The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely...

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The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely corre Nit-1 Nit-1 Nit-1 Nit-1 active nitrate reductase nitrate reductase sulfite oxidase xanthine dehydrogenase aldehyde oxidase apo N R apo SO apo XDH apo A O dissociated M oco

Transcript of The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely...

Page 1: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

The Molybdenum Cofactor: Moco

What early experiments indicated:

… but it wasn’t entirely correct.

Nit-1 Nit-1 Nit-1 Nit-1

active nitrate reductase

nitrate reductase

sulfite oxidase

xanthine dehydrogenase

aldehyde oxidase

apo NRapo SO apo XDH apo AO

dissociatedMoco

Page 2: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

O

Mo OS

SX

O

Mo SS

SX

O

Mo OHS

SX

O

MoS

S

X

S

S

(a) (b) (c) (d) (e)

O

MoS

S

O

S

S

ASP

Now we know that there is not just one Moco, but a family of related Moco structures in molybdenum enzymes:

Page 3: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Questions asked of molybdoenzymes and their model compounds:

-What is the redox potential ( energy of) Mo redox reactions?

- What are the structural details? What is bond order? (angles, bond distances)

-How well do models mimic reactions of Mo in enzymes? in structure? in reactivity?

Page 4: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

A “second generation” Moco model:the Holm-Berg model

N

SSMo

O O

Mo(6+)O2(L-NS2)

N

SSMo

O

Mo(4+)O(L-NS2)

sol

Page 5: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Mimicking the Catalytic Reactions of Moco

Mo(6+)O2(L-NS2) Mo(4+)O(L-NS2)

PPh3O=PPh3

Me-S(=O)-MeMe-S-Me

DMSO = dimethylsulfoxideDMS = dimethylsulfide

Berg-Holm Model

Mo(6+)O2(L) + 2 H+ Mo(4+)O(L) + H2O

SO32- SO4

2-

2 e- acceptor (like FAD+ )

2 e- reduced (like FADH2

Sulfite Oxidase

Page 6: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

What would the Berg-Holm model system suggest?

• a 2 e- process between Mo(6+) and Mo(4+), and only the Mo(6+) and Mo(4+) ox. states are required.

• BUT, it was known that Mo(5+) plays a role (by EPR)

Page 7: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

O

Mo+6

OS

S

O

MoOS

S

O

Mo+4

S

S

O

Mo+4

OS

S

SO

OO

OS

O

OO

O

Mo+4

S

SH

H

O

Mo+5

OHS

S

a

- H+, - e -

- H+, - e -

+ SO32-

- SO42-

+ H2O

oxygen

atom

transfer

coupled

proton

electron

transfer

A proposed mechanism for Moco Catalysis of Sulfite Oxidation: OAT and CEPT

Page 8: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Why such a BIG Ligand on Mo?

Page 9: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Mo

S

S O

S

O

S

Mo

S

S

S

O

SX X=O

1st equivalent

Mo

S

S O

S

O

S

Mo

S

S

S

OS

MoSS

S

O

S

Mo SS

O

S

O

S

conproportionation2nd equivalent

•Mo(5+)- Mo(5+) dimer•CN = 6•Terminal vs bridging Mo-O

Step 1:

Step 2:

Typical Mo-oxo Chemistry

Page 10: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

BIG Ligand is intended to prevent dimerization

Except… it didn’t!!!Later researchers showed formation of

(L-NS2)Mo

O

O Mo(L-NS2)

O

Page 11: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

O

Mo OS

SX

O

Mo SS

SX

O

Mo OHS

SX

O

MoS

S

X

S

S

(a) (b) (c) (d) (e)

O

MoS

S

O

S

S

ASP

What is the sulfur donor ligand for the family of related Moco structures in molybdenum enzymes?

S

S

O

HN NH

HNNO

O

NH2

MoO NN

NH2

O

HO

P OP O

O

O

OO

OH

From X-ray diffraction ofprotein crystals, ~1994

Page 12: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Mo

The Ligand is calledMolybdopterin

pterin

dithiolene

nucleotide

Page 13: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

This week’s reactions:

1. MoO2(detc)2 + excess PPh3 --> RED

2. RED + propylene sulfide --> BLUE

3. Chromatography to separate:

Page 14: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Technique: Column Chromatography

Review:• chromatographic separations are based on:

• dipolar interaction of molecules with solid support (SiO2)• partitioning of molecule between support and solvent

In practice:• Silica gel column chromatography elutes most non-polar first, most polar last.• Different species may be selectively eluted with increasing the polarity of solvents, e.g., CH2Cl2, then acetone, then methanol

Page 15: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Propylene Sulfide - C3H6S

S + "S"

Expected reactivity??

Purpose?? Source of sulfur, formally S0

Related to the Blue Reaction:

Page 16: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Sulfur is strange!!!! That’s why the alchemists loved it. They thought that everything, every substancecould be made from the “proper” mixture of sulfur, mercury and salt.

Sulfur does not behave like its smaller cousin, O.

Elemental form: S8 vs. O=OS

S SS

S

SS

S

As ions: S2- & [S2]2- O2- & [O2]2- & [O2] -

polysulfides [S3]2- & [S5]2-

As ligands: M=S M(S2) M(S3) M(S4) M(S5)M

S S

M

S S

S

M

S S

S S

MoS

SS

S

S

disulfide trisulfide tetrasulfide pentasulfide

Page 17: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Technique: Infrared Spectroscopy

Application to Berg-Holm model and Mo-dimer:• detection of Mo=O groups

• number of absorption related to number Mo=O • frequency related to Mo oxidation state• frequency also reveals Mo-O-Mo

Infrared Spectroscopy helps assign sulfur ligand type:M=S has M=S ~ 450-500 cm-1

M(S2) has M-S ~ 500-550 cm-1 M(S3), M(S4) has M-S < 480 cm-1

Let’s try it …

Page 18: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

[Tp*Mo(X)(S4)]—

N

MoS

XN S

NN

N

N

HB

S

S

What is X?

Page 19: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Mo=S

B-H

C=NC-H

O-H ring

compound was determined to be [Tp*Mo(S)(S4)]—

Page 20: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

Mo=SMo=O

Product was determined to be

a mixture of both

[Tp*Mo(S)(S4)]— and

[Tp*Mo(O)(S4)]—

Page 21: The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.

What happens in reactions with Mo complexes?

Mo

S

S

S

OS

characteristics:• Mo(4+): could be oxidized or reduced• open (vacant) coordination site• Mo loves S

+ SMo

S

S S

S

O

S

?

characteristics:• Mo(6+):• filled coordination sphere• Mo loves S

Seems OK but is it right?How could we know for sure?????