Lecture 1 – Introduction and Importance of Systematics Mayr - “the theory and practice of classifying organisms”. -Taxonomy – includes species descriptions,
Family of HMMs
Simultaneous estimation of Trees and Alignments, or Complexity and The Tree of Life
Three approaches to large-scale phylogeny estimation: SATé, DACTAL, and SEPP
From Gene Trees to Species Trees
Phylogeny Estimation: Why It Is "Hard", and How to Design Methods with Good Performance
SEPP and TIPP for metagenomic analysis
The history of the Indo-Europeans Tandy Warnow The University of Texas at Austin.
IPAM Workshop on Multiple Sequence Alignment Tandy Warnow The University of Illinois at Urbana-Champaign.
Phylogeny Estimation: Why It Is "Hard", and How to Design Methods with Good Performance Tandy Warnow Department of Computer Sciences University of Texas.
Complexity and The Tree of Life Tandy Warnow The University of Texas at Austin.
