TOOLS, REAGENTS, ASSAYS SUMMARY Stable cell lines … · 2017-07-10 · TM reagents, assays and...
Transcript of TOOLS, REAGENTS, ASSAYS SUMMARY Stable cell lines … · 2017-07-10 · TM reagents, assays and...
● We define Live Content Imaging as the acquisition, analysis and quantification of images (phase and fluorescence) from living cells that remain unperturbed by the detection method, allowing for repeated measures over long periods of time (days to weeks)
● We differentiate Live Content from High Content Imaging which typically measures assay end points using fixed cells, or employs conditions (e.g. Ab labelling) under which cells are viable for only short periods of time (minutes to hours). Live Content Imaging offers clear advantages for measuring long term biological processes, providing full temporal resolution of the events of interest from viable healthy cells. The images and time-lapse movies are information rich and yield valuable confirmation of the experimental outcomes.
● Here we describe a novel suite of tools – reader technology, cellular reagents, assay protocols, software modules – that together enable true live content imaging assays. The building blocks of these assays are (1) the IncuCyte Zoom live cell imaging device (2) novel, highly validated targeted GFP/RFP lentiviral and stable cell lines (3) sophisticated algorithms for fluorescent object analysis and for quantifying phase structures. Using these tools we have configured micro-titre plate-based kinetic assays for apoptosis, cell proliferation, cytotoxicity, angiogenesis, cell migration, cell invasion and neurite outgrowth. Simultaneous phase contrast and single colour fluorescence assays as well as multiplexed two colour (red/green) and phase reads are exemplified in both homogeneous cell systems (e.g. 1 cell type) as well as co-culture (2 cell types) models.
● The introduction of targeted GFP and RFP cellular reagents suitable for long term live cell imaging along with the 2 colour IncuCyte Zoom system, provide a powerful integrated solution for fully kinetic, multiplexed live cell assays. We foresee particular utility in co- and multi-culture cell systems such as in studies on the tumour microenvironment.
Essen BioScience, Ann Arbor, Michigan, 48108 USA & Welwyn Garden City, AL7 3AX UK
Poster contacts: D.J. Trezise ([email protected]) & T.J. Dale ([email protected])
SUMMARY
www.essenbioscience.com
live content imaging enabled
Multiplexed, live content cellular imaging enabled: Cell Player
TM reagents, assays and IncuCyte Zoom
TM
enabled
TOOLS, REAGENTS, ASSAYS
Targeted GFP & RFP lentiviruses
3rd generation HIV-based, VSV-G pseudotyped lentiviral particles encoding cytolasmic (CytoLight) or nuclear restricted (NucLight) GFP or RFP, or a combination of the two (DuoLight).
Expression driven off either an EF-1a or CMV promotor with antibiotic resistance cassette for stable cell line generation.
Validated as non-perturbing to cell health across a range of MOIs.
Nuclear / Cytoplasmic GFP / RFP stable cell lines
Created by transduction of the host cell with the targeted lentiviruses (above).
Typically >95% of cells express the fluorescent protein. Validated as comparable to host cell lines (morphology, growth rates, migration rates).
IncuCyte Zoom Live Cell Imaging Device resides within a
standard cell culture incubator.
Cell culture consumables (e.g. micro-titre plates, T-flasks, petri dishes) are placed within for in situ assays.
Gathers time lapse images from cells – high definition phase contrast, green and red fluorescence.
User Interchangeable objectives – 4x, 10x, 20x.
Up to 6 x 384-well plates simultaneously.
Simple to use but highly advanced phase and fluorescent image processing software tools.
HT-1080 NucLight-Red A549 NucLight-Green
VALIDATION OF TARGETTED GFP/RFP
LENTIVIRAL REAGENTS & CELL LINES
PHASE/2-COLOUR ASSAY APPLICATIONS
Co-Culture Kinetic Proliferation
Duplex Cell Proliferation & Apoptosis/Cytotoxicity
2-COLOUR ADVANCED BIOLOGY MODELS
NeuroTrack: Kinetic Neurite Outgrowth
Assay Type Measurement Format
Proliferation Number of nuclei (count) 96, 384w
ApoptosisCaspase 3/7 positive nuclei
(count)96, 384w
CytotoxicityYoYo1 positive nuclei
(count)96, 384w
Migration Scratch wound migration 96w
Invasion
Scratch wound through
substrate (e.g. Matrigel,
Collagen-1)
96w
Angiogenesis Vascular Tube Formation 96w
Neurotrack Neurite Outgrowth 96w
Cell Player Assays
GFP-labelled
HUVECs/ECFCs
Phase (& Fluoresence)
Markers
Nuclear-restricted
GFP/RFP: NucLight
Red/NucLight Green
Bifunctional DEVD/DNA
binding fluorescent
substrate
YoYo-1 cell intact cell
impermeant DNA
Wound confluence (Phase)
Wound confluence (Phase)
>20, including
immortalised and
primary cells
>20, including
immortalised and
primary cells
>20, including
immortalised and
primary cells
>20, including
immortalised and
primary cells
HUVECs & human
dermal fibroblasts
(Prime Kit), Adipocyte
Derived Stem Cells &
Rat hippocampal
neurones, neuronal
IPSCs, neuroblastoma
(Neuro-2a)
Cell types
>20, including
immortalised and
primary cells
3000 nM
1000 nM
333 nM
111 nM
37 nM
12 nM
4 nM
untreated
Figure 1. Lentiviral infection of immortalised and primary cells. Transduction efficiency of NucLight Green at different multiplicities of infection (MOI) ± polybrene in A549 (A) and HUVEC (B) cells following 24-48h transduction. Image of A549 cells expressing the NucLight Green (C). Note the homogeneous nuclear restricted GFP label and healthy appearance of the cells.
96- & 384-WELL KINETIC PROLIFERATION
ASSAYS BASED ON CELL COUNT
Cat# 4490 HeLa NucLight Green
Cat# 4486 HT-1080 NucLight Green
Cat# 4492 A549 NucLight Green
Cat# 4489 HeLa NucLight Red
Cat# 4487 MDA-MB-231 NucLight Red
Cat# 4485 HT-1080 NucLight Red
Cat# 4491 A549 NucLight Red
MOI=
0
MOI=
0.8
MOI=
2.4
MOI=
7.20
20
40
60
80
100- polybrene
+ polybrene (8 g/ml)
% T
ran
sdu
ced
at
48
h
MOI=
0
MOI=
1
MOI=
3
MOI=
6
MOI=
9
MOI=
120
20
40
60
80
100
% T
ran
sdu
ced
at
72
h
A A549 cells B HUVEC C
0 2000 4000 60000
2000
4000
6000
Seeding density (cells/well)
Ob
jec
t c
ou
nt
(1/m
m2)
0 10 20 30 400
250
500
750
1000
Time (h)
Ob
jec
t c
ou
nt
(1/m
m2)
B cell number vs time C log cell number vs time A cell number vs seeding density
Figure 3. (A) Correlation between cell seeding density and nuclear count (HT1080 NucLight-Green stable cell line). (B) Time-course of cell proliferation at different initial cell densities. (C) Log10 of the nuclear count time-course, illustrating exponential cell growth. (D) Kinetic data were fitted to y = y0. eKt to yield comparative growth rate constants (K values) and doubling times.
800
1600
3200
4800
Cells/well
0 10 20 30 4010
100
1000
Time (h)
Ob
jec
t c
ou
nt
(1/m
m2)
800
1600
3200 4800
Cells/well
R2=0.99 Slope 1.0
Mean data from duplicate testing
TAME
-8 -6 -40
1000
2000
3000
4000PD98059
-8 -6 -4
Compound 401
-8 -6 -4
10-DEBC
-8 -6 -4
FAK inhibitor 14
-8 -6 -4
FPA124
-9 -7 -5
KU0063794
-10 -8 -60
1000
2000
3000
4000Cycloheximide
-10 -8 -6
Chrysin
-7 -5 -3
Mitomysin C
-8 -6 -4
Staurosporin
-10 -8 -6
RITA
-8 -6 -4
Doxorubicin
-8 -6 -40
1000
2000
3000
4000Cisplatin
-8 -6 -4
Camptothecin
-8 -6 -4
PAC1
-11 -9 -7
Figure 4: (A) 96-well plate view of kinetic cell proliferation assay in HT1080-NucLight Green cells in the presence of different concentrations of cyclohexamide (CHA). (B) Overlaid timecourses. (C) 384-well assay plate view and IC50 curves.
Cat# 4488 MDA-MB-231 NucLight Green
Figure 2. Panel of NucLight Green and NucLight Red stable cell lines in different host cell backgrounds. Note (1) the discrete nuclear localisation of the fluorescent protein (2) the homogeneous expression of almost all cells in the field of view and (3) the healthy appearance of the cells. In cell proliferation & migration experiments no differences were observed between the properties of the parental and transfected cells (data not shown).
A B
Seeding density
(Cells mm-2)Y0 K Doubling Time (h) R² Y0 K Doubling Time (h) R²
4.8 152 0.045 15.5 1.00 294 0.021 33.6 0.98
3.2 119 0.045 15.5 1.00 222 0.023 30.8 0.99
1.6 63 0.037 18.6 1.00 93 0.025 27.2 1.00
0.8 32 0.032 21.7 1.00 42 0.024 28.5 1.00
HT1080 HelaD
Angiogenesis: Endothelial and stromal cell co-cultures
Cell invasion: HT1080 and MCF-7 cells
Figure 5: (A) Co-culture of HT1080-NucLight-Red and A549 NucLight-Green at 12 h post-seeding. (B) IncuCyte software image mask independently identifying red and green nuclei. (C) Time-course of cell count.
C
Max
ob
ject
co
un
t (1
/mm
2 )
Log [compound] (M)
HeLa NucLight-Red Control (Untreated)
Staurosporin, 300 nM
Figure 6: Cell proliferation and apoptosis. (A & B) Representative images of HeLa NucLight-Red cells following control or 300 nM SSP treatment. Time-courses for nuclear count (C) and caspase 3/7 (D). (E) AUC XC50 curves for caspase 3/7 and nuclear count.
0 10 20 30 40 50
0
200
400
600
1000 nM
333 nM
111 nM
37 nM
12 nM
4.1 nM
1.4 nM
Control
Time (h)
Ob
jec
t C
ou
nt
(1/m
m2)
0 10 20 30 40 50
0
200
400
600
1000 nM
333 nM
111 nM
37 nM
12 nM
4.1 nM
1.4 nM
Control
Time (h)
Ob
jec
t C
ou
nt
(1/m
m2)
A
B
C
D
E
-9 -8 -7 -60
5
10
15
10
15
20Nuclear Objects
Caspase Objects
ProliferationIC50 96 nM
ApoptosisEC50 208 nM
[Staurosporine] M
Ca
sp
as
e 3
/7 (
AU
C x
10
3)
Nu
cle
ar C
ou
nt (A
UC
x1
03)
B C
HT1080 NucLight Red
Figure 7: Cell proliferation and cytotoxicity. (A & B) Representative images of HT1080 NucLight-Red cells following control or 300 nM CMP treatment. Time-courses for nuclear count (C) and YOYO-1 (D). (E) AUC XC50 curves for YOYO-1 and nuclear count.
A
B
C
D
E Control (Untreated)
Camptothecin, 444 nM
0 10 20 30 40 500
20
40
60
804000 nM
1333 nM
444 nM
148 nM
49 nM
16 nM
5 nM
Control
Time (h)
Ob
jec
t C
ou
nt
(1/m
m2)
Nuclear count (proliferation)
Caspase 3/7 (apoptosis)
YOYO-1 (cytotoxicity)
Nuclear count (proliferation)
-9 -8 -7 -6 -50
5
10
15
20
0.0
0.5
1.0
1.5
2.0YOYO-1 Count
Nuclear Count
Proliferation
IC50 17 nM
Cytotoxicity
EC50 197 nM
Log [camptothecin] M
Nu
cle
ar
Co
un
t (A
UC
x1
03)
YO
YO
-1 (A
UC
x 1
03)
A
Ob
jec
t c
ou
nt
(1/m
m2)
Time (h)
Time (h)
Ob
jec
t c
ou
nt
(1/m
m2)
Figure 9: Use of the DuoLight construct for combined nuclear (Red) and cytoplasmic (Green) labelling. This approach allows the use of quantitative algorithms to measure the vascular tube network and HUVEC cell number simultaneously.
Figure 10: Co-culture cell invasion assay in matrigel. Representative images of HT1080 CytoLight-Red and MCF-7 CytoLight-Green cells. Note the invasion of the HT1080 cells, but not the MCF-7 cells into the wounded area.
Figure 8: (A) Representative image of Neuro-2A cells. (B) Neuro-2A cells with the quantification mask applied, identifying neurite outgrowth. (C) Time-course of neurite outgrowth and attenuation by the PKC inhibitor Ro-31-8220.
A B C
0 50 100
0.00
0.05
0.10
0.15
0.20
Control
10 M
1 M
0.1 M
0.01 M
0.001 M
Time (h)
ne
uri
te le
ng
th/o
bje
ct
DuoLight StemKit (ECFCs, ADSCs) PrimeKit (HUVEC, NHDF)
Catalog Name Type Localization Promoter Selection
4475 NucLight Green Lentivirus Nucleus EF-1a Puromycin
4476 NucLight Red Lentivirus Nucleus EF-1a Puromycin
4477 NucLight Green Lentivirus Nucleus EF-1a Bleomycin
4478 NucLight Red Lentivirus Nucleus EF-1a Bleomycin
4481 CytoLight Green Lentivirus Cytoplasm EF-1a Puromycin
4482 CytoLight Red Lentivirus Cytoplasm EF-1a Puromycin
4483 CytoLight Green Lentivirus Cytoplasm EF-1a Bleomycin
4484 CytoLight Red Lentivirus Cytoplasm EF-1a Bleomycin
4413 CytoLight Green Lentivirus Cytoplasm CMV None
TBD DuoLight (Red/Green) Lentivirus Nuc + Cyto CMV Puromycin
Lentiviral targeted GFP & RPFs
Catalog No. Cell Type
4485 HT-1080
4486 HT-1080
4487 MDA-MB-231
4488 MDA-MB-231
4489 HeLa
4490 HeLa
4491 A549
4492 A549
4506 HUVEC (Primary cells)
4511 Neuro-2a
4512 Neuro-2a
TBD HUVEC-DuoLight
NucLight Green Puromycin
NucLight Red Puromycin
Stable cell lines expressing targeted GFP & RPFs
Fluorescent Marker Selection
NucLight Red Puromycin
NucLight Red Puromycin
NucLight Green Puromycin
NucLight Red Puromycin
NucLight Green Puromycin
NucLight Red Puromycin
NucLight Green Puromycin
NucLight Green None
NucLight Green Puromycin
NucLight Red/CytoLight Green None
0 10 20 30 40 500
200
400
600
800
10004000 nM
1333 nM
444 nM
148 nM
49 nM
16 nM
5 nM
Control
Time (h)
Ob
jec
t C
ou
nt
(1/m
m2)
The data contained in this poster represents work designed and conducted by the entire Essen BioScience R&D team
Nuclear Objects
YOYO-1 Objects