Temperature Compensation for Hybrid Devices: Kinesin's Km is Temperature Independent
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Transcript of Temperature Compensation for Hybrid Devices: Kinesin's Km is Temperature Independent
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Hybrid materials
Temperature Compensation for Hybrid Devices:Kinesin’s Km is Temperature Independent**
Robert Tucker, Ajoy K. Saha, Parag Katira, Marlene Bachand,
George D. Bachand, and Henry Hess*
A wide variety of nanodevices integrate biological compo-
nents to provide unique functions. One of the challenges
arising from this hybrid approach is the stabilization of device
operation against temperature changes. The activity of
biological nanomachines, such as enzymes, is strongly
temperature-dependent, often increasing from 50 to 300%
for every 10 8C increase in temperature at saturating substrate
concentrations.[1] Traditionally, temperature is closely con-
trolled in biotechnological processes and microfluidic
devices,[2–4] either to maintain a stable activity or to switch
between active and inactive states of the system. However, in
field-deployable devices it would be desirable to stabilize
internal processes against temperature fluctuations. Inspira-
tion for stabilization strategies is provided by poikilotherm
organisms, which compensate for temperature changes over a
wide range of timescales.[5,6]
Two biological strategies providing instantaneous com-
pensation are of particular interest. On one hand, metabolic
networks can display temperature compensation due to the
existence of feedback loops.[7] The engineering equivalent is
found in the canonical layout for temperature-compensated
electronic circuits.[8] On the other hand, enzymes themselves
can display near constant activity for subsaturating substrate
concentrations ([S]<Km) in a limited temperature range. An
example is lactate dehydrogenase from Alaskan king crab,
whoseMichaelis constant,Km, increases with temperature and
compensates for the increasing vmax value.[9] From an
[�] R. Tucker, A. K. Saha, P. Katira, Prof. H. Hess
Department of Materials Science and Engineering
University of Florida
160 Rhines Hall, Gainesville, FL 32611 (USA)
E-mail: [email protected]
M. Bachand, G. D. Bachand
Biomolecular Interfaces & Systems Department
Sandia National Laboratories
PO Box 5800, MS-1413, Albuquerque, NM 87185 (USA)
[��] Financial support was provided by the DARPA Biomolecular MotorsProgram (AFOSR FA 9550-05-1-0274 & FA 9550-05-1-0366) andthe UF Center for Sensor Materials and Technologies (ONRN00014-07-1-0982). This work was performed, in part, at theCenter for Integrated Nanotechnologies, a US Department ofEnergy, Office of Basic Energy Sciences nanoscale scienceresearch center operated jointly by Los Alamos and SandiaNational Laboratories. Sandia is a multiprogram laboratory oper-ated by Sandia Corporation, a Lockheed Martin Company, for theUnited States Deparatment of Energy’s National Nuclear SecurityAdministration under Contract DE-AC04-94AL85000.
DOI: 10.1002/smll.200801510
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engineering point of view, this approach is preferable because
of its simplicity and is similar to employing a material with
intrinsic temperature compensation such as INVAR steel.[10]
An interesting target for an exploration of this tempera-
ture-compensationmechanism in the context of hybrid devices
is the ATPase kinesin. Kinesin and other motor proteins have
evolved in nature to provide actuation and transport within
cells.[11,12] Recently, motor proteins and their associated
filaments (microtubules in the case of kinesin) have been
employed for the transport of nanoscale cargo in micro-
fabricated structures,[13–21] and it has been shown that these
‘‘molecular shuttle’’ systems[22,23] can be applied to tasks such
as force measurements,[24] surface imaging,[25] single molecule
manipulation,[26] computing,[27] and biosensing.[28–30] Motor-
driven active transport is thus an attractive alternative to
pressure-driven fluid flow and electro-osmotic flow.[31]
Bohm et al.[32] previously reported that the Km values for
porcine kinesin-1 at temperatures of 25 and 35 8C are 66� 10
and 79� 8mM, respectively. Kawaguchi and Ishiwata deter-
mined that the activation energy of bovine kinesin-1 is
50 kJ mol�1, implying a Q10 at saturating ATP concentrations
equal to two.[33] This suggests that the activity change per
10 8C change in temperature for small ATP concentrations is
significantly smaller than two, implying that the increasingKm
partially compensates for the increasing vmax. Similarly, ATP
consumption assays for Thermomyces lanuginosis kinesin-3
determined an activation energy of 94� 9 kJ mol�1, and an
increase in the Km from 42� 7mM at 25 8C to 1.6� 0.3mM at
50 8C.[34] At low ATP concentrations the Q10 is 0.7 and thus
the Thermomyces kinesin activity falls with increasing
temperature despite an increasing activity at saturating
substrate conditions.
Here, we present for the first time detailed measurements
of the temperature dependence of kinesin motor protein
activity at subsaturating substrate concentrations from 19 to
34 8C for both Drosophila kinesin-1 and Thermomyces
kinesin-3. These measurements were undertaken in the
expectation that – similar to other enzymes with applications
in biotechnology[35] – the Km of kinesin would increase with
increasing temperature with beneficial implications for the
design of kinesin motor powered hybrid devices.
Our velocity measurements for microtubules gliding on
Drosophila kinesin-1 (Figure 1) show the expected Arrhenius-
type increase with increase in temperature for a saturating
ATP concentration (1mM), which replicates the data of
Kawaguchi and Ishiwata[33] for saturating ATP concentrations
(1mM) obtained with bovine kinesin (also see [36]).
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Figure 1. A) Microtubule gliding velocity on Drosophila kinesin-1 as a
function of temperature for various ATP concentrations. Open squares
are the data published by Kawaguchi and Ishiwata [33] for 1mM ATP.
B) Microtubule gliding velocity on Thermomyces kinesin-3 as a function
of temperature for various ATP concentrations.
Figure 3. A) Km and B)maximal velocity vmax as function of temperature.
While Km does not change significantly as a function of temperature, the
dependence of vmax on temperature fits an Arrhenius equation well.
Drosophila kinesin-1 – full squares, black; Thermomyces kinesin-3 –
open triangles, gray.
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A plot of velocity as function of ATP concentration for a
series of temperatures (Figure 2) was obtained by interpolat-
ing the data points in Figure 1 for five temperatures for
Drosophila and four for Thermomyces. Fitting these curves
with a Michaelis-Menten equation v([ATP], T)¼ vmax(T)�[ATP]/(Km(T)þ [ATP]) revealed the temperature depen-
dence of the velocity at saturating substrate concentrations
vmax and the Michaelis constant Km (Figure 3). The 34 8C data
point of the Thermomyces data has not been included in the fit
of vmax and Km since the reduced vmax indicates partial
deactivation.
The temperature-dependent vmax parameters were
graphed in Arrhenius plots ln(vmax)¼ vmax, 0� exp(�Ea/RT),
and the activation energies were determined by linear error-
weighted least-square fits to be 53� 5.1 kJ mol�1 (Q10¼ 2.04)
Figure 2. Microtubule gliding velocity as function of ATP concentration
for a series of temperatures obtained by interpolating the data pre-
sented in Figure 1. Lines are fits to Michaelis–Menten functions with
vmax and Km as parameters. A) Drosophila kinesin-1, B) Thermomyces
kinesin-3.
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and 38� 3.3 kJ mol�1 (Q10¼ 1.67) for Drosophila kinesin-1
and Thermomyces kinesin-3, respectively. Independent of
temperature, the Km values were found to be 70� 10mM and
220� 90mM for Drosophila kinesin-1 and Thermomyces
kinesin-3, respectively. Since the Michaelis constant has been
found to be independent of temperature in the case of the two
tested kinesins, temperature compensation of enzyme activity
cannot be achieved at the expense of enzyme turnover by
reducing the substrate concentration.
It is not surprising that our measurements in the
temperature interval from 19 to 34 8C do not replicate the
dramatic increase of the Km of Thermomyces kinesin-3
observed by Rivera et al. in hydrolysis measurements at
55 8C. The tested temperature range is well below the thermal
optimum for this organism. In addition, several changes in the
properties of Thermomyces kinesin-3 were observed at
temperatures above 45 8C.[34] A second preparation of
Thermomyces kinesin-3 showed significantly altered motility
(more interruptions of gliding motion and more stuck
microtubules) and a Km of 175mM at 23 8C, which indicates
that variations between preparations exist.
It is more challenging to reconcile the increase in Km for
porcine kinesin-1 observed by Bohm et al.[32] with our
observations. A possible explanation for Bohm et al. observa-
tion is the depletion of ATP from the solution over time in the
absence of an ATP replenishing system, which caused an
apparent increase of Km of Drosophila kinesin as the cell was
heated over the course of an hour in our initial experiments.
Only the utilization of an ATP regenerating system[37]
prevented this effect in the presented experiments for both
Thermomyces and Drosophila kinesin.
It could be argued that even if kinesin’sKm would increase
in proportion to vmax, the compensation strategy would
require a reduction of substrate concentration to a fraction
of Km, and consequently an undesirable loss in device
performance. However, organisms routinely operate enzymes
at subsaturating substrate conditions,[6] and even for hybrid
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devices it is far from self-evident that the optimum activation
corresponds to themaximum activation. For example, we have
found that a velocity of 200 nm s�1 represents an optimum for
the loading of cargo onto kinesin-driven molecular shuttles
using biotin–streptavidin linkages.[38] Similarly, INVAR steel
sacrifices mechanical properties for a low thermal expansion
coefficient.
For the case of kinesin, we conclude that stabilization
against temperature changes will require the design of a
suitable enzymatic network, adding to the complexity of the
device similar to the recently demonstrated enhanced
robustness of a DNA nanomotor.[39]
Experimental Section
All chemicals are from Sigma–Aldrich (St. Louis, MO) unless
otherwise specified.
Kinesin and microtubule preparation: A kinesin construct
consisting of the wild-type, full-length D. melanogaster kinesin
heavy chain and a C-terminal His-tag was expressed in Escherichia
coli, and purified using a Ni-NTA column as in Reference [40].
T. lanuginosus kinesin was prepared as in Reference [34].
Rhodamine-labeled tubulin (3.2mg mLS1, Cytoskeleton, Denver,
CO) was polymerized at 37 -C for 30min in BRB80 buffer (80mM
PIPES, 1mM EGTA, 2mM MgCl2, pH 6.9) with 1mM GTP (Roche
Diagnostics, Indianapolis IN), 4mM MgCl2, and 5% DMSO, and
subsequently diluted 100-fold into BRB80 with 10mM paclitaxel.
Variable temperature motility assay: A new flow cell was
assembled for each ATP concentration tested, which consisted of
a square coverslip (22T22mm2, FishersFinest no. 1 Fisher
Scientific), double-sided tape as spacer, and a circular coverslip
(15mm diameter, no. 1 Warner Instruments). In the Drosophila
kinesin assays, the inner surfaces of the flow cell were incubated
with a casein solution (0.5mg mLS1 in BRB80) for 5min, and then
a Drosophila kinesin solution (10 nM in BRB80, 0.1mg mLS1
casein, and the desired ATP concentration) for 5min. A motility
solution containing 3.2mg mLS1 microtubules, casein (0.2mg
mLS1), an antifade solution (20mM D-glucose, 20mg mLS1
glucose oxidase, 8mg mLS1 catalase, 10mM dithiothreitol (BioRad
Laboratories, Hercules, CA), an ATP-regeneration system (2000
Units LS1 creatine phosphokinase, 2mM creatine phosphate –
ref.[37]) and ATP (10, 25, 50, 100, 200, or 1000mM) was
introduced, and the edges of the flow cell were sealed with
Apiezon grease to minimize evaporation. In the Thermomyces
kinesin assays, the procedure was identical except the flow cell
was not incubated with casein, the motility solution did not
contain casein, and the ATP concentrations tested were 10, 100,
200, 1000, and 5000mM. The flow cell was placed on the heat
stage (Model RC-20, Warner Instruments), the top coverslip coated
with thermally conductive silver paste and covered with an
aluminum plate, and the ensemble was fastened together with
screws. The temperature of the flow cell was set to the desired
temperature (19, 23, 26, 31, or 34 -C) and automatically regulated
by a temperature controller (Warner Instruments, TC-324B), which
used an electric current and a pair of 20V resistors to maintain a
constant temperature. The microscope objective (Nikon 100T oil
immersion) was heated by a resistive wire (Nichrome 60, Pelican
Wire) powered with a DC regulated power supply (EXTECH1
small 2009, 5, No. 11, 1279–1282 � 2009 Wiley-VCH Verlag Gmb
instruments). The power supply was manually regulated to heat
the objective to the same temperature as the flow cell.
Measurement of temperature: The thermistor from the auto-
matic temperature controller was inserted into the heat stage near
the aluminum plate on top of the flow cell. A second thermocouple
was attached to the objective and read using a multimeter.
Thermocouple readings in the temperature range of interest were
calibrated against an alcohol thermometer.
Measurement of velocity: An Eclipse TE2000-U fluorescence
microscope (Nikon, Melville NY) with a 100T oil objective (NA
1.4), an X-cite 120 lamp (EXFO, Ontario, Canada), a rhodamine
filter cube (no. 48002, Chroma Technologies, Rockingham, VT),
and an iXon EMCCD camera (ANDOR, South Windsor, CT) were
used to image microtubules on the bottom surface of the flow
cells. A series of ten images were taken for each ATP concentration
and temperature, and the gliding velocities of approximately ten
microtubules were measured using image analysis software
(ImageJ v1.37c, National Institutes of Health, USA). The experi-
ment was begun at room temperature (T¼19 -C) and the flow cell
was heated to each new temperature until motility ceased. The
error bars shown in the figures are the standard error of the mean
of the velocity measurements.
Keywords:
drosophila . hybrid materials . Michaelis–Menten kinetics .molecular motors . smart dust
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Received: October 10, 2008Published online: March 19, 2009
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