Human TAFII135 transcriptional activation by the AF-2s of...

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Human TAFII135 potentiates transcriptional activation by the AF-2s of the retinoic acid, vitamin D3, and thyroid hormone receptors in mammalian cells Gabrielle Mengus, Michael May, 1 Lucie Carr6, Pierre Chambon, and Irwin Davidson 2 Institut de G6n6tique et de Biologie Moleculaire et Cellulaire; Centre National de la Recherche Scientifique/Institut National de la Sant4 et de la Recherche M6dicale/Universite Louis Pasteur ICNRS/INSERM/ULP}, Collhge de France, Illkirch C4dex France. We report for the first time the cloning of a complete cDNA encoding the human TFIID subunit hTAFn135 (hTAFnl30). Full-length hTAFII135 comprises 1083 amino acids and contains two conserved domains present also in dTAFnll0 and hTAFII105. We show that expression of hTAFn135 in mammalian cells strongly and selectively potentiates transcriptional stimulation by the activation function-2 (AF-2) of the retinoic acid, thyroid hormone, and vitamin D3 receptors (RAR, TR, and VDR), but does not affect the AF-2s of the estrogen (ER) or retinoid X (RXR) receptors. The coactivator activity requires an hTAFn135 region that is located between the conserved domains but is itself not conserved in dTAFnll0 and hTAFnl05. Expression of hTAFII135 also stimulates RAR AF-2 activity when a promoter with a low-affinity TATA element (TGTA) is used, indicating that hTAFH135 overexpression compensates for the low-affinity of TBP for this promoter and may facilitate the recruitment of TFIID by the RAR AF-2. [Key Words: TFIID; coactivators; TATA-binding protein; nuclear receptors; recruitment] Received February 18, 1997; revised version accepted April 14, 1997. The RNA polymerase II (Pol II} transcription factor TFIID comprises the TATA-binding protein (TBP) and TBP-associated factors (TAFHs) (Dynlacht et al. 1991; Pugh and Tjian 1991; Tanese et al. 1991; Timmers et al. 1992; Zhou et al. 1992; Brou et al. 1993; Chiang et al. 1993; for reviews, see Hernandez 1993; Goodrich and Tjian 1994; Burley and Roeder 1996). The cDNAs encod- ing many TAFHs have been isolated revealing a striking sequence conservation from yeast to human (Jacq et al. 1994; Mengus et al. 1995; Bertolotti et al. 1996; Du- brovskaya et al. 1996; Hoffmann and Roeder 1996; Kle- banow et al. 1996; Lavigne et al. 1996; Moqtaderi et al. 1996a; for additional references, see reviews by Struhl 1995; Burley and Roeder 1996). TFIID plays a key role in regulated Pol II transcription in vitro, as TFIID, but not TBP, can support activator-dependent transcription (Hoey et al. 1990; Pugh and Tjian 1990; Zhou et al. 1992; Brou et al. 1993; for reviews, see Goodrich and Tjian 1994; Tjian and Maniatis 1994; Stargell and Struhl 1996a). Thus, in animal systems, TAF.s appear to be 1Present address:Institut fiir Virologie, Cologne, Germany. 2Correspondingauthor. E-mail [email protected]; FAX 33 3 88 65 32 01. essential for the response to transcriptional activators in vitro. Additional support for this TAF H function has come from studies showing direct and selective interactions between TAFIIS and transcriptional activator proteins IGoodrich et al. 1993; Hoey et al. 1993; Chen et al. 1994; Gill et al. 1994; and references therein). For example, the estrogen receptor (ER) interacts directly with hTAFH30 and ligand-independent activation in vitro by the ER re- quires TFIID complexes containing hTAFH30 (Jacq et al. 1994}. Interactions between multiple activators and TAFHs have been reported to result in transcriptional synergy in vitro (Sauer et al. 1995). Together, these stud- ies show that TAF.s act as specific coactivators in vitro by engaging in direct and selective interactions with transactivators. This model of TAF n function has been challenged by genetic studies in yeast where it has been shown that the presence of several yeast TAF.s is not required for acti- vated transcription (Apone et al. 1996; Moqtaderi et al. 1996a; Walker et al. 1996). Nevertheless, TAFHs do play an essential role in yeast because mutant strains are not viable, being blocked in the cell cycle, reminiscent of what is observed in mammalian cells where TAFII250 GENES & DEVELOPMENT 11:1381-1395 © 1997 by Cold SpringHarborLaboratoryPress ISSN 0890-9369/97 $5.00 1381 Cold Spring Harbor Laboratory Press on February 27, 2021 - Published by genesdev.cshlp.org Downloaded from

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Human TAFII135 potentiates transcriptional activation by the AF-2s of the retinoic acid, vitamin D3, and thyroid hormone receptors in mammalian cells Gabriel le Mengus , Michae l May, 1 Lucie Carr6, Pierre C h a m b o n , and Irwin Dav idson 2

Institut de G6n6tique et de Biologie Moleculaire et Cellulaire; Centre National de la Recherche Scientifique/Institut National de la Sant4 et de la Recherche M6dicale/Universite Louis Pasteur ICNRS/INSERM/ULP}, Collhge de France, Illkirch C4dex France.

We report for the first time the cloning of a complete cDNA encoding the human TFIID subunit hTAFn135 (hTAFnl30). Full-length hTAFII135 comprises 1083 amino acids and contains two conserved domains present also in dTAFnl l0 and hTAFII105. We show that expression of hTAFn135 in mammalian cells strongly and selectively potentiates transcriptional stimulation by the activation function-2 (AF-2) of the retinoic acid, thyroid hormone, and vitamin D3 receptors (RAR, TR, and VDR), but does not affect the AF-2s of the estrogen (ER) or retinoid X (RXR) receptors. The coactivator activity requires an hTAFn135 region that is located between the conserved domains but is itself not conserved in dTAFnll0 and hTAFnl05. Expression of hTAFII135 also stimulates RAR AF-2 activity when a promoter with a low-affinity TATA element (TGTA) is used, indicating that hTAFH135 overexpression compensates for the low-affinity of TBP for this promoter and may facilitate the recruitment of TFIID by the RAR AF-2.

[Key Words: TFIID; coactivators; TATA-binding protein; nuclear receptors; recruitment]

Received February 18, 1997; revised version accepted April 14, 1997.

The RNA polymerase II (Pol II} transcription factor TFIID comprises the TATA-binding protein (TBP) and TBP-associated factors (TAFHs) (Dynlacht et al. 1991; Pugh and Tjian 1991; Tanese et al. 1991; Timmers et al. 1992; Zhou et al. 1992; Brou et al. 1993; Chiang et al. 1993; for reviews, see Hernandez 1993; Goodrich and Tjian 1994; Burley and Roeder 1996). The cDNAs encod- ing many TAFHs have been isolated revealing a striking sequence conservation from yeast to human (Jacq et al. 1994; Mengus et al. 1995; Bertolotti et al. 1996; Du- brovskaya et al. 1996; Hoffmann and Roeder 1996; Kle- banow et al. 1996; Lavigne et al. 1996; Moqtaderi et al. 1996a; for additional references, see reviews by Struhl 1995; Burley and Roeder 1996). TFIID plays a key role in regulated Pol II transcription in vitro, as TFIID, but not TBP, can support activator-dependent transcription (Hoey et al. 1990; Pugh and Tjian 1990; Zhou et al. 1992; Brou et al. 1993; for reviews, see Goodrich and Tjian 1994; Tjian and Maniatis 1994; Stargell and Struhl 1996a). Thus, in animal systems, TAF.s appear to be

1Present address: Institut fiir Virologie, Cologne, Germany. 2Corresponding author. E-mail [email protected]; FAX 33 3 88 65 32 01.

essential for the response to transcriptional activators in vitro.

Additional support for this TAF H function has come from studies showing direct and selective interactions between TAFIIS and transcriptional activator proteins IGoodrich et al. 1993; Hoey et al. 1993; Chen et al. 1994; Gill et al. 1994; and references therein). For example, the estrogen receptor (ER) interacts directly with hTAFH30 and ligand-independent activation in vitro by the ER re- quires TFIID complexes containing hTAFH30 (Jacq et al. 1994}. Interactions between multiple activators and TAFHs have been reported to result in transcriptional synergy in vitro (Sauer et al. 1995). Together, these stud- ies show that TAF.s act as specific coactivators in vitro by engaging in direct and selective interactions with transactivators.

This model of TAF n function has been challenged by genetic studies in yeast where it has been shown that the presence of several yeast TAF.s is not required for acti- vated transcription (Apone et al. 1996; Moqtaderi et al. 1996a; Walker et al. 1996). Nevertheless, TAFHs do play an essential role in yeast because mutant strains are not viable, being blocked in the cell cycle, reminiscent of what is observed in mammalian cells where TAFII250

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Mengus et al.

has been mutated (Sekiguchi et al. 1991; Reese et al. 1994; Poon et al. 1995; Apone et al. 1996; Klebanow et al. 1996). Therefore, there is a discrepancy between the fact that TAFt, s are dispensible for activator function in yeast, but are absolutely required for this function in animal cell extracts in vitro.

Evidence that hTAFIIS may function as coactivators in mammalian cells has come from the investigation of the role of hTAFII28 in transcriptional activation by nuclear receptors (NRs). NRs generally comprise two activation functions (AFs), AF-1 located in the amino-terminal A/B region and AF-2 located in the ligand-binding domain (LBD) in the carboxy-terminal E region (for review, see Parker 1993, Chambon 1994, 1996; Tsai and O'Malley 1994; Beato et al. 1995; Kastner et al. 1995; Laudet and Gronemeyer 1995; Mangelsdorf et al. 1995; Mangelsdorf and Evans 1995). The AF-2 is ligand inducible and re- quires the AF-2 activating domain core (AF-2 AD core), a conserved amphipathic s-helix at the carboxyl end of the LBD (Danielan et al. 1992; Barettino et al. 1994; Durand et al. 1994; for review, see Chambon 1996). Ligand bind- ing induces a conformational change bringing the AF-2 AD core (s-helix H12) into contact with s-helix H4 of the LBD (Bourguet et al. 1995; Renaud et al. I995; Wag- ner et al. 1995; Wurtz et al. 1996) allowing the NRs to interact with putative transcriptional intermediary fac- tors (TIFs) required for AF-2 activity (Cavaillhs et al. 1995; Le Douarin et al. 1995, 1996; Lee et al. 1995; Onate et al. 1995; Swaffield et al. 1995; Vom Baur et al 1995; Chakravati et al. 1996; Fondell et al. 1996; Hanstein et al. 1996; Hong et al. 1996; Kamei et al. 1996; Smith et al. 1996; Voegel et al. 1996; Yao et al. 1996; and references therein).

We have shown that TAFn28 is depleted in Cos cell TFIID. Ectopic expression of recombinant hTAFrI28 , a fraction of which associates stably with Cos cell TFIID, strongly enhances activation by the retinoid X receptor (RXR), the vitamin D receptor (VDR), and ER AF-2s (May et al. 1996). This activity did not involve direct hTAF,28-NR interactions, but was abrogated by muta- tions impairing hTAFn28-TBP interactions, suggesting that hTAFn28 acts as a bridging factor between the NR AF-2-associated TIFs and the basal transcription machin- ery through TBP (May et al. 1996). Expression of hTAFn28 also enhances activation by the viral Tax trans- activator, which interacts directly with hTAFn28 and TBP to form a ternary complex. Expression of TBP and TAFn28 increases activation by Tax in HeLa cells by up to 40-fold (Caron et al. 1997). Thus, although TAFns may not be required for activation in yeast, the above results provide strong evidence that hTAFn28 can act as a spe- cific coactivator in mammalian cells.

Previously, we have reported the cloning of the car- boxy-terminal region of hTAFII135 (Mengus et al. 1995). We now report the cloning of full-length hTAFn135 (hTAFnl30 in Dikstein et al. 1996; Tanese et al. 1996). hTAFn135 is homologous to hTAFnl05 and dTAFII110 in the carboxy-terminal and central regions, but has no yeast homolog. Expression of hTAFn135 in several mam- malian cell lines strongly potentiates transactivation by

the retinoic acid receptor (RAR), the thyroid homone re- ceptor (TR), and VDR AF-2s, whereas no effect was seen on activation by the ER, the RXR, or with unrelated ac- tivators. Using a promoter with a TGTA element instead of a TATA element, we show that coexpression of hTAF.135 and the cognate TBP spm3 mutant results in activation by the RAR AF-2. However, expression of hTAF H 135, in the absence of coexpressed TBP spm3, also allowed activation by the RAR, TR, and VDR AF-2s, but did not affect the activity of the VP 16 or TEF-1 AFs. This observation indicates that hTAFH135 most probably acts to facilitate the recruitment of the endogenous TFIID by the RAR, TR, and VDR AF-2s.

R e s u l t s

Molecular cloning of hTAFnI35

HeLa cell TFIID was isolated by chromatography, im- munopurified with anti-TBP monoclonal antibodies (Mengus et al. 1995, Lavigne et al. 1996), and the 135-kD subunit was excised and the sequences of four tryptic peptides (underlined in Fig. 1A) were obtained (see Materials and Methods). Degenerate oligonucleotides derived from two of the peptide sequences (see Mater- ials and Methods) were used to screen a HeLa cell cDNA library. Alignment of the sequences of four iso- lated cDNAs indicated the existence of a 732-amino- acid open reading frame (ORFI corresponding to the central and carboxy-terminal regions of hTAFn135 (see Fig. 1A). Screening of several cDNA libraries failed to yield cDNAs extending further upstream, because of the high GC content of this region blocking reverse tran- scription.

To isolate a full-length hTAFn135 ORF, the first 400 nucleotides of the partial cDNA were used to screen a human genomic DNA library. A 4.7-kb genomic fragment was subcloned and sequenced (see Materials and Methods). This fragment contained the first 101 amino acids of the cDNA followed by an intron begin- ning at nucleotide 1356 (see Fig. 1A). Analysis of the genomic sequence upstream of the cDNA revealed a highly GC rich region, potentially encoding a further 351 amino acids initiated by an ATG codon. An in-frame stop codon was found upstream of this ATG (data not shown).

To determine whether the predicted sequence encodes hTAFH135 , the total ORF of 1083 amino acids was expressed in transfected Cos cells (see Materials and Methods). The recombinant protein was detected using a monoclonal antibody (mAb 20TA), raised against bacterially produced histidine-tagged hTAFn135(815- 1083) (see Fig. 2; Materials and Methods). mAb 20TA recognizes endogenous hTAFn135 in HeLa cell nu- clear extracts (NE) and in the HeLa TFIID immunopuri- fied (IP) using the anti-TBP mAb 3G3 (Fig. 1C, lanes 1,4,7,8). Recombinant hTAFn135 had an electrophoretic mobility identical to that of the endogenous HeLa cell TAFn135 (Fig. 1C, lanes 7-10), and could be precipitated from the transfected cell extracts by mAb 20TA (Fig. 1C, lane 10).

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TAF.135 enhances RAR AF-2 activity

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, +~" ~o ÷~" ~,o sequence of hTAF.135. The numbers indi- ' , ~ . ~ ~o'".,~,~ o~.~-" ~llp d- aG3~vA' _ + ' + "~'~ ~÷- "~'< ~"~ ~÷ "~ cate the nucleotides and the numbers in pa-

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, ~ a ~a of the amino termini of the deletion mu- tants are indicated by the arrows. Peptides

derived from endogenous HeLa cell hTAFn135 are underlined. The open boxes show the peptides P1 and P2 used to generate antibodies and the filled box indicates the region required for coactivator activity. (BJ Alignment of the amino acid sequences of hTAF a t35, hTAFal05, and dTAFn110. For clarity only the carboxy-terminal region where there are significant homologies is shown. The numbers indicate the amino acid coordinates in each protein. Amino acids conserved in at least two of the three proteins are shaded. (C) Quantitative comparison of TAFu135 levels in different cell types and comparison of the electrophoretic and antigenic properties of endogenous and recombinant hTAFu135. (Left) Lanes 1-3 contain the cell extracts shown above each lane and in lanes 4-6 the TFIIDs immunopurified from these extracts with the anti-TPB mAb3G3. The blot was first revealed with mAb 20TA (top) to reveal TAFn135 and then reincubated with mAbs 3G3 and 19TA (bottom) to reveal TBP and TAFu55, respectively. The positions of TAFII135, TAFn55, the TBPs from human (HeLa), monkey (Cos), and mouse (MPC11 ), and the heavy chain of the antibody [IgG(H)] used in the immunopurif icat ions are indicated. (Middle)The extracts shown above each lane were immunoprecipi ta ted with the mAbs shown above the panel and the blot was revealed with the anti- hTAFII135 mAb 20TA shown below the panel. (Right) Lanes 11-13 and I4-16 contain aliquots of the same material. (N.E.) nuclear extract; (IP TFIID) TFIID immunopuri f ied with the anti-TBP mAb 3G3; (S.N.) immunoprecipi ta t ion supernatant.

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Mengus et al.

REPORTERS

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l 17m5 ITGTA . . . . . . . . . . . . . . . . . . . . . .

hTAFII135 EXPRESSION VECTORS

p X J 4 0 - h T A F I I 1 3 5 ( 1 - 1 0 8 3 )

p A T 6 - h T A F I I 1 3 5 ( 3 7 2 - 1 0 8 3 )

p A T 6 - h T A F I I 1 3 5 ( 3 7 2 - 7 1 8 )

p A T 6 - h T A F I I 1 3 5 ( 7 1 3 - 1 0 8 3 )

p X J 4 2 - h T A F I I 1 3 5 ( 6 3 0 - 1 0 8 3 )

p X J 4 2 - h T A F I I 1 3 5 ( 8 0 5 - 1 0 8 3 )

p E T 1 5 B - h T A F I I 1 3 5 ( 8 1 5 - 1 0 8 3 )

~r ~1~: " ---- --.2".i . . . . . . . . lo8a

~ ~ 1 0 8 3

~ 718

~ 1083

~ 1083

~ 1083

ACTIVATORS 206 (467

G4-RXRo~(DE) ~ ' 1 4 7 ~ / D/E 154 462 ~ut 553 595

G4-RAR(x(DEF) |edu~1-!~ Dm_m laR~ 147 462 ~j5531595

G4-RAR~DEF) | ~ ~ ' D/E/F ]ER-I~ ~156 462 ~t./553/595

G4-RAR~DEF) |(~L4(t~!~ DF~F IER-~ 154 396

G4-dnRAR~(DE) ~ 1 ~ ( D/E G4-ER(EF) ~ ] ~ 282 E/F {595

G4-VDR(DE) [ ~ i ~ 9° O/E (427 .119 (408

G4-TR(DE) [~e~U,~l,1~ DIE

G4-TE F-1 ,e~I(1-14~( 2 54V';:F-, ~26 G4-VP16 [(~M'~!4~ 411 VP16 ~f490

G4-AP-2 I GAL4(1"93) (31 AP-2 (76 50 (161

G4-Spl I GAL40-93) ( Spl fl (.,

mRAR~ AtB J C I D~

Figure 2. Schematic representation of the reporter gene and expression vectors. (Reporters) 17m5-TATA-CAT contains five Gal4- binding sites inserted 38 nucleotides upstream of the adenovirus major late promoter and the chloramphenicol-acetyltransferase (CAT) gene. RARI32-CAT contains the RAR[32 promoter fused to the CAT gene as described previously INagpal et al. 1992). 17m5-TGTA- Luc contains five Gal4-binding sites upstream of the mutated RAR[~2 TATA element and the luciferase gene as previously described (Keaveney et al. 1993). (hTAFII135 expression vectors) The vectors expressing wild-type, B10-tagged (pAT6), and mutant derivatives of hTAFII135 are schematized. The numbers are the amino acid coordinates in each case. {Activators) The vectors expressing all RAR, RXR, VDR, TR derivatives, G4-TEF-l{2-426)A55-121, G4-VP16, G4-AP-2, and G4-Spl are schematized. Gal4 is abbreviated to G4. In all cases the numbers indicate the amino acid coordinates in the native proteins.

To confirm that the region deduced from the genomic sequence was present in hTAF.135, we generated anti- bodies against two peptides in this region (P1 and P2, open boxes in Fig. 1A). These antibodies recognized en- dogenous HeLa cell TAFn135 in nuclear extracts and in immunopurified TFIID (Fig. 1C, cf. lanes 11-13 revealed with anti-P1 antibody with lanes 14-16 revealed with mAb20TA; data not shown for anti-P2 antibody). To- gether these results show that the deduced ORF shown in Figure 1A is in the correct reading frame to encode recombinant hTAFH135 with an electrophoretic mobil- ity and antigenicity identical to that of the endogenous HeLa cell protein.

Comparison of the amino acid sequence of hTAF,r135 with that of other TAFHs clearly indicated that the car- boxy-terminal domain of hTAFn135 is highly homolo- gous to that of dTAFII 110 and hTAFII105 (Fig. 1B; Dik- stein et al. 1996; Tanese et al. 1996). A second region in the central portion of these proteins is also conserved, particularly between hTAF. 135 and hTAF. 105, (amino acids 589-680 in Fig. 1B; see Tanese et al. 1996). Our amino-terminal amino acid sequence extends the partial sequence reported by Tanese et al. (1996), which begins at Gl18. Unexpectedly, however, the amino acids amino-terminal to L398 differ from those reported by Dikstein et al. (1996).

hTAF,135 potentiates transcriptional activation by the AF-2 of RARs in several ceil lines

Expression of hTAFH28 in Cos cells potentiated selec- tively and strongly transcriptional activation by the AF-2s located in the LBD (region E) of the RXR, ER, and VDR (May et al. 1996). Similarly we tested the ability of the newly cloned hTAFH135 to modulate transcrip- tional activation by NRs and other activators. Full- length hTAF.135 was coexpressed along with chimeras containing the AF-2s of different activators fused to the DNA-binding domain of the yeast activator Gal4 (G4), and the G4-responsive reporter gene 17m5-TATA-CAT (the reporters and activators are schematized in Fig. 2; see May et al. 1996).

The AF-2 in G4-RARc~IDEF) activates transcription in transfected Cos cells in a ligand-dependent manner (Fig. 3, A, lane 3, and B, lanes 2 and 3). Strikingly, coexpres- sion of full-length hTAF.135(1-1083) led to a greater than 20-fold increase in transactivation by the RAR AF-2 (Fig. 3A, lanes 4,5), whereas expression of hTAFII135 alone had no effect (Fig. 3A, lane 2). A similar strong increase in RARa AF-2 activity was seen with the hTAFH135(372-1083 ) deletion mutant (Figs. 3B, lanes 5 and 6, and 4A, lanes 3 and 4). Analogous effects were also observed with the RAR6 and RARy AF-2s (Fig. 3B, lanes

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TAF.135 enhances RAR AF-2 activity

17m5-TATA-CAT 17mS-TATA-CAT

° jl :j_.,L 20

30 g

o o = 20 ~:~ (D O~ I

0 10

0 G4-RARe(DEF) + + + G4-TR(.((DE) - + + + - - - G4-VDR(DE) + + + G4-ER(EF) + + + G4-RXRu(DEF) - - + + +

hTAFII135(1-1083)- + - ~ , , d ~ - ~ - ~ .TAF I I135 (1 -1083 ) - - ~ -

tq NlPttOttt t t t t t t t 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18

60 17m5-TATA-CAT

50

~ ~o ~- 16

G4-RAR~(DEF) - + + - + + +

G4-RAR~(OEF) + + + +

G4-RART~DEF) + ~ hTAFII135(372-1083) + ~ _ ~ _

T-RA + + + + _ + + + _ + + +

" m e e 0 0 o Q

tttt,l, tttttttt 1 2 3 4 5 6 7 8 9 10 11 12 13 14

Figure 3. IA) Expression of hTAF~I135 potentiates transactivation by the RARe, VDR, and TR AF-2s in Cos cells. (Bottom) The autoradiography of CAT assays per- formed with extracts from cells transfect- ed with the expression vectors shown above each lane. Transfections contained 1 pg of the 17mS-TATA-CAT report- er, 250 ng of the G4-RAR, ER, or VDR ex- pression vectors, and 1 pg of the G4-RXR expression vector with 0, 3, or 7 pg of the hTAF.135(1-1083) expression vector. All transfections contained the appropriate li- gands. ITop)The quantitative phosphorIm- ager analysis of the CAT assays repre- sented in bottom. Values are expressed as percentage of the total chloramphenicol that was acetylated. In all figures similar results (_+ 20%) were obtained in at least three independent transfections and the re- sults of a typical experiment are shown. (B1 The layout is as in A. Transfections con- tained 0, 2, or 5 pg of the hTAF.135(372- 1083) deletion mutant expression vector and 250 ng of the G4-RAR expression vec- tors. The transfections in control lanes (i.e., lane 4) contain always the highest concentration of the hTAFH135 expression vector. The presence or absence of all- trans-retinoic acid (T-RA) in the transfec- tions is indicated.

8-14). With both full-length TAFn135 and TAFn135(372- 1083) activation was strictly ligand dependent (Fig. 3B, lanes 7,11; data not shown). In contrast, no activation was seen either in the presence or absence of hTAF]~135 using the dominant-negative mutan t G4-dnRAR~(DE) in which the AF-2 AD core has been deleted (Fig. 4C). Thus, hTAFII135 expression strongly potentiates the ac- t ivity of the RAR AF-2.

The region of hTAFn135 required for this enhance- ment was localized using a series of deletion mutants. Coexpression of hTAFII135(372-1083 ) and (713-1083} re- sulted in a strong increase in RAR AF-2 activity, whereas hTAF[I135(372-718 ) had no significant effect (Fig. 4A, lanes 3-8). Similarly, expression of hTAFII135(630-1083 ) strongly potentiated RAR AF-2 activity, whereas no sig- nificant effect was seen with hTAFII135(805-1083 ) (Fig. 4B, lanes 3-6). All deletion mutants were expressed at comparable levels, higher than that of full-length hTAFn135 (Fig. 4D). Thus, a domain residing within, or overlapping with, amino acids 713-805 of hTAFH135 (boxed in Fig. 1A) is required to potentiate the activity of the RAR AF-2.

We evaluated the possible cell specificity of the hTAF~I135 enhancement effect. As in Cos cells, RAR~ AF-2-activated transcription in CV1 cells was s t imulated more than 20-fold by coexpression of hTAFH135(630-

1083) (Fig. 5A), whereas it was enhanced only sixfold in HeLa cells where the op t imum concentration of hTAFH135 expression vector was lower than in Cos and CV1 cells (Fig. 5B). In MPC11 lymphoid cells the RARo~ AF-2 strongly activated transcription and coexpression of hTAFH135(630-1083) led to only a fourfold increase in its activity (Fig. 5C). These results show that hTAFHI35 can potentiate activation by the RARo~ AF-2 in several cell lines, albeit to different degrees.

The observation that ectopically expressed hTAF~135 enhances activation by the RAR AF-2 indicates that it is functionally l imit ing in the different cell types. The dif- ferential enhancement seen in these cell lines may re- flect differences in the relative abundance of TAFI~135. To test this possibility, the amount of TAFII135 present in HeLa, Cos, and MPC11 cell extracts was determined by immunoblot t ing. Each extract contained s imilar amounts of TBP and TAFII55 (Fig. 1C, lanes 1-3, bottom) as well as TAF~20 and TAFH18 (see May et al. 1996; data not shown). However, relative to both TBP and TAFH55 , significantly less TAFH135 was seen in Cos and CV1 cell extracts, compared to HeLa and M P C l l cell extracts (Fig. 1C, lanes 1-3; data not shown). Confirming this result, TAFH135 was present, but less abundant in im- munopurif ied Cos cell TFIID than in HeLa and MPC11 cell TFIIDs (Fig. 1C, lanes 4-6). Thus, the degree to

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Mengus et al.

Figure 4. (A-B) Deletion mutants in hTAFii135 define a region important for its coactivator activity. The layout is as de- scribed in Fig. 3A. Cos cell transfections contained 0, 2, or 5 pg of the indicated hTAFII135 mutant expression vectors. (C) The coactivator effect of TAFI[135 requires the AF-2 AD core. The layout is as in A-B. (D) Expression of hTAFn135 deletion mu- tants. Transfections were performed with 5 pg of the expression vectors shown above each lane and the Western blot was re- vealed with the mAbs 20TA directed against hTAFII 135 and B 10 directed against B10-tagged hTAFH135 constructs. The wild-type and mutant proteins are indi- cated by the arrows. Lane 7 shows a longer exposure of lane 3.

17m5-TATA-CAT

A4° t g 30

~g 20 O

lO

o ~'~ G4-RARR(DEF) +

7 1 3 - 1 0 8 3 )

hTAFII 1351(372-718) ~372-1083) -

- - + + 4- + -F +

+ ~ . , d ~

o 0 0 o o O o 0 0 ~ o Q

9 t t t t t t t 1 2 3 4 5 6 7 8

17m5-TATA-CAT

c- o

0

o G4-dnRARrs(DEF) +

hTAFII135[ ~3721083) 630-1083) -

r-:-3 - + + + +

_ _ ~ + ~ - _

t t t t t t 7 8 9 10 11 12

17m5-TATA-CAT 80-

0

0 G4-RARo~(DEF) - + + + + +

,1~63°-1°83/- - ~ - -

tt tt 1 2 3 4 5 6

hTAFII135 I

/ ' G " "

r-

L 1 2 3 4 5 6 7 j

mAb anti-hTAFii 135

which ectopic expression of TAFII135 st imulates RAR AF-2 activity correlates inversely wi th the relative abun- dance of this protein in each cell type.

The experiments described so far were all performed using G4-AF-2 chimeras on a m i n i m a l promoter. To test whether hTAFH135 could also affect activation by wild- type NRs, the natural RARI32 promoter was used. This promoter contains a RA response element (RARE) and is s t imulated in the presence of RA. Transcription of a CAT reporter under the control of the RARe32 promoter is s t imulated by the endogenous RAR-RXR het- erodimers upon addition of all-trans (T-)RA in trans- fected Cos cells (Nagpal et al. 1992, Fig. 5D, lanes 1,2}. The coexpression of hTAFH135(630-1083 ) resulted in a fivefold increase in the ligand-dependent activity of this reporter (Fig. 5D, lanes 2-5). Expression of TAF.135 also enhanced ligand-dependent activation from the RARe2 promoter in the presence of cotransfected wild-type RARcx (Fig. 5E, lanes 3-6). Thus, coexpression of hTAF.135 enhances activation by endogenous and ecto- pically expressed wild-type RAR.

The coactivator activity of hTAF,135 is restricted to a subset of NR AF-2s

We then investigated whether hTAFH135 could potenti-

ate activation by the AF-2s of other NRs. Expression of hTAF. 135(1-1083) or (630-1083) resulted in >10-fold in- crease in the activity of the VDR and TR AF-2s (Figs. 3A, lanes 6-8, 13-15, 6A, lanes 7-10, and 6B, lanes 3-6). No significant increase in VDR and TR AF-2 activity was seen in the absence of ligand or with hTAFII135(805 - 1083) (Figs. 6A, lane 10, and B, lane 5; data not shown). In contrast, expression of hTAFn135(1-1083) or (630-1083) had no significant effect on the activity of the ER, RXRoL, RXR~3, and RXR~ AF-2s (Fig. 3A, lanes 9-11, 16-18; data not shown), nor on activation by several activators that do not belong to the nuclear receptor superfamily (for example, see G4-TEF-1, Fig. 6B; see below), nor does it increase the amount of G4-NR chimeras expressed tran- siently (data not shown). Thus, expression of hTAFII135 does not result in a general nonspecific increase in trans- activation, but its effect is restricted to only a subset of the NR AF-2s.

The NR specificity of hTAFH135 differs from that of hTAFH28 , as its most potent effect was observed wi th the RAR and TR AF-2s, but not with the ER and RXR AF-2s, whereas the converse is true for hTAFH28 (May et al. 1996). However, as both hTAF.135 and hTAFH28 in- creased the activity of the VDR AF-2, we tested the effect of coexpression of both hTAF.s on VDR AF-2 activity.

Expression of hTAFH28 enhanced VDR AF-2 activity

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TAF.135 enhances RAR AF-2 activity

A

CV1 cells 40

Z 30 O m

cO F - n - < 0 ,.~ 20

Z 0 o

0 1 2 3 4 5

G4-RAR¢z(DEF) - 4- + + +

T -RA 4- 4- 4- 4- -

hTAFI I135(630-1083) - -

17m 5-TATA-CAT

B HeLa cells

40

30

20

10

0 1 2 3 4 5

- 4- ÷ 4- ÷

4- 4- 4- ÷ - = = ,==

C MPC11 cells

1 2 3 4 5 - 4- + ÷ ÷

÷ + 4. ÷ -

= = m

RARp2-CAT

D cos cells 1Ek

o_z l' 1 " '

Z O O 4.

E Cos ceils

0 , ~ O ~ ) 1 2 3 4 5 6

mRARc¢ . . . . . - 4- 4- 4- 4- 4-

T - R A - + + + - - - + 4- 4- -

hTAFI I135(630-1083) . . ~ . . .

Figure 5. (A-C} Effect of hTAF.135(630-1083) expression on RAR AF-2 activity in different cell types. Transfections and layout are as described in Fig.3A and contained 0, 2, or 5 lag of the hTAF.1351630-1083} expression vectors. (D) hTAF.135(630-1083) potentiates activation of the RARe2 promoter by endogenous NRs in Cos cells. Transfections contained 1 lag of the RAR~2-CAT reporter. (E) hTAF.135(630-10831 enhances activation by coexpressed wild-type mouse (m)RARc~. Transfections contained 1 lag of the RAR~2-CAT reporter and 0 or 250 ng of mRARc~ ex- pression vector as indicated.

fivefold, whereas expression of TAFII135 had a 10-fold effect (Fig. 7A, lanes 2,4,6). Coexpression of hTAF.135 with a suboptimal amount of hTAF.28 resulted in a greater increase in VDR AF-2 activity than that seen wi th hTAFu135 alone (e.g., cf. Fig. 7A, lanes 3, 5, and 7). In contrast, ER AF-2 activity was enhanced sixfold by hTAFH28 expression, but was not affected significantly by hTAF.135 (Fig. 7B, lanes 2-6). Furthermore, the ex- pression of TAFn135 did not increase ER AF-2 activity in the presence of TAFu28 (Fig. 7B, lanes 3,7,8). Thus, al- though hTAF. 135 and hTAFrI28 act together to enhance VDR AF-2 activity, no such additive effect was seen with the ER AF-2.

Expression of hTAFII135 enhances RAR AF-2 activity on a promoter containing a low affinity TA TA element

To investigate the molecular mechan i sm by which hTAF.135 enhances RAR AF-2 activity we used a pro-

moter in which the TATA element has been mutated to TGTA. This TGTA element is not recognized effi- ciently by endogenous TBP, but is recognized by the altered specificity mutan t TBP spm3 (Strubin and Struhl 1992). A luciferase reporter gene under the control of a promoter containing this mutated TGTA element and five G4-binding sites (17m5-TGTA-Luc; Keaveney et al. 1993) was transfected into Cos cells. This reporter was inactive even in the presence of coexpressed TBP spm3 (Fig. 8A, lane 1). The RARa AF-2 alone did not activate transcription from this promoter, whereas co- expression of TBP spm3 resulted in a 10-fold s t imulat ion of transcription (Fig. 8A, lanes 2,5). Coexpression of hTAFu135(630-1083 ) along with TBP spm3 resulted in a >25-fold increase in ligand-dependent RAR AF-2-acti- vated transcription compared to that observed with TBP spin3 and the RAR AF-2 alone (Fig. 8A, lanes 5,7-11). Similar results were obtained with full-length hTAF.135 (data not shown), whereas in control experiments, hTAF.135 alone or in combinat ion with TBP spm3 had no effect on transcription (Fig. 8A, lanes 3,4). Thus, ex-

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Mengus et al.

80-

70- 8 " ~ 40"-

o g30- o ~ 20-

10-

0 - - G4-RARrz(DEF) +

T -RA

G 4 - V D R ( D E )

D3

hTAFI1135 ( 6 3 0 - 1 0 8 3 ) -

1 7 m 5 - T A T A - C A T

+ + + + + - _ _

+ - _ + + - _ _

. . . . . + + +

. . . . . + + +

" O O

B 50 1 7 m 5 - T A T A - C A T

.~ 40 ~>~ 30

08 20

10

0 - G 4 - T R a ( D E ) + + + + + + _ _ _

+ T3 + + + . . . .

- G4-TEF-1 - -'F + +

h T A F I t 1 3 5 ( 6 3 0 - 1 0 8 3 ) - + - ~ -

t t t t t , t tt i 2 3 4 5 6 7 8 9 10

-O0 o O O O 0

1 2 3 4 5 6 7 8 9

Figure 6. (A-B) The hTAFII135(630-1083 ) mutant potentiates activation by the RAR, VDR, and TR AF-2s, but not by the TEF-1 AF. The layout is as in Fig. 3A. The presence or absence of the cognate ligands T-RA, 1,25(OH) 2 vitamin D3 (D3), and thyroid hormone (T3) in the transfections is indicated. Transfections 7-9 in B contained 100 ng of the G4-TEF-1 expression vector.

pression of hTAFH135 enhances RAR AF-2 activity in the presence of cotransfected TBP spm3.

However, coexpression of hTAFn135(630-1083 ) en- hanced RAR AF-2 activity even in the absence of TBP spm3 (Fig. 8A, lane 6). This s t imulat ion was analogous to that seen with TBP spm3 and the RAR AF-2, but was 20-fold less than that seen with the combination of all three components showing that in the presence of coex- pressed TAFn135 , the RAR AF-2 can activate transcrip- tion through the endogenous TFIID. Thus, hTAFn135 overexpression facilitates the formation of an initiation complex by the RAR AF-2 on the low affinity TGTA- containing promoter.

As observed wi th the RAR AF-2, the VDR and TR AF-2s alone did not activate transcription from the mu-

tated TGTA promoter (Fig. 8B, lane 2, and Fig. 8C, lane 1), but coexpression of TBP spm3 or hTAFn135(630- 1083) resulted in significant and comparable levels of activation (Fig. 8B, lanes 3-4 and Fig. 8C, lanes 2-3). However, in contrast to the RAR AF-2, coexpression of both hTAFn135 and TBP spm3 resulted in only a further threefold increase in VDR AF-2 activity (Fig. 8B, lanes 5,6), whereas no further increase was observed with the TR AF-2 (Fig. 8C, lanes 4,5). Analogous results were ob- tained with full-length TAFn135 (data not shown). All effects were dependent on the presence of the corre- sponding ligands (Fig. 8B, C) and in control experiments, expression of TBP and hTAFn135 had no significant ef- fect on promoter activity in the absence of the NR chi- meras. Thus, as observed with the RAR AF-2, TAFn135

Figure 7. (A-B) Both hTAFII28 and hTAFn135 enhance VDR AF-2 activity, whereas ER AF-2 activity is enhanced se- lectively by hTAFn28. Transfections con- tained 0, 2, or 4 lag of the hTAFn28 expres- sion vector and 0, 3, or 7 lag of the hTAFH135 expression vector as indicated. Transfections in lanes 7 and 8 contained the suboptimal 2 tag of the hTAFII28 expres- sion vector.

70 1 " 7 r n ~ - T A T A - ~ A T

~ " 50 O o9 4O

O >7 30

O O 2O

10

o 1 2 3 4 5 6 7 8

G 4 - V D R ( D E ) - + + + + + + +

hTAFII135(1-1083) . . . . . ~ _ ~

hTAFII28(1-211) - - ~ - + +

1 7 m 5 - T A T A - C A T

2 0

l o

o~ 0 5 o

0 ~ 1 2 3 4 5 6 7 8

G4-ER(EF) - + + + + + + +

hTAFII135(1-1083) . . . . ~ . ~

hTAFII28(1-211) = - ~ - - + +

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TAF.135 enhances RAR AF-2 activity

._>

"5 (O

L..

-=~

(9 r r

250.1 17m5-TGTA-Luc

30.

20,

10,

0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 TBPspm3 + - - + + - + + - + + . + . + +

B

18 - -

(0

"9 6

0 1 2 3 4 5 6 7 8 9 TBPspm3 - - + - + + + - + - + - + +

hTAF I I 135 (630 -1083 ) - - + + + ~ d l + ~ d l -

G4 -RARe . (DEF) - + - - + + + + + + + -

T -RA + + + + + + + + . . . . . . . .

G4 -ER(EF) . . . . . . . + + + + +

E2 . . . . . . . + + + + +

10 17m5-TGTA-Luc

>

rr

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 TBPsp rn3 - - + + + + - + - + + - + - + +

hTAF I I 135 (630 -1083 ) - + - . ~ d l + - - * ~ - - + ~ d l

G4 -TR( : z (DE)+ + + + + + . . . . .

T3+ + + ++ . . . . . . . . . . .

G4 -AP-2 . . . . . . + + + + +

G4 -Sp l . . . . . . . . . . . + + + + +

* ~ d l hTAF I I 135 (630 -1083 ) " " " , ~ d l - , , - - ,

G4 -VDR(DE) + + + + + + + + + . . . . .

D3 - + + + + + - " " " " " " "

G4 -RXR(~ (DE) . . . . . . . . . + + + + +

9c i s -RA . . . . . . . . . + + + + +

D , . . . .

. >

(~

L_

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15

TBPspm3 + - + + + - - + + + - - + + +

hTAF I I 135 (1 -1083 ) - + - ~ - + - ~ - +

G4 -RAR~(DEF) - + + + + . . . . . . . .

G4 -VP16 . . . . + + + + + - "

G4 -TEF-1 . . . . . . . . . . + + + + +

Figure 8. (A) Expression of TBP spm3 and hTAF.135 enhances activation by the RAR AF-2. Transfections contained 2 pg of the 17m5-TGTA-Luc reporter plasmid, 1 pg of the TBP spm3 expression vector, 250 ng of the G4-NR expression vectors, 0, 2, and 5 pg of the TAFIf135(630-1083 ) expression vector and the cognate ligands as indicated. After correction for the ~-galactosidase internal control, luciferase values were determined on a Berthold apparatus. (B) The layout is as as described in A. Transfections contained 250 ng of the G4-VDR and 1 pg of the G4-RXR expression vectors. (C-D) The layout is as described above. Where indicated, transfections contained 250 ng of the G4-Spl and G4-AP-2 expression vectors and 100 ng of the G4-VP16 and G4-TEF-1 expression vectors.

expression facilitates the formation of ini t iat ion com- plexes by the VDR and TR AF-2s on the low affinity TGTA-containing promoter.

Coexpression of hTAFH135 and TBP spm3 did not re- sult in activation by the ER or RXR AF-2s (Fig. 8, A, lanes 12-16, and B, lanes 10-14, respectively), nor did hTAFH135 potentiate activation by the unrelated G4- AP-2 and G4-Spl activators (Fig. 8C, lanes 7-16; note that the G4-Sp 1 chimera used in these experiments does not contain the region shown to interact with dTAFH 110 and hTAFH135; Gill et al. 1994; Tanese et al. 1996), al- though they were expressed at comparable levels to the G4-NR chimeras (data not shown). These results con- f irm that hTAFH135 acts selectively to enhance activa- tion by the RAR, VDR, and TR AF-2s.

The effect of TAFn135 expression on the activity of two further unrelated transcriptional activators was de- termined. Even in the absence of TBP spm3, the potent VP16 and TEF-I AFs s t imulated transcription (Fig. 8D, lanes 6,11 ) and coexpression of TBP spm3 increased their activity (Fig. 8D, lanes 8,13). In contrast, coexpression of

hTAF~135 either alone or together wi th TBP spm3 had little effect (Fig. 8D, lanes 7,9,10,12,14,15). These obser- vations show that the VP16 and TEF-1 AFs can use the endogenous TFIID to activate transcription from the TGTA promoter, and that their activity is not affected significantly by overexpression of hTAFH135. Thus, un- like the RAR, VDR, and TR AF-2s, these strong AFs are characterized by their abili ty to recruit efficiently cellu- lar transcription factors to the TGTA-containing pro- rooter in the absence of coexpressed hTAF~135.

Results similar, but not identical, to those described above were obtained wi th the NR chimeras in HeLa cells. The RAR AF-2 alone activated transcription in HeLa cells (Fig. 9, lanes 1--4) and coexpression of either TBP spm3 or hTAFH135(630-1083)enhanced this activa- tion by fourfold (Fig. 9, lanes 5-6). Thus, overexpression of hTAFII135 in HeLa cells also promotes activation by the RAR AF-2 through the endogenous transcription ma- chinery. However, the combinat ion of hTAFII135 and TBP spm3 enhanced RAR AF-2 activity only two- to threefold more than that observed wi th either of the two

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Mengus et al.

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Figure 9. Expression of hTAF~135(630-1083) potentiates RAR AF-2 activity in HeLa cells. Transfections were performed with the amounts of each plasmid indicated in Fig. 8A.

alone (lanes 7,8) and therefore, to a lesser extent than in Cos cells.

No activation was seen in HeLa cells with the ER AF-2 alone, whereas coexpression of TBP spin3 resulted in li- gand-dependent activation (Fig. 9, lanes 12,13,17-19). However, in contrast to the RAR AF-2, no significant ER AF-2 activity was seen in the presence of hTAF.135 and the activation seen in the presence of TBP spin3 was not increased significantly by the coexpression of hTAF.135 (lanes 14-16). Similarly, hTAFIr135 had no effect on the weak activation seen with G4-Spl and TBP spm3 (lanes 20-24).

Together these results in HeLa and Cos cells with the TGTA promoter confirm, using an independent promoter configuration and gene expression assay, the results obtained with the 17m5-TATA-CAT and RARe2 reporters showing that hTAF~135 can en- hance selectively activation by the RAR, VDR, and TR AF-2s.

D i s c u s s i o n

hTAFII135 is related to hTAFHI05 and dTAFu110, but has no yeast homolog

We have characterized previously interactions between the carboxy-terminal domain of hTAFH135 and other components of the TFIID complex. By protein affinity chromatography in vitro and immunoprecipitations of transfected Cos cell extracts, we have shown that hTAFII135 interacts with hTAFu250 and hTAFn20 , but not with hTAFI~100 or TBP (Mengus et al. 1995; Du- brovskaya et al. 1996). Here we describe the molecular cloning of full-length hTAFH135 and show that it en- hances RAR, VDR, and TR AF-2 activity in mammalian cells.

From cDNA and genomic fragments we have as- sembled an ORF encoding full-length hTAFH135 of mo- lecular mass identical to that of the endogenous HeLa

cell protein. Antibodies directed against two amino-ter- minal peptides deduced from the genomic sequence rec- ognize endogenous HeLa cell TAFn135 showing that this sequence is the bona fide TAFII135 ORF. Thus, the ORF reported here encodes a protein with electrophoretic and antigenic properties identical to those of endogenous HeLa cell TAFII135.

The sequence of the amino-terminal region of hTAFII135 reported here extends the partial cDNA se- quence reported by Tanese et al (1996), but differs from that reported by Dikstein et al. (1996). Comparison of our sequence with that of Tanese et al. indicates a dele- tion in the sequence of Tanese et al. between amino acids K228 and P261 (open brackets in Fig. 1A). Thus, the deleted sequence either corresponds to an intron, al- though there is no in-frame stop codon within this pu- tative intron, nor is it flanked by consensus splice donor or acceptor sites, or results from reverse transcription or sequencing artifacts attributable to the high GC content (>90%) in this region.

TAFH135 clearly belongs to a family of proteins, in- cluding hTAFH105 and dTAF.110, containing a con- served carboxy-terminal domain that mediates interac- tions with other TFIID subunits and the large subunit of TFIIA lHoey et at. 1993; Mengus et al. 1995; Dikstein et al. 1996), as well as the interactions of hTAFH135 and dTAF~110 with the oncoproteins E1A, SV40 large T-an- tigen, and HPV E7 (Geisberg et al. 1995; Mazzarelli et al. 1995). This carboxy-terminal domain is clearly the hall- mark of this family of proteins, conserved from Dro- sophila to humans. However, searches of the protein da- tabases failed to reveal any homologous yeast proteins (G. Mengus et al., unpubl.). Thus, although yeast con- tains homologs for almost all other mammalian TAFt,s (Reese et al. 1994; Poon et al. 1995; Klebanow et al. 1996; Moqtaderi et al. 1996a,b; Walker et al. 1996), there ap- pears to be no yeast homologs of the TAFH135,TAFu105, TAF. 110 family.

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TAF.135 enhances RAR AF-2 activity

TAFH135 is a specific coactivator for a subset of NRs in mammalian cells

We show that hTAF,135 can enhance transactivation by several NR AF-2s in mammalian cells, hTAF.135 en- hanced the activity of the NR AF-Zs present in G4 chi- meras and enhanced activation of the RAR[32 promoter by endogenous and ectopically expressed wild-type RAR. This enhancement required the integrity of the RAR AF-2 AD core showing that hTAF.135 did not act on an unknown AF-2-independent AF located in the receptor LBD. In contrast, expression of hTAF~135 had no effect on the activity of the ER and RXR AF-2s, and it did not potentiate the effect of several unrelated activators (VPl6, TEF-1). Interestingly, although no TAF.135 ho- molog or NRs exist in yeast, ectopically introduced RAR AF-2 can function in this organism. Similarly, other pro- teins that are NR coactivators in mammalian cells, for example p300/CBP, also have no homolog in yeast (Eck- ner 1996), suggesting that the cofactors, which mediate RAR AF-2 activity in yeast, are distinct from those in mammalian cells.

TAF.135 specifically enhances activation by the class II NRs, RAR, TR, and VDR, which preferentially form heterodimers with RXRs. These NRs also share the abil- ity to repress transcription in the absence of their cog- nate ligands and, at least for the RAR and TR, interact with corepressors such as a nuclear receptor corepressor (N-CoR) and SMRT (silencing mediator of retinoid and thyroid hormone receptors) (Chen and Evans 1995; H6r- lein et al. 1995). On the other hand, the ER, whose ac- tivity is enhanced preferentially by hTAFH28 (May et al. 1996), functions as a homodimer and does not act as a ligand-independent repressor. The differential ability of the NRs to respond to TAFII135 therefore, is reminiscent of other functional differences noted among these recep- tors. Thus, TAF,135 may be a specific coactivator for certain class II NRs, whereas hTAFH28 may enhance the activity of the class I NRs preferentially. However, both of these TAF.s enhance VDR AF-2 activity and their coexpression results in an additive effect.

Enhancement of NR AF-2 activity required the integ- rity of a hTAFII135 domain located within or overlapping with amino acids residues 713-805. This region is lo- cated between the two highly conserved domains of the TAFH135,TAF.105,TAFHl10 proteins, but is itself poorly conserved. Accordingly, expression of dTAF, 110 had no significant effect on RAR AF-2 activity (G. Men- gus, et al., unpubl.), showing that vertebrate TAFHs may have evolved to perform specific functions not found in other metazoans or yeast.

Possible molecular mechanisms for TAFIf135 function

Although hTAF~135 acts as a coactivator for the RAR AF-2, we were unable to detect RAR-hTAFH135 interac- tions either in transfected Cos cells or in yeast two hy- brid assays, whereas control experiments revealed strong hTAF.135-hTAF.20 interactions (our unpublished

data). Nevertheless, we show that TAFI~135 is function- ally limiting for the activity of certain NR AF-2s in several mammalian cell lines and that the degree to which TAF,135 expression enhances AF-2 activity cor- relates inversely with TAFH135 levels in these cells. A stronger enhancement is observed in Cos cells that con- tain the lowest amounts of TAFII135, whereas the ef- fect is weaker in HeLa and MPC11 cells where TAF,135 is relatively more abundant. As ectopically expressed hTAFII135 associates with endogenous TFIID (Tanese et al. 1996), it is likely that the enhancement of NR AF-2 activity results from an increase in the amount of TFIID complexes containing TAF. 135, a situation analogous to that previously observed with TAFH28 in Cos cells (May et al. 1996). These observations support our previous pro- posal that substochiometric TAFHs present in only a sub- set of TFIID complexes may mediate the effect of certain transactivators (Brou et al. 1993; Jacq et al. 1994). Inter- estingly, the related TAF.105 is also present in substo- chiometric amounts in TFIID from B cells (Dikstein et al. 1996).

To address the molecular mechanism of hTAF,135 function, we used a promoter in which the TATA ele- ment has been replaced by a TGTA element to which the endogenous TFIID binds with only low affinity. With this reporter, coexpression of the cognate TBP spm3 mu- tant and TAF.135 resulted in strong activation by the RAR AF-2. However, coexpression of hTAF.135 in the absence of TBP spm3 also enhanced RAR AF-2 activity showing that TAF,135 allows RAR AF-2-dependent for- mation of initiation complexes containing endogenous TFIID, thereby compensating for its low affinity for the TGTA element. When coexpressed with TAF.135, the RAR AF-2 behaves like strong AFs, exemplified here by VP16 or TEF-1, which activate transcription from the TGTA-containing promoter in the absence of cotrans- fected TBP spm3, irrespective of TAF,135 overexpres- sion. Considering the importance of the recruitment of TFIID in transcriptional activation (Klages and Strubin 1995; Chatterjee and Struhl 1995; Chi and Carey 1996; Stargell and Struhl 1996b), the reported interactions be- tween these strong AFs and TBP or other components of the preinitiation complex (Ingles et al. 1991; Lin et al. 1991; Gruda et al. 1993; for review, see Tjian and Mani- atis 1994), may suffice to allow efficient recruitment of endogenous TFIID to the TGTA-containing promoter. In contrast, for the RAR, VDR, and TR AF-2s, overexpres- sion of TAF.135 would be required for TFIID to be re- cruited efficiently.

Several possible molecular mechanisms may be envis- aged to explain how TAF.135 could enhance recruit- ment of TFIID by the NR AF-2. In view of the observed specificity of TAFH135 for certain NRs and the lack of evidence for direct interactions with these NRs, it is tempting to speculate that TAF.135 may interact with putative RAR-, VDR-, and TR-specific TIFs, thereby en- hancing the recruitment of TFIID. Further experiments will be required to identify interaction partners of TAF,135 and lead to a better understanding of the mo- lecular basis of its coactivator activity.

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Mengus et al.

Materials and m e t h o d s

Purification of HeLa cell TFIID and cloning of hTAF,135

Nuclear extract and TFIID preparation was as described (Brou et al. 1993; Chaudhary et al. 1994). Immunopurified TFIID was dialyzed against buffer containing 5 mM NaC1, 0.5 mM Tris-HC1 (pH 7.9), 5 lUM DTT, and 0.01% SDS for 6-8 hr. The TFIID was then lyophilized and resolved by SDS-PAGE. Pro- teins were electroblotted overnight in 50 mM Tris, 50 mM bo- ric acid onto a PVDF membrane (Millipore Immobilon P, 0.45 ~M), and stained briefly with Coomassie blue. hTAFH135 was excised and digested in situ on the membrane with trypsin. The eluted peptides were then separated by reverse phase high-pres- sure liquid chromatography (HPLC) and microsequenced. De- generate oligonucleotides from peptides IMLTTPQQIQLNPL, AT(C/T)ATG(C/T)T(C/G) AC(A/C/T)AC(A/C/T)CC(A/C/T) CA(A / G)CA(A / G)AT(C / T)CA{A / G)(C / T)T(C / G)AA(C / T)CC, and AATVTSALQP, GC(A/C/T)GC(A/C/T)AC(A/C/T)GT(C/ G/T)AC(A/C/T)TC(C/T)GC(A/C/T) CT(C/G/T)CA(A/G)CC: GC (A/C/T)GC(A/C/T)AC(A/C/T)GT(C/G/T)AC(A/C/T)TC (C/T)GC(A/C/T) TTGCA(A/G)CC: GC(A/C/T)GC(A/C/T) AC(A / C / T)GT(C / G / T)AC(A / C / T)AGCGC(A / C / T)TTGCA (A/G)CC: GC(A/C/T)GC(A/C/T)AC(A/C/T)GT(C/G/T)AC(A /C/T)AGCGC(A/C/T)CT(C/G/T) CA(A/G)CC were synthe- sized, [a2P]-5'-end labeled, and used to screen a HeLa cell cDNA library in ~ ZAPII (Stratagene). The filters were washed in 6x SSC at 45°C or 50°C and subjected to autoradiography. Four clones hybridizing to oligonucleotides derived from both pep- tides were purified and in vivo excision was performed. The cDNA inserts were sequenced completely with internal primers using an Applied Biosystems automated DNA sequencer. The resulting data were analyzed, and database searching was per- formed using the Genetics Computer Group (GCG) software (University of Wisconsin) sequence analysis programs. To iso- late full-length hTAFu135 , PCR amplification was used to gen- erate a 32p-labelled probe from nucleotides 1050-1456. This probe was used to screen 106 phage from a human placental genomic DNA library. Filters were washed at 60°C in 0.2x SSC and three positive clones were purified. A 4.7-kb BglII-HindIII fragment, which hybridized to an oligonucleotide correspond- ing to amino acids 372-378, was cloned and sequenced. Because of the high GC content, automated DNA sequencing was per- formed at 60°C in the presence of 10% DMSO.

Construction of recombinant plasmids

To construct the expression vector for full-length hTAFH135 , the cDNA was first modified by site-directed mutagenesis to introduce XbaI and HindIII sites between positions 1224-1236 without altering the amino acid sequence (5'-ACCCAGAGC- CTGTCCCGGACGCCC-3' changed to 5 '-ACCCAAAGCTT- GTCTAGAACCC-3' , restriction sites shown in boldface type). The resulting clone was further modified to introduce a BamHI restriction site after the stop codon. The modified plasmid was digested with HindIII and BamHI and the cDNA fragment pu- rified. The 5'-end of the hTAFI~135 coding sequence was gener- ated by PCR from the genomic fragment using a 5' primer con- taining an EcoRI site and a consensus Kozak sequence, and a 3' primer with a HindIII site at a position identical to that intro- duced in the cDNA. PCR was perfomed with Vent DNA poly- merase in thermopol buffer containing 10% DMSO, 5 mM KC1, 0.15 mM C7-deaza-dGTP, and 0.05 mM dGTP. The PCR frag- ment was cloned between the EcoRI and HindIII sites of the pXJ40 expression vector. The resulting pXJ40 clone was then digested with HindIII and BglII and the HindIII-BamHI cDNA

fragment was introduced to generate a full-length hTAFH135 ORF. The other hTAF~135 expression vectors were generated by PCR using appropriately located primers. For cloning in pXJ42 the 5' primer contained a BamHI site, a consensus Kozak sequence, and an ATG, and the 3' primer an EcoRI restriction site; for the pET15 construct the 5' primer contained an NdeI site and the 3' priner a BamHI restriction site; for cloning in pAT6, the primers contained NheI restriction sites; the proteins expressed from the pAT6 vector are B 10-tagged, with B 10 being the ER epitope for the mAb B10. The TBP spm3, G4 chimera expression vectors, and reporter plasmids were as described pre- viously (Tora et al. 1989; Seipel et al. 1992; NagpaI et al. 1992, 1993; Hwang et al. 1993; Keaveney et al. 1993; Durand et al. 1994; Mengus et al. 1995; May et al. 1996 and references therein).

Transfections, CAT, luciferase assays, and immunoprecipitations

Cos-l, CV1, MPCl l , and HeLa cells were transfected by the calcium phosphate precipitate technique. In addition to the ex- pression vectors or reporters described in each figure, all trans- fections contained 1 ~g of the luciferase reporter pRSV-Luc as internal standard for CAT assays or 2 ~g of pXJ-LacZ as internal standard for luciferase assays, and pBSK- DNA as carrier. Trans- fections were performed in dextran-charcoal-treated medium and tigands were added [50 nM T-RA, 9cis-RA, and 3,5,3'-tri- iodo-L-thyronine (T3), 100 nM 1,25(OH)aD3, and 15 nM E2] at the same t ime as the DNA-calc ium phosphate coprecipitate. Cells were harvested 48 hr after transfection and luciferase, ~3-galac- tosidase, and CAT assays were performed by standard proce- dures. Quantitative phosphorImager analysis was performed on a Fujix BAS 2000 apparatus. In all cases, similar results (+20%) were obtained in at least three independent transfections and the results of typical experiments are shown in the figures.

Immunoprecipitat ions were performed essentially as de- scribed (Mengus et al. 1995). After transfections, cell extracts were prepared by three cycles of freeze-thaw in 100 ~1 of buffer A [50 mM Tris-HC1 (pH 7.9), 20% glycerol, 1 mM dithiothreitol, and 0.1% NP-40] containing 0.5 M KCI and 2.5 ~ag/ml of leu- peptin, pepstatin, aprotinin, antipain, and chymostatin. Ex- tracts were mixed with -1 ~ag of the monoclonal antibodies and 50 ~1 of protein G-Sepharose and incubated at 4°C for 2 hr with rotation. The precipitated proteins were washed four t imes with 1 ml of buffer A containing 1.0 M KC1 and once with buffer A containing 0.1 M KC1. The proteins were then detected on West- ern blots using an Amersham ECL kit.

Antibody preparation

mAbs against TBP (3G3, 2C1) and TAFH55 (19TA) were as de- scribed previously (Brou et al. 1993; Lescure et al. 1994; Lavigne et al. 1996). mAb 20TA was raised against the pET-expressed carboxy-terminal domain of hTAFII135 purified from Escherich- ia coli by affinity chromatography on nickel NTA ÷ agarose (Pharmacia) essentially as described (Brou et al. 1993; Lescure et al. 1994). Peptides P1 and P2 were coupled to ovalbumin and injected into rabbits as described (May et al. 1996).

A c k n o w l e d g m e n t s

We thank Adrien Staub for peptide sequencing of hTAFH135, M. Keaveney and H. Stunnenberg for the gifts of recombinant plas- raids, S. Vicaire and P. Hamman for DNA sequencing, Y. Lutz and the monoclonal antibody facility, G. Duval for the rabbit

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TAFH135 enhances RAR AF-2 activity

polyclonal antibodies, J.M. Gamier and T. Lerouge for cDNA and genomic libraries, the staff of cell culture and oligonucleo- tide facilities, P. Eberling and D. Stephane for peptide synthesis, B. Boulay, J.M. Lafontaine, R. Buchert, and C. Werle for illus- trations, Roussel-Uclaf for providing 1,25(OHJ2D~. G. Mengus is supported by a fellowship from the Ligue Nationale contre le Cancer and M. May by a grant from the Deutsche Forschungsge- meinschaft (DFG). This work was supported by grants from the CNRS, the INSERM, the Centre Hospitalier Universitaire Re- gional, the Ministhre de la Recherche et de la Technologie, the Association pour la Recherche contre le Cancer, and the College de France.

The publication costs of this article were defrayed in part by payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 USC section 1734 solely to indicate this fact.

N o t e

The nucleotide sequence reported in this paper has been as- signed accession no. Y11354 in the EMBL database.

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