BVO Research Summary

88
Ice at Room Temperature: A NMR Investigation of H 2 O in Materials under Ambient Conditions Bernie O’Hare The Pennsylvania State University

description

A short description of some of my experience in NMR.

Transcript of BVO Research Summary

Page 1: BVO Research Summary

Ice at Room Temperature: A NMR Investigation of H2O in Materials

under Ambient Conditions

Bernie O’Hare

The Pennsylvania State University

Page 2: BVO Research Summary

Outline

• Introduction into NMR• Our Hypothesis• Our Work• Introduction to Deuterium NMR

(brief) and Relaxation• Our Results• Our Conclusions

Page 3: BVO Research Summary

NMR Active Nuclei

Page 4: BVO Research Summary

Nuclear Magnetic Resonance

• First Observed by Isidor Rabi in 1938, later refined by Felix Bloch and Edward Purcell in 1946.

• NMR allows one to “tune in to” the desired nucleus by choosing the correct frequency (1-1000 MHz), because each nucleus has a specific Larmor frequency at a given magnetic field.

• NMR is not a sensitive technique. NMR requires a minimum concentration of ~1mM and a minimum sample volume of ~1 ml. Because of this, we need large surface area samples to study molecules at interfaces.

• Despite the above limitation, NMR is the one of the most powerful technique known for characterization of molecular structure and dynamics.

Page 5: BVO Research Summary

Modern NMR Spectrometer

• 1H Larmor frequency is 850 MHz

• ~ 20 Tesla Field• Used mainly for

biological macromolecules and protein structure/function studies

Page 6: BVO Research Summary

I Had Nothing to do with the Second Quench

Page 7: BVO Research Summary

SEE!

The Germans would have never been this happy with me.

Page 8: BVO Research Summary

What is NMR

No External Bo FieldExternal Bo Field Applied in the Z direction.

Bo

Net Magnetization

Page 9: BVO Research Summary

What Can NMR do?

• Molecular structure assignments for both small molecules and proteins up to 50 kDa in size in both the liquid and solid state.

• Dynamic studies of molecular translational diffusion.• Dynamic studies of rotational diffusion via NMR

relaxation.• Dynamics of solid state motion via NMR relaxation.• NMR can image the body or other objects given

sufficient gradients in known directions.• Analytical work by “spin counting” to ascertain the

amount of a given nuclei in a sample

Page 10: BVO Research Summary

NMR• Nuclear spins are aligned with or against the main magnetic field

axis.– With the magnetic field is a low energy state.– Against the magnetic field is a high energy state.– Slightly more spins are aligned with the magnetic field in the

lower energy state, but not many.

Magnetic Field Increasing

********

*********

Page 11: BVO Research Summary

Examples of NMR

Page 12: BVO Research Summary

The focus of this work utilizes NMR relaxation.

T1 NMR experiment of the 2H in 2H2O

1.bp.blogspot.com/.../y1gg-u9u2rM/s400/t1.jpg

Page 13: BVO Research Summary

Phase Diagram of H2O

http://www.lsbu.ac.uk/water/images/phase.gif

Page 14: BVO Research Summary

Materials Research with NMR

Page 15: BVO Research Summary

Kanemite (NaHSi2O5•3H2O)

• Atomic view of the kanemite crystal

• 10 Å interlayer spacings

• Can fit 3-4 layers of molecular H2O

• Naturally occurring crystal

GARVIE ET AL.: STRUCTURE OF NaHSi2O5·3H2O, Americ. Mineral 1999.

Page 16: BVO Research Summary

(Na) Zeolite-A (Na12Al12Si12O48•27H2O)

• Atomic view of (Na) Zeolite A• Supercage ~ 14 Å• Sodalite cages ~ 9 Å

• About 5 layers of molecular H2O can fit in the supercage.

• About 3 layers of molecular H2O can fit in the sodalite cages.

• Naturally occurring zeolite crystal.

http://www.zeolitepure.co.uk/USERIMAGES/Zeolite(1).jpg

Page 17: BVO Research Summary

Tricalcium Silicate Ca3SiO5 (C3S)

• Fully hydrated C-S-H

• Pure synthesized C3S crystals

Page 18: BVO Research Summary

1. Molecular dynamics simulations, scanning polarization force microscopy (SPFM), and sum frequency generation spectroscopy have shown the formation of room temperature “ice-like bilayers” on the surface of muscovite mica1, a hydrophilic aluminosilicate that can be used to “seed” clouds.

2. Room temperature solid state water is also commonly found in crystalline hydrates.2

3. At elevated pressure and temperatures slightly above the freezing point of pure water, solid state water is found as well in clathrate hydrates.3

Previous evidence for solid state water at room temperature:

1. (a) Hu, J; Xiao, X.-d.; Ogletree, D. F.; Salmeron, M. Surf. Sci. 1995, 344, 221-236. (b) Hu, J; Xiao, X.-d.; Ogletree, D. F.; Salmeron, M. Science 1995, 268, 267-269. (c) Odelius, M.; Bernasconi, M.; Parrinello, M. Phys. Rev. Lett. 1997,

78, 2855-2858. (d) Salmeron, M.; Bluhm, H. Surf. Rev. and Lett. 1999, 6, 1275-1281. 2. (a) Weiss, A.; Weiden, N. In Advances in Nuclear Quadrupole Resonance, Smith, J. A. S., Ed. Heyden: 1980, Vol. 4,

pp. 149-248. (b) Reeves, L. W. In Progress in NMR Spectroscopy, Emsley, J. W.; Feeney, J.; Sutcliffe, L. H. Eds. Pergamon:1969, Vol. 4, pp. 193-234.

3. (a) Bach-Verges, M.; Kitchin, S. J.; Harris, K. D. M.; Zugic, M.; Koh, C. A. J. Phys. Chem. B 2001, 105, 2699-2706. (b) Kirschgen, T. M.; Zeidler, M. D.; Geil, B.; Fujara, F. Phys. Chem. Chem. Phys. 2003, 5, 5247-5252.

Page 19: BVO Research Summary

We have used 2H NMR techniques, isothermal calorimetry, and FT-IR to investigate water (2H2O and 1H2O) in a variety of hydrated materials:

Kanemite, Zeolite A, Silicalite, Montmorillonite, Silica Gel, Porous Glass, Hydrated Tricalcium Silicate (cement), Hydroxyapatite, Cellulose, Nafion, and Sulfonimide substituted polyphosphazenes

We have found room temperature solid state water in all of these samples! We have publishedsome of the work in the papers below:

A. J. Benesi, M. W. Grutzeck, B. O’Hare, and J. W. Phair, “Room Temperature Solid Surface Water with Tetrahedral Jumps of 2H Nuclei Detected in 2H2O-Hydrated Porous Silicates”, J. Phys. Chem. B, 108, 17783-17790, 2004.

A. J. Benesi, M. W. Grutzeck, B. O’Hare, and J. W. Phair, “Room Temperature Ice-Like Water in Kanemite Detected by 2H NMR T1Relaxation”, Langmuir, 21, 527-529, 2005.

B. O’Hare, M.W. Grutzeck, D.B. Asay, S.H. Kim, and Alan J. Benesi “Solid State Water Motions Revealed by Deuterium Relaxation in 2H2O –Synthesized Kanemite and 2H2O Hydrated Na+ -Zeolite A”, Journal of Magnetic Resonance, 195, 85-102, 2008.

Page 20: BVO Research Summary

Why we use 2H NMR?

Because: We use 2H2O to hydrate our samples…

Page 21: BVO Research Summary

2H NMR well suited for studying molecular motion because:

Quadrupolar interaction dominates, so other interactionscan be ignored.

“Rigid” qcc = e2qQ/h = 160-300 kHz gives rise to characteristic powder pattern in spectrum (shown below for :

3/2 qcc

¾ qcc

Page 22: BVO Research Summary

There is a direct link between the observed 2H spectral frequency and the orientation of the (quadrupolar PAS) covalent bond relative

to the 2H nucleus and the applied magnetic field. Because all possible angles are found in a powdered sample, this gives rise to the powder pattern.

O

2H

B0

Because of this sensitivity

to motion, 2H NMR can be used to

characterize motions with frequencies ranging from ~1 x10-2 s-1 < < 1015 s-1.

Page 23: BVO Research Summary

Deuterium NMR and Motion

• Deuterium NMR is very sensitive to motion

– Motions << Qcc are considered rigid– Motions ~ Qcc are considered intermediate– Motions >> Qcc are considered fast

Qcc ≡ e2qQ/h

Page 24: BVO Research Summary

Types of Motion

• Low Symmetry• C2 rotations• C3 rotations• Diffusion in a cone• Tethered motion

• High Symmetry• Octahedral jumps• Tetrahedral jumps

Page 25: BVO Research Summary

Deuterium Motion Examples

Page 26: BVO Research Summary

d5- Benzoic Acid

COOH

DD

D D

D -At 22 deg C the phenyl ring flips are not apparent.

-All that is observed is a static powder pattern.

-Motion << Qcc

Page 27: BVO Research Summary

Phenyl Ring Flips (Calculated)

-200000 -100000 100000 200000

100

200

300

400

500

600

700

D D

DD

R

X -The deuterons undergo 180o rotations as the phenyl ring rotates

-This is a common occurrence in proteins and other large molecules with phenyl groups

Page 28: BVO Research Summary

d18- HMB

CD3

CD3

CD3D3C

D3C

D3C

Methyl groups experience fast 3 site jumps and produce a “mini” powder pattern as do other low symmetry fast motions.

Motion >> Qcc

Page 29: BVO Research Summary

d4-L-Alanine (Slow Pulse)

2 types of motion2 types of deuterons -fast 3 site jumps -slow 1 site motion

Motion >> Qcc Motion << Qcc

D3C COOH

H2N D

Page 30: BVO Research Summary

Vertical Expansion of L-Alanine

This expansions showsthe static pattern moreclearly

Motion << Qcc

D3C COOH

H2N D

Page 31: BVO Research Summary

Frozen D2O

The deuterons in ice slightly below its melting point exhibit highly symmetric, fast tetrahedral jumps which produce isotropic like lineshapes.

Motion >~ Qcc

Page 32: BVO Research Summary

D2O ice, -120 C

D2O ice, 0 Cfreezing pt. = 3.84 C,qcc

D2O liquid, 21 C >> qcc

qcc

2H quadrupole echo spectra of 2H2O (D2O):

This is why everyonemissed room tempsolid state water

Page 33: BVO Research Summary
Page 34: BVO Research Summary

Earlier Models

– Pure tetrahedral jumps. This model will work, but only at ONE given temperature, not very robust.

– Tetrahedral jumps on an pseudo-isotropic sphere. These 2 motions were not in fast exchange, so simple addition of the spectral densities was incorrect.

Page 35: BVO Research Summary

Our Relaxation Model is Simple and Robust

(1/Tn) Observed = XC2 (1/Tn )C2 + Xtet (1/Tn )tet

The relaxation times are calculated using the conventions of Mehring and are based on the formalism developed by Torchia and Szabo

The C2TET Relaxation Model

Page 36: BVO Research Summary

Spectral Densities Describing the Tetrahedral Relaxation

Page 37: BVO Research Summary

Spectral Densities Describing the C2 Relaxation

Page 38: BVO Research Summary

Calculating Spectral Densities

• Using the appropriate jump matrix (i.e. C2 or tetrahedral), one can calculate the pertinent spectral densities for any type of motion

• This is based on the formalism of Mehring but also heavily on Torchia and Szabo

Page 39: BVO Research Summary

T1 Relaxation Model for Zeolite-A compared to experimental

Page 40: BVO Research Summary

Low Temperature T1 Data

Page 41: BVO Research Summary

T1 Data for kanemite

Page 42: BVO Research Summary

Additional Evidence

Page 43: BVO Research Summary

Brief Comparison of the Arrhenius versus the Eyring Plot

GB RTk T

k eh

‡aE

RTk Ae

•They are essentially equivalent

•The Eyring plots ΔH‡ is the Arrhenius Ea.

•The ΔS‡ is entropic data not available from the Arrhenius equation

Arrhenius Equation Eyring Equation

Page 44: BVO Research Summary

Eyring Plots of Zeolite-A

Activation parameters are determined from the dynamic lineshape simulation data

Activation parameters are determined by high temperature T1 experimental data

1ln ln Bkk H S

T R T h R

‡ ‡

The plot of ln k/T versus 1/T gives a straight line with slope of

from which the enthalpy of activation can be derived and with intercept

from which the entropy of activation is derived.

H

R

ln Bk S

h R

Page 45: BVO Research Summary

FT-IR Support

Page 46: BVO Research Summary

Tricalcium Silicate • We propose the C2TET model to also exist in this system.• At any given time we can calculate the fraction of solid water to the

fraction of “free” liquid water.

Page 47: BVO Research Summary

• We propose that the initial strength in cement is due to the hydrogen bridges formed during the acceleratory period facilitating a phase change of bulk water to solid state water.

Page 48: BVO Research Summary

Isotope Effect on Setting of C3S

Vicat Needle ASTM Test

Page 49: BVO Research Summary

Conclusions• Deuterium NMR relaxation shows our C2TET solid state

water model to be consistent and robust over a wide temperature range

• VT-2H lineshape analysis is consistent with our C2TET model

• Eyring plots show that we have activation parameter results consistent with the C2TET model

• FT-IR gives us independent support of a solid state type of water in these materials

• Solid state water is at least partially responsible for the initial strengthening of cement

Page 50: BVO Research Summary

NMR at Penn State

Page 51: BVO Research Summary

The Bruker Biospin Lloyd Jackman Highfield NMR Facility

Page 52: BVO Research Summary

AV-III-600

Page 53: BVO Research Summary

AV-III-500

Page 54: BVO Research Summary

High field Hardware• All three instruments are equipped with four

channels making the implementation of 2H decoupling quite simple for biomolecules.

• All three are equipped with the latest software, TopSpin 2.1.with patch level 4.

• All three have the latest series cryoprobes and cryoplatforms (All CTI versions 5mm)

• The 850 has microimaging capabilities as well as a fast MAS probe included with the CTI probe and a BCU-Xtreme for low temperature solid state NMR.

Page 55: BVO Research Summary

The Open User’s Facility

Page 56: BVO Research Summary

Solid State NMR• Varian – Chemagnetics

Infinity Plus 500 spectrometer equipped with four channels and a high power gradient amplifier for solid state diffusion studies.

• There are many probes for this system including DAS and static probes.

Page 57: BVO Research Summary

Solid State NMR

• The 500 Solid State spectrometer and work station.

• VT capabilities as well as MAS and 19F are available and used.

• Triple resonance experiments, i.e. trapdor, etc… are conducted routinely.

Page 58: BVO Research Summary

Solid State NMR

• Tecmag, rebuilt from Chemagnetics 300 wide bore.

• Multitude of probes exist.

• Most of my deuterium relaxation work was done with this system.

Page 59: BVO Research Summary

Solid State NMR

• Bruker Avance 300 wide bore

• Equipped with a double resonance 4mm MAS probe.

• Capable of spin rates of 15 kHz.

• Mostly 1H-13C CP is done here.

• Also my homonuclear dipolar suppression work.

Page 60: BVO Research Summary

Solid State NMR

• Homebuilt 400 MHz widebore system.

• Used specifically by Dr. Karl Mueller’s group.

• Has limited capabilities.

Page 61: BVO Research Summary

Electronics Work and Probe Repair

Page 62: BVO Research Summary

My Collaborative Work at PSU

Page 63: BVO Research Summary

OLD MEETS NEW

Page 64: BVO Research Summary

13C-1H HSQC of 10% PEG

• Without BIRD filter the data is unintelligible.

• Incorporating older NMR techniques with newer gradient selected pulse sequences gives us a great advantage when studying real samples.

Page 65: BVO Research Summary

15N-1H HSQCNo BIRD Flipped the BIRD

Page 66: BVO Research Summary

Stereochemical determination via 2D Homonuclear NOE Spectroscopy

Page 67: BVO Research Summary

Distance determination of RNA via 2D Excitation Sculpted NOE

10 oC with 30 msec mixing time 1 oC with 200 msec mixing time

Page 68: BVO Research Summary

Standard Small Molecule Analysis

• Adiabatic, signal enhanced HMQC

Page 69: BVO Research Summary

Ionic Liquid Diffusion NMR

Page 70: BVO Research Summary
Page 71: BVO Research Summary

Industrial NMR

Page 72: BVO Research Summary

Impurity Analysis

6-Hexadecenoic Acid

Page 73: BVO Research Summary

Small Molecule Assignments

Page 74: BVO Research Summary

Energetic Materials Analysis

Page 75: BVO Research Summary

Ubiquitin

• A small 76 amino acid protein

• About 8.5 kDa• Perfect for acceptance

test procedures in NMR• Usually doubly labeled

with 15N and 13C isotopes• HSQC, TROSY-HSCQ,

HNCO, HNCACO are all common experiments to verify structure via NMR

Page 76: BVO Research Summary

15N-1H HSQC of Ubiquitin

Page 77: BVO Research Summary

13C-1H HSQC of Ubiquitin

Page 78: BVO Research Summary

How can we deal with spectral overlap?The HNCO 3D Experiment

Page 79: BVO Research Summary

Ubiquitin HNCO (3D-NMR)

Page 80: BVO Research Summary

3D-HNCO

Page 81: BVO Research Summary
Page 82: BVO Research Summary

TROSY-HSQC 50 kDa Protein

Page 83: BVO Research Summary

Solid State NMR at PSU

Page 84: BVO Research Summary

1H SS MAS of Sucrose 4 kHz

Page 85: BVO Research Summary

Can we make that better?

Spinning at 12 kHz helps a great deal, but the resolution is still poor.

Page 86: BVO Research Summary

My Time Averaged Magic Angle Spinning Echo Sequence

Page 87: BVO Research Summary

Comparison

Page 88: BVO Research Summary

Thank You All

Very Much!