RAMSPOST - Unidade Acadêmica de Ciências Atmosféricas · ramspost.inp – RAMSPOST input file...

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RAMSPOST User's Guide for version 6.0 May 2016 Ricardo Almeida de Siqueira Madeleine Sánchez Gácita Saulo R. Freitas Denis Eiras Email: [email protected] WEB: http://brams.cptec.inpe.br meioambiente.cptec.inpe.br

Transcript of RAMSPOST - Unidade Acadêmica de Ciências Atmosféricas · ramspost.inp – RAMSPOST input file...

Page 1: RAMSPOST - Unidade Acadêmica de Ciências Atmosféricas · ramspost.inp – RAMSPOST input file with the input parameters ... 'nmxx' , In the other case ... BRAMS versions 5.x only

RAMSPOST

User's Guide for version 6.0May 2016

Ricardo Almeida de SiqueiraMadeleine Sánchez Gácita

Saulo R. FreitasDenis Eiras

Email: [email protected]

WEB: http://brams.cptec.inpe.brmeioambiente.cptec.inpe.br

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1. Introduction

RAMSPOST (RAMS-POST processing) is a package for reformatting the output of BRAMS inorder to generate graphs of environmental variables. The BRAMS is a regional model derivedfrom RAMS (http://brams.cptec.inpe.br/) and your output files have different atmosphericinformation (such as the components of the vector wind speed, atmospheric pressure andtemperature), geographic information (as topography) and others.

Once the BRAMS finishes a round, a set of files called "analysis" is generated in a file formatcalled vfm. The vfm is a file format used to generate the input and output files of BRAMSwhere, in the case of analysis, are information of all output variables returned by the model.The RAMSPOST uses the file vfm analysis as input to produce output files corresponding tothe software input format GrADS (Grid Analysis and Display System) for subsequentgraphical display. GrADS is a tool that enables access, manipulation and data visualization ofEarth sciences ( http://cola.gmu.edu/grads/ ).

2. Structure

RAMSPOST is comprised of the main filesMakefileinclude_ramspost.mk ramspost.inp objects.mksrc/anheader.f90 src/ramspost_A.f90 src/ramspost_B.f90 src/ramspost_C.f90 src/ramspost_D.f90

and directories:include src/LIBsrc/util

3. RAMSPOST Installation

a) PHASE I – unzip

Open the linux terminal

Unzip the file→ tar -xzvf ramspost60.tar.gz

b) PHASE II – Compile RAMSPOST

Make modifications on the file include_ramspost_lib.mk, changing the optionsbelow to use the desired compilers and their compilation options. In this

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example, fortran compilers “gfortran” and the C compiler “gcc” are used. Savethe file.

→ gedit include_ramspost_lib.mk

F_COMP=gfortranF_OPTS=-O2 -g -fbacktrace -ffree-form -ffree-line-length-noneC_COMP=gccC_OPTS=-O2 -gLOADER=gfortranLOADER_OPTS=-O2 -g -fbacktrace

Compile it

→ make

c) PHASE III – Checking and running RAMSPOST

check the ramspost60 directory files:

→ ls

NOTE: observe 2 files in particular: ramspost.inp – RAMSPOST input file with the input parameters ramspost_60 – RAMPOST executable file generated by PHASE II

Change the ramspost.inp input file:

FPREFIX='/brams/dataout/ANL/OPQUE'GPREFIX='outfile'

NOTE : In this file you can choose the variables that will be displayed as well as define thegeographical area of interest. Check out the variables descriptor file. For now, watch yourselfin FPREFIX and GPREFIX variables that define the BRAMS output files and the RAMSPOSToutput files, respectively. Save the file ramspost.inp. See item 4 to understand how toconfigure ramspost.inp

Run the executable:

→ ./ramspost_60

a) PHASE IV – GrADS visualization

Open the generated file “outfile_g1.ctl”. This is the GrADS descriptor file. Thefile name is composed by the GPREFIX + “_g1.ctl ”

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Run GrADS ( Press y on the landscape mode question, then press enter ):

→ grads

Open the outfil_g1.ctl:

→ open outfil_g1.ctl

Check the variables and visualize one variable of your interest (e.g. CO):

→ q file

→ set gxout shaded

→ display co

4. RAMSPOST (ramspost.inp) input file description

The ramspost.inp file has the name of the variables responsible for the post-processing ofvfm analysis files, controlling the round of RAMSPOST to generate the input files for Grads.This section presents the key variables of this file. The FPREFIX variable defines the location and the prefix of the analysis files ( BRAMSoutputs ) :

FPREFIX = ' ./ANL/anl '

With this setting, the RAMSPOST will work with the files that have the prefix “anl” and arestored in the directory “ANL”. If the analysis files have another name or are stored in anotherdirectory, change the value of FPREFIX. If only one file will be displayed type your full name.If the BRAMS rounds have different configurations and analysis files are being generated inthe same directory, it is important to change the prefix of the analysis files for each round.This prevents the RAMSPOST interpolate the results of various simulations

NOTE: change the prefix of the analysis files in ramspost.inp to match the RAMSIN ofBRAMS.

AFILOUT = ‘./ANL/anl’ (RAMSIN)FPREFIX = ‘./ANL/anl’ (RAMSPOST)

The NVP and VP variables indicate, respectively, the amount and which variables will be displayed. The following shows one example:

NVP = 54, VP ='t2mJ' , 'td2mJ' , 'slp_metar' ,

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'sfc_press' , 'vtype' , 'tempc2m' , 'tempc' , 'rh' , 'rv' , 'theta' , 'lai' , 'ndvi' , 'w' , 'ue_avg' , 've_avg' , 'smoist' , 'conpcp' , 'acccon' , 'totpcp' , 'tke' , 'h , 'le' , 'rshort' , 'rlong' , 'rlongup' , 'albedt' , 'cape' , 'cine' , 'cloud' , 'liquid' , 'ice' , 'cuthdp' , 'curtdp' , 'slp' , 'khh' , 'khv' , 'sea_press' , 'tempc5m' , 'speed10m' , 'ssc_seas' , 'ssa_seas' , 'bc1_bcar' , 'boc_bcarSRC', 'boc_bcar' , 'occ_ocar' , 'CO' , 'O3' , 'CO_src' , 'NO' , 'nakk' , 'nacc' , 'nboc' , 'nocc' , 'nmxx' ,

In the other case below, 29 variables were defined for viewing. Each variable has a physicalmeaning and it is possible to know the meaning of each one with the help of the output fileproduced by RAMSPOST ( .ctl extension) as seen below:

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CO 20 99 - RAMS : CO Concentration [ppbv ]CO_src 20 99 - RAMS : CO src [kg/kg/da]NO_src 20 99 - RAMS : NO src [kg/kg/da]NO2 20 99 - RAMS : NO2 mixing ratio [ppbv ]O3 20 99 - RAMS : O3 Concentration [ppbv ]NO 20 99 - RAMS : NO Concentration [ppbv ]NMVOCm 20 99 - RAMS : Non methane VOCs mixing ratio RACM [ppbm ]OH 20 99 - RAMS : OH mixing ratio [ppbv ]PMINT 0 99 - RAMS : PM25 vert int [mg/m2 ]PM25 20 99 - RAMS : PM25 Concentration [ug/m3 ]aot550 0 99 - RAMS : AOT 550nm [ ]aot500 0 99 - RAMS : AOT 500nm [ ]vtype1 0 99 - RAMS : vegetation class: patch # 1 [# ]vtype2 0 99 - RAMS : vegetation class: patch # 2 [# ]clear_frac 0 99 - RAMS : clear sky [frac ]pwv 0 99 - RAMS : precipitable water vapor [cm ]tempc2m 0 99 - RAMS : temp - 2m AGL; [C ]tempc 20 99 - RAMS : temperature [C ]tke 20 99 - RAMS : turb kinetic energy [m2/s2 ]h 0 99 - RAMS : sfc sens heat flx [W/m2 ]le 0 99 - RAMS : sfc lat heat flx [W/m2 ]rshort 0 99 - RAMS : rshort [W/m2 ]rlong 0 99 - RAMS : rlong [W/m2 ]rlongup 0 99 - RAMS : rlongup [W/m2 ]albedt 0 99 - RAMS : albedt [ ]ue_avg 20 99 - RAMS : ue_avg [m/s ]ve_avg 20 99 - RAMS : ve_avg [m/s ]rv 20 99 - RAMS : vapor mix ratio [g/kg ]rh 20 99 - RAMS : relative humidity [pct ]smoist1 7 99 - RAMS : soil moisture: patch # 1 [m3/m3 ]smoist2 7 99 - RAMS : soil moisture: patch # 2 [m3/m3 ]

Note that some variables as vtype and smoist generate more than one field to be displayed.This is the reason RAMSPOST change the amount of 29 variables (the ramspost.inp) to 31(in .ctl files). If the NVP indicated value is less than the number of variables included in VP,only the nth NVP variables are displayed.

NOTE: The list of all the variables that can be seen at Appendix A.

The GPREFIX variable works the same way FPREFIX, but it defines the prefix and whereRAMSPOST output files will be stored.

GPREFIX = './POS/pos'

The ANL2GRA variable specifies whether will be produced one GrADS file for each analysistime (option 'ONE') or all analyzes will generate a single GrADS file (option 'ALL')

ANL2GRA = 'ONE'

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The following variables define the grid display range. Note that BRAMS works over a limitedarea grid as defined in their Ramsin. With RAMSPOST you can define a viewing areaprovided it is within the area defined in BRAMS. Thus, LATI variables LATF define the initialand final latitude and LONI, LONF define the initial and final length of view. Typically, thesevariables are defined with values covering the whole world, as shown below. Thus, theRAMSPOST will work in any BRAMS simulation area.

By definition, the display limits that are in ramspost.inp are:

LATI = -90.,

LATF = +90.,

LONI = -180.,

LONF = +180.,

In the example below, note that there are three values for each variable. This is done forsimulations with nested grids in BRAMS. The RAMSPOST considers the same order ofsimulations in BRAMS for nested grids. The number of in Ramsin file is set by NGRIDSparameter.

LATI = -90., -90., -90.,

LATF = +90., +90., +90.,

LONI = -180., -180., -180.,

LONF = +180., +180., +180.,

NOTE: BRAMS versions 5.x only admits one grid! If only one grid was used in the Ramsinfile, or you want to use only one grid on the RAMSPOST, ensure that only one value is set foreach parameter below, otherwise the execution will crash!

For one grid use:

LATI = -90.,

LATF = +90.,

LONI = -180.,

LONF = +180.,

The next variable is related to the projection. The BRAMS works with horizontal bars using

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the polar stereographic projection. Thus, there will be major distortions in the regions nearthe poles. To minimize this distortion, PROJ is the variable that allows the correction ofdistortion effects.

PROJ = ' YES'

The next variables are related to the vertical levels of the grid. The ZLEVMAX variable setsthe amount of vertical levels for each grid of BRAMS (if nested grids are used ). These valuesmust be the same as defined in Ramsin. In the example below, 3 grids are used:

ZLEVMAX = 33,33,1,

ZLEVMAX defines the number of vertical levels to three nested crates. The following values foreach grid is the same as defined in Ramsin. If the amount of vertical levels in RAMSPOST isless than the amount of vertical levels defined in Ramsin, the number of levels defined inRAMSPOST is displayed. Otherwise, the RAMSPOST consider the number of levels defined inRamsin.

For one grid use:

ZLEVMAX = 33,

The IPRESSLEV variable defines the type of vertical level that will be used in the display. Threevalues are possible for this variable:

Zero (0) indicates the vertical level as defined in the original grid BRAMS (Ramsin)

One (1) indicates the vertical levels based on constant values of atmospheric pressure.

Two (2) indicates the vertical levels based on constant altitude values.

If the variable is set to IPRESSLEV 1 or 2, the INPLEVS variable defines the number of verticallevels to be used for display. Remember that IPRESSLEV is set to 0, the original vertical levelsare used.

Since INPLEVS variable was defined, the next step is to define the constant values for theatmospheric pressure (or altitude). These values are defined in IPLEV variable. This variable isdefined as a sequence of values that indicate a level of atmospheric pressure (IPRESSLEV = 1)or altitude values (IPRESSLEV = 2) for displaying the vertical levels. Cases the levels chosenare not in accordance with the levels of the original vertical grid, RAMSPOST interpolates theoriginal values to agree with the levels chosen in RAMSPOST.

IPRESSLEV = 1,

INPLEVS = 8,

IPLEV = 1000, 925, 850, 700, 500, 300, 200, 100,

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In the above example, the vertical levels defined as constant levels of air pressure (IPRESSLEV= 1). 8 indicates that INPLEVS levels are used and sets the IPLEV atmospheric pressure(millibar) for determining the vertical levels. In the next example, the vertical levels were definedin terms of altitude.

IPRESSLEV = 2,

INPLEVS = 8,

IPLEV = 100, 800, 1500, 3000, 5500, 9000, 12000, 16000,

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APPENDIX A – AVAILABLE VARIABLES FOR VISUALIZATION

3D Atmospheric Variables:

The following variables are defined on the 3D-atmospheric grid and may be plotted in eitherhorizontal or vertical cross section. Obviously, many of these variables are dependent on which optionswere activated for a particular run.

3D Velocity and Vorticity Variables

Field Name Description[units] Model VariablesU x-direction wind component [m/s] UP

V y-direction wind component [m/s] VP

u_avg eastward wind component averaged to T point [m/s] UP, VP

v_avg northward wind component averaged to T point [m/s] UP, VP

Zitheta Height PBL [m -sigmaz] THETA, RCP

Eu earth rotated eastward wind component [m/s] UP, VP

Ve earth rotated northward wind component [m/s] UP, VP

ue_avg eastward wind component earth rotated and averagedto T point [m/s]

UP, VP

ve_avg northward wind component earth rotated averaged to Tpoint [m/s]

UP, VP

w z-direction wind component [m/s] WP

wcms z-direction wind component [cm/s] WP

w_avg z-direction wind component averaged to T point [m/s] WP

speed horizontal wind speed averaged to T point [m/s] UP, VP

speed_mph horizontal wind speed averaged to T point [mph] UP, VP

direction horizontal wind direction averaged to T point [deg] UP, VP

relvortx x-component of relative vorticity [rad/s] UP, VP, TOPT

relvorty y-component of relative vorticity [rad/s] UP, VP, TOPT

relvortz z-component of relative vorticity [rad/s] UP, VP, TOPT

absvortz z-component of absolute vorticity [rad/s] UP, VP, TOPT

potvortz z-component of potential vorticity [rad/s] UP, VP, TOPT,THETA

horiz_div horizontal divergence [s^-1] WP

3D Thermodynamic Properties of Air

Field Name Description[units] Model Variablespi Exner function [J/(kg K)] PI

press pressure [mb] PI

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theta potential temperature [K] THETA

dn0 reference state density [kg/m^3] TOPT

pi0 reference state Exner function [J/(kg K)] TOPT

th0 reference state virtual potential temperature [K] TOPT

pert_pressure perturbation pressure [mb] TOPT, PI

tempk temperature [K] THETA, PI

tempc temperature [deg C] THETA, PI

tempf temperature [deg F] THETA, PI

theta_e equivalent potential temperature [K] RV, THETA, PI

theta_v virtual potential temperature [K] THETA, PI

3D Moisture Mass Mixing Rations and Humidity

Field Name Description[units] Model Variablesrv water vapor mixing ratio [g/kg] RV

cloud cloud water mixing ratio [g/kg] RCP

rain rain mixing ratio [g/kg] RRP

pristine pristine ice mixing ratio [g/kg] RPP

snow snow mixing ratio [g/kg] RSP

aggregates aggregates mixing ratio [g/kg] RAP

graupel graupel mixing ratio [g/kg] RPP

hail hail mixing ratio [g/kg] RHP

liquid liquid water mixing ratio [g/kg] RCP, RRP, RGP,Q6,RHP, Q7

ice ice mixing ratio [g/kg] RPP, RSP, RAP, RGP, Q6, RHP, Q7

total_cond total condensate mixing ratio [g/kg] RPP, RSP, RAP, RGP, Q6, RHP, Q7

rtotal total water mixing ratio [g/kg] RV, RCP, RRP, RPP, RSP, RAP,RGP, RHP

rtotal_orig total water mixing ratio (original method) [g/kg] RTP

dewptk dew point temperature [K] RV, PI, T

dewptf dew point temperature [deg F] RV, PI, THETA

Field Name Description[units] Model Variablesdewptc dew point temperature [deg C] RV, PI, THETA

rh relative humidity [percent] RV, PI, THETA

clear_frac clear sky [fraction] RV, PI, THETA

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3D Hydrometeor, CCN, CN, Dep N and nonhygroscopic Aerosol NumberConcentration

Field Name Description[units] Model Variablescloud_concen_mg cloud droplet number concentration [#/mg] CCP

rain_concen_kg rain number concentration [#/kg] CRP

pris_concen_kg pristine ice number concentration [#/kg] CPP

snow_concen_kg snow number concentration [#/kg] CSP

agg_concen_kg aggregates number concentration [#/kg] CAP

graup_concen_kg graupel number concentration [#/kg] CGP

hail_concen_kg hail number concentration [#/kg] CHP

cloud_concen_cm3 cloud droplet number concentration [#/cm^3] CCP, TOPT

rain_concen_m3 rain number concentration [#/m^3] CRP, TOPT

pris_concen_m3 pristine ice number concentration [#/m^3] CPP, TOPT

snow_concen_m3 snow number concentration [#/m^3] CSP, TOPT

agg_concen_m3 aggregates number concentration [#/m^3] CAP, TOPT

graup_concen_m3 graupel number concentration [#/m^3] CGP, TOPT

hail_concen_m3 hail number concentration [#/m^3] CHP, TOPT

ccn_concen CCN number concentration [#/mg] CCCNP

ifn_conc IFN number concentration [#/kg] CIFNP

3D Hydrometeor Diameters

Field Name Description[units] Model Variablescloud_diam cloud droplet mean-mass diameter [microns] RCP, CCP

rain_diam rain mean-mass diameter [mm] RRP, CRP

pris_diam pristine ice mean-mass diameter [microns] RPP, CPP

snow_diam snow mean-mass diameter [mm] RSP, CSP

agg_diam aggregates mean-mass diameter [mm] RAP, CAP

graup_diam graupel mean-mass diameter [mm] RGP, CGP

hail_diam hail mean-mass diameter [mm] RHP, CHP

3D Hydrometeor Temperature, Thermal Energy, Liquid WaterFraction

Field Name Description[units] Model Variablesq2 rain internal energy parameter [J/kg] Q2

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q6 graupel internal energy parameter [J/kg] Q6

q7 hail internal energy parameter [J/kg] Q7

rain_temp rain temperature [deg C] Q2

graup_temp graupel temperature [deg C] Q6

hail_temp hail temperature [deg C] Q7

rain_air_tempdif rain-air temperature difference [K] Q2, THETA, PI

graup_air_tempdf graupel-air temperature difference [K] Q6, THETA, PI

hail_air_tempdif hail-air temperature difference [K] Q7, THETA, PI

graup_fracliq liquid fraction in graupel [ ] Q6

hail_fracliq liquid fraction in hail [ ] Q7

3D Miscellaneous Fields

Field Name Description[units] Model Variablesgeo geopotential height [m] TOPT

tke turbulent kinetic energy [m^2/s^2] TKEP

CO2 CO2 Concentration [ppm] SCLP001

TKU0 CO tend concentration due convection transport DUM3

cuthsh Shallow convective heat hate [K/day] THSRC_SH

curtsh Shallow convective conv moisture rate [g/kg/day] RTSRC_SH

cuthdp Deep convective heat rate [K/day] THSRC

curtdp Deep convective moisture rate [g/kg/day] RTSRC

curidp Convective liquid/ice rate [g/kg/day] D3500

fthrd Radiate heat rate [K/day] FTHRD

khh horizontal scalar mixing coefficient [m^2/s] HKH

khv vertical scalar mixing coefficient [m^2/s] VKH

2D Atmospheric Variables

The following variables are defined as a function of horizontal coordinates only and may only beplotted in horizontal cross section.

Field Name Description[units] Model Variables

tempf2m 2-meter-height air temperature [deg F.] UP, VP, THETA, TOPT, TGP, SCHAR,GSF, PI

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tempc2m 2-meter-height air temperature [deg C.] UP, VP, THETA, TOPT, TGP, SCHAR,GSF, PI

speed10m 10-meter-height wind speed [m/s] UP, VP, THETA, TOPT, GSF, SCHAR,TGP

clear_frac clear sky fraction [fraction] RV, PI, THETA

cloud_frac cloud cover fraction [fraction] RV, PI, THETA

pbl_ht planetary boundary layer height [m] TOPT, TKE

2D Surface Precipitation

Field Name Description[units] Model Variablesaccpr surface accumulated rain [kg/m2] ACCPR

accpp surface accumulated pristine ice [kg/m2] ACCPP

accps surface accumulated snow [kg/m2] ACCPS

accpa surface accumulated aggregates [kg/m2] ACCPA

accpg surface accumulated graupel [kg/m2] ACCPG

accph surface accumulated hail [kg/m2] ACCPH

totpcp surface accumulated resolved precipitation [mm liquid equivalent]

ACCPR, ACCPP,ACCPS,

totpcp_in surface accumulated resolved precipitation

[inches liquid equivalent]

ACCPR, ACCPP,ACCPS,

precip surface accumulated resolved plus

convective precipitation [mm liquid

equivalent]

ACCPR, ACCPP,ACCPS,ACCPA, ACCPG, ACCPH,ACONPR

precip_in surface accumulated resolved plus

convective precipitation [inches liquid

equivalent]

ACCPR, ACCPP,ACCPS,ACCPA, ACCPG, ACCPH,ACONPR

Field Name Description[units] Model Variables

pcprr surface precipitation rate of rain [mm/hr liquidequivalent]

PCPRR

pcprp surface precipitation rate of pristine ice [mm/hr liquid equivalent]

PCPRP

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psprs surface precipitation rate of snow [mm/hr liquidequivalent]

PCPRS

pcpra surface precipitation rate of aggregates [mm/hr liquid equivalent]

PCPRA

pcprg surface precipitation rate of graupel [mm/hr liquidequivalent]

PCPRG

pcprh surface precipitation rate of hail [mm/hr liquid PCPRH

pcpg total surface precipitation falling this timestep[kg/m^2]

PCPG

qpcpg total internal energy of surface precipitation falling this timestep [J/m2]

QPCPG

dpcpg total added depth of surface precipitation falling this timestep [m]

DPCPG

pcprate resolved surface precipitation [mm/hr

liquid equivalent]

PCPRR, PCPRP,PCPRS,PCPRA, PCPRH, PCPRG,CONPRR

pcprate_in resolved surface precipitation [inches/hr

liquid equivalent]

PCPRR, PCPRP,PCPRS,PCPRA, PCPRH, PCPRG,CONPRR

precipr resolved plus convective surface precipitation [mm/hr liquid equivalent]

PCPRR, PCPRP,PCPRS,PCPRA, PCPRH, PCPRG,CONPRR

precipr_in resolved plus convective surface precipitation[inches/hr liquid equivalent]

PCPRR, PCPRP,PCPRS,PCPRA, PCPRH, PCPRG,CONPRR

conpcp cumulus parameterization precipitation rate [mm/hr]

CONPRR

Field Name Description[units] Model Variables

acccon cumulus parameterization accumulated surfaceprecipitation [mm]

CONPRR

cape Cape [J/kg] RV, PI, THETA

cine Cine [J/kg] RV, PI, THETA

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Vertically-integrated atmospheric moisture

Field Name Description[units] Model Variables

vertint_rt vertically-integrated total water mixing ratio [mmliquid equivalent]

TOPT, RCP, RRP,RPP, RSP, RAP, RGP, RHP, RV

vertint_cond vertically-integrated total condensate mixing ratio[mm liquid equivalent]

TOPT, RCP, RRP,RPP, RSP, RAP, RGP, RHP

2D Surface Heat, Moisture, Momentum and Radiative Fluxes

Field Name Description[units] Model VariablesSFLUX_T SFLUX_T [m] SFLUX_T

SFLUX_R SFLUX_R [m] SFLUX_R

SFLUX_W SFLUX_W [m] SFLUX_W

uw surface x-component momentum flux [m2/s2] UW

vw surface y-component momentum flux [m2/s2] VW

wfz surface y-component momentum flux [m2/s2] WFZ

h surface sensible heat flux [W/m2] SFLUX_T, TOPT

le surface latent heat flux [W/m2] SFLUX_R, TOPT

etrans evapotranspiration rate [mm/hr] SFLUX_R, TOPT

etrans_in evapotranspiration rate [in/hr] SFLUX_R, TOPT

umom_flx surface x-component momentum flux [Pa] UW, TOPT

vmom_flx surface y-component momentum flux [Pa] VW, TOPT

wmom_flx surface x-component momentum flux [Pa] SFLUX_W, TOPT

bowen Bowen ratio [ ] SFLUX_T, SFLUX_R

rshort incident surface flux of shortwave radiation [W/m2]

RSHORT

rlong incident surface flux of longwave radiation [W/m2]

RLONG

rlongup upward surface flux of longwave radiation [W/m2] RLONGUP

Field Name Description[units] Model Variablesalbedt grid-cell-averaged surface albedo [ ] ALBEDT

qsc1 qsc1 [???] DUM1

2D Topography and Geographic Values

Field Name Description[units] Model Variables

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topo topography height [m] TOPT

topoa topography height [m] TOPA

lat latitude [deg] GLAT

lon longitude [deg] GLON

2D Miscellaneous Fields

Field Name Description[units] Model Variablesslp_OLD sea level pressure [mb] TOPT, PI, THETA

slp sea level pressure [mb] TOPT, PI, THETA

sfc_div horizontal divergence at surface [1/s] WP

sst water temperature [deg C] TGP

LEAF2 Variables Section

Field Name Description[units] ModelVariablesctprof cloud top height [m] ???

land land fractional area [ ] PATCH_AREA

pfarea patch fractional area [ ] PATCH_AREA

soil_z0_ps, soil_z0_ps soil roughness [m] PATCH_AREA,

vtype, veg_class_bp vegetation class [#] PATCH_AREA,LEAF_CLASS

ndvi ndvi [#] PATCH_AREA,VEG_NDVIC

qveg_class_p, qveg_class_bp q vegetation class [#] PATCH_AREA,DATQ_CLASS

vegfrac, veg_fracarea_ps vegetation fractional area [ ] PATCH_AREA, VEG_FRACAREA

lai, veg_lai_ps green leaf area index [ ] PATCH_AREA,VEG_LAI

Field Name Description[units] ModelVariablestai, veg_tai_ps total leaf area index [ ] PATCH_AREA,

VEG_TAI

net_z0_p, net_z0_ps net roughness [m] PATCH_AREA,NET_Z0

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vegz0, veg_z0_ps vegetation roughness [m] PATCH_AREA,VEG_ROUGH

vegdisp, veg_disp_ps vegetation displacement height [m] PATCH_AREA,VEG_DISP

patch_wetind patch wetness index [ ] PATCH_AREA,WET_INDEX

snowlevels number of snow levels [#] PATCH_AREA,KSNOW

grnd_mixrat_p, grnd_mixrat_ps ground mixing ratio [g/kg] PATCH_AREA,SFC_RS

soil_mixrat_p, soil_mixrat_ps soil mixing ratio [g/kg] PATCH_AREA,SOIL_RS

veg_moist_p, veg_moist_ps vegetation moisture [kg/m2] PATCH_AREA,VEG_MOIST

canopy_mixrat_p,canopy_mixrat_ps canopy mixing ratio PATCH_AREA,CAN_RV

tveg, veg_temp_ps vegetation temperature [C] PATCH_AREA,VEG_TEMP

tcan, canopy_temp_ps canopy temperature [C] PATCH_AREA,CAN_TEMP

Sib-stuffs, itb, CO2 src.

Field Name Description[units] Model Variablessrc_co2 CO2 flux [umol/m**2/sec] SRC_CO2

CO2_SIB CO2 Concentration [ppm] SCLP001

pco2ap CAS CO2 [Pa] pco2ap

pco2m REF LEVEL CO2 [Pa] pco2m

rst stomatal resistance [sec/meter] rst

CO2 CO2 Concentration [ppm] SCLP001, SCLR004

ITB New Diagnostics

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Field Name Description[units] Model Variablesfss sensible heat flux [W/m^2] fss

fws latent heat flux [kg H2O/m^2/sec] fws

assimn canopy net assimilation [mol/m^2/sec] assimn

respg ground respiration [mol/m^2/sec] respg

rstfac1 stress factor 1-leaf to CAS humidity [(-)] rstfac1

rstfac2 stress factor 2-soil moisture[(-)] rstfac2

rstfac3 stress factor 3-temperature[(-)] rstfac3

rstfac4 stress factor 4-combination of factors 1-3[(-)] rstfac4

ect canopy transpiration [W/m^2] ect

eci canopy interception evaporation [W/m^2] eci

egi ground interception evaporation [W/m^2] egi

egs top soil layer evaporation [W/m^2] egs

hc canopy sensible heat flux [W/m^2] hc

hg ground sensible heat flux [W/m^2] hg

capac1 VEGETATION INTERCEPTION STORE Capac1

capac2, capac2_ps GROUND INTERCEPTION STORE [kg/m^2] PATCH_AREA, capac2

ustar, ustar_ps ustar [m/s] PATCH_AREA, USTAR

tstar, tstar_ps tstar [K] PATCH_AREA, TSTAR

rstar, rstar_ps rstar [kg/kg] PATCH_AREA, RSTAR

hp,sens_heat_flux_ps

sfc sensible heat flx [W/m2] PATCH_AREA, USTAR,TSTAR, TOPT

lep, lat_heat_flux_ps

sfc lat heat flx [W/m2] PATCH_AREA, USTAR,RSTAR , TOPT

snow_depth_p,snow_depth_ps

snow depth [m] PATCH_AREA,SNOW_DEPTH

snowcover_p,snowcover_ps

snowcover [kg/m2] PATCH_AREA,SNOW_MOIST

sltex_p, sltex_bp soil textural class [#] PATCH_AREA,SOIL_TEXT

soilq, soilq_ps soil q [J/m3] PATCH_AREA,SOIL_ENERGY

tsoil, soil_temp_ps

soil/sea temp [C] PATCH_AREA, SOIL_ENERGY,SOIL_WATER, SOIL_TEXT

5050_temp_ps,5050_tempf_ps

5050 tempF [F] PATCH_AREA,CAN_TEMP

Field Name Description[units] Model Variables

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smoist, SOIL_WATER_ps

soil moisture [m3/m3] PATCH_AREA,SOIL_WATER

stext, stext_ps soil texture [ ] PATCH_AREA,SOIL_TEXT

SOIL_WATERf_p,SOIL_WATERf_ps

soil moisture frac [m3/m3] PATCH_AREA,SOIL_WATER,SOIL_TEXT

leaf2_moisture leaf2 moisture frac [m3/m3] PATCH_AREA, SOIL_WATER, SOIL_TEXT, SNOW_MOIST, VEG_MOIST, CAN_RV

leaf2_temp Similar to leaf2_moisture [m3/m3] PATCH_AREA, SOIL_WATER, SOIL_TEXT, SNOW_MOIST, VEG_MOIST, CAN_RV

CATT

Field Name Description[units] Model VariablesCO CO Concentration [ppb] SCLP001

src1 Emission 1 [kg/m2/day] scrsc001

src2 Emission 2 [kg/m2/day] scrsc002

src3 Emission 3 [kg/m2/day] scrsc003

src4 Emission 4 [kg/m2/day] scrsc004

src5 Emission 5 [kg/m2/day] scrsc005

src6 Emission 6 [kg/m2/day] scrsc006

src7 Emission 7 [kg/m2/day] scrsc007

src8 Emission 8 [kg/m2/day] scrsc008

COstc CO Conc. without conv. Transp [ppb] SCLP002

COANT CO Concentration ANTRO [ppb] SCLP005

PM25 PM25 Concentration [ug/m3] SCLP003, TOPT

PMINT PM25 vert int [UG/M3] SCLP003, TOPT

aot256 AOT 256nm [ ] AOT

aot296 AOT 296nm [ ] AOT

aot335 AOT 335nm [ ] AOT

aot420 AOT 420nm [ ] AOT

aot482 AOT 482nm [ ] AOT

aot500 AOT 500nm [ ] AOT

aot550 AOT 550nm [ ] AOT

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Field Name Description[units] Model Variablesaot598 AOT 598nm [ ] AOT

aot690 AOT 690nm [ ] AOT

secog GOES-8 ABBA CO emission [kg/m2/day] DUM1

secod Duncan CO emission [kg/m2/day] DUM1

secoant Antropogenic CO emission [kg/m2/day] DUM1

secoe EDGAR CO emission [kg/m2/day] DUM1

scco Emitted CO mass [kg/(m2 day)] QSC1

scpm25 Emitted PM25 mass [kg/(m2 day)] QSC2

sccofe Emitted CO FWB – EDGAR mass [kg/(m2 day)] QSC3

sccoae Emitted CO AWB – EDGAR mass [kg/(m2 day)] QSC4

sccobbe Emitted CO BB – EDGAR mass [kg/(m2 day)] QSC5

sccod Emitted CO Duncan mass [kg/(m2 day)] QSC9

sccol Emitted CO mass – logan [kg/(m2 day)] QSC3

sccoant Emitted CO mass – ANTRO [kg/(m2 day)] QSC9

pwv precipitable water vapor [cm] RV, TOPT

CO2 CO2 Concentration [ppm] SCLP004

TKUO CO tend conc due conv trans [ppb/day] DUM3

TKUOSH CO tend conc due Shallow conv trans[ppb/day] DUM8

Stilt – RAMS Coupling

Field Name Description[units] Model Variablesafxu advect u flux [kg/m^2s] AFXU

afxub averaged adv u flux [kg/m^2s] AFXUB

afxv advect v flux [kg/m^2s] AFXV

afxvb averaged adv v flux [kg/m^2s] AFXVB

afxw advect w flux [kg/m^2s] AFXW

afxwb averaged adv W flux [kg/m^2s] AFXWB

sigw sigma W [ ] SIGW

sigwb averaged sigma W [m/s] SIGWB

tlb averaged Lagr timescale [s] TLB

tl Lagr timescale [s] TL

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Field Name Description[units] Model Variablestkeb average turb kinetic energy [m2/s2] TKEPB

facup1 frac area cov up -deep [ ] FACUP1

facup2 frac area cov up -shal [ ] FACUP2

facdn1 frac area cov down -deep [ ] FACDN1

cfxup1 conv up flux deep [kg/m^2s] CFXUP1

cfxup2 conv up flux shallow[kg/m^2s] CFXUP2

cfxdn1 conv down flux deep [kg/m^2s] CFXDN1

dfxup1 deep conv flx up->env [kg/m^2s] DFXUP1

efxup1 deep conv flx env->up [kg/m^2s] EFXUP1

dfxdn1 deep conv flx env->down [kg/m^2s] EFXDN1

dfxup2 shallow conv flx up->env [kg/m^2s] DFXUP2

efxup2 shallow conv flx env -> up [kg/m^2s] EFXUP2

GRELL cumulus scheme

Field Name Description[units] Model Variableswdm1 Wet deposition mass tracer 1 [kg/m2] wetdep001

wdm3 Wet deposition mass tracer 3 [kg/m2] wetdep003

ierr ierr [ ] XIERR

ierrsh ierr [ ] XIERRSH

upmf updraft mass flux [kg/(m^2 s)] UPMF

dnmf downdraft mass flux [kg/(m^2 s)] DNMF

shmf shallow cum mass flux [kg/(m^2 s)] UPMFSH

lsfth DEEP forcing theta [K/day] lsfth

lsfrt DEEP forcing water vapor [g/kg/day] lsfrt

lsfthsh Shallow forcing theta [K/day] LsfthSH

lsfrtsh Shallow forcing water vapor [g/kg/day] lsfrtSH

topcl Cloud top [ ] XKTOP

jmin Down starts level [ ] XJMIN

cprtint vertint cp rt [kg/m2*s] TOPT, RTSRC

Field Name Description[units] Model Variablesxave X_AVE [ ] DUM5

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xavec1 X_AVE Capmax [ ] DUM5

xavec3 X_AVE Capmax [ ] DUM5

xff0 XFF0 for deep [ ] d2003

xff0sh XFF0 for shallow [ ] d2002

prgr1 precip closure 1 large cap [mm/h] d3004

prgr2 precip closure 1 medium cap [mm/h] d3004

prgr3 precip closure 1 low cap [mm/h] d3004

prw1 precip closure 2 large cap [mm/h] d3004

prw2 precip closure 2 medium cap [mm/h] d3004

prw3 precip closure 2 low cap [mm/h] d3004

prmc1 precip closure 3 large cap [mm/h] d3004

prmc2 precip closure 3 medium cap [mm/h] d3004

prmc3 precip closure 3 low cap [mm/h] d3004

prst1 precip closure 4 large cap [mm/h] d3004

prst2 precip closure 4 medium cap [mm/h] d3004

prst3 precip closure 4 low cap [mm/h] d3004

pras1 precip closure 5 large cap [mm/h] d3004

pras2 precip closure 5 medium cap [mm/h] d3004

pras3 precip closure 5 low cap [mm/h] d3004

xstd X_STD [ ] DUM5

xske x_ske [ ] DUM5

xcur x_cur [ ] DUM5

xmbgr xmbgr [ ] DUM5

xmbw xmbmc [ ] DUM5

xmbst xmbst [ ] DUM5

xmbas xmbas [ ] DUM5

prgr prgr [ ] DUM5

Field Name Description[units] Model Variablesprw prw [ ] DUM5

prmc prmc [ ] DUM5

prst prst [ ] DUM5

pras pras [ ] DUM5

um u mean [m/s] DUM5

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vm v mean [m/s] DUM5

TEB (Town Energy Budget)

Field Name Description[units] Model VariablesTROOF Roof layers temperature [K] T_ROOF

TROAD Road layers temperature [K] T_ROAD

TWALL Wall layers temperature [K] TWALL

TCANYON Canyon Temperature [K] T_CANYON

RCANYON Canyon humidity [g/kg] R_CANYON

TSROOF Roof surface temperature [K] TS_ROOF

TSROAD Road surface temperature [K] TS_ROOF

TSWALL Wall surface temperature [K] TS_WALL

LE_tr Latent heat flux from traffic [W/m2] LE_TRAFFIC

LE_in Latent heat flux from industry [W/m2] LE_INDUSTRY

H_tr Sensible heat flux from traffic [W/m2] H_TRAFFIC

H_in Sensible heat flux from industry [W/m2] H_INDUSTRY

PM25m3 PM25 Concentration [ug/m3] PPM25, TOPT

NOm3 NO Concentration [ug/m3] PNO, TOPT

NOppm NO Concentration [ppmv] PNO

NO2m3 NO2 Concentration [ug/m3] PNO2, TOPT

NO2ppm NO2 Concentration [ppmv] PNO2

COm3 CO Concentration [ug/m3] PCO, TOPT

COppm CO Concentration [ppmv] PCO

Field Name Description[units] Model VariablesSO2 SO2 Concentration [ug/m3] PSO2, TOPT

SO4 SO4 Concentration [ug/m3] PSO4, TOPT

O3m3 O3 Concentration [ug/m3] PO3, TOPT

O3ppm O3 Concentration [ppmv] PO3

VOCS VOCS Concentration [ppmv] PVOC

HO2 HO2 Concentration [ppmv] PHO2

O3P O3P Concentration [ppmv] PO3P

O1D O1D Concentration [ppmv] PO1D

HO HO Concentration [ppmv] PHO

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RO2RO2 Concentration [ppmv]

RO2

RHCORHCO Concentration [ppmv]

PRHCO

APPENDIX B – CHEMICAL VARIABLES LIST

FieldName

Description[units] Model Variables RELACS RACM CB07

COX CO Concentration [ppb] SCLP001 x x x

PRNO2 PRNO2 mix ratio [ppbm]

DCPB, TPAND,HC5P, HC8P, ETEP,OLTP, OLIP, ISOP,APIP, TOLP, XYLP,

CSLP, ACO3P,KETP, ETEP

x x x

PRCO PRCO mix ratio [ppbm]

DCPB, TPAND,APIP, ISOP,DIENP, OLIP,ETEP, HC3P,MACRP, GLYP

x x x

TCCO CO total column [moles/cm^2] SCLP001, TOPT x x x

CO CO Concentration [ppbv] COP x x x

COWD Wet deposition mass CO [kg/m2] COWD x x x

CODD Dry deposition mass CO [kg/m2] CODD x x x

NOWD Wet deposition mass NO [kg/m2] NOWD x x x

O3WD Wet deposition mass O3 [kg/m2] O3WD x x x

O3DD Dry deposition mass O3 [kg/m2] O3DD x x x

FieldName

Description[units] Model Variables RELACS RACM CB07

H2O2WD Wet deposition mass H2O2 [kg/m2] H2OWD x x x

HO2 HO2 Concentration [ppbv] HO2 x x x

CO2 CO2 Concentration [ppbv] CO2P x x x

SO2 SO2 Concentration [ppbv] SO2P x x x

O3 O3 Concentration [ppbv] O3P x x x

TCO3 O3 tropos total column [moles/cm^2]

O3P, TOPT, GLAT x x x

TCNO2 NO2 tropos total column[moles/cm^2]

NO2P, TOPT, GLAT x x x

TCCO CO tropos total column [moles/cm^2]

COP, TOPT ,GLAT x x x

OH OH Mixing Ratio [ppbv] HOP x x x

H2O H2O Mixing Ratio [ppbv.1e6] H2OP x x x

OHD OH Density [molec/cm^3] HOP, THETA, PI x x x

H2O2 H2O2 Mixing Ratio [ppbv] H2O2P x x x

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NO NO concentration [ppbv] NOP x x x

NO2 NO2 mixing ratio [ppbv] NO2P x x x

NO3 NO3 mixing ratio [ppbv] NO3P x x x

N2O5 N2O5 concentration [ppbv] N2O5P x x x

HONO HONO concentration [ppbv] HONOP x x x

HNO3 HNO3 concentration [ppbv] HNO3P x x x

PAN PAN mixing ratio [ppbv] PANP x x x

CH4 CH4 concentration [ppbv] CH4P x x x

PAR PAR concentration [ppbv] PARP x

CRES CRES concentration [ppbv] CRESP x

C2O3 C2O3 concentration [ppbv] C2O3P x

ISPD ISPD concentration [ppbv] ISPDP x

ISOP ISOP concentration [ppbv] ISOPP x

ETH ETH mixing ratio [ppbv] ETHP x x x

MEOH MEOH concentration [ppbv] MEOHP x

ETOH ETOH concentration [ppbv] ETOHP x

OLE OLE mixing ratio OLEP x

FieldName

Description[units] Model Variables RELACS RACM CB07

FORM FORM mixing ratio [ppbv] FORMP x

ALD2 ALD2 mixing ratio [ppbv] ALD2P x

PNA PNA mixing ratio [ppbv] PNAP x

NMVOC Non methane VOCs mixing ratioCB07 [ppbv]

NMVOC = ETHP +PARP + CRESP +C2O3P + ISOPP +ETHP + MEOHP +ETOHP + OLEP +FORMP + ALD2P

x

NMVOCm Non methane VOCs mixing ratioCB07 in mass [ppbm]

NMVOCm = ETHP +PARP + CRESP +C2O3P + ISOPP +ETHP + MEOHP +ETOHP + OLEP +FORMP + ALD2P

x

HC3 HC3 mixing ratio [ppbv] HC3P x

HC5 HC5 mixing ratio [ppbv] HC5P x

HC8 HC8 mixing ratio [ppbv] HC8P x

TOL TOL mixing ratio [ppbv] TOLP x x

XYL XYL mixing ratio [ppbv] XYLP x x

CSL CSL mixing ratio [ppbv] CSLP x

ETE ETE mixing ratio [ppbv] ETEP x

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OLT OLT mixing ratio [ppbv] OLTP x

OLI OLI mixing ratio [ppbv] OLIP x

DIEN DIEN mixing ratio [ppbv] DIENP x

ISO ISO mixing ratio [ppbv] ISOP x

API API mixing ratio [ppbv] APIP x

LIM LIM mixing ratio [ppbv] LIMP x

ALD ALD mixing ratio [ppbv] ALDP x x

KET KET mixing ratio [ppbv] KETP x

MACR MACR mixing ratio [ppbv] MACRP x

MGLY MGLYP concentration [ppbv] MGLYP x x

HCHO HCHO mixing ratio [ppbv] HCHOP x

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FieldName

Description[units] Model Variables RELACS RACM CB07

NMVOC Non methane VOCs mixing ratioRACM [ppbv]

NMVOC = ETHP +HC3P + HC5P +HC8P + ETEP +OLIP + OLTP +DIENP + TOLP +XYLP + CSLP +HCHOP + ALDP +KETP + MACRP +MGLYP + GLYP +ORA1P + ORA2P

x

NMVOCm Non methane VOCs mixing ratioRACM in mass [ppbm]

NMVOCm = ETHP +HC3P + HC5P +HC8P + ETEP +OLIP + OLTP +DIENP + TOLP +XYLP + CSLP +HCHOP + ALDP +KETP + MACRP +MGLYP + GLYP +ORA1P + ORA2P

x

VOC VOCs mixing ratio RACM [ppbv]

VOC = ETHP + HC3P+ HC5P + HC8P +ETEP + OLIP +OLTP + DIENP +TOLP + XYLP +CSLP + HCHOP +ALDP + KETP +

MACRP + MGLYP +GLYP + ORA1P +ORA2P + CH4P

x

ALKA ALKA mixing ratio [ppbv] ALKAP x

ALKE ALKE mixing ratio [ppbv] ALKEP x

ARO ARO mixing ratio [ppbv] AROP x

BIO BIO mixing ratio [ppbv] BIOP x

CRBO CRBOP mixing ratio [ppbv] CRBOP x

NMVOC Non methane VOCs mixing ratioRELACS [ppbv]

NMVOC = ETHP +ALKAP + ALKEP +AROP + BIOP +HCHOP + ALDP +KETP + CRBOP +ORA1P + ORA2P

x

NMVOCm Non methane VOCs mixing ratioRELACS in mass [ppbm]

NMVOCm = ETHP +ALKAP + ALKEP +AROP + BIOP +HCHOP + ALDP +KETP + CRBOP +ORA1P + ORA2P

x

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FieldName

Description[units] Model Variables RELACS RACM CB07

VOC VOCs mixing ratio RELACS [ppbv]

VOC = ETHP +ALKAP + ALKEP +AROP + BIOP +HCHOP + ALDP +KETP + CRBOP +ORA1P + ORA2P +

CH4P

x

NOSRCBB NO_bburn_SRC NO_bburn_SRC x x x

NO_src NO src [kg/kg/day]

NO_src =NO_bburn_SRC +NO_antro_SRC +NO_bioge_SRC

x x x

CO_src CO src [kg/kg/day]

CO_src =CO_bburn_SRC +CO_antro_SRC +CO_bioge_SRC

x x x

PM25_src PM25 src [kg/kg/day] bburn2_SRC x x x

SO4_src SO4 src [kg/kg/day] urban2_SRC x x x

PM10_src PM10 src [kg/kg/day] bburn3_SRC x x x