CS532.doc
SLIQ
New techniques that “boost” methods for large-scale multiple sequence alignment and phylogenetic estimation Tandy Warnow Department of Computer Science.
ZORRO : A masking program for incorporating Alignment Accuracy in Phylogenetic Inference Sourav Chatterji Martin Wu.
CS 394C Algorithms for Computational Biology Tandy Warnow Spring 2012.
SLIQ and SPRINT for disk resident data
Combining with phylogeny