Mercuric resistance genes in gram-positive oral bacteria
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Transcript of Mercuric resistance genes in gram-positive oral bacteria
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FEMS Microbiology Letters 236 (2004) 213–220
www.fems-microbiology.org
Mercuric resistance genes in gram-positive oral bacteria
Paul Stapleton a,*, Rachel Pike b, Peter Mullany b, Victoria Lucas b, Graham Roberts b,Robin Rowbury a, Michael Wilson b, Hilary Richards a
a Department of Biology, University College London, Gower Street, London, UKb Department of Microbiology, Eastman Dental Institute, University College London, Grays Inn Road, London, UK
Received 7 April 2004; received in revised form 23 May 2004; accepted 25 May 2004
First published online 9 June 2004
Abstract
Mercury-resistant bacteria isolated from the oral cavities of children carried one of two types of merA gene that appear to have
evolved from a common ancestor. Streptococcus oralis, Streptococcus mitis and a few other species had merA genes that were very
similar to merA of Bacillus cereus strain RC607. Unlike the B. cereus RC607 merA gene, however, the streptococcal merA genes were
not carried on Tn5084-like transposons. Instead, comparisons with microbial genomic sequences suggest the merA gene is located on
a novel type II transposon. Coagulase-negative staphylococci and Streptococcus parasanguis had identical merA genes that represent
a new merA variant.
� 2004 Federation of European Microbiological Societies. Published by Elsevier B.V. All rights reserved.
Keywords: Mercury resistance; Oral bacteria; Viridans group streptococci; Coagulase-negative staphylococci
1. Introduction
The predominant mechanism of mercury resistance in
bacteria is the enzymatic reduction of mercury, Hg2þ to
Hg0 by mercuric reductase enzyme. The mercuric re-
ductase is encoded by the merA gene, which usually
forms part of a mer operon consisting of genes coding in
addition for proteins involved in mercury transport
(MerC, MerE, MerF, MerP and MerT) [1–3], the reg-ulation of mer gene expression (MerR and MerD) [4,5],
and in some cases mercuric lyase enzymes conferring in
combination with MerA, organomercuric resistance
(MerB1, MerB3, and MerB3 in Bacillus cereus RC607)
[6,7]. For comprehensive reviews on mercury resistance
see [8–11].
In Gram-positive bacteria a merA gene identified in
B. cereus RC607 isolated in Boston Harbour, USA[12,13] is widely distributed amongst the Bacillaceae
* Corresponding author. Present address: Microbiology Group,
School of Pharmacy, 29-39 Brunswick Square, London WC1N 1AX,
UK. Tel.: +44-20-7753-5848; fax: +44-20-7753-5942.
E-mail address: [email protected] (P. Stapleton).
0378-1097/$22.00 � 2004 Federation of European Microbiological Societies
doi:10.1016/j.femsle.2004.05.041
[7,12–17] and has also been found in a Clostridium bu-
tyricum isolate. Nucleotide sequence similarities of these
genes with the B. cereus RC607 merA gene vary between
76.8% and 100%. All are chromosomally located with
the exception of the merA gene from Exiguobacterium
sp. TC38-2b, which is located on plasmid pKLH3 [14].
Two other merA variants from Gram-positive bacteria
have also been described; one originally identified on
plasmid pI258 in Staphylococcus aureus [18] and anotherlocated on the chromosome of Streptomyces lividans
[19]. Staph. aureus and Streptomyces lividans merA genes
share 58.8% and 35.2% nucleotide sequence similarities
with the RC607 merA gene, respectively. Mercuric re-
ductase genes amongst Gram-positive bacteria are not
consistent in length; nucleotide sequences vary from
1641 to 1896 bp for the Bacillaecae group, 1644 bp for
Staph. aureus, and 1425 bp for S. lividans. Variations inmerA gene lengths are primarily caused by alterations at
the 50end of the gene coding for an N-terminal domain,
of approximately 70 amino acids, that shares homology
with the mercury transport protein, MerP [20]. Shorter
gene sequences such as the merA from Steptomyces
lividans code for a protein that lacks the N-terminal
. Published by Elsevier B.V. All rights reserved.
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214 P. Stapleton et al. / FEMS Microbiology Letters 236 (2004) 213–220
domain, intermediate length sequences code for proteins
with one N-terminal domain (e.g. plasmids of Staph.
aureus), while long sequences code for MerA proteins
that have a duplication of the N-terminal domain (e.g.
chromosome of B. cereus RC607). Function of theN-terminal domain remains to be resolved but a metal
binding motif within the domain is thought to bind
mercury and assist translocation of mercury to the cat-
alytic site [11].
The widespread distribution of homologous merA
genes amongst the Bacillaceae is due in part to their
location on type II transposons (i.e. transposons flanked
by short inverted repeat sequences rather than insertionsequence elements) [7,14,21]: movement of the transpo-
son from the chromosome onto plasmids facilitates
distribution of mercury resistance between bacterial
species [21]. All of the transposons carrying RC607-like
merA genes are homologous and consist of 38 bp in-
verted repeat sequences, a res site, and transposase
(tnpA) and resolvase genes encoding enzymes involved
in translocation of the element [21,22]. Usually the genesinvolved in transposition lie upstream from the mer
operon. The genetic organisation of the mer determinant
of B. cereus RC607 carried on transposon Tn5084
consists of two operons (given in brackets); merB1,
(merR1, merE, merT, merP, merA), (merR2, merB2,
merB3), where merB1, merB2 and merB3 are genes en-
coding organomercurial lyases with different substrate
specificities, and merR1 and merR2 encode regulatoryproteins that control expression of genes within the two
operons [13,22,23].
Dental amalgam fillings are a major source of human
exposure to mercury. Oral bacteria resistant to mercury
have been reported [24]. However, the mechanism of
mercury resistance in this group has not been elucidated.
The aim of this study was to determine the nature of
mercuric resistance genes in oral bacteria.
2. Materials and methods
2.1. Bacterial strains
Mercury-resistant oral bacteria, from the saliva and
plaque samples of 100 children (age range: 5–15 years),were isolated on Mueller–Hinton agar containing 40 lMHgCl2 [25,26]. Isolates were identified to species level
with the API identification system (bioM�erieux UK
Limited, Basingstoke, United Kingdom) and by carbo-
hydrate substrate analysis [27].
2.2. DNA techniques, PCR and DNA–DNA hybridisation
DNA extraction was performed with a Gram-positive
DNA isolation kit (Flowgen, Ashby de la Zouch, United
Kingdom). Southern blotting to Nylon N+ membranes
(Amersham Biosciences) and DNA–DNA hybridisation
with digoxygenin-labelled probes was carried out ac-
cording to the manufacturer’s instructions (Roche Mo-
lecular Biochemicals, Lewes, United Kingdom).
Digoxygenin-labelled merA probes were prepared fromStaph. aureus NCTC8325 (carrying pI258) and B. cereus
RC607 DNA by PCR by the incorporation of alkali-
stable digoxygenin-labelled dUTP (Roche Molecular
Biochemicals) in the amplification mixture. PCR am-
plification was performed as described by Ausubel et al.
[28] with Dynazyme II thermostable polymerase
(Flowgen) and an annealing temperature of 50 �C. Prim-
ers used for the specific detection of themerA genes were:BamerAF1 [50-CATCATCGGTTCTGGTGGAG-30]and BamerAR1 [50-AGTTGTCCTAATTCCATGCC-
30] for the detection of B. cereus RC607 merA gene (537
bp product; DNA sequence positions 2737–3273 of
GenBank Accession Number AF138877; merA from
RC607), and SamerAF1 [50-CGACGATAAGACGA-
TACAAG-30] and SamerAR1 [50-TCCAAATTGA-
ACCGCTAACG-30] for the detection of the merA genefrom Staph. aureus (927 bp product; DNA sequence
positions 3744–4671 of GenBank Accession Number
L29436; merA from pI258). Primers capable of ampli-
fying both the Bacillus spp. and staphylococcal merA
genes were also used in this study, these were: UmerA-F
[50-CTGGTTGTGAAGAACAT-30] and UmerA-R [50-TCCTTCTGCCATTGTTA-30]. Due to a sequence
repeat at the 50 end of the RC607 merA gene theseprimers give two products (1556 and 1792 bp; DNA
sequence positions 2259–4051 and 2496–4051 of Gen-
Bank Accession Number AF138877; merA from RC607)
with RC607 but give a single product with merA genes
that lack the repeat (e.g. merA on pI258 from S. aureus
gives a 1535 bp product; DNA sequence positions 3194–
4728 of GenBank Accession Number L29436).
2.3. Ligation-assisted PCR
Ligation-assisted PCR was carried out on HindIII
digested DNA cloned into the HindIII site of pMOS-
Blue (Amersham Biosciences). Primers, INVF (50-TCGGCATGGAATTAGGACAAC-30) located within
the merA gene (DNA sequence positions 3252–3272 in
GenBank Accession Number AF138877; merA forRC607) and T7P (50-TAATACGACTCACTATAG-
GG-30) located within the vector (T7 promoter site) were
used to amplify the region downstream from the merA
gene.
2.4. DNA sequencing and sequence analysis
DNA sequencing was performed with the aid of anApplied Biosystems automated fluorescent sequencer
(model 373A). Sequence homology searches were per-
formed with the BLAST algorithms provided by the
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P. Stapleton et al. / FEMS Microbiology Letters 236 (2004) 213–220 215
National Center for Biotechnology Information (http://
www.ncbi.nlm.nih.gov). Preliminary sequence data for
Streptococcus mitis and Streptococcus gordonii was ob-
tained from The Institute for Genomic Research
through their website at http://www.tigr.org. Clustal Vsequence alignments were performed with the MegAlign
program (DNASTAR, Inc).
The Accession numbers for the DNA sequences
determined in this study are: AJ582645 (Streptococcus
oralis 1601A); AJ582646 (S. mitis 26410); AJ582647
(Streptococcus parasanguis 18110); AJ582648 (S. para-
sanguis 17910); and AJ582649 (Staphylococcus sp.
1863A).
3. Results
3.1. Mercury-resistant bacteria isolated from the oral
cavity
415 non-duplicated mercury-resistant bacteria werecollected. The predominant group of bacteria to be
isolated were viridans group streptococci (83%), of
which, S. oralis was the most common species. Coagu-
lase-negative staphylococci were the next most frequent
bacterial group isolated (3%) followed by Staph. aureus
(1%).
3.2. Mercury resistance in viridans group streptococci
3.2.1. Detection and sequencing of the merA gene
PCR amplification with primers specific for the merA
genes from Staph. aureus plasmid, pI258 (SamerAF1and SamerAR1) and Bacillus spp. (BamerAF1 and Ba-
merAR1) (Fig. 1(a)) were used to screen the mercury-
resistant isolates. Of 76 mercury-resistant viridans group
streptococcal isolates screened, 59 (mostly S. oralis and
S. mitis) gave positive amplification products with
primers specific for the merA from Bacillus spp. No
amplification products were obtained with primers spe-
cific for the merA from Staph. aureus. DNA sequencingof the PCR products (536 bp) from 6 isolates indicated
that the strains carried a merA gene that was identical in
this region to the merA gene from B. cereus RC607.
Primers capable of amplifying a larger proportion of
the merA gene (UmerA-F and UmerA-R; Fig. 1(a)) were
used to amplify the merA gene from two isolates,
S. mitis 26410 and S. oralis 1601A. These primers are
capable of amplifying the merA genes from both RC607and pI258. Due to a sequence repeat at the 50 end of the
RC607 merA gene these primers give two products (1555
and 1792 bp) with RC607 but give a single product
(�1555 bp) with merA genes that lack the repeat (e.g.
merA on pI258 from S. aureus) (Fig. 1(a)). Both S. mitis
26410 and S. oralis 1601A gave a single amplification
product. DNA sequence analysis revealed that the merA
core sequences of S. mitis 26410 and S. oralis 1601A had
99% and 100% identity, respectively, with the merA se-
quence of RC607 (Fig. 1(a)). S. mitis 26410 differed from
that of RC607 at three nucleotide positions; 4025G!T,4026C!G and 4078T!C (RC607 numbering scheme,
Accession Number AF138877). In contrast to the core
sequences, the 50 ends of the merA genes had much lower
sequence similarity (68% identities) with the B. cereus
RC607 merA gene (Fig. 1(b)). The deduced amino acid
sequence for this region had 63% sequence similarity
when compared with the MerA protein sequence of
B. cereus RC607.Comparison of the merA sequences of S. mitis 26410
and S. oralis 1601A with the DNA sequences of unfin-
ished microbial genomes determined at The Institute of
Genomic Research revealed 99% identity with the se-
quences of S mitis NCTC 12261 (contig 101; nucleotide
positions 5362–7020) and S. gordonii (contig 2383; nu-
cleotide positions 2325–4220). The complete length of
the merA gene from S. gordonii is predicted to be thesame length as the B. cereus RC607 merA gene (1896
bp), while the merA genes from S. mitis NCTC 12261
and the isolates identified in this study are predicted to
be 1659 bp in length. The 50 ends of the S. mitis NCTC
12261 and S. gordonii merA genes are identical to those
from S. mitis 26410 and S. oralis 1601A (Fig. 1(a)
and (b)).
3.2.2. merA is not carried on Tn5084 or related transpo-
sons in viridans group streptococci
The mer operon in B. cereus RC607 is carried on a
class II transposon (Tn5084) [22]. Since the merA geneof the isolates in this study shared high sequence ho-
mology with the merA from B. cereus RC607, DNA
from 28 isolates was screened by DNA–DNA hybridi-
sation for the presence of the Tn5084 transposase (tnpA)
and resolvase (tnpR) genes (data not shown). None of
these isolates carried these genes, indicating that the
merA gene in the isolates was not carried on Tn5084. To
investigate whether the regions upstream and down-stream from the merA gene was consistent with the mer
operon structure of B. cereus RC607, both the merR1
and merB3 genes were examined. The merR1 gene is the
principle regulatory gene the controls the expression of
merA and is invariably located upstream from the merA
gene. The merB3 gene codes for an organomercurial
lyase that confers resistance to organomercurial com-
pounds such as methylmercury chloride and ethylmer-cury chloride. This gene does not form part of all mer
operons from Gram-positive bacillus spp but is located
downstream from merA on Tn5084 in B cereus RC607.
Hybridisation studies showed that the 28 isolates in-
vestigated above did not carry merR1 and merB3 genes
homologous to those found on Tn5084 (data not
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Fig. 1. (a) Comparison of the merA sequences from B. cereus RC607, oral bacteria, and plasmid pI258 from S. aureus. The merA from B. cereus
RC607 consists of a core sequence and a repeat sequence at the 50 end of the gene (denoted I and II). Diagonal hatching indicates 50 ends with lower
identities (68%) to RC607. S. parasanguis, S. agalactiae, and coagulase-negative staphylococci have core merA sequences (indicated in black) with
low similarities (66%) to the RC607 sequence. The percentage similarities of the merA genes are given in the table. Binding positions of the PCR
primers used in this study and lengths of the corresponding amplification products are also given (indicated by arrows). Nucleotides positions for
RC607 and S. aureus pI258 are from GenBank Accession Numbers AF138877 and L29436, respectively. (b) Clustal V nucleotide sequence alignment
of the 50 ends of the merA genes from Bacillus spp. and streptococci. Nucleotides identical to the merA sequence from B. cereus RC607 are shaded
black. The numbers above the sequence alignment correspond to the RC607 merA sequence (Accession Number AF138877). The Accession numbers
for the other nucleotide sequences are: Y09024 (B. cereus TA32-5); Y10855 (Bacillus licheniformis FA6-12); Y09906 (Bacillus macroides TC47-5);
Y09907 (B. megaterium MK64-1); and AE014249 (S. agalactiae 2603V/R). S. mitis NCTC 12261 and S. gordonii merA operons were con-
structed from sequence data provided by TIGR (S. mitis, contig 101; nucleotide positions 5401–6956 and S. gordonii, contig 2383; nucleotide
positions 2325–4220).
216 P. Stapleton et al. / FEMS Microbiology Letters 236 (2004) 213–220
shown). The presence of other mer genes on Tn5084
(merE, merT, merP, merR2, merB1 and merB2) was not
investigated.
3.2.3. Analysis of the region downstream of themerA gene
Ligation-assisted PCR was used to amplify the region
downstream from the merA gene of two isolates, S. mitis
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P. Stapleton et al. / FEMS Microbiology Letters 236 (2004) 213–220 217
26410 and S. oralis 1601A. Genomic DNA was cut with
the restriction endonuclease HindIII, which cuts within
the merA gene and the flanking DNA region. The DNA
fragments were ligated into the HindIII site of plasmid
vector pMOSBlue, which was subsequently used as atemplate. PCR was used, with primers INVF (located
within the merA gene) and T7P (located within the
vector), to amplify the region downstream from the
merA gene. With this technique 388- and 500-bp were
amplified beyond the end of the merA gene for S. oralis
1601A and S. mitis 26410, respectively (Fig. 2). DNA
sequence analysis indicated that homology of S. oralis
1601A and S. mitis 26410 with the B. cereus RC607 mer
operon ended at the translational stop codon (TAA) of
merA. No mer-related genes were found downstream
from merA and the DNA sequence identity between
strains 26410 and 1601A ended after 108-bp (Fig. 2). In
strain 1601A, a gene coding for a novel transposase
could be identified 159-bp downstream from merA.
Examination of finished and unfinished microbial ge-
nome sequences revealed that the same transposase genewas present at identical positions downstream from the
merA genes of S. mitis NCTC12261, S. gordonii and
Streptococcus agalactiae 260 V/R. Comparison of the
transposase sequence of S. mitis NCTC12261 with the
DNA sequence amplified from S. mitis 26410 indicated
Fig. 2. DNA sequences downstream from the merA genes of (a), S. oralis 16
Number AJ582646). The filled triangles indicate the positions where sequenc
associated with the deletion point is enclosed in a box. Positions of the right
genes are also underlined. Letters above the DNA sequence are one-letter a
that the first part of the transposase gene was present
downstream from merA but a deletion had occurred
removing most of the gene (Figs. 2 and 3).
3.2.4. merA gene from S. parasanguis
Strains that were PCR-negative with primers specific
for the B. cereus RC607 and Staph. aureus merA genes
were subjected to further PCR amplification with
primers UmerA-F and UmerA-R. All S. parasanguis
isolates that were previously PCR-negative gave positive
amplification products with these primers (6 isolates,
35% of previously PCR-negative isolates). The remain-
ing isolates, mainly Streptococcus vestibularis and
Streptococcus salivarius were PCR-negative. DNA se-
quencing of the merA gene from two S. parasanguis
isolates, 18110 and 17910 revealed that both isolates had
identical merA genes. The 50 ends of the genes wereidentical to those found in the other streptococcal iso-
lates (Fig. 1). However, the merA gene had low overall
sequence similarity with the B. cereus RC607 merA gene
(67%) (Fig. 1(a)). Comparison of the S. parasanguis se-
quences with the merA sequences from the recently
published genome sequence of S. agalactiae [29] (Gen-
Bank Accession Numbers AE014249, AE014282, and
AE014283) revealed an identical match.
01A (Accession Number AJ582645) and (b), S. mitis 26410 (Accession
e identity is lost between the two sequences. The sequence, CGACAT,
-hand inverted repeat (IR-R), and the positions of start and end of the
bbreviations for the deduced amino acids coded for by the sequence.
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Fig. 3. Schematic representation of the genetic organisation of mer operons and flanking sequences of streptococci. Diagrams of S. mitis NCTC
12261 and S. gordonii mer operons were constructed from sequence data provided by TIGR (S. mitis, contig 101; nucleotide positions 5401–6956 and
S. gordonii, contig 2383; nucleotide positions 2325–4220). Sequence data for S. oralis 1601A and S. mitis 26410 was determined in this study (Ac-
cession Numbers AJ582645 and AJ582646, respectively). The diagrams of S. agalactiae 260 V/R were drawn from information provided in GenBank
data files (Accession Numbers AE014249, AE014282, and AE014283). The sequences of the left (IR-L) and right (IR-R) inverted repeat sequences of
a putative type II transposon proposed to carry the merA genes are indicated. Direct-repeat sequences associated with the movement of the
transposon are boxed. The directions of the arrows associated with the genes indicate the relative directions of gene transcription.
218 P. Stapleton et al. / FEMS Microbiology Letters 236 (2004) 213–220
3.2.5. Mercury-sensitive isolates
It was noted that some mercury-sensitive isolates
(15%) gave positive hybridisation with the Bacillus spp.
merA probe. Only one strain, 20210 gave a PCR productafter PCR amplification with primers specific for the
Bacillus spp. merA gene. The product was approxi-
mately 150 bp smaller than the expected size and DNA
sequencing confirmed that PCR product was a trun-
cated form of the merA gene. None of the mercury-
sensitive isolates gave amplification products with the
primers UmerA-F and UmerA-R, or primers specific for
the staphylococcal merA gene.
Fig. 4. Southern blot and hybridisation with a merA probe of AccI
digested genomic DNA from staphylococci and related bacteria pro-
bed with a merA probe prepared from Staph. aureus NCTC8325. Lane
1, molecular size markers; lane 2 Staph. aureus NCTC6571; lane 3,
Staph. aureus 2763O; lane 4, coagulase-negative staphylococcus
2733O; lane 5, coagulase-negative staphylococcus 1863A; lane 6, co-
agulase-negative staphylococcus 1864A; lanes 7, Staph. aureus 1864O;
lanes 8, CNS 1881A; lane 9, Stomatococcus mucilagenosus 2784O.
3.3. Coagulase-negative staphylococci
The merA genes from mercury-resistant oral coagu-
lase-negative staphylococcal isolates were investigated
by PCR and DNA–DNA hybridisation. DNA–DNA
hybridisation indicated that the coagulase-negative
staphylococcal isolates did not carry merA genes highlyhomologous to the merA from Staph. aureus (Fig. 4).
Amplification with the primers UmerA-F and UmerA-R,
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P. Stapleton et al. / FEMS Microbiology Letters 236 (2004) 213–220 219
followed by DNA sequencing revealed that coagulase-
negative staphylococcus 1863A (GenBank Accession
Number AJ582649) had a merA gene identical to those
found in S. parasanguis and S. agalactiae. This sug-
gested that horizontal gene transfer had occurred be-tween these two species, although the mechanism of
transfer remains to be determined.
4. Discussion
Analysis of the merA sequences from bacteria iso-
lated from the oral cavity of children has shown thatthey carry one of two types of merA gene variants.
The merA genes from S. parasanguis and coagulase-
negative staphylococci (CNS) isolated in this study are
identical to the merA genes (merA-1 and merA-2)
found in S. agalactiae 2603V/R for which the com-
plete genome sequence is available [29]. This variant
of the merA gene will be referred to as ‘‘variant-1’’.
The second gene variant, ‘‘variant-2’’, typically foundin S. oralis and S. mitis, has high DNA sequence
similarity (99–100% identity) with core sequence the B.
cereus RC607 merA but the 50 end of the gene has
lower sequence similarity (68% identity) suggesting the
gene has a mosaic structure. Interestingly, the 50 endsof variants 1 and 2 are identical despite their core
merA sequences having low similarities (66% identity)
and both variants have similar sequences flanking themerA genes, suggesting that both genes have evolved
from a common ancestor. The absence in the oral
isolates of merR and merB3 genes homologous to
those found within RC607 suggests that they do not
carry RC607-like mer operons. Consequently, gene
variant-2 probably evolved from variant-1 by DNA
recombination with RC607-like merA DNA.
A mosaic merA gene has been described previouslyin Bacillus megaterium MK64-1 [21], where the 50 and30 ends of the RC607-like merA gene have undergone
recombination with DNA from Bacillus firmus [21].
Neither the 50 nor 30 ends of variant-1 or variant-2
shared significant homology with the corresponding
DNA regions in B. megaterium MK64-1 suggesting
that the merA genes are of independent origin.
B. cereus RC607-like merA genes are found on classII transposons (transposons flanked by inverted repeat
sequences rather than insertion sequence elements), lo-
cated on chromosomes and plasmids, and distributed
amongst Bacillus spp., Exiguibacterium spp. and Clos-
tridia [14,21,22]. Hybridisation of genomic DNA from
the oral isolates with probes for the transposase and
resolvase genes of Tn5084, which carries the mer operon
in B. cereus RC607 was unsuccessful. This suggests thatthe merA genes in the oral isolates were not carried on
Tn5084-like transposons. Analysis of the regions
downstream of the variant-2 merA genes from two iso-
lates in this study indicated that, unlike the mer operons
on Tn5084-like transposons, no additional mer-related
genes were found downstream from merA. The lack of
merR2 and merB3 genes downstream from merA is acharacteristic of the mer operon from B. megaterium
MK64-1 [21]. However, the transposase gene that mo-
bilises the mer operon in MK64-1, which differs from the
Tn5084 transposase gene, could not be identified in the
two oral isolates. Instead, part of the sequence coding
for a novel transposase belonging to the ISL3 family was
found downstream of merA in S. oralis 1601A. This
transposase gene is also pre-sent downstream from themerA genes of S. mitis NCTC 12261, S. gordonii and S.
agalactiae 260 V/R suggesting that the ISL3-like gene
may form part of a transposon capable of mobilising the
merA gene (Fig. 3). Inspection of the sequences of S.
mitis NCTC 12261 and S. agalactiae 260 V/R reveals a
24-bp inverted repeat sequence that forms the ends of
putative transposon carrying a merR gene, a merA gene
and a transposase gene. An 8-bp direct repeat sequence(GATTTTTT) consistent with movement of the trans-
poson could also be identified in the sequence from S.
agalactiae 260 V/R (Fig. 3). In S. mitis 26410 most of the
transposase gene had been deleted so it is not possible
say whether the putative transposon played a part in the
movement of the merA gene in this isolate.
In this study, the merA gene could be detected in
some mercury-sensitive isolates. Previous studies haveshown that mercury-sensitive Gram-positive environ-
mental isolates can carry functional merA and merR
genes but are thought to contain non-functional genes
coding for proteins involved in mercury transport
[10,30]. All the merA-positive isolates tested, both
mercury-sensitive and mercury-resistant, lacked the
genes coding for proteins involved in mercury trans-
port suggesting this was not the reason for the ob-served differences in mercury susceptibilities. One oral
isolate in this study carries a truncated merA gene,
which would explain why the isolate was mercury-
sensitive. The other mercury-sensitive isolates were not
investigated in detail but they may also carry trun-
cated merA genes. Absence of functional mercury
transport proteins may explain why mercury-resistant
isolates (merA-positive) in this study exhibited only a2- to 4-fold decrease in mercury-susceptibility com-
pared to mercury-sensitive isolates (merA-negative).
The presence of RC607-like DNA in merA variant-2
indicates a link between the flow of genetic information
from environmental bacteria to oral isolates. In addi-
tion, the presence of identical merA genes in oral
S. parasanguis and coagulase-negative staphylococcal
isolates suggests that horizontal gene transfer has oc-curred between them probably within the oral cavity.
Further work is necessary to establish the mechanism of
merA gene transfer between the isolates.
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220 P. Stapleton et al. / FEMS Microbiology Letters 236 (2004) 213–220
Acknowledgements
This work was funded by the Medical Research
Council (grants G9810729 and G9810341). The authors
wish to thank E.S. Bogdanova (Russian Academy ofSciences, Moscow, Russia) and J. Hobman (The Uni-
versity of Birmingham, Birmingham, United Kingdom)
for providing strains used as controls. Sequencing of
S. mitis NCTC12261 by TIGR was accomplished with
support from the National Institute of Health and the
National Institute of Dental and Craniofacial Research.
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