The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it...

22
  • date post

    20-Jan-2016
  • Category

    Documents

  • view

    219
  • download

    0

Transcript of The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it...

Page 1: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.
Page 2: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

The Centre for Structural Biology and Structural

ChemistryWhat is the CSBSC?

Why was it established?

• The Australian Synchrotron

• The Replacement Research Reactor

Page 3: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

The Australian Synchrotron

Page 4: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

The Replacement Research Reactor

Page 5: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Small Molecule Structure Determination in the

CSBSCThe School of Chemistry houses one of the world’s best small molecule crystal structure analysis facilities led by Dr Peter Turner:

• Two CCD area detector diffractometers

• Temperature Range 18-400 K

Page 6: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Small Molecule Structure Determination in the

CSBSC

Page 7: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Small Molecule Structure Determination in the

CSBSCDr Peter Turner also leads ScRAPS: small molecule structure determination using synchrotron radiation at APS, Chicago, Illinois

This allows very small and/or poorly diffracting crystals to be analysed.

Page 8: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Powder Diffraction

A/Professor Brendan Kennedy heads our powder diffraction facility. The CSBSC has strong links in powder diffraction with ANSTO and ANBF.

Page 9: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Protein Structure Determination in the

CSBSC

Macromolecular structure determination is based in the School of Molecular and Microbial Biosciences – headed by Dr Mitchell Guss

Page 10: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Structure of PPLO

Page 11: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

The dimer interface

Buried surface area per monomer is 8570 Å2

Page 12: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

NMR structure determination

Not all proteins can be crystallised and then NMR is used to determine structures

NMR also provides complementary information since it is derived from solution data

Page 13: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

NMR structure determination

Page 14: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

NMR structure determination

Page 15: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Charge Density Determination

Structure determination is now so precise that we can determine electron densities and, locating orbitals and determining orbital occupancies

The facilities in Sydney are amongst the very best in the world and will soon get better when we take delivery of a new state-of-the art system

Page 16: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Charge Density Determination

Page 17: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Charge Density Determination

Page 18: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

SRIXE, XANES, and XAFS

The CSBSC has Australia’s largest concentration of expertise in SRIXE, XANES, and XAFS and leads the world in the application of these techniques to bioinorganic chemistry

Metals under consideration include: V, Cr, Fe, Co, Ni, Cu, Zn, As, Mo, Pt

Page 19: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

Elemental maps obtained from an A2780 cell treated with cis-[PtCl4(NH3)2].

KCl Ca

Cu Zn Pt

Determination of Pt distributions using SRIXE

Page 20: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

11520 11540 11560 11580 11600 11620

0.00

0.01

0.02

0.03

0.04

0.05

0.06

0.07

0.08

Pt s

ign

al

Energy, KeV

Pt(II)

11520 11540 11560 11580 11600 11620

0.00

0.02

0.04

0.06

0.08

0.10

0.12

Pt s

ign

al

Energy, KeV

Pt(IV)

Monitoring the fate of Pt(IV) How can we determine where and when Pt(IV) complexes are reduced - XANES spectroscopy

Page 21: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

MicroXANES of Pt obtained from A2780 ovarian cancer cells treated with Pt(IV)

Page 22: The Centre for Structural Biology and Structural Chemistry What is the CSBSC? Why was it established? The Australian Synchrotron The Replacement Research.

AcknowledgmentsCSBSCRichard Christopherson (MMB)Carolyn Dillon (EMU/Chem)Mitchell Guss (MMB)Dai Hibbs (Chem)Brendan Kennedy (Chem)Cameron Kepert (Chem)Peter Lay (Chem)Joel Mackay (MMB)Simon Ringer (EMU)Rob Robinson (ANSTO)Siggi Schmid (Chem)

Money

Dean of Science

PVC (CST)

PVC (Research)

VC (SDF)