manner harnessing reactive oxygen species in an iron ... · Kholodovychb, Hanan D. Alqahtanib,...
Transcript of manner harnessing reactive oxygen species in an iron ... · Kholodovychb, Hanan D. Alqahtanib,...
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SUPPORTING INFORMATION:Small molecule anticancer agents kill cancer cells by
harnessing reactive oxygen species in an iron-dependent manner
Sara R. Fedorkaa, Kevin Soa, Ayad Al-Hamashia, Ibtissam Gadb, Ronit Shahb, Veronika
Kholodovychb, Hanan D. Alqahtanib, William R. Taylorb* and L. M. Viranga Tillekeratnea*
aDepartment of Medicinal and Biological Chemistry, College of Pharmacy and Pharmaceutical Sciences, The University of Toledo, 2801, W. Bancroft Street, Toledo, Ohio 43606, United Statesb Department of Biological Sciences, College of Natural Sciences and Mathematics, The University of Toledo, 2801, W. Bancroft Street, Toledo, Ohio 43606, United States*These authors contributing equally to this work and are co-corresponding authors.*These authors contributing equally to this work and are co-corresponding authors.
[email protected]@utoledo.edu
List of Contents:Page number
1H and 13C NMR Spectra1) (5R, 6S) and (5S, 6R)-6-hydroxy-3,3,5,7-tetramethyl-oct-1-en-4-one ((+/-) 8) S32) (4R,5S)-5-(tert-butyldimethylsilyloxy)-2,2,4,6-tetramethyl-3-oxoheptanal ((+/-)9) S43) (3S,4R,7S)-3,7-bis-(tert-butyldimethylsilyloxy)-2,4,6,6-tetramethyldec-9-en-5-one
and (3R,4S,7S)- 3,7-bis-(tert-butyldimethylsilyloxy)-2,4,6,6-tetramethyldec-9-en-5-one (10 and 10a) S5
4) (3S,6R,7S)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanal (11) S6
5) (3S,6S,7R)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanal (11a) S76) (3S,6R,7S)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanoic acid (7) S87) (3S,6S,7R)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanoic acid (7a) S9
8) 2-methyl-4-bromothiazole (13) S109) 2-(methylthio)-4-bromothiazole (14) S11
10) 2-(piperidin-1-yl)-4-bromothiazole (15) S1211) 2-(phenylethynyl)-4-bromothiazole (16) S1312) trimethylsilyl)ethynyl)-4-bromothiazole (17) S1413) 2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enone (20a) S15
Electronic Supplementary Material (ESI) for Organic & Biomolecular Chemistry.This journal is © The Royal Society of Chemistry 2018
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14) 2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enone (20b) S1615) 2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enone (20c) S1716) 2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enone (20d) S1817) 2-methyl-3-(2-((trimethylsilyl)ethynyl)thiazol-4-yl)cyclopent-2-enone (20e) S1918) 3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enone (21) S2019) 3-(2-(1H-1,2,3-triazol-4-yl)thiazol-4-yl)-2-methylcyclopent-2-enone (22) S2120) 2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enone (20f) S2221) (S)-2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enol (6a) S2322) (S)-2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enol (6b) S2423) 2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enol (6c) S2524) (S)-2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enol (6d) S2625) (S)-3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enol (6e) S2726) (S)-2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enol (6f) S2827) (3S,6R,7S)-((S)-2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-
4,4,6,8-tetramethyl-5-oxononanoate (5a) S2928) (3S,6R,7S)-((S)-2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enyl) 3,7-
dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5b) S3029) (3S,6R,7S)-((R)-2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-
dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate and (3S,6R,7S)-((S)-2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5c) S31
30) (3S,6R,7S)-((S)-2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5d) S32
31) (3S,6R,7S)-((S)-3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5e) S33
32) (3S,6R,7S)-((S)-2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5f) S34
33) (R)-3-(2-Ethynylthiazol-4-yl)-2-methylcyclopent-2-enol (23) S35
34) 2-Methyl-3-(2-((trimethylsilyl)ethynyl)thiazole-4-yl)cyclopent-2-enol (24) S36
35) 3-(2-Ethynylthiazol-4-yl)-2-methylcyclopent-2-enone oxime (25) S37
36) Supplementary Figure S1. Initial assessment toxicity induced by S38
compound 5e and analogues
37) Supplementary Figure S2. Time lapse microscopy of NCI-H522 cells exposed to 6e S39.
38) Supplementary Figure S3. Effect of compound 6e (10M) on mitochondrial function S39
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1H and 13C NMR Spectra
1H NMR of (5R, 6S) and (5S, 6R)-6-hydroxy-3,3,5,7-tetramethyl-oct-1-en-4-one ((+/-) 8)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
6.876.82 3.162.042.02 1.071.00
13C NMR of (5R, 6S) and (5S, 6R)-6-hydroxy-3,3,5,7-tetramethyl-oct-1-en-4-one ((+/-) 8)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
219.
02
141.26
115.
33
77.5
477
.22
76.9
1
76.66
51.7
0
40.76 30.63
23.1822.93
19.02
10.89
(+/-)O
HO
8
S4
1H NMR of (4R,5S)-5-(tert-butyldimethylsilyloxy)-2,2,4,6-tetramethyl-3-oxoheptanal ((+/-)9)
9.5 9.0 8.5 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
15.78 6.766.481.28 1.251.00
13C NMR of (4R,5S)-5-(tert-butyldimethylsilyloxy)-2,2,4,6-tetramethyl-3-oxoheptanal ((+/-)9)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
212.
63
200.72
77.5
477
.23
77.12
76.9
1
61.3
6
46.36
33.34
20.6219.87
18.6
2
16.40 15.70
-3.43
O
TBSO
O
H
(+/-)9
S5
1H NMR of (3S,4R,7S)-3,7-bis-(tert-butyldimethylsilyloxy)-2,4,6,6-tetramethyldec-9-en-5-one and (3R,4S,7S)- 3,7-bis-(tert-butyldimethylsilyloxy)-2,4,6,6-tetramethyldec-9-en-5-one (10 and 10a)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0 -0.5ppm
24.76 10.862.992.18 1.881.051.00 0.99 0.800.60
13C NMR of (3S,4R,7S)-3,7-bis-(tert-butyldimethylsilyloxy)-2,4,6,6-tetramethyldec-9-en-5-one and (3R,4S,7S)- 3,7-bis-(tert-butyldimethylsilyloxy)-2,4,6,6-tetramethyldec-9-en-5-one (10 and 10a)
\240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
219.
0921
8.48
137.02
116.
50
77.85
77.5
477
.23
76.9
1
76.2275.34
54.4
854
.26
45.9945.43
39.8
139
.32
33.23 32.91
26.4826.31
24.9623.17
21.50
18.8
1
18.50 16.02
-3.13-3.46 -3.75
O
TBSO
OTBS
10, (3S, 4R)10a, (3R, 4S)
**
3
S6
1H NMR of (3S,6R,7S)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanal (11)
10.0 9.5 9.0 8.5 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
14.60 12.613.412.251.25 1.221.161.00 0.95
13C NMR of (3S,6R,7S)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanal (11)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
-4.2
2-4
.00
-3.5
0-3
.23
16
.04
16
.61
18
.31
18
.76
19
.44
21
.31
22
.71
26
.13
26
.43
33
.254
5.4
4
53
.92
70
.41
76
.90
77
.23
77
.54
77
.84
20
1.5
3
21
8.1
6
O
TBSO
OTBS
H
O
11
S7
1H NMR of (3S,6S,7R)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanal (11a)
10.0 9.5 9.0 8.5 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
21.10 16.096.961.13 1.111.00 0.730.72
13C NMR of (3S,6S,7R)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanal (11a)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
-3.4
8-3
.18
15
.85
16
.04
18
.27
18
.72
18
.74
21
.48
24
.06
26
.08
26
.43
32
.854
5.9
8
53
.73
71
.18
76
.90
77
.23
77
.54
77
.80
20
1.1
6
21
8.7
4
O OTBS
H
O
11a
TBSO
S8
1H NMR of (3S,6R,7S)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanoic acid (7)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0 -0.5ppm
12.04 11.042.981.041.021.011.001.00
13C NMR of (3S,6R,7S)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanoic acid (7)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
217.
92
177.
37
78.00
77.5
4
76.9
0
72.36
54.1
2
45.49
39.8
7
33.24
26.4726.21
22.39 21.3719.27
18.8
018
.40
16.5716.09
-3.20-3.47-4.19
O
TBSO
OTBS
OH
O7
S9
1H NMR of (3S,6S,7R)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanoic acid (7a)
7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0 -0.5ppm
14.60 10.564.763.341.121.05 1.021.00 0.98
13C NMR of (3S,6S,7R)-3,7-bis(tert-butyldimethylsilyloxy)-4,4,6,8-tetramethyl-5-oxononanoic acid (7a)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
218.
56
178.
48
77.87
77.5
477
.22
76.9
1
73.37
53.8
2
46.08
40.4
2
32.92
29.9
4
26.4826.22
23.75 21.5519.00
18.8
118
.43
16.2215.88
-3.13 -3.45-4.03-4.40
O
TBSO
OTBS
OH
O7a
S10
1H NMR of 2-methyl-4-bromothiazole (13)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
3.000.94
13C NMR of 2-methyl-4-bromothiazole (13)
200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
19
.41
77
.23
77
.55
77
.87
11
6.2
9
12
3.9
3
16
7.1
9N
S CH3
Br 13
S11
1H NMR of 2-(methylthio)-4-bromothiazole (14)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
3.191.00
13C NMR of 2-(methylthio)-4-bromothiazole (14)
220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
168.
09
124.
41
115.6677
.54
77.2
376
.90
16.84N
S S
Br 14
S12
1H NMR of 2-(piperidin-1-yl)-4-bromothiazole (15)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
6.614.000.80
13C NMR of 2-(piperidin-1-yl)-4-bromothiazole (15)
200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
24
.09
25
.14
49
.26
76
.90
77
.23
77
.54
10
2.9
6
12
1.6
9
17
1.0
1
N
S N
Br 15
S13
1H NMR of 2-(phenylethynyl)-4-bromothiazole (16)
8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
3.232.19
13C NMR of 2-(phenylethynyl)-4-bromothiazole (16)
250 200 150 100 50 0ppm
76.9
177
.23
77.5
481
.58
95.6
7
118.82
121.
0412
6.06
128.75130.08132.21
149.
87
N
S
Br16
S14
1H NMR of trimethylsilyl)ethynyl)-4-bromothiazole (17)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0 -0.5ppm
9.001.11
13C NMR of trimethylsilyl)ethynyl)-4-bromothiazole (17)
180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
-0.4
0
76
.91
77
.23
77
.54
95
.52
10
3.0
2
11
8.8
4
12
5.8
6
14
9.5
2N
S
Br
TMS
17
S15
1H NMR of 2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enone (20a)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5ppm
2.83 2.752.00 1.970.91
13C NMR of 2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enone (20a)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
209.
94
165.
57 158.
45
152.
02
136.
26
120.28
77.5
477
.23
76.9
1
33.6
6
27.9
9
19.33
10.12
O
N
S
20a
S16
1H NMR of 2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enone (20b)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
2.69 2.651.911.831.00
13C NMR of 2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enone (20b)
250 240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
10
.41
16
.72
27
.92
33
.93
76
.93
77
.25
77
.57
11
9.6
3
13
7.0
2
15
2.6
3
15
7.8
1
16
6.7
1
21
0.2
5
O
N
SS
20b
S17
1H NMR of 2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enone (20c)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
6.454.00 2.842.00 2.000.91
13C NMR of 2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enone (20c)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
210.
67
170.
83 159.
10
149.
68
136.
06
109.82
77.5
577
.23
76.9
1
49.7
4
33.9
0
27.5
825
.31
24.3
5
10.36
O
N
SN
20c
S18
1H NMR of 2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enone (20d)
8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
3.07 2.942.08 2.082.03
13C NMR of 2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enone (20d)
220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
10
.45
28
.41
33
.9676
.91
77
.23
77
.54
82
.16
95
.08
12
1.2
2
12
1.8
6
12
8.7
51
30
.03
13
2.2
5
13
7.6
0
14
8.7
5
15
3.0
6
15
7.9
7
21
0.0
7
O
N
S
20d
S19
1H NMR of 2-methyl-3-(2-((trimethylsilyl)ethynyl)thiazol-4-yl)cyclopent-2-enone (20e)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0 -0.5ppm
8.292.972.042.000.95
13C NMR of 2-methyl-3-(2-((trimethylsilyl)ethynyl)thiazol-4-yl)cyclopent-2-enone (20e)
230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0 -10ppm
209.
70
157.
65
152.
63
148.
20 137.
36
121.78
102.
04
96.1
4
77.5
477
.22
76.9
1
33.7
4 28.1
8
10.22
-0.45
O
N
S
20e
TMS
S20
1H NMR of 3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enone (21)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
3.002.22 2.150.95 0.85
13C NMR of 3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enone (21)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
209.
96
157.
5415
3.06
147.
49 137.
82
121.89
83.2
477
.54
77.2
376
.91
76.3
1
33.9
2
28.3
1
10.38
O
N
S
21
S21
1H NMR of 3-(2-(1H-1,2,3-triazol-4-yl)thiazol-4-yl)-2-methylcyclopent-2-enone (22)
8.5 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
2.062.00 1.960.78 0.66
13C NMR of 3-(2-(1H-1,2,3-triazol-4-yl)thiazol-4-yl)-2-methylcyclopent-2-enone (22)
220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
208.
85
158.
4615
7.43
152.
30
141.
24
135.
46
122.24
40.1
339
.92
39.7
139
.50
39.2
939
.08
38.8
8
33.2
5
27.4
6
9.99
O
N
SN
NNH
22
S22
1H NMR of 2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enone (20f)
8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
3.28 3.142.22 2.221.091.00
13C NMR of 2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enone (20f)
230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
210.
20
158.
02
153.
39
143.
06
137.
35
132.35
120.4777
.54
77.2
376
.91
42.30
33.9
3
28.1
8
10.41
O
N
SN
NN
20f
S23
1H NMR of (S)-2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enol (6a)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
2.712.69 1.091.091.000.89
13C NMR of (S)-2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enol (6a)
200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
164.
96 153.
09
138.
66
131.
64
115.25
82.37
77.5
477
.22
76.9
1
32.9
1 32.7
2
19.55 13.37N
S
HO 6a
S24
1H NMR of (S)-2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enol (6b)
7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
2.702.63 1.48 1.421.321.00
13C NMR of (S)-2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enol (6b)
200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
165.
23 153.
34
139.
22
130.
68
114.71
82.14
77.5
477
.23
76.9
1
32.4
5
16.6813.41
N
SS
HO 6b
S25
1H NMR of 2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enol (6c)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5ppm
7.704.23 2.951.171.151.081.00
13C NMR of 2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enol (6c)
200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
170.
89 150.
07 137.
95
131.
74
104.63
82.61
77.5
477
.23
76.9
1
49.7
0
32.7
132
.19
25.3
624
.44
13.39N
SN
HO 6c
S26
1H NMR of (S)-2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enol (6d)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
2.75 2.641.81 1.021.00 1.001.000.930.90
13C NMR of (S)-2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enol (6d)
200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
154.
15
147.
77
139.
97
132.18
131.
13
129.69128.67
121.
64
117.36
93.9
5
82.7
7
82.30
77.5
477
.22
76.9
1
32.9
932
.69
13.51N
S
HO 6d
S27
1H NMR of (S)-3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enol (6e)
7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0ppm
2.60 1.231.181.101.091.071.00 1.00
N
S
OH
6e
13C NMR of (S)-3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enol (6e)
150 140 130 120 110 100 90 80 70 60 50 40 30 20 10ppm
154.
17
146.
55
140.
25
130.
85
117.49
82.30
82.1
477
.44 77
.22
77.0
176
.91
32.9
032
.66
13.47
N
S
OH6e
S28
1H NMR of (S)-2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enol (6f)
8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0ppm
2.422.34 1.16 1.121.12 1.081.000.800.74
13C NMR of (S)-2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enol (6f)
200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
157.
2515
4.26
143.
56
139.
65
132.20
131.
08
115.84
82.36
77.5
476
.91
42.20
32.7
1
13.47N
S
HO 6fN N
N
S29
1H NMR of (3S,6R,7S)-((S)-2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5a)
7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
5.734.10 3.66 3.20 3.042.92 1.211.061.01 1.011.00
13C NMR of (3S,6R,7S)-((S)-2-methyl-3-(2-methylthiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5a)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
222.
36
173.
27
165.
13
152.
46
134.
6413
4.09
116.06 85.50
77.5
477
.22
76.9
1
76.6072.74
52.3
5
40.99
37.0
533
.50
30.74
29.4
9
21.6519.7119.18
13.6510.60
O
HO
OH
O
O
N
S
5a
S30
1H NMR of (3S,6R,7S)-((S)-2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5b)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
5.524.01 3.103.05 2.89 2.881.321.00 1.000.97
13C NMR of (3S,6R,7S)-((S)-2-methyl-3-(2-(methylthio)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5b)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
222.
35 173.
23
165.
58 152.
75
134.
6613
3.88
115.65
85.46
77.5
4
76.9
1
76.6172.75
52.3
6
41.02
37.0
8 33.1
4
30.74
29.4
7
21.64 19.6919.24
16.7313.72
10.60
O
HO
OH
O
O
N
S
S
5b
S31
1H NMR of (3S,6R,7S)-((R)-2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate and (3S,6R,7S)-((S)-2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5c)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
7.58 5.894.61 3.24 3.142.971.04 1.03 1.021.000.99
13C NMR of (3S,6R,7S)-((R)-2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate and (3S,6R,7S)-((S)-2-methyl-3-(2-(piperidin-1-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5c)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
222.2
8
173.3
017
0.89 14
9.46
134.7
613
3.27
105.45
85.81
77.54
77.22 76
.91
76.5972.72
72.65
52.37
49.70
40.97
37.06
37.02
32.82
30.74
29.45
25.35
24.42
21.64 19.7319.18
13.6710.60
O
HO
OH
O
O
N
S
N
5c
S32
1H NMR of (3S,6R,7S)-((S)-2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5d)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
5.894.31 3.24 3.203.07 2.852.03 1.581.151.06 1.001.001.000.98
13C NMR of (3S,6R,7S)-((S)-2-methyl-3-(2-(phenylethynyl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5d)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
222.
34
173.
19
153.
49
147.
96 135.
4813
4.06
132.19129.75
128.69
121.
58
118.0594
.12
85.30
82.6
777
.55
77.2
376
.91
76.6272.75
52.3
7
41.03
37.0
833
.60
30.76
29.4
9
21.67 19.7119.21
13.79 10.62
O
HO
OH
O
O
N
S
5d
S33
1H NMR of (3S,6R,7S)-((S)-3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5e)
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
5.373.98 2.99 2.862.81 1.261.02 1.001.00 0.980.94 0.88
13C NMR of (3S,6R,7S)-((S)-3-(2-ethynylthiazol-4-yl)-2-methylcyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5e)
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
222.
35 173.
16
153.
47
146.
69
135.
7713
3.70
118.19
85.23
82.3
077
.54 77
.23
76.9
0
76.6172.75
52.3
6
41.02
37.0
633
.51
30.76
29.4
6
21.6719.71 19.21
13.7610.62
O
HO
OH
O
O
N
S
5e
S34
1H NMR of (3S,6R,7S)-((S)-2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5f)
13C NMR of (3S,6R,7S)-((S)-2-methyl-3-(2-(1-methyl-1H-1,2,3-triazol-4-yl)thiazol-4-yl)cyclopent-2-enyl) 3,7-dihydroxy-4,4,6,8-tetramethyl-5-oxononanoate (5f)
8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5 1.0 0.5 0.0ppm
6.384.714.21 3.63 3.38 3.281.481.211.201.181.171.141.00
240 230 220 210 200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10 0ppm
10.6213.74
19.2019.69
21.66
29.5
0
30.74
33.4
337
.08
41.0142.23
52.3
6
72.7476.60
76.9
177
.23
77.5
5
85.39
116.58
132.18
134.
0313
5.07
143.
45
153.
5815
7.39
173.
20
222.
33
O
HO
OH
O
O
N
S
5f
N NN
S35
1H NMR of (R)-3-(2-Ethynylthiazol-4-yl)-2-methylcyclopent-2-enol (23)
Neptune\data1\kso\vxrs400\KS-1-81i
7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0ppm
1.211.08 1.071.071.000.95
N
S
OH
30
13C NMR of (R)-3-(2-Ethynylthiazol-4-yl)-2-methylcyclopent-2-enol (23)
Avance600\nmrdata\tillekes\KS-1-81i_C13_APT\KS-1-81i_C13_APT_001000fid
150 140 130 120 110 100 90 80 70 60 50 40 30 20 10ppm
154.
23
146.
57
140.
31
130.
86
117.46
82.31
82.1
2
77.4
677
.25
77.0
476
.96
32.9
432
.69
13.48
N
S
OH
30
23
23
23
S36
1H NMR of 2-Methyl-3-(2-((trimethylsilyl)ethynyl)thiazole-4-yl)cyclopent-2-enol (24)
Neptune\data1\kso\inova600\KS-1-95d
7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0ppm
3.02 2.261.05 1.051.051.000.95 0.90
N
S
OH31
13C NMR of 2-Methyl-3-(2-((trimethylsilyl)ethynyl)thiazole-4-yl)cyclopent-2-enol (24)
Avance600\nmrdata\tillekes\KS-1-95d_C13_APT\KS-1-95d_C13_APT_001000fid
150 140 130 120 110 100 90 80 70 60 50 40 30 20ppm
154.
23
146.
57
140.
31 130.
85
117.
46
82.1
3
77.4
777
.26
77.0
476
.96
32.9
432
.69
N
S
OH 3124
23
23
24
23
S37
1H NMR of 3-(2-Ethynylthiazol-4-yl)-2-methylcyclopent-2-enone oxime (25)
Neptune\data1\kso\inova600\KS-1-85h
10.0 9.5 9.0 8.5 8.0 7.5 7.0 6.5 6.0 5.5 5.0 4.5 4.0 3.5 3.0 2.5 2.0 1.5ppm
2.76 2.171.500.72 0.590.38
N
S
NOH 32
13C NMR of 3-(2-Ethynylthiazol-4-yl)-2-methylcyclopent-2-enone oxime (25)
Avance600\nmrdata\tillekes\KS-1-85h_C13_APT\KS-1-85h_C13_APT_001000fid
200 190 180 170 160 150 140 130 120 110 100 90 80 70 60 50 40 30 20 10ppm
206.
25
168.
12
154.
67
147.
50
141.
45
135.
52
120.2484
.41
77.4
0
31.7
730
.07
29.8
229
.69
24.4
9
11.63
N
S
NOH
32
25
23
25
23
S38
5e (M)
0
20
40
60
80
100
120
0 5 10 15 20 25
HOP62
NCI-H522
* p<0.05
* * *
Norm
aliz
ed ce
ll vi
abili
ty
0
20
40
60
80
100
120
140
Norm
aliz
ed ce
ll vi
abili
ty HOP62NCI-H522
5e (All at 20 M)5d 5a
-0.10
0.10.20.30.40.50.60.7
DMSO 5e 6e 23 24 25
21
6e
0
0.2
0.4
0.6
0.8
1
1.2
0 2 4 6 8 10Concentration (M)
Abso
rban
ceAb
sorb
ance
A
B
C
D
Supplemental Figure S1. Initial assessment toxicity induced by compound 5e and analogues. (A and B) NCI-H522 or HOP-62 cells were plated and exposed to the indicated compounds at the doses specified. Cells treated for 5 days were analyzed by methylene blue staining to determine viable cells. Average values are shown with bars to represent standard deviation. *p<0.05. (C and D) NCI-H522 were exposed to the compounds indicated. Three days later, viability was determined either by measuring absorbance after methylene blue staining (in C) or using the MTS assay (in D) as described in materials and methods. In “C”, significantly lower absorbance was observed after either 2.5M or 5M of 6e compared to compound 21 (p<0.02). In “D” all compounds resulted in significantly lower absorbance compared to DMSO (p<0.005, students t-test).
S39
H:MIN
0:24
2:12
0:36 0:48 1:00 1:12
1:24 1:36 1:48 2:00
Supplemental Figure S2. Time lapse microscopy of NCI-H522 cells exposed to 6e. Images were captured every 12 min. In the example shown, mitosis begins 48 min after drug addition. Two other cells in the same field completed mitosis, and by the end of the movie (19 h post drug addition) all cells were dead.
TMRE Phase Contrast
0h
2h
4h
8h
0
1
2
3
4
0
5
10
15
20
25
30
0
5
10
15
20
25
0 2 4 8 0 2
TMR
E in
tens
ity
TMR
E in
tens
ity
hr post treatment
Average whole cellIndividual mitochondria
hr post treatment
num
ber o
f cel
ls
increasing TMRE
8hDMSO
A B
Supplemental Figure S3. Effect of compound 6e (10M) on mitochondrial function. NCI H522 cells treated for times indicated with compound 6e and stained with TMRE to indicate mitochondrial potential. (A) Representative microscopic fields of stained cells. Arrowheads: two cells that have lost mitochondrial membrane potential; phase contrast indicates that these are dead cells. (B) Quantitation of TMRE staining from microscopic images in whole cells or individual mitochondria.