Enabling Leading Energy Efficient, Ultra High Dense and ...

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1 * Other names and brands may be claimed as the property of others. Copyright © 2009, Intel Corporation. Enabling Leading Energy Efficient, Ultra High Dense and Large Scale Supercomputing towards Exascale

Transcript of Enabling Leading Energy Efficient, Ultra High Dense and ...

Page 1: Enabling Leading Energy Efficient, Ultra High Dense and ...

1 * Other names and brands may be claimed as the property of others. Copyright © 2009, Intel Corporation.

Enabling Leading Energy Efficient, Ultra High

Dense and Large Scale Supercomputing towards Exascale

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2 * Other names and brands may be claimed as the property of others. Copyright © 2009, Intel Corporation.

Outline

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Specialization. Since 2009

Development of innovative ultra-high density

energy efficient HPC solutions

delivering unique features and addressing

specific end-user needs

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Strong Market Position

•Source: Top500.org (November, 2014)

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Strong Market Position

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HPC Industry Records

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Top projects

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South Ural State University

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Projects in JSCC RAS and SUSU

“Both SUSU and JSCC RAS are state of the art high performance computing centers with competent staff running the highly ranked Top500 and Green500 powerful and energy efficient supercomputers. The facilities both use RSC Tornado based systems with innovative liquid cooling and newest Intel Xeon Phi coprocessors which provide impressive high performance capabilities and energy efficient solutions to solve very demanding science research and engineering problems.” – said Jack Dongarra, the world famous HPC expert.

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13 * Other names and brands may be claimed as the property of others. Copyright © 2009, Intel Corporation.

Po

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sit

y

Time

2009-10 35 TFLOPS

52 kW per rack 96 nodes

2011-today 66,3 TFLOPS

Up to 70 kW per rack 128 homogeneous nodes

2012-today 211 TFLOPS

Up to 100 kW per rack 72 heterogeneous nodes

RSC Technology Evolution 2013-today 1.2 PFLOPS

400+ kW per rack 1024 nodes

RSC Tornado

RSC PetaStream

World Record

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Two worlds. State of Art.

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RSC Tornado cluster solution

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RSC Tornado Extensions

= +

• HPC Expansion Pack: up to 2 Co-processors and IB • VDI Expansion Pack: fast PCIe SSD and 3D video • BigData Expansion Pack: enhanced storage,

performance/$ • Security&Protection Expansion Pack • And others…

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World record again

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RSC PetaStream outline

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RSC PetaStream™ Cabinet •

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= 9x

and ½ energy to solution

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Ongoing evaluation

Code/app Developer/ partner

Area/Method

MAGMA MIC ICL University of Tenessee

Dense linear algebra

AstroPhi Institute of Computational Mathematics and Mathematical Geophysics SB RAS, Novosibirsk, Russia

Astrophysics, gas dynamics

GROMACS St-Petersburg Polytechnic

Molecular dynamics

CACTUS University of Lousiana

Astrophysics

GAMESS Chem. Dept. Lomonosov MSU

Quantum Chemistry

Pikador NNSU Patrice-In-Cell

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MAGMA MIC Performance

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MAGMA MIC Performance

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Alexey Shvetsov, FSBI Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, GROMACS Developer

Evgeniy Petukhov, St.Petersburg State Polytechnic University

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Nucleosome and its different assembly states (such as

hexasome, tetrasome) in water (approx. 1M atoms).

Nucleosomes are essential structural and regulatory element for

DNA packaging in eukaryotic cell nuclei.

Such simulations help better understanding of fundamental

mechanisms of gene transcription regulation.

System features: large amount of volume distributed point

charges (~1/6rd of total number of atoms)

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Nucleosome Tetrasome

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Version: 5.1-dev (git master branch) Patches: bitmap (allows arbitrary number of omp threads) Tools and libraries: Intel® Cluster Studio XE 2015 (C, C++, MKL,

MPI) Standard build options

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Being tested on Jaguar RF showed better scalability (up to tens of thousands of cores), but for this case PME gives more performance

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PetaStream drives to Exascale

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Thanks

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