3.2 Carbohydrates

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    IBDP 2011 Biology Core

    Topic 3The Chemistry of Life

    1

    ACS(I) Menon 2011

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    2

    Earths Crust % (by

    mass)

    Human Body % (by

    mass)

    Oxygen 47 Hydrogen 63

    Silicon 28 Oxygen 25.5

    Aluminium 7.9 Carbon 9.5

    Iron 4.5 Nitrogen 1.4

    Calcium 3.5 Calcium 0.31

    Sodium 2.5 Phosphorus 0.22

    Most Common Elements

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    Primordial Soup Theory

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    In 1920, chemist A.I. Oparin and geneticist J.B.S Haldane firstproposed that life began ~ 3.8 billion years ago in a warmpond/ocean.

    In 1953, chemist Stanley Miller and physicist Harold Ureyconstructed an apparatus that supposedly re-created those earlyconditions.

    They mixed gases thought to be present on primitive Earth:Methane, Ammonia, Water Vapour, Hydrogen

    Electrically sparked the mixture to signify lightning.

    Resulted in the production of amino acids, building blocks ofproteins.

    4

    Primordial Soup Theory

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    Primordial Soup Theory

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    Is it time to throw out the

    Primordial Soup Theory?

    Problems with the theory:

    Early atmosphere contained gases different from those used by

    Miller/Urey Amino acids have to become proteins. How?

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    New Research Rejects 80-Year Theory of 'Primordial Soup'

    as the Origin of Life

    ScienceDaily (Feb. 3, 2010) For 80 years it has been accepted that

    early life began in a 'primordial soup' of organic molecules before evolving out

    of the oceans millions of years later.

    Today the 'soup' theory has been over turned in a pioneering paper in BioEssays

    which claims it was the Earth's chemical energy, from hydrothermal vents

    on the ocean floor, which kick-started early life.

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    Earths Crust % (by

    mass)

    Human Body % (by

    mass)

    Oxygen 47 Hydrogen 63

    Silicon 28 Oxygen 25.5

    Aluminium 7.9 Carbon 9.5

    Iron 4.5 Nitrogen 1.4

    Calcium 3.5 Calcium 0.31

    Sodium 2.5 Phosphorus 0.22

    Most Common Elements

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    IBDP 2011 Biology Core

    Topic 3: The Chemistry Of Life

    3.1 Chemical elements and water

    3.2 Carbohydrates, lipids and proteins

    3.3 DNA structure 3.4 DNA replication

    3.5 Transcription and translation

    3.6 Enzymes 3.7 Cell respiration

    3.8 Photosynthesis

    9

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    Earths Crust % (by

    mass)

    Human Body % (by

    mass)

    Oxygen 47 Hydrogen 63

    Silicon 28 Oxygen 25.5

    Aluminium 7.9 Carbon 9.5

    Iron 4.5 Nitrogen 1.4

    Calcium 3.5 Calcium 0.31

    Sodium 2.5 Phosphorus 0.22

    Most Common Elements

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    3.2.1 Distinguish between

    organic and inorganic compounds

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    Organic compounds

    Compounds derived from living things

    Carbon is uncommon in earths crust but most abundant elementby dry weight in living things

    Compounds of carbon; often also contains hydrogen

    Exceptions CO2, hydrogen carbonates (CO2 dissolved in water),mineral salts eg calcium carbonate are NOT organic

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    Carbon compounds

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    cysteine

    Carbon forms 4 strong covalent bonds

    Can bond with each other to form extended chains straight orbranched chains, or rings

    Can bond with other atoms, such as O2, H2, N2 and S (sulphur)

    Carbon compounds may be unsaturated ie. contain double or triplebonds

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    Monomer Polymer Supra Molecular

    Structure

    Carbon compounds: Macromolecules

    Monosaccharides Polysaccharides Cellulose cell wall

    Amino acids Polypeptides Protein ComplexNucleotides Nucleic acid Chromosome

    Fatty acids Fats Cell membranes

    Can form macromolecules (polymers) fromsmaller building blocks called monomers

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    Polysaccharides :polymers of monosaccharides

    Polypeptides:polymers of amino acids

    Carbon compounds: Macromolecules

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    Carbon compounds: Macromolecules

    Nucleic acids :

    polymers of nucleotides

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    Theory diversity of organic compounds madepossible the diversity of life

    Carbon compounds

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    IBDP 2011 Biology Core

    Topic 3: The Chemistry Of Life

    3.1 Chemical elements and water

    3.2 Carbohydrates, lipids and proteins

    3.3 DNA structure 3.4 DNA replication

    3.5 Transcription and translation

    3.6 Enzymes 3.7 Cell respiration

    3.8 Photosynthesis

    17

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    1. Identify glucose and ribose from diagrams showingtheir structure.

    2. List three examples each of monosaccharides,

    disaccharides and polysaccharides.

    3. State one function of glucose, lactose and glycogen inanimals, and of fructose, sucrose and cellulose inplants.

    4. Outline the role of condensation and hydrolysis in therelationships between monosaccharides, disaccharidesand polysaccharides.

    18

    3.2 Carbohydrates: Learning Objectives

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    3.2.2. List three examples each ofmonosaccharides, disaccharides andpolysaccharides.

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    Carbohydrates

    General formula: Cx(H2O)y

    H:O generally 2:1

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    Monosaccharide (singe sugars)

    (eg. glucose, galactose, fructose)

    Disaccharide (double sugars)

    (eg. maltose, lactose and sucrose)

    Polysaccharide (Complex sugars)

    (eg. starch, glycogen, cellulose)

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    Monosaccharides

    Cannot be broken down into smaller units

    General formula: Cx(H2O)y where x=y

    Have a maximum of 6-carbon atoms, ie. x=y=6

    eg. Glucose, fructose C6H1206 Sweet & water soluble molecules

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    3-carbon : triose sugar

    4-carbon : tetrose sugar

    5-carbon : pentose sugar

    6-carbon : hexose sugar

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    Triose: eg. Glyceraldehyde Pentose: eg. Ribose Hexose: eg. Glucose

    When C in carbonyl group (C=O) is at the very end of the chainit becomes an aldehyde group (H- C=O) and the monosaccharide is

    called an aldose.eg. Aldotriose, aldopentose, aldohexose

    I

    C

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    Hexose: eg. Fructose (Ketohexose)

    When C in carbonyl group (C=O) is at the second position of the

    chain and it becomes a ketone group (C=O) and themonosaccharide is called a ketose. I

    C

    CI

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    In general, alcohols can attack the C=O group in

    sugars to form hemiacetals

    Since sugars have OH groups, they can formhemiacetals by an intramolecular reaction, formingclosed rings

    Hexoses and pentoses are able to form closed rings

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    Cyclic Structures: Anomers

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    Under physiological conditions, glucose exists in a cyclic hemiacetal form where the C-5hydroxyl reacts with the C-1 aldehyde group

    The 2 isomers that are formed are called anomers since they only differ in the location of theOH on the acetal carbon, C-1. ie. and forms of D-glucose are anomers of D-glucose

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    Animation: Cyclization of Glucose into Anomers

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    3.2.1 Identify glucose from diagramsshowing its structure

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    Note: Ring consists of 5 carbon atomsand an oxygen atom

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    Structure of Glucose Molecular formula: C6H12O6

    An aldohexose

    Common names: Dextrose, blood sugar

    Structure of the molecule cannot be determined frommolecular formula (due to existence of isomers, anomers)

    Each carbon arranges it four bonds into a tetrahedon, sothe molecule is not flat

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    3.2.3 State one function of glucose & lactose in animals,and of fructose & sucrose in plants.

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    Some Functions of Glucose

    Especially important in energy production andformation of macromolecules in cells

    During photosynthesis, light energy is trapped and

    stored as chemical energy in the form of glucose

    All cells use glucose as substrate in respiration,producing chemical energy ATP

    Building block for many larger molecules eg.Monomer for glycogen, starch, cellulose

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    Glucose & Diabetes

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    Glucose & Diabetes

    Video: Type 1 and Type 2 Diabetes

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    Reducing Sugars

    + Cu2O (red-orange)

    The aldehyde groups of aldoses and ketone group of fructoseare oxidized by Benedicts reagent, an alkaline copper(II)

    solution

    The clear blue color of the reagent fades as it is replaced by ared-orange precipitate when Cu2+ is reduced to Cu+

    Test can measure glucose in urine

    All monosaccharides and disaccharides except sucrose arereducing sugars

    C

    C

    O H

    CH2OH

    OHH

    C

    C

    O O

    CH2OH

    OHH+2 Cu2+

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    Other Monosaccharides

    Fructose (ketohexose)

    Galactose (aldohexose)

    Ribose and Deoxyribose (aldopentoses)

    - components of nucleic acids RNA, DNA

    respectively

    Trioses (early products of photosynthesis)

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    Fructose

    Fructose is also called Levulose

    Fruit sugar

    Found in large amounts in Honey

    Corn syrup

    Fruits

    The sweetest of all sugars

    Ketohexose

    An intermediate of glucosemetabolism duringrespiration

    D-fructose

    CH2OH

    C

    C

    O

    OHC OHHC

    H

    OHCH

    2OH

    H

    1

    2

    3

    4

    5

    6

    OCH

    2OH

    CH2OH

    HOHH

    OH

    O

    CH2OH

    CH2OH

    HOHH

    OH

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    Relative sweetness of sugars and sweeteners

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    Galactose

    Galactose is the principal sugar found inmammalian milk

    Aldohexose

    -D-galactosamine is a component of the blood

    group antigens

    -D-galactose

    CHOC

    C

    OH

    OHCOH HC

    H

    OH

    CH2

    OH

    H

    H

    1

    2

    3

    4

    5

    6

    OCH

    2OH

    H

    H

    OH

    H

    OH

    OH

    HOH

    HOH

    H

    NH2

    NH2

    -D-galactosamine

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    Aldopentose

    Exists mainly in the cyclic form

    Component of ribonucleic acid (RNA).

    Ribose

    1

    2

    5

    4

    3

    1

    23

    4

    5

    -D ribose

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    Aldopentose

    Exists mainly in the cyclic form

    Component of deoxyribonucleic acid (DNA).

    Deoxyribose

    1

    2

    5

    4

    3

    1

    23

    4

    5

    H

    H

    -D deoxyribose

    f d

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    Structure of DNA and RNA

    DNA :

    Polymer of deoxyribonucleotides

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    Disaccharides

    Maltose: glucose + glucose

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    Sucrose: glucose + fructose

    Lactose: glucose + galactose

    Consists of 2 molecules of monosaccharides joined together

    General formula Cx(H2O)y

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    3.2.4 Outline the role of condensation and hydrolysis in

    the relationships between monosaccharides and

    disaccharides.

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    Formation of Disaccharides

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    2monosaccharides disaccharide

    Condensation

    Hydrolysis

    O HH O O HH O+

    OH O O H

    H2OH2O

    Glycosidic bond

    Definition: A condensation reaction is a chemical reaction in which two simple moleculesare joined together to form a larger molecule with the removal of one molecule of water.

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    1

    234

    5

    6

    1

    23

    4

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    Maltose is formed by joining

    -D-glucose to

    -D-glucose to give an 1,4-glycoside

    Also known as malt sugar

    Formed as an intermediate of starch hydrolysis

    Source: Germinating grains

    Formation of Maltose

    D- D-

    Lactose

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    Lactose

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    Lactose is formed by joining -D-galactose to -D-glucose to give a-1,4-glycoside

    Also known as milk sugar Principle source of energy in the diet of young mammals

    Must be hydrolyzed to glucose and galactose for use as an energysource

    Lactose intolerance results from lack oflactase to hydrolyze theglycosidic link of lactose

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    Lactose Intolerance

    Inability to digest lactose Caused by a deficiency of the enzyme lactase, produced by the cellslining the small intestine.

    Primary lactase deficiency develops over time and begins after

    about age 2 when the body begins to produce less lactase. Mostchildren who have lactase deficiency do not experience symptoms oflactose intolerance until late adolescence or adulthood.

    A possible genetic link to primary lactase deficiency. Some people

    inherit a gene from their parents that makes it likely they will developprimary lactase deficiency.

    Some racial/ethnic populations are more affected than others

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    Global Distribution of Lactose Intolerance

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    S

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    Sucrose

    Sucrose is formed by linking -D-glucose with -D-

    fructose to give a 1,2 glycosidic linkage

    Sucrose if NOT a reducing sugar because the aldehydeand ketone groups in its component monosaccharideshave been lost in the formation of the glycosidic bond

    50

    D- D-

    1

    2

    3 4

    5

    6

    1

    23

    4

    5

    6

    Sucrose

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    Sucrose

    Plants can synthesize sucrose. Animals cannot.

    Sucrose is Water soluble Easily transported in plant circulatory system

    Sucrose called: Table sugar Cane sugar

    Beet sugar

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    1. Identify glucose and ribose from diagrams showingtheir structure.

    2. List three examples each of monosaccharides,

    disaccharides and polysaccharides.

    3. State one function of glucose & lactose in animals, andof fructose & sucrose in plants.

    4. Outline the role of condensation and hydrolysis in therelationships between monosaccharides &disaccharides.

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    3.2 Carbohydrates: What we have learnt

    today

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    Test yourself!

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    3. What is the major difference between lactose intolerance

    and galactosemia?

    2. What is the difference between Type 1 and Type 2diabetes?

    1. Why does cyclization of D-glucose give 2 isomerscalled anomers, - and - D- glucose?

    l h d

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    Polysaccharides

    Polymer of monosaccharides

    Built by many monosaccharide units condensedtogether, all linked by glycosidic bonds

    Condensing process = polymerisation

    Can be divided into 2 groups

    A. Storage polysaccharides1. Starch

    2. GlycogenB. Structural polysaccharides

    1. Cellulose

    2. Chitin54

    Starch

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    Starch

    Energy storage in plants

    A mixture of amylose & amylopectin

    Amylose is a linear polymer of hundreds of glucoseunits, with all the residues linked together by (1-4)bonds

    Amylopectin is a highly branched chain polymer ofseveral thousand glucose units, with (1-6) linkagescreating branches along the chain of (1-4) linkages

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    Before starch can enter (or leave) cells it must be

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    Before starch can enter (or leave) cells, it must bedigested

    The hydrolysis of starch is done by amylases.

    With the aid of an amylase, water molecules enter at the(1-4) linkages, breaking the chain & eventually producinga mixture of glucose & maltose

    A debranching enzyme is needed to break the (1-6)bonds of amylopectin

    Glycogen

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    Glycogen

    Energy storage polysaccharides in animals

    Also made by fungi

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    l l b l f l

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    Animals store excess glucose by polymerizing it to form glycogen

    The structure of glycogen is similar to that of amylopectin, although

    the branches in glycogen tend to be shorter & more frequent

    Glycogen is broken back down into glucose when energy is needed (aprocess called glycogenolysis)

    Glucose units are released by the enzyme glycogen phosphorylase toproduce glucose-1-phosphate, which is then used to generate energy

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    St h & l d t b t

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    Starch & glycogen good storage substances.Why?

    Hydroxyl (OH) groups project into the interior of helix

    1. Insoluble in water- Does not affect water potential of cells- Large amounts can be stored without gain of water

    2. Can be compacted- Branched structure allows for extensive coiling & entangling- > carbohydrate stored per unit volume

    3. Easily hydrolysed- No cross-linkages between chains- Easily broken down into monosaccharides

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    STARCH

    Cellulose

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    Cellulose

    Structural polysaccharides in plants

    Like starch, cellulose is a polysaccharide made fromglucose monomers

    However, cellulose differs profoundly from starch in

    its properties

    The glucose units are linked by (1-4) glycosidiclinkages, which cannot be digested by mammalian

    enzymes

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    Because the glycosidic bonds are (1-4) the rings of

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    Because the glycosidic bonds are (1 4), the rings ofglucose are arranged in a flip-flop manner

    This produces a long, straight, rigid molecule

    There are no branches in cellulose as there are in

    starch

    The absence of side chain allows these linear

    molecules to lie close together Because of the many OH groups, as well as the

    oxygen atom in the ring, there are many

    opportunities for hydrogen bonds to form between

    adjacent chains

    The result is a series of stiff, elongated fibrils the

    perfect material for building the cell walls of plants

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    Parallelarrangement of

    unbranchedcellulose molecules

    Functions of Cellulose

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    Adds strength to cell walls- macrofibrils arranged inlayers- 90o orientation- glue-like matrix (pectin)

    Prevents cells from bursting

    Helps determine shape ofcells Enable development of

    turgidity

    Has gaps between chains &layers- channels for water- can be filled with lignin for

    extra tensile strength (eg.xylem vessels)Spaces in cellulose 65

    Since both starch and cellulose are made of glucose

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    66

    Since both starch and cellulose are made of glucose

    units joined together, why then only starch can bedigested in our bodies but not cellulose?

    STARCH

    CELLULOSE

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    1. What is the difference between acondensation and a hydrolysisreaction? Give an example of each.

    2. What are the key features of biological

    macromolecules?

    3. What is the significance of hydrogen

    bonds in fibres of cellulose?

    Test Yourself!

    3.2 Carbohydrates:Learning objectives

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    1. Distinguish between organic and inorganiccompounds2. Identify glucose and ribose from diagrams showing

    their structure

    3. List three examples each of monosaccharides,disaccharides and polysaccharides4. State one function of glucose, lactose and glycogen in

    animals, and of fructose, sucrose and cellulose inplants

    5. Outline the role of condensation and hydrolysis in therelationships between monosaccharides, disaccharidesand polysaccharides

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    3.2 Carbohydrates:Learning objectives

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    Biology Clegg

    Biology Concepts and Connections Campbell

    Advanced Biology Principles andApplications Clegg with Mackean

    Biological Science Green Stout Taylor

    69

    Further Reading

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    THE END!