Identification of NeSL-1 in Caenorhabitis

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N M-Coffee: combining multiple sequence alignment methods with T-Coffee. Wallace IM, O'Sullivan O, Higgins DG, Notredame C. Nucleic Acids Res. 2006 Mar 23;34(6):1692-9. Print 2006. The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods. Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W645-8. Epub 2007 May 25

Transcript of Identification of NeSL-1 in Caenorhabitis

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N M-Coffee: combining multiple sequence alignment methods with T-Coffee.

Wallace IM, O'Sullivan O, Higgins DG, Notredame C.

Nucleic Acids Res. 2006 Mar 23;34(6):1692-9. Print 2006.

The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods.

Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W645-8. Epub 2007 May 25

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Tcoffee@igs: A web server for computing, evaluating and combining multiple sequence alignments.Poirot O, O'Toole E, Notredame C.Nucleic Acids Res. 2003 Jul 1;31(13):3503-6.T-Coffee: A novel method for fast and accurate multiple sequence alignment.Notredame C, Higgins DG, Heringa J.J Mol Biol. 2000 Sep 8;302(1):205-17.

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R-Coffee: a web server for accurately aligning noncoding RNA sequences.Moretti S, Wilm A, Higgins DG, Xenarios I, Notredame C.Nucleic Acids Res. 2008 Jul 1;36(Web Server issue):W10-3. Epub2008 May 15.

R-Coffee: a method for multiple alignment of non-coding RNA.Wilm A, Higgins DG, Notredame C.Nucleic Acids Res. 2008 May;36(9):e52. Epub 2008 Apr 17.

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C elegans/C remanei

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C japonica/C brenneri

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C elegans

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C brenneri

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C remanei

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C japonica

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C elegans;1-115 | C brenneri 1-115C remanei; 1-115 | C japonica 1-115

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C elegans;1-115 | C brenneri 1-115C remanei; 1-115 | C japonica 1-115

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C elegans;1-115 | C brenneri 1-115C remanei; 1-115 | C japonica 1-115

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C elegans;1-115 | C brenneri 1-115C remanei; 1-115 | C japonica 1-115

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C elegans;1-115 | C brenneri 1-115C remanei; 1-115 | C japonica 1-115

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1. Cross-Genome Screening of Novel Sequence-Specific Non-LTR Retrotransposons: Various Multicopy RNA Genes and Microsatellites Are Selected as Targets; Kenji K. Kojima and Haruhiko Fujiwara; Department of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo1

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