. Maximum Likelihood (ML) Parameter Estimation with applications to inferring phylogenetic trees Comput. Genomics, lecture 7a Presentation partially taken.
NVIDIA Research CUDA Specialized Libraries and Tools CIS 665 – GPU Programming.
Probabilistic Approaches to Phylogeny Wouter Van Gool & Thomas Jellema.
Combinatorics & the Coalescent (26.2.02) Tree Counting & Tree Properties. Basic Combinatorics. Allele distribution. Polya Urns + Stirling Numbers. Number.
Evolutionary tree reconstruction (Chapter 10)
Rec-I-DCM3: A Fast Algorithmic Technique for Reconstructing Large Evolutionary Trees Usman Roshan Department of Computer Science New Jersey Institute of.
Order Statistics. Order statistics Given an input of n values and an integer i, we wish to find the i’th largest value. There are i-1 elements smaller.
Presentation partially taken from Dan Geiger, modified by Benny Chor.
CS 394C: Computational Biology Algorithms
On the Scalability of Computing Triplet and Quartet Distances Morten Kragelund Holt Jens Johansen Gerth Stølting Brodal 1 Aarhus University.
Computer Algorithms Lecture 9 Heapsort Ch. 6, App. B.5 Some of these slides are courtesy of D. Plaisted et al, UNC and M. Nicolescu, UNR.
Simultaneous estimation of Trees and Alignments, or Complexity and The Tree of Life