Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform...

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Spectral taxonomy: A semi-automated combination of chirped-pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree , Marie A. Martin-Drumel, and Michael C. McCarthy Harvard-Smithsonian Center for Astrophysics

Transcript of Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform...

Page 1: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Spectral taxonomy: A semi-automated combination of chirped-pulse and cavity Fourier transform microwave spectroscopyKyle N. Crabtree, Marie A. Martin-Drumel, and Michael C. McCarthy

Harvard-Smithsonian Center for Astrophysics

Page 2: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Microwave spectroscopy at the CfA

Microwave spectroscopy of reactive molecules: astrochemistry, atmospheric chemistry, and exotic species

200 molecules detected in 20 yearsCations: HNNO+/NNOH+, H2NCO+

Anions: C4H-, C6H-, C8H-

Radicals: HOCO, HO3, C4H, HC3OExotic: Si3, HOON, CH2OO, HOCOH

Page 3: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Cavity FTMspectrometer

Fourier transform spectrometer (5-26 GHz, 1 MHz bandwidth)

Supersonic expansion discharge nozzle

High sensitivity, high resolution

Dilutegaseous

precursors -HV

Page 4: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

CP-FTMW spectrometer

20 GHz, 50 GS/s scope

24 GS/sAWG

+38 dB

+30 dB

18.99 GHzPLDRO

10 MHz RbStandard

LPFilter

0.5-10.5 GHz;4 msec duration

StepAtten

0-70 dB

10 pulses; D 20 mst=0

t 250 ms

• Real-time phase scoring and correction• >1M co-averages routine

Linux DAQsoftware

18.5-8.5 GHz

200W7.5-18 GHz

TWTAData Validity

Monitor

Eccosorb−30 dB

Page 5: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Opportunities and goals Chemical profiling of

reactive gas mixtures with intermediates (Miller-Urey-like experiments)

Conformer, vibrational-state discrimination

Analysis challenges for U-lines: Combine CP and cavity FT spectroscopy

Illustration by Adrian J. Hunter, CC-BY-SA 3.0

Page 6: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Example: C2H2 + CS2 discharge150k gas pulses, 1.5M chirps: ~8.5h @ 5Hz1% C2H2, 1% C2S, 98% Ne1 kV discharge

Page 7: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Example: C2H2 + CS2 discharge

495 features with SNR > 3 Of the strongest 34 features (SNR > 50):

13 artifacts (LO; harmonics; scope spurs) 10 assigned (C3S, c-C3H2, SO2, HC3S, C5S, H2C3S, C2S) 11 unidentified

150k gas pulses, 1.5M chirps: ~8.5h @ 5Hz1% C2H2, 1% C2S, 98% Ne1 kV discharge

Page 8: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Chirped-pulse vs. cavityC

hir

ped

-pu

lse

8.5 h

Page 9: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Chirped-pulse vs. cavityC

hir

ped

-pu

lse

Cavit

y

8.5 h

11 h

Page 10: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Chirped-pulse vs. cavityC

hir

ped

-pu

lse

Cavit

y

8.5 h

11 h

8.5 h

9 s(0.0025 h)

Page 11: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Chirped-pulse vs. cavityC

hir

ped

-pu

lse

Cavit

y

8.5 h

11 h

8.5 h

9 s(0.0025 h)

Bandwidth Intensity accuracy Resolution Frequency accuracy Sensitivity

Bandwidth Intensity accuracy Resolution Frequency accuracy Sensitivity

Page 12: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Chirped-pulse + cavityC

hir

ped

-pu

lse

Cavit

y

Page 13: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Chirped-pulse + cavityC

hir

ped

-pu

lse

Cavit

y

Page 14: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Chirped-pulse + cavityC

hir

ped

-pu

lse

Cavit

y

Page 15: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Automated analysis with cavity

QtFTM: Cavity control software designed for programmatic, automated acquisition

Page 16: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Automated analysis with cavity

Page 17: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Automated analysis with cavity Import list of

frequencies from CP spectrum

Automatically tune cavity to each frequency

Integrate for a duration based on CP intensity

Determine how many lines are present, fit to instrument response function

Remeasure under different conditions (e.g. discharge turned off)

Page 18: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

For each line found in CP spectrum, determine if line disappears when conditions change; classify:

Taxonometric classification

Discharge

Magneticfield

Gas 2present

Gas 1present

Buffer gasimpurities

Gas A cmplxor impurity

Gas

B c

mpl

x

or im

purit

y

Close

d-sh

ell

inte

rmed

/pro

d

Open-shell I/P

Page 19: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Example acquisition: Discharge test

Dischargeenabled

Dischargedisabled

Page 20: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Example acquisition: Discharge test

Page 21: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Example acquisition: Discharge test

Page 22: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Example acquisition: Discharge test

Page 23: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Example acquisition: Discharge test

DC DC DC DC DC DC

Page 24: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Taxonomy flowchart

Yes

Yes No

Yes No Yes No

Y N NY Y N Y N

Y N Y N Y N Y NY N Y N Y N Y N

Detected in cavity?

Discharge?

Magnetic?

CS2 only?

C2H2 only?

Page 25: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Taxonomy flowchart

Yes

Yes No

Yes No Yes No

Y N NY Y N Y N

Y N Y N Y N Y NY N Y N Y N Y N

Detected in cavity?

Discharge?

Magnetic?

CS2 only?

C2H2 only?

795 1328 170 0 0 0 0 0 0 3 0 0 0

28 17 102 13 0 0 3 0

45 115 0 3

160 3

163

Non-detections: 330/495 (past expt: 20%)

Page 26: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Taxonometric classification

Discharge

Magneticfield

C2H2

present

CS2

present0

0

0

00

00

395

7

132817

0

Page 27: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Taxonometric classification

Discharge

Magneticfield

C2H2

present

CS2

present0

0

0

00

00

395

7

132817

0

Next step: cross-correlation within groups using double resonance

Page 28: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

MW-MW double resonance

fFTM

J = 0

J = 2

J = 1fFTM

Page 29: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

MW-MW double resonance

fDR

fFTM

J = 0

J = 2

J = 1fFTM

fDR

Page 30: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

MW-MW double resonance

fDR

fFTM

J = 0

J = 2

J = 1fFTM

fDR

Page 31: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

MW-MW double resonance

fDR

fFTM

J = 0

J = 2

J = 1fFTM

fDR

Page 32: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation

Discharge

Magneticfield

C2H2

present

CS2

present0

0

0

00

00

395

7

132817

0

For each line, look for DR link at every other (unique) frequency# scans Nlines

2/2

Page 33: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation – C2H2 magnetic

Page 34: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation – C2H2 magnetic

Page 35: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation – C2H2 magnetic

No DR

Page 36: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation – C2H2 magnetic

Link!

Page 37: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation – C2H2 magnetic

8/17 lines: c-C3H2

Remainder: unassigned.No obvious linkages

Page 38: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation – C2H2 magnetic

8/17 lines: c-C3H2

Remainder: unassigned.No obvious linkages

Page 39: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation

Discharge

Magneticfield

C2H2

present

CS2

present0

0

0

00

00

395

7

132818

0

Only the 60 strongest lines are shown in this example

Page 40: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation – CS2 + C2H2 discharge

4: C5S4: C4S2: C3S n5=12: C3S n5=12: C13CCS

Remainder: unassigned.Some linkages are likely unassigned vibrational states of molecules above

Page 41: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

DR cross correlation – CS2 + C2H2 discharge

4: C5S4: C4S2: C3S n5=12: C3S n5=12: C13CCS

Remainder: unassigned.Some linkages are likely unassigned vibrational states of molecules above

Page 42: Spectral taxonomy: A semi-automated combination of chirped- pulse and cavity Fourier transform microwave spectroscopy Kyle N. Crabtree, Marie A. Martin-Drumel,

Spectral taxonomy

Future: 2-26 GHz CP coverage