies

• Farm consolidation and specialization

• Availability of skilled / willing workforce

• Education of young IT-acquainted farmers

• Need for transparency and traceability

• Availability of internet in rural areas


GEOGRAPHIC


Adoption of digital tools in livestock:


SCIENTIFIC activity related to use of sensors in animal husbandry/livestock farming

INCREASING NUMBER OF PUBLICATIONS SINCE 2002

LARGEST ACTIVITY RELATED TO SENSORS OCCURS IN DAIRY FARMING


SCIENTIFIC activity related to use of sensors in animal husbandry/livestock farming

LARGEST ACTIVITY IN USA, CHINA AND GERMANY


Geographical distribution of patent activity related to plf

largest activity in USA, CHINA and the NETHERLANDS.

The country refers to the location of the applicant (not to the place where the patent has been filed)

#Patent families

Steadily increasing patent activity in the last decade

Increasing patent activity in China since 2005

Increasing patent activity in South Korea since 2013

Year

Main driver USA

Long history in Netherlands since 1998

http://www.patentinspiration.com/redirect?url=/report/259471dD5c71/analysis/A1F8a27e362F


…IMPACT ON

AGRICULTURE PRODUCTION

AND QUALITY

Product quality & traceability

Work-Life-Balance

Environment

Animal welfare

Animal health & performanceCompetition and size


…IMPACT ON

PRODUCT QUALITY AND

TRACEABILITY

Product quality & traceability


E L I S A H P L C L C - M S / M S : S P E C T R U M 3 8 0 ®T L C

T E S T R E P O R T S U R V E Y

Evolution of Mycotoxin Risk Management


Mycotoxin Occurrence 2018 total year

Longest running, most comprehensive in the industryMycotoxin Survey



P R E D I C T I O NT E S T R E P O R T S U R V E Y



Mycotoxin Prediction Tool

• The first global prediction of mycotoxin risk

• For the coming harvest

• Data from >60.000 weather stations

• Corn: Trichothecene, Afla and FUM

Wheat DON


Mycotoxin prediction – how the model works

Fungal Growth in KernelsInfection

Harvest

Mycotoxin Production

Plant

Fungus

Mycotoxin

Sowing + Emergence Vegetative Development SILKING

Spore Production and DispersalWinter Carryover

Winter Spring Summer

(heat units)

Temperature

Humidity

Rainfall

Weather icons from shareicon.com: Daniele De Santis, VisualPharm, weather


Mycotoxin Prediction Tool



P R E D I C T I O NT E S T R E P O R T S U R V E Y

F U T U R E

MACHINE LEARNING



…IMPACT ON

AGRICULTURE PRODUCTION

AND QUALITY

Animal health & performance


DIGITAL TOOLS

for Gut-Health assessment


ANIMAL


ORGANS


TISSUE


CELL


MOLECULAR LEVEL (DNA & RNA)


„OMICs“


Omics technologies & costs

http://de.slideshare.net/shitalpal3/human-genome-project-41108918

National Human Genome Research Institute (NHGRI)

E VO LU T I O N O F S EQ U E N C I N G T EC H N O LO G I ES

ABI commercializes first automated DNA sequencer

Low hanging fruit: cystic fibrosis

mutation identified

Affe launches Gene Expression microarrays First microarray

publication on Arabidopsis

Rise of Genbank databases from DNA sequencing

3700 DNA Analyzer in Human Genome Project: DNA sequencing goes industrial

Human Genome Project & Celera Genomics completes first draft genome

Hapmap project

launched

ILMN launches gene expression arrays

Hapmap 1st

phase data release

Affy & ILMN both launched 100K genotyping arrays

Rise of Genome Wide Association Studies (GWAS)

ILMN bought Solexa, launches GA

Roche GS FLX launched

ABI SOLiD 1.0 launched

The sequencing shake up!

SOLiD 3.0: 100GB out of the box!

ILMN HiSeq 2000 launched

Nanopore DNA sequencing

1981 1986 1989 1991 1994 1998 2000 2002 2003 2005 2006 2007 2008 2009 2010 in the future

Source: http://2016.igem.org/Team:UESTC-software/Description


Metagenomic SEQUENCING


Metagenomic SEQUENCING

Resistome


Oral Resistome


OMICs-Technologies at BIOMIN Research Center

“-omics” and “meta-omics”

We study the expression of all genes in the GIT of the chicken – “transcriptomics”

We identify the genome of all microbes present in the GIT of the chicken – “metagenomics”

We study the metabolome (all metabolites) present either in the GIT and in the blood and organs of the chicken – ”metabolomics”


DIGITAL TOOLS IN R&D


CAN digitalization

• ASSERVA Pig weighing, feed

intake and water intake

• Installed

• First trial undertaken – results

pending


Rumen pH

Levabon® Rumen E Levabon® Rumen E

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Carcass Scan

CT Scan procedure


Lean Animal (Female)Lean scan: Fat scan = 69.96 : 15.61

Fat animal (Male)Lean scan: Fat scan = 55.03 : 30.32

CT Scan Videos Lean (left), higher fat (right)

(Fat is colored yellow)


TO SUMMARIZE...

• Digitalization takes place in livestock – but

it`s less spectacular.

• China, US and EU are leading regions

• Cows > Swine > Poultry

• Many technologies still under development


AUTOMATION DIGITALIZATION

http://www.google.at/url?sa=i&rct=j&q=&esrc=s&source=images&cd=&cad=rja&uact=8&ved=0ahUKEwjNsejzvfHUAhWIQBoKHVOyDngQjRwIBw&url=http://www.peter-salvisberg.ch/anbindestall&psig=AFQjCNFgC3TJYjYarqWi5USjw-DfWM-nHA&ust=1499321451443613

The Digital Revolution and Its Impact on Agriculture Production … · EVOLUTION OF SEQUENCING...

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