Marbank Marbank -a marine biobank located in Tromsø, Norway Kjersti Lie Gabrielsen.
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Transcript of Marbank Marbank -a marine biobank located in Tromsø, Norway Kjersti Lie Gabrielsen.
MarbankMarbank-a marine biobank a marine biobank locatedlocated in Tromsø, Norway in Tromsø, Norway
Kjersti Lie Gabrielsen
Main objectives MarbankMain objectives Marbank
The mission of Marbank is to The mission of Marbank is to provide an accessible national provide an accessible national repository of frozen marine repository of frozen marine biological samples, collected and biological samples, collected and maintained under rigorously maintained under rigorously controlled conditionscontrolled conditions
Marbank CollectionMarbank Collection
The material to be archived and The material to be archived and stored in the Marbank repository stored in the Marbank repository will include genetic and biological will include genetic and biological material from marine material from marine microorganisms, plankton, algae, microorganisms, plankton, algae, invertebrates and vertebrates invertebrates and vertebrates
Marbank Marbank samplessamples
Organism/tissue
Water extract
Organic extract
DNA/ RNA (cDNA)
Storage
Photos: Klara Stensvåg, NFH
Marbank StorageMarbank Storage
- LLNN22-tanks and freezers -tanks and freezers
with temperature control/ with temperature control/ alarmalarm systems systems
Uniform and high quality storage of Uniform and high quality storage of samples at low temperaturessamples at low temperatures
Marbank CustomersMarbank Customers
Marbank will offer services for Marbank will offer services for researchers, legislation and industryresearchers, legislation and industry
Access to samples and data information Access to samples and data information from Marbank will be regulated by a set from Marbank will be regulated by a set of policiesof policies
R&D institutions and industry will gain R&D institutions and industry will gain access to the material after description access to the material after description of scientific purposesof scientific purposes
Database MarbankCollection
Administrative data:
-Policies-Loan/transactions
Taxonomy/physical characteristics:
-Specie-Name/Common name-Determined by-Weight-Length-Sex/age-Reference literature
Field data:
-Date-GIS/location-Field prep-Field notes-Hazard-Storage-Voucher
Storage:
-Tissue/extract-Preservation-Initial weight-Current weight-# individuals -Freezer name etc.-Position in archive (section, rack, box)
Digital images:
-Photo-Video
Literature:-Articles etc.
External Server MarbioCustomersWeb-site
Marbank strategies for collection of Marbank strategies for collection of marine samplesmarine samples
Initiation of dedicated Marbank surveys/ Initiation of dedicated Marbank surveys/ hiring of research vessels hiring of research vessels
Marbank participation on surveys Marbank participation on surveys initiated by other institutionsinitiated by other institutions
Receipt of living or frozen samples Receipt of living or frozen samples collected by researchers from other collected by researchers from other institutionsinstitutions
Marbank Marbank initiators/initiators/collaboratorscollaborators
University of Tromsø University of Tromsø Institute of Marine ResearchInstitute of Marine Research Norwegian Polar InstituteNorwegian Polar Institute Norwegian Institute of Fisheries and Norwegian Institute of Fisheries and
Aquaculture ResearchAquaculture Research
Collaboration Marbank - Collaboration Marbank - MarbioMarbio
CollectionCollection ExtractionExtraction
Bioactivity Bioactivity screeningscreening
FractionationFractionationPurificationPurification
MarbankMarbank
MarbioMarbio
DatabaseDatabase
Marbio: Medium/high throughput Marbio: Medium/high throughput screening of novel bioactivitiesscreening of novel bioactivities
Biomek NX S8 W/ gripper
1 meter ORCA
CO2
incubator
ShakerPlate reader
Plate washer
Platehotel BC
Anti-tumorAnti-tumor Anti-bacterial Anti-bacterial Anti-viralAnti-viral Anti-inflammatory Anti-inflammatory Immunostimulatory Immunostimulatory Enzymes
SummarySummary Marbank will build and maintain a Marbank will build and maintain a
collection of marine samplescollection of marine samples
The frozen tissue samples and extracts will The frozen tissue samples and extracts will represent the genetic material of a wide represent the genetic material of a wide range of species range of species
The collection will be an archive of The collection will be an archive of molecular biodiversity and will make molecular biodiversity and will make unique and important research materials unique and important research materials available to the scientific communityavailable to the scientific community