Omics Modeling 10/18/2011. Classes reviewed until last meeting – Person – BiologicEntity – Subject – SubjectIdentifier – Performer – ExperimentalStudy.
Oscillation patterns in biological networks Simone Pigolotti (NBI, Copenhagen) 30/5/2008 In collaboration with: M.H. Jensen, S. Krishna, K. Sneppen (NBI)
Part 3 of RNA-seq for DE analysis: the mapping process
Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome Peng et al. Nature Biotechnology (2012) doi:10.1038/nbt.2122.
Multiple alignment: heuristics. Consider aligning the following 4 protein sequences S1 = AQPILLLV S2 = ALRLL S3 = AKILLL S4 = CPPVLILV Next consider the.
Www..uni-rostock.de Ulf Schmitz, Sequence Analysis I 1 Bioinformatics Sequence Analysis I Ulf Schmitz [email protected] Bioinformatics.
Institute for Quantitative & Computational Biosciences Workshop4: NGS- study design and short read mapping.
1 “CSE4052” “INTRODUCTION TO BIOINFORMATICS” “BAHÇEŞEHİR UNIVERSITY” “SPRING 2005” “Dr. N AYDIN” Lecture 3 Pairwise Sequence Alignment Doç. Dr. Nizamettin.
CECS 694-02 Introduction to Bioinformatics University of Louisville Spring 2003 Dr. Eric Rouchka Lecture 2: Pairwise Sequence Alignment Eric C. Rouchka,
Geometric Crossover for Biological Sequences Alberto Moraglio, Riccardo Poli & Rolv Seehuus EuroGP 2006.
Polymorphism discovery in next- generation re-sequencing data Gabor T. Marth Boston College Biology Department Illumina workshop, Washington, DC November.
Phylogenetic reconstruction. Types of data used in phylogenetic inference: Distance-based methods: Transform the sequence data into pairwise distances,
