Marine Lifewatch meeting 3-5 June 2014
-
Upload
anton-van-de-putte -
Category
Science
-
view
416 -
download
2
Transcript of Marine Lifewatch meeting 3-5 June 2014
![Page 1: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/1.jpg)
The Antarctic Biodiversity Portal!contributions to a marine virtual
lab Anton Van de Putte
Biodiversity.aq RBINS
HCMR, Crete
![Page 2: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/2.jpg)
Antarctic Treaty « In order to promote international cooperation in scientific investigation in Antarctica, […], Scientific observations and results from Antarctica shall be exchanged and made freely available. » Our vision:"Antarctic biodiversity data are open, linked, useful, interoperable and safe.
![Page 3: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/3.jpg)
Background • Born during the IPY as Census of
Antarctic Marine Life as the data, visualization and analysis component
• Free and open access to biodiversity data
• SCAR-MarBIN and ANTABIF projects
• Science, conservation and management
• Networked community developments
![Page 4: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/4.jpg)
Architectural design & developments!
WWW DATA
AFG
mARS
ATLAS
IPT
share
![Page 5: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/5.jpg)
WWW.BIODIVERSITY.AQ • General website • latest news • contact • sponsors • governance • resources • projects
![Page 6: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/6.jpg)
IPT.BIODIVERSITY.AQ
IPT (meta)DATA
DWC-‐A
Data paper
HIT
![Page 7: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/7.jpg)
DATA HIT
AADC
DATA.BIODIVERSITY.AQ AMD IPT
Taxonomy
RAMS Environmental
AADC
OCCURRENCE (INTERNAL WEB SERVICE)
TAXONOMY (INTERNAL WEB SERVICE)
![Page 8: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/8.jpg)
DATA
AFG.BIODIVERSITY.AQ
AFG
Expert Provided Content (text & images)
Occurrence Taxonomy
![Page 9: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/9.jpg)
![Page 10: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/10.jpg)
ATLAS.BIODIVERSITY.AQ • Biogeographic Atlas of the
Southern Ocean • Editors: De Broyer & Koubbi • Redo of Hedgepeth 1969
Folio • Predictive approach • Static and dynamic versions • Modelization loops are ready
![Page 11: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/11.jpg)
Environmental layers
• Slope • Bathymetry • Chlorophyll • Distance to the continent • Distance to bird colonies • Distance to ice • Distance to shelf • Distance to canyon • Floor temperature • ... • + • ANTABIF Occurrence records
![Page 12: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/12.jpg)
• R-functions GUI for BRT and GDM
• https://github.com/jiho/atlasr
![Page 13: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/13.jpg)
45°S
55°S
65°S
75°S
0°
30°W 30°E
150°E150°W
180°
60°E60°W
90°E90°W
120°E120°W
LegendValue
High : 0.994270
Low : 0.001170
45°S
55°S
65°S
75°S
0°
30°W 30°E
150°E150°W
180°
60°E60°W
90°E90°W
120°E120°W
Legendeuphau_pres-absEuphausia6
0
1
![Page 14: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/14.jpg)
mARS.BIODIVERSITY.AQ
![Page 15: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/15.jpg)
IPT
MiMARKS mARS
mARS.BIODIVERSITY.AQ Sequence set summary
![Page 16: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/16.jpg)
mARS white paper . • Step 1: Data description and discovery • Step 2: Habitat and Microbial Sequence
Metadata Entry – (MiMARKS Data Standard; Microbial_Sequence_Set_Template)
• Step 3: Georeferenced-molecular sequence database integration
• Step 4: Processing batch sequence data –Circum-Antarctic microbial diversity
![Page 17: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/17.jpg)
Continued efforts • Application of informatics techniques to
biodiversity information • Improved integration, presentation, discovery,
exploration and analysis. • Yields new ways to view and analyse existing
information, as well as predictive models for information that does not yet exist.
• Allows data-intensive biodiversity research and applications (e.g. in conservation)
![Page 18: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/18.jpg)
Privileged partners
Partners
Associate partners
![Page 19: Marine Lifewatch meeting 3-5 June 2014](https://reader033.fdocuments.us/reader033/viewer/2022042723/53f00e398d7f72874b8b7eb1/html5/thumbnails/19.jpg)
InternationalOceanographicData and InformationExchange
Friends