TRITOn Translational Informatics Research Platform
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Transcript of TRITOn Translational Informatics Research Platform
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TRITOnTranslationalInformaticsResearchPlatform
William Stephens
The Ohio State University
February 2011
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What is TRITOn?
The Translational Information Research Information Omnibus (TRITOn) is an integrative translational research information management platform. It is the product of an NCI funded re-engineering effort of the CSIM software used by the Chronic Lymphocytic Leukemia Research Consortium (CLL-CRC).
CLL-CRC
•Translational research targeting Chronic Lymphocytic Leukemia (CLL)
•Established in 1999
•Cohort of over 5,000 patients
•Comprehensive phenotypic and bio-molecular data sets, as well as bio-specimens
•8 participating sites
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Goals
Goals of the project:
•Modernize the technologies underlying the CRC’s clinical and translational research information management systems, including grid technologies and a modern web application framework.•Provide CRC participants with access to tools capable of enabling an increase in research productivity:
- Data exchange
- Bio-specimen management
- Adverse event detection
- Protocol-driven decision support
- Integrative query and data aggregation
•Provide community access to resulting technologies
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Platform Overview
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Clinical Trials ManagementClinical Trials Management
Bio-specimenManagementBio-specimenManagement
Basic ScienceData CaptureBasic ScienceData Capture
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Application Architecture – 5/2012
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Grid Service Information
• Grid Service Specifics (Directory, Protocol and Participant)
• caGrid 1.3.0.2
• caCORE 4.2
• Writable API
• Data Services with analytical operations
• Local API – no caCORE web applications needed
• caTissue
• Custom caTissue data service using version 1.1.1 domain model
• Uses standard grid security to authorize grid user access
• Grid users can query using CSM configurations specific to their role.
• caAERS
• caAERS service to allow querying of adverse event codes
• Support for electronic adverse event reporting6
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Web Application Information
• Java-based User Interface
• Uses Google Web Toolkit version 2.1 (latest release)
• Uses MVP (model view presentation) architecture
• Purposely uses a clean Google-like interface
• Integrates with caGrid• Dorian Service
• user registration and authentication
• Directory Service• Institution, Site, User and Participant information
• Protocol Service• Creation and management of clinical protocols
• Participant Service• Management of Participant enrollment and CRF data collection
• caTissue Service• Tissue Sample management
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UI Appearance
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