Supplemental Information. Supplemental Figure S1. Cytotoxic effects of ATRA in NB4 cells with the...
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Transcript of Supplemental Information. Supplemental Figure S1. Cytotoxic effects of ATRA in NB4 cells with the...
Supplemental Information
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Cytotoxic effects of ATRA in NB4 cells
untreated control2μmol/L ATRA1μmol/L ATRA0.5μmol/L ATRA0.25μmol/L ATRA0.125μmol/L ATRA
time
MTS
corr
ecte
d ab
sorb
ance
Supplemental Figure S1. Cytotoxic effects of ATRA in NB4 cells with the concentration of 1μmol of ATRA chosen for the treatment assays in this paper (see text)
Supplemental Figure S2. Top 10 ATRA up-regulated and down-regulated angiogenesis-related transcrpts detected in NB4-derived EVs (see text)
NB4 ATRA cells NB4 ATRA EVs
Supplemental Figure S3. Analysis of significant changes in the expression of angiogenesis-related transcripts between control and ATRA treated NB4 cells and their EVs. A. Venn diagram. B. Tabulated data from the Venn diagram: Common – up- or down-regulated by ATRA in both NB4 cells and their EVs; Contra-regulated – transcripts exhibiting the opposite changes in ATRA treated NB4 cell and EVs; NB4 cells – transcripts selectively up- or down-regulated by ATRA in cells but not in EVs; NB4 EVs – transcripts selectively up- or down-regulated in EVs of ATRA-treated NB4 cells but not in NB4 cells themselves. .
Common up-
regulated transcripts
Common down-
regulated transcripts
Contra-regulated transcripts
NB4 cells ATRA
up-regulated transcripts
NB4 cellsATRA
down-regulated transcripts
NB4 EVsATRA
up-regulated transcripts
NB4 EVsATRA
down-regulated transcripts
CCL2 TGFBR1 FGF1 THBS1 ANGPT2 NRP2 TYMPIL1B BAI1 COL4A3 FGF2 CXCL1 PECAM1
HPSE SERPINF1 KDR ERBB2 PF4 NRP1MDK FN1 COL18A1 PDGFA TEK TIMP2
PTGS1 ANPEP TGFB2 LECT1 CTGF VEGFACXCL10 NOTCH4 IGF1 IFNG SPHK1
IL6 JAG1 CDH5 TNFPLG EFNA1 S1PR1 ITGAVIL8 F3 EGF MMP14
CXCL6 HGF TIMP3 ANGPT1EDN1 MMP9 CCL11FIGF EPHB4 NOS3ANG MMP2 ITGB3
ANGPTL4 FGFR3 ENGTIMP1 IFNA1VEGFC EFNB2
ID1 LEPFLT1
THBS2SERPINE1
A
B
NB4 ATRA EVsNB4 untreated EVs
Common up-
regulated transcripts
Common down-
regulated transcripts
Contra-regulated transcripts
EVs from untreated NB4 cells
up-regulated transcripts
EVs from untreated NB4 cells
down-regulated transcripts
EVs from ATRA treated
NB4 cellsup-regulated transcripts
EVs fromATRA treated
NB4 cells down-regulated
transcripts
FIGF PECAM1 TGFB2 IGF1 PGF CCL2 FN1PLG HGF CXCL10 THBS1 LECT1 IL6 TYMP
EDN1 VEGFA LEP NRP2 MMP2CDH5 SERPINF1 IL8 CXCL1 NRP1MDK TNF PF4 NOTCH4IFNG EFNA1 TEK TGFBR1IL1B ANGPT1 CTGF TIMP2
EFNB2 EGF ANPEPCOL18A1 TIMP3 SPHK1VEGFC CCL11 ITGAVHPSE NOS3 FGFR3CXCL6 ITGB3 JAG1S1PR1 ANG BAI1ENG TIMP1 F3KDR ANGPTL4 EPHB4
PTGS1 MMP9IFNA1 MMP14
COL4A3ID1
FLT1FGF1
THBS2SERPINE1
Supplemental Figure S4. Analysis of significant changes in the expression of angiogenesis-related transcripts between EVs from control and ATRA treated NB4 cells. A. Venn diagram. B. Tabulated data from the Venn diagram: Common – up- or down-regulated in EVs from both control and ATRA treated NB4 cells; Contra-regulated – transcripts exhibiting the opposite change in EVs of control and ATRA treated NB4 cells; EVs from untreated NB4 cells – transcripts selectively up- or down-regulated in EVs of control cells; EVs from ATRA treated NB4 cells – transcripts selectively up- or down-regulated in EVs of ATRA-treated NB4 cells but not in EVs from control cells.
A
B
HUVECs t
ransfe
rred w
ith untre
ated NB4 EV
s
HUVECs t
ransfe
rred w
ith NB4 1µmol/L
ATRA EV
s0
0.10.20.30.40.5
100ug/ml NB4 0.45um EVs
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ecte
d ab
sorb
ance
Supplemental Figure S5. Stimulation of HUVEC survival by NB4 derived EVs was not significantly affected by ATRA treatment. This is consistent with ATRA-related replacement of VEGF with IL-8 in the pro-angiogenic factor expression profile (see text)
ns
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601-700
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300
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1uM ATRA
0.25uM ATO
1uM ATO
particle size (nm)
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umbe
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Supplemental Figure S6. Impact of ATO on vesiculation and survival of NB4 cells. A NTA displayed an altered pattern of cellular vesiculation dominated by the upsurge of larger particles post ATO treatment; B EVs derived from NB4 cells treated with 1µmol/L ATO contained more TF content than those treated with 0.25µmol/L ATO; C TF content in transferred HUVECs which is correspondent with that in NB4 EVs (see text)
A B
C
control 0.25µmol/L ATO
1µmol/L ATO0
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NB4 EVs
TF co
nten
t (pg
/µg
prot
ein)
00.5
11.5
22.5
TF c
onte
nt (p
g/µg
pro
tein
)
** **
ns
*** **
ns
**