Disease Systems Biology
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Transcript of Disease Systems Biology
![Page 1: Disease Systems Biology](https://reader036.fdocuments.us/reader036/viewer/2022081602/554e89c8b4c90526358b4941/html5/thumbnails/1.jpg)
Disease Systems Biology
Lars Juhl Jensen
![Page 2: Disease Systems Biology](https://reader036.fdocuments.us/reader036/viewer/2022081602/554e89c8b4c90526358b4941/html5/thumbnails/2.jpg)
signaling networks
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proteomics
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NetPhorest & NetworKIN
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Miller, Jensen et al., Science Signaling, 2008
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Linding, Jensen, Ostheimer et al., Cell, 2007
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other modifications
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association networks
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STRING & STITCH
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Kuhn et al., Nucleic Acids Research, 2010
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data integration
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Korbel et al., Nature Biotechnology, 2004
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Jensen & Bork, Science, 2008
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Letunic & Bork, Trends in Biochemical Sciences, 2008
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more entity types
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text mining
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>10 km
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Reflect
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augmented browsing
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Pafilis, O’Donoghue, Jensen et al., Nature Biotechnology, 2009
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association mining
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web services
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patient records
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text and registry data
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drugs
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side effects
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diseases
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patient trajectories
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patient stratification
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genotype vs. phenotype
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ReflectSune Frankild
Heiko Horn
Evangelos Pafilis
Michael Kuhn
Reinhardt Schneider
Sean O’Donoghue
Patient recordsFrancisco Roque
Peter Bjødstrup Jensen
Henriette Schmock
Marlene Dalgaard
Massimo Andreatta
Thomas Hansen
Karen Søeby
Søren Bredkjær
Anders Juul
Thomas Werge
Søren Brunak
STRING & STITCHDamian Szklarczyk
Andrea Franceschini
Michael Kuhn
Milan Simonovic
Alexander Roth
Pablo Minguez
Tobias Doerks
Jean Muller
Manuel Stark
Samuel Chaffron
Chris Creevey
Philippe Julien
Jan Korbel
Berend Snel
Martijn Huynen
Christian von Mering
Peer Bork
NetPhorest & NetworKINRune Linding
Heiko Horn
Martin Lee Miller
Gerard Ostheimer
Francesca Diella
Claus Jørgensen
Karen Colwill
Jing Jin
Pavel Metalnikov
Vivian Nguyen
Adrian Pasculescu
Marina Olhovsky
Michele Tinti
Lei Li
Marilyn Hsiung
Sirlester Parker
Jennifer Bordeaux
Thomas Sicheritz-
Pontén
Jes Alexander
Jin Gyoon Park
Stefan Knapp
Nikolaj Blom
Leona D. Samson
Rob Russell
Peer Bork
Shawn Li
Gianni Cesareni
Benjamin Turk
Søren Brunak
Michael Yaffe
Tony Pawson
”we” are many people