PRESENTATIONS FEATURING SMRT® SEQUENCINGFriday, June 21Session: Breakthroughs in Fungal Genomics | 2006 West

Centromeric Recombination Drives Speciation, Mating Type Transition and Karyotype Revolution in the Cryptococcus Pathogenic Species ComplexJoseph Heitman, Duke Univ. Sch. of Med. | 1:30 - 2:00 p.m.

Comparative Genomics of Early-Branching Anaerobic Fungi Reveals Novel Enzymes and Biosynthetic PotentialMichelle O'Malley, UC Santa Barbara | 2:15 - 2:45 p.m.

Widespread Adenine N6-Methylation of Active Genes in FungiStephen Mondo, JGI | 3:00 - 3:30 p.m.

Study on Evolution and Population Structure of Global Isolates of Shigella flexneri Serotype 1cPawan Parajuli, Australian Natl. Univ. | 2:45 - 3:00 p.m. | 303 South

Rapid Fire: Genomic Analysis of a Pan-Resistant Klebsiella pneumoniae Sequence Type 11 in Japan 2016Satoshi Nishida, Teikyo Univ. Sch. of Med. | 4:25 - 4:30 p.m. | AAR Track Hub (Booth 5053)

Saturday, June 22Session: Applying Long-Read Sequencing to Enable Genome Mining of Biosynthetic Clusters | AES Track Hub (Booth 4415)

Discovery and Biosynthesis of Gladiolin: A Burkholderia gladioli Antibiotic with Promising Activity against Mycobacterium tuberculosisGregory Challis, Univ. of Warwick | 12:00 - 12:45 p.m.

Linking Secondary Metabolites to Gene Clusters Through Genome Sequencing of Six Siverse Aspergillus SpeciesScott Baker, Pacific Northwest Natl. Lab. | 12:00 - 12:45 p.m.

Monday, June 24Emergence of a ST2570 Klebsiella pneumoniae Isolate Carrying mcr-1 and blaCTX-M-14 Recovered from a Community-Acquired Bloodstream Infection in ChinaHuiqiong Jia, Zhejiang Univ. | 9:45 - 10:00 a.m. | 306/307/308 South

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SMRT SEQUENCING

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VISIT US AT BOOTH #1160Metagenomics posters

POSTER TALKS – ALL POSTERS ARE ON DISPLAY IN THE EXHIBIT AND POSTER HALL

Day Time Title Author Presentation #

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Microbial Genome Assembly: Existing Challenges and the Need for Authentic Reference Genomes Dev Mittar MBP-71

Outstanding Abstract Award: Kinetoplastid Endosymbiont: Mutualist or Addiction Samriti Midha EEB-489

Comparative Genomics Highlights Extreme Genome Reduction in a Newly-Cultured Mycoavidus-Related Endofungal Bacterium Dwelling in Mortierella parvispora Yong Guo EEB-499

Pan-Genome Analysis of Lactobacillus salivarious: Investigation of Exopolysaccharide Genes Divergence and Host Adaptation Shih-Hau Chiu EEB-515

Study on Evolution and Population Structure of Global Isolates of Shigella flexneri Serotype 1c Pawan Parajuli EEB-518

A Plasmid Epidemic: Rising Plasmid-borne Mupirocin Resistance and a CRISPR-Cas Strategy for Targeted Elimination Chiemela Ohanele AAR-LB-4

Genomic Analysis of a Pan-Resistant Klebsiella pneumoniae Sequence Type 11 in Japan 2016 Satoshi Nishida AAR-549

Comprehensive Genomic Sequencing of a Clinical Collection of Bacteroides fragilis Group Isolates Spanning 52 Years Andrew Clark AAR-552

Genomic Characterization of a Novel Plasmid Carrying blaIMP-6 of Carbapenem-Resistant Klebsiella pneumoniae Isolated in Osaka, Japan Ryuichiro Abe AAR-553

Whole-Genome Sequence Analysis of Antimicrobial Resistance Genes in ATCC Global Priority Superbugs Dev Mittar AAR-568

Novel Quinolone Resistance qepA Variant in Shigella flexneri Isolated in the United States, 2016 Hattie Webb AAR-599

Genome-Wide Analysis of an Isogenic Pair of Pseudomonas aeruginosa Clinical Isolates with Differential Antimicrobial Resistance Weihua Huang AAR-610

Integration of the blaNDM-1 Carbapenemase Gene into a Novel SXT/R391 ICE in Proteus vulgaris LH Kong AAR-642

Helicase helP as Prognostic Biomarker in Patients with Pseudomonas aeruginosa Bloodstream Infection Matthias Willmann CPHM-953

Evaluation of Long-Read Sequencing for Analysis of Complex Microbiomes Cheryl Heiner AES-1171

Genomic Insights into Natural Inactivation of Shiga Toxin 2 Production in an Environmental Escherichia coli Strain Producing Shiga Toxin 1 Antares Pham AES-1195

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ST73 Escherichia coli Strain 0.1229 Amplifies Stx2 Production of O157:H7 Hillary Figler HMB-392

Whole-Genome Comparative Analysis of Mycobacterium ulcerans subsp. shinshuense, the Causative Agent of Buruli Ulcer in Japan Mitsunori Yoshida EEB-509

IS26-mediated Plasmid Convergence in Serial Isolates of NDM and OXA232-producing Klebsiella pneumoniae Brendan Corey AAR-LB-6

Genomic Analysis of Emerging Florfenicol-Resistant Campylobacter coli Isolated from Cattle in the United States. Sampa Mukherjee AAR-602

Polymyxin Resistance of Acinetobacter junii Strain CAM121 with Chimeric Genes in the pmrCAB Operon Ha Tran AAR-623

Uncovering Increased Invasiveness of the K. oxytoca Group Aline Cuénod CPHM-883

Are You Sure Your Extracted Bacterial DNA is Dead? Evaluating Broad-Spectrum Methods for Inactivating Hazard Group 2 & 3 Bacterial Pathogens Prior to Sequencing Sarah Alexander CPHM-931

Performance Evaluation of the Streck ARM-D Beta-Lactamase Kit for Molecular Detection of Plasmid-Mediated Beta-Lactamase Genes Brian Yoo CPHM-952

Novel Mechanisms of Copper Tolerance in the Marine Bacterium Alteromonas macleodii Kathleen Cusick AES-1094

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High-resolution Evaluation of Gut Microbiota Associated with Intestinal Maturation in Early Preterm Neonates *Featuring data from the Sequel II System Elias McComb HMB-LB-2

Culturomics in Action Advances in the Profiling of the Complex Healthy Female Urinary Tract Microbiota Magdalena Ksiezarek HMB-406

A More Accurate, Cheaper, Faster Microbiome Preparation Method: Application to Study the Microbiome in Cocaine Addiction Bo-Young Hong EEB-LB-4

Microbiome Profiling at the Strain Level Using rRNA Amplicons Mark Driscoll EEB-523

Whole Genome Sequencing Demonstrated Sustained Transmission of a Single Strain of New Delhi Metallo-Beta-Lactamase (NDM)-Producing Klebsiella pneumoniae in a Northern California Hospital Varvara Kozyreva AAR-561

First Report of the mcr-1 Colistin Resistance Gene in 2 Escherichia coli from Clinical Samples in the Philippines John Mark Velasco AAR-614

Emergence of a ST2570 Klebsiella pneumoniae Isolate Carrying mcr-1 and blaCTX-M-14 Recovered from a Community-Acquired Bloodstream Infection in China Huiqiong Jia AAR-629

Discovery Analysis of Transmission Source for Mycobacterium shigaense Infection, Newly Identified Localized Emerging Infectious Disease Hanako Fukano AES-1127