Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383...

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Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 [email protected] Hours: anytime after 4 pm

Transcript of Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383...

Page 1: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Pharmacy 325

Infrared (IR)Spectroscopy

Dr. David WishartRm. 2123

Ph. [email protected]: anytime after 4 pm

Page 2: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Lecture Notes Available At:

• http://redpoll.pharmacy.ualberta.ca

• http://www.pharmacy.ualberta.ca/pharm325/

Page 3: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Electromagnetic Spectrum

Page 4: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Electromagnetic Spectrum

Co

smic

X-r

ay

Ult

ravi

ole

t

Vis

ible

Infr

ared

Mic

row

ave

Rad

io

(nm)

Hz 1021 1018 1015 1012 109 106

10-3 1 200 500 106 109 1012

Page 5: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Different Types of IR

• Near Infrared– 1-3 (wavelength) used in particle and

composition analysis

• Middle Infrared– 3-50 (wavelength) primarily used in

compound characterization

• Far Infrared– 50-1000 (wavelength) not used

Page 6: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR in Everyday Life

Thermal Imaging (Thermography)

Page 7: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR in Everyday Life

Night Vision Goggles

Page 8: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR Spectroscopy

aspirin

Page 9: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Principles of IR

• Measures heat or thermal energy in a molecule or a system

• IR spectroscopy measures the absorption of light due to bond stretching or bending

• IR energies correspond to the energies of bond stretching in most molecules

• Different types of bonds absorb at different energies (frequencies)

Page 10: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Principles of IR

h

Low Energy High Energy

Page 11: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Different Types of Vibration

Symmetric Stretch Asymmetric Stretch Wagging

Page 12: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Different Types of Vibration

Rocking Twisting Scissoring

Page 13: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

The IR Equation

h = k(m1 + m2) m1 m2

m2

m1

k

obsO-H > N-H > C-H > C-O > C-C > C-F

obsC=C > C=C > C-C

Page 14: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR Characteristic Vibrations

Page 15: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR Units of Measurement

• Energies ~ 1-10 kcal/mol or 0.1 - 1.0 eV

• Wavelength ~ 1000 nm - 100,000 nm

• Frequency ~ 10 - 10 Hz

• Wave number (1/) ~ 200 - 4000 cm-1

12 15

= c/Frequency is proportional to wave number

Page 16: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

UV vs. IR

• IR has narrower peaks relative to UV• IR yields more information than UV• IR allows you to collect data on solids,

liquids and gases• UV is more quantitative than IR• UV spectra are easier/faster to collect• UV samples are easier to prepare• UV spectrometers are cheaper

Page 17: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR vs. UV

230 240 250 260 270 280 290A

bs

orb

an

ce

Page 18: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

A Modern FTIR instrument

FT = Fourier Transfrom

Page 19: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

path “a”

path

“b”

a b

moving mirror

fixed mirror

detector

50% beamsplitter

x

sourcesample

j- stop

FTIR Schematic

Page 20: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

= 0

for = m, get constructive interference

is “retardation”

=/2

for = (m+1/2), get destructive interference

Page 21: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Mirror travel

Frequency, (cm-1)

x = 0

x = 0

4004000

Interferogram:

Single beam spectrum of air:

FT

100%

H2O H2OCO2

Page 22: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Fourier Transformation

F() = f(t)e dtt

Converts from units of time to units of frequency

Page 23: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Principles of FTIR

Page 24: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR Sample Preparation

• Most flexible system for analyzing all 3 states of matter (solid, liquid, gas)

• “Neat” (analysis of liquids/oils)

• Pellet (analysis of solids)

• Thin Cell (analysis of dissolved solid samples - solutions)

• Long Cell (analysis of gases)

Page 25: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Preparing a “Neat” IR Sample

Page 26: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Preparing a KBr Disk

Page 27: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Apparatus for KBr Disk

Page 28: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Pressed Disk Preparation

• Use powdered, dry KBr, KI, CsI• Mix reagent with KBr in 1:10 ratio• Grind material to 2 diameter using

agate mortar or vibrating ball mill (Wig-L-Bug amalgamator)

• Place into die and press to 30 tons/in2 using hand press or wrench + nut

• Remove carefully, handle with gloves

Page 29: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR Liquid Sample Cell

Page 30: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR Gas Sample “Cell”

Page 31: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Analyzing IR Spectra

• Look for C=O peak (1820-1660 cm-1)• If C=O check for OH (3400-2400 cm-1)

– indicates carboxylic acid

• If C=O check for NH (3500 cm-1)– indicates amide

• If C=O check for C-O (1300-1000 cm-1)– indicates ester

• If no OH, NH or C-O then ketone

Page 32: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Analyzing IR Spectra

• If no C=O check for OH (3600-3300 cm-1)– indicates alcohol

• If no C=O check for NH (3500 cm-1)– indicates amine

• If no C=O & no OH check C-O (1300 cm-1)– indicates ether

• Look for C=C (1650-1450 cm-1) then aromatic

Page 33: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

IR Characteristic Vibrations

Page 34: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Sample IR Spectrum #1

A - CO-OH stretch (3000)

B - CH stretch (2800)

C - C=O ester (1757)

D - C=O carboxy (1690)

E - C=C aromatic (1608)

F - C=C aromatic (1460)

Page 35: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Sample IR Spectrum #2

A

BC

C CH3

O

Acetophenone

A) C=O (1730) B) C=C aromatic (1590) C) C-H aromatic (3050)

Page 36: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Applications

• Qualitative “fingerprint” check for identification of drugs

• Used for screening compounds and rapid identification of C=O groups

• Can be used to characterize samples in solid states (creams and tablets)

• Can detect different crystal isoforms (polymorphs)

• Water content measurement

Page 37: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Applications

• Analysis of urine and other biofluids (urea, creatinine, protein)

Page 38: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Applications• Used in non-invasive measurement

of glucose

Page 39: Pharmacy 325 Infrared (IR) Spectroscopy Dr. David Wishart Rm. 2123 Ph. 492-0383 david.wishart@ualberta.ca Hours: anytime after 4 pm.

Applications of Near IR (NIR)

• Quality control of pharmaceutical formulations

• Determination of particle size

• Determination of blend uniformity

• Determination or identification of polymorphic drugs