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The Influence of Seed Dispersal Mechanisms on the Genetic Structure of Tropical TreePopulationsAuthor(s): J. L. Hamrick, Darlyne A. Murawski, John D. NasonReviewed work(s):Source: Vegetatio, Vol. 107/108, Frugivory and Seed Dispersal: Ecological and EvolutionaryAspects (Jun., 1993), pp. 281-297Published by: SpringerStable URL: http://www.jstor.org/stable/20046315 .Accessed: 07/11/2011 12:58
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Vegetatio 107/108: 281-297, 1993.
T. H. Fleming and A. Estrada (eds). Frugivory and Seed Dispersal: Ecological and Evolutionary Aspects. 281
? 1993 Kluwer Academic Publishers. Printed in Belgium.
The influence of seed dispersal mechanisms on the genetic structure of
tropical tree populations
J. L. Hamrick, Darlyne A. Murawski1 & John D. Nason
Departments of Botany and Genetics, University of Georgia, Athens, G A 30602, USA; l Present address:
Biology Department, University of Massachusetts at Boston,Boston, MS 02125, USA
Keywords: Allozymes, Genetic diversity, Genetic relatedness, Population density, Seed shadows, Size
classes
Abstract
Seed dispersal mechanisms should have a direct impact on the genetic structure of populations. Spe cies whose seeds are dispersed near the maternal plant (e.g. gravity or wind dispersal) or species whose
seeds are deposited in clumps or patches should have more fine-scale genetic structure than species whose seeds are dispersed singly by mobile animals. Furthermore, due to the overlap of seed shadows,
species with high adult densities should have less genetic structure than species with lower densities.
Allozyme analyses of three tropical tree species belonging to the moist tropical forest of Barro Colorado
Island, Republic of Panama, were used to describe variation in the scale and intensity of genetic structure
within their populations. The genetic structure of seedlings and immature trees in the low-density,
wind-dispersed species (Platypodium elegans) was the coarsest and strongest whereas genetic structure
in a population of Swartzia simplex var. ochnacea (high density, bird-dispersed) was both the finest and
the weakest. The genetic structure ofAlseis blackiana, a high-density, wind-dispersed species was inter
mediate in both degree and scale. In P. elegans and A. blackiana, which had 'J' shaped size distributions, the significant genetic structure seen in the smaller and intermediate diameter classes disappeared in the
largest diameter class. The loss of genetic structure was not observed in S. simplex, a species with a more
even size distribution.
Nomenclature: follows Croat, T. B. 1978. Flora of Barro Colorado Island. Stanford University Press, Stanford. Ca. 943 pp.
Introduction
Seed dispersal patterns can shape the genetic
composition and structure of plant populations.
Species with limited seed dispersal are likely to
have considerable genetic heterogeneity among
patches of new seedlings while species with more
extensive seed dispersal should have less spatial
genetic structure (Fleming & Heithaus 1981; Howe 1989; 1990). Genetic structure is also af
fected by the interaction of seed dispersal with
other ecological and genetic processes. Seed dep osition patterns, pollen dispersal, adult densities,
microhabitat selection and several aspects of the
recruitment ecology of species could have signif icant effects on the patterning of genetic variation
within populations (Howe & Smallwood 1982; Howe etal 1985; Hamrick & Loveless 1986; Loveless 1991).
Sexually reproducing plants disperse genes in
282
two ways (Levin 1981). Male gametes are dis
persed twice; from the pollen parent to the ma
ternal parent via pollen and from the maternal
parent as part of the genetic complement of the
embryo. Maternal gametes, in contrast, move only once via seeds. The potentially greater variance in
the dispersal distance of pollen relative to seeds
may, in part, explain why knowledge of a species'
pollination system allows relatively accurate pre dictions concerning the distribution of genetic di
versity within and among plant populations
(Table 1 A). An equivalent understanding of seed
dispersal mechanisms provides less satisfactory
predictions of the distribution of genetic diversity
(Table IB). The range of among-population ge netic heterogeneity (FST) among seed dispersal
categories is not as large and the mean FST val ues are not consistent with the species' apparent
potential for seed dispersal. In particular, species with animal dispersed seeds have higher mean
levels of among population genetic heterogeneity than their potential for long-distance seed dis
Table 1. The distribution of allozyme variation at polymorphic loci within and among populations of plant species classified ac
cording to their breeding system and their seed dispersal mechanism. From Hamrick & Godt (1989).
Categories Na Mean no.
populations
Mean no.
loci
HT Hs
A. Breeding system
Selfing 78
Mixed-animal 60
Mixed-wind 11
Outcrossing-animal 124
Outcrossing-wind 134
B. Seed dispersal
Gravity 161
Gravity-attached 11
Attached 52
Explosive 23
Ingested 39
Wind 121
20.3
(3.8)c
8.9
(2.1)
10.0
(3.1)
10.7
(2.1)
10.7
(1.6)
10.1
(1.1)
29.2
(15.8)
20.8
(5.7)
12.4
(2.7)
17.6
(6.5)
8.7
(0.9)
16.2
(0.7)
14.4
(0.8)
12.5
(3.6)
17.7
(0.7)
16.7
(0.9)
16.9
(0.6)
18.6
(1.8)
16.5
(0.9)
18.6
(1.4)
13.2
(1.1)
16.6
(0.9)
NS
0.334abb
(0.016)
0.304b
(0.022)
0.378a
(0.057)
0.310b
(0.010)
0.293b
(0.011)
0.306b
(0.010)
0.211c
(0.038)
0.325b
(0.024)
0.302b
(0.021)
0.394a
(0.020)
0.292b
(0.012)
0.149c
(0.016)
0.221b
(0.017)
0.342a
(0.054)
0.243b
(0.010)
0.259b
(0.011)
0.207b
(0.011)
0.171b
(0.031)
0.236ab
(0.021)
0.217b
(0.023)
0.305a
(0.022)
0.241ab
(0.011)
0.510a
(0.035)
0.216b
(0.024)
0.100c
(0.022)
0.197b
(0.017)
0.099c
(0.012)
0.277a
(0.021)
0.124b
(0.031)
0.257ab
(0.032)
0.243ab
(0.048)
0.223ab
(0.033)
0.143ab
(0.020) a
N, number of taxa; HT, total genetic diversity; Hs, genetic diversity within populations; FST, proportion of the total diversity
among populations. Levels of significance: *** P< 0.001; NS, not significant.
b Means followed by the same letter in a column are not significantly different at the 5% probability level.
c Standard errors are in parentheses.
persal would indicate (Loveless & Hamrick 1984; Hamrick & Godt 1989; Hamrick etal 1991).
The magnitude of spatial genetic heterogeneity
resulting from seed dispersal depends on several
factors: (1) The proportion of seeds that immi
grate and contribute gametes to the next genera tion of an established population (i.e. gene flow) versus the proportion that colonize new habitats.
Slatkin (1977), and more recently Wade & Mc
Cauley (1988) and McCauley (1991), have shown that the colonization of vacant habitats is not
strictly analogous to gene flow among established
populations. Thus, if most seed movement is
among established populations there will be less
genetic structure than if the majority of the seeds
colonize newly available habitats; (2) The density of reproducing adults. If seeds from several adults
colonize an open habitat, genetic structure would
be less than if successful colonists had come from
one or a few adults. The effect of low adult den
sities should be especially apparent for wind
dispersed species. Maternal plant density un
doubtedly effects species with animal-dispersed seeds but may do so in less direct and predictable
ways; (3) The foraging and deposition behavior of
the seed dispersal agent. At one extreme are an
imals that forage within the canopy of a single individual and subsequently deposit several seeds
(at least half-sibs) in a site suitable for seedling recruitment. High genetic heterogeneity among recruitment sites will result, but may be tempered if several independent deposition events occur.
At the other extreme are seed dispersal agents that forage across several maternal individuals
and deposit seeds individually across the land
scape. This pattern of foraging and seed dispersal should produce less genetic structure among re
cruitment patches. In this paper these predictions are tested by
examining the fine-scale genetic structure of three
tropical tree species with different combinations
of seed dispersal mechanisms and population densities. The specific questions addressed in
clude: (1) Do neighboring individuals have higher genetic correlations (i.e. more al?eles in common) than individuals located farther apart? (2) Do
species with the same seed dispersal mechanisms
283
but with different adult densities maintain differ
ent levels of spatial genetic heterogeneity? (3) Do
species with similar densities but different seed
dispersal mechanisms have different levels of spa tial heterogeneity? (4) Does the spatial genetic
heterogeneity found in smaller size classes carry over into larger size
classe^?
Procedures
The study site is in the moist tropical forest of
Barro Colorado Island, Republic of Panama.
Barro Colorado Island (BCI) is the location of a
field station managed by the Smithsonian Trop ical Research Institute and of a 50 ha. Forest
Dynamics Plot (FDP) established by S. P. Hub bell and R. B. Foster. Every individual on the
FDP larger than 1.5 meters in height and 1 cm in
DBH has been identified and its location mapped
(Hubbell & Foster 1983; Hubbell & Foster 1990). Much of the research described below is located on the FDP because a 5 m x 5 m grid system al
lows efficient and accurate mapping of individu
als. The study site for Swartzia simplex var.
ochnacea was not on the FDP because the se
lected site had higher densities of this species. The forest of BCI and the FDP is the location
of a long-term study effort to describe the genetic structure (e.g. Hamrick & Loveless 1989) and the
breeding structure (e.g. Hamrick & Murawski
1990) of several tropical tree species. We are cur
rently studying the fine-scale genetic structure of
four species. These species were chosen because
they are relatively common on the FDP, their size
structure is indicative of active seedling recruit
ment, they maintain high levels of allozyme poly
morphism and they represent a variety of breed
ing systems, pollinator syndromes, life forms and
seed dispersal mechanisms.
Alseis blackiana Hemsl
Alseis blackiana (Rubiaceae) is a canopy tree with
bisexual flowers (Table 2). Little is known of its
breeding biology but its small, protogynous flow ers are probably pollinated by butterflies or small
284
Table 2. Characteristics of four tropical tree species studied for their fine-scale genetic structure.
Species Family Growth form Breeding system Pollinator Dispersal agent
Alseis blackiana
Brosimum alicastrum
Platypodium elegans Swartzia simplex var.
ochnacea
Rubiaceae
Moraceae
Fabaceae (Papil) Fabaceae (Caesal)
Canopy tree Bisexual
Canopy tree Dioecious
Canopy tree Bisexual
Understory tree Bisexual
Bees, Butterflies
Wind?, Insects?
Small bees
Large bees
Wind
Bats, Arboreal mammals
Wind Birds
bees. Alseis blackiana flowers in April or May and
its slender wind-dispersed seeds are released from
January to March during the dry season. Aug
spurger (1986) estimated that the mean seed dis
persal distance was 94 m with a wind speed of
1.75 m per second. Alseis blackiana is a common
canopy tree on the FDP with more than 230 in
dividuals greater than 32 cm DBH (Table 3). It also has a large number of smaller individuals
distributed throughout the FDP.
A one-hectare study site was established on the
FDP from which the basal diameter and map coordinates of approximately 1000 individuals of
all size classes were obtained. Adult individuals
(> 15 cm in diameter) were also sampled from a
20 m border surrounding the core study area
(Fig. 1 A). Leaf material was collected from each
individual, freeze-dried on BCI and returned to
the University of Georgia for electrophoretic
analysis. Every individual was genotyped for 31
polymorphic loci.
Brosimum alicastrum (Pitt) C. C. Berg
Brosimum alicastrum (Moraceae) is a dioecious,
insect-pollinated canopy tree (Table 2). It may
flower from November to May but the majority of
the flowering occurs from January to March.
Fruits mature from May to October and are eaten
by a variety of arboreal mammals. Monkeys have
been observed to eat the outer layers of the fruit
and to drop the seeds, often leaving a large ac
cumulation of seeds under the crown of the ma
ternal tree. Bats are thought to play a principal role in long-distance seed dispersal. Brosimum al
icastrum occurs at moderate densities on the FDP
(Table 3). It is somewhat unusual in that it does
not show a strong 'J' shaped age distribution in
the sapling stages (Table 3). Rather, individuals
in the 1, 2, and 4 cm diameter classes occur at
nearly equal densities.
Since Brosimum has relatively few individuals
on the FDP we have begun to genotype all tagged individuals. Unfortunately, this work is not yet
complete. We have systematically searched
60 m x 60 m areas around six known female trees
to determine seedling densities. The location and
size of each seedling was recorded. In order to
compare levels of seedling recruitment due to lo
calized seed dispersal with recruitment due to
long-distance seed dispersal, four 40 m x 40 m
plots, established at least 60 m from known fe
male trees, were similarly searched for seedlings.
Table 3. Size distribution of four tropical tree species located on the Forest Dynamics Plot on Barro Colorado Island. Data are
based on the 1985 census (Foster & Hubbell, unpubl. data).
Species
Alseis blackiana
Brosium alicastrum
Platypodium elegans
Swartzia simplex var. ochnacea
Diameter class (cm)
1 2 4
4137 2000 894 193 208 257 30 41 24
905 1000 688
8 16 32
451 335 212 137 45 32 26 5 12
174 20 0
Total
64 128
26 0 8055 25 1 898 17 2 157 0 0 2787
285
A) Alseis blackiana + < 15cm diameter O s: 15cm diameter
B) Platypodium elegans
C) Swartzia simplex var. ochnacea -*?o-s-o
Fzg. 7. The sampling areas used to study fine-scale genetic structure in three tropical tree species. A.Aleis blackania. The Aleis
study plot consisted of a one hectare study site surrounded by a 20 m border. B. Platypodium elegans. The FDP is shown with
the location of the 16 seedling shadow plots. C. Swartzia simplex var. ochnacea. The WH2 site is shown with the nested seed
ling plot. Seedlings and tagged plants are plotted.
Platypodium elegans J. Vogel
Platypodium elegans (Fabaceae) is a canopy tree
with perfect flowers that are pollinated by small
bees (Table 2). The large (mean fruit wt. = 2 g; fruit length
= 10 cm) one-seeded samaras are dis
persed up to 100 m by the prevailing north-east
winds during the dry season (Augspurger 1983).
286
Mean dispersal distances of 34 m were estimated
at wind speeds of 1.75 m per second (Augspurger
1986). Flowering is synchronous and may occur
twice a year, with many more seeds being pro duced in some years than in others (Augspurger
1983; Augspurger & Kelly 1984). Flowering gen erally occurs from April to June and fruits are
dispersed the following February to April. A large tree is capable of producing 4000-5000 seeds
during each flowering period. When seed produc tion is high, compact seed shadows are formed
downwind from the seed parent (Augspurger
1983). Every tagged Platypodium individual (> 1.0 cm
DBH) on the FDP was collected and genotyped for 24 polymorphic loci as part of the original
genetic survey of this species (Hamrick & Love
less 1989). To better analyze fine-scale genetic
structure, we established a 50 m x 100 m plot around each of 16 reproducing adults on the FDP
(Fig. IB). These plots extended 25 m upwind and
75 m downwind from each maternal individual.
Seedlings found within these plots were tagged,
mapped, and analyzed for 20 polymorphic loci.
Three 40 m x 40 m plots located at least 60 m
away from mature trees were also searched to
determine background levels of seedling recruit
ment outside of seed shadows associated with
maternal trees.
Swartzia simplex var. Ochnacea (A. DC) Cowan
Swartzia simplex var. ochnacea is an understory tree or shrub. It is bisexual and self-compatible
(Harcombe & Riggins 1968; Wyatt 1981) with
large showy lemon-colored flowers that are pol linated by large bees (Table 2). Swartzia flowers
in May or June and its fruits mature in Decem
ber or January. There are typically two to four
seeds per fruit and the seeds are bird dispersed.
Flowering and fruiting is highly irregular and un
predictable. Swartzia is a common element in the
understory of the FDP with nearly 3000 individ
uals above 1 cm in DBH (Table 3). Large indi
viduals are rare but individuals 4cm in DBH or
larger may flower and produce fruit.
The study site (WH2) was approximately 180 m x 70 m and was located in second-growth forest where Swartzia occurred at high densities
(Fig. 1C). In site WH2 every Swartzia individual
taller than 1.5 m was tagged, mapped, its basal
diameter measured, and a leaf was collected
for electrophoretic analysis. In a centrally located
area of about 110 m x 50 m (exact shape subject to dense treefalls) every plant below 1.5 m
was identified, tagged, measured, and collected.
Each individual was analyzed for 19 polymorphic loci.
Data analysis
Since the four species had been previously stud
ied, measures of genetic diversity among collec
tion sites separated by 100-200 meters on the
FDP were available (Hamrick & Loveless 1989). On the sites established to study fine-scale genetic
structure, individuals representing different diam
eter classes were divided into subplots and, where
sample sizes allowed, standard measures of ge netic structure were calculated. These included
Wright's (1951) FST and FIS values. The FST value measures the excess of homozygotes rela
tive to Hardy-Weinberg expectations in the pop ulation which are caused by al?ele frequency dif
ferences among population subdivisions (i.e. the
Wahlund effect). Thus, FST measures the level of
genetic heterogeneity among population subdivi
sions. The FIS value is the deviation from Hardy
Weinberg expectations within each population subdivision averaged over all subdivisions. A
positive FIS value indicates an excess of homozy
gotes within the subdivisions under consideration.
Statistical significance of FST values were exam
ined by chi-square test: %2 = 2N FST (a
- 1) with
df = (a
- 1) (n
- 1), where N is the total number of
individuals in the population subdivision, a is the
number of al?eles per locus, and n is the number
of population subdivisions (Workman and
Niswander 1970). The statistical significance of
FIS was also examined by chi-square test: y2 =
FIS
2N(a -
1) with df = (a -
1) (Li & Horowitz 1953). The FST and the FIS values were compared among
different diameter classes within species and were
also compared among species. Individuals within different diameter classes of
each species were compared to determine if near
neighbors have more al?eles in common than ran
domly chosen individuals. Three diameter classes
were chosen for the three species with genetic data (Alseis, 0-2 cm, 2-8 cm and > 8 cm; Platy
podium, 0-2 cm, 2-15 cm and > 15 cm; Swartzia, 0-2 cm 2-4 cm, and >4 cm.) For each diame
ter class the mean number of al?eles in common
per locus (NAC) between near-neighbors sur
rounding up to 100 different randomly chosen
focal individuals was calculated by modifying the
procedure developed by Surles etal. (1990). Where sample sizes were adequate this analysis was conducted for neighbor groups ranging from
two to 60 individuals. A grand mean and variance
for each near-neighbor group size was calculated
across the 100 focal individuals. The mean NAC
for a second set of individuals was calculated by
randomly sampling from 2 to 60 individuals of the
same diameter class for comparison. This proce dure was replicated 100 times for each group size
and mean NAC values were calculated. The NAC
values generated by the random comparisons were compared to the near-neighbor NAC values.
Ratios of the near-neighbor NAC value to the
random NAC value were calculated for each di
ameter class. These ratios were necessary for in
terspecific comparisons since species with more
genetic diversity will have lower NAC values.
Results
Alseis blackiana
A total of 999 individuals were sampled from the
one hectare study site on the FDP. The 0-2 cm
diameter class accounted for 794 individuals (0-1 cm = 517 individuals, 1-2 cm = 277 individuals)
while the 2-8 cm and > 8 cm diameter classes
had 168 and 37 individuals, respectively. Ten
adults were also sampled from a 20 meter border
surrounding the study plot. Distinct clumps of
individuals in the smallest diameter class were
287
found in a central location on the plot with a
sparse canopy and were not close to any adults.
Smaller clusters of individuals in the 0-2 cm and
2-8 cm diameter classes occurred on other parts of the study site (Fig. 1 A).
Measures of genetic diversity were calculated
at various spatial scales on the FDP and on the
one hectare study site. The four sample sites on
the FDP consisted of individuals greater than 1
cm DBH and were separated by approximately 200 m (Hamrick & Loveless 1989). The FST value
found among these four sites was 0.034 (Table 4),
indicating that moderate but significant heteroge
neity (x3 =
14.28;P< 0.001) in al?ele frequencies occurs at this spatial scale (Table 4). The mean
FIS value within each sample site (Table 5) was
0.104 (xi =
2.34; P<0.25). Since these sample sites included all diameter classes greater than
1 cm and covered rather large areas, the FIS value
includes, in addition to inbreeding, a Wahlund
effect among diameter classes and among spatial subdivisions within each sample site.
On the one hectare study site, different subdi
vision sizes were used for the three diameter
classes to insure that the FST and FIS values were
not affected by small sample sizes. A minimum of
15 individuals were required for a subdivision to
be included for analysis. Individuals in the 0-2
cm diameter class were assigned to 20 m x 20 m
subdivisions of the one-hectare study site to max
imize the number of subdivisions included in the
Table 4. Levels of genetic diversity among population subdi
visions (FST) of various spatial scales. The FST values on the
FDP represent collection sites separated by approximately 100 m (from Hamrick & Loveless 1989). The study sites were
subdivided at different spatial scales for the different diame
ter classes (I, II, III). See the text for the actual spatial scales
and diameter classes used for each species.
Species FDP Study site
Alseis blackiana 0.034
Brosium alicastrum 0.050
Platypodium elegans 0.051
Swartzia simplex 0.037
1 fST among seedling shadows.
I II III
0.041 0.027 0.015
0.091l
0.021 0.019 0.031
288
Table 5. Deviations from Hardy-Weinberg expectations
within population subdivisions (FIS) of various spatial scales.
The FIS values from the FDP are for collection sites separated
by approximately 100 m. The study sites were subdivided at
different spatial scales for the different diameter classes (I, II,
III). See text for the actual spatial scales and diameter classes
used for each species.
Species FDP Study site
I II III
Alseis blackiana 0.104 0.048 0.054 -0.014
Brosium alicastrum 0.120 - - -
Platypodium elegans 0.092 0.012l
Swartzia simplex 0.161 0.103 0.010 0.043
1 FIS within seedling shadows.
analyses. The FST value among the 14 subdivi
sions containing a minimum of 15 individuals was
0.041 indicating that highly significant heteroge
neity (#13 =
57.4, P< 0.001) in al?ele frequencies occurred among these arbitrarily defined subdi
visions. The FIS value over all loci was 0.048
(x\ =
1.61; P<0.25). To obtain adequate sample sizes for the 2-8cm diameter class, the one hect
are plot was divided into four 50 m x 50 m sub
divisions. The FST value among these subdivi
sions was 0.027 (xl =
4.07; P<0.05) and the FIS value over all loci was 0.054 (x?
= 0.49; P < 0.50).
The study site was divided into two equal subdi
visions for the analysis of the largest diameter
class. The FST value among these two sites was
0.015 (x?= 1.35; P<0.25) and FIS averaged across all loci was 0.014 (x\
= 0.009; P<0.99).
We also calculated FST among the three size
classes. The FST value was low (0.004) but was
significant (%^ =
7.26; P<0.05) because of the
large sample sizes involved. The mean FIS value
within each diameter class averaged across all
loci was 0.083 (/? = 6.94; P<0.010). The signif
icance of the FIS values indicates that there is a
significant h?t?rozygote deficiency within the di
ameter classes. However, since each diameter
class covered the one-hectare plot, the FIS values
include a significant spatial Wahlund effect. The
FIS value calculated for the spatial subdivisions
of each age class is largely free of this confound
ing effect and is more representative of the true
inbreeding coefficient.
In the 0-2 cm diameter class the number of
al?eles in common (NAC) among nearest neigh bors (1.399) was significantly higher (P<0.05) than the value for randomly chosen individuals
(Fig. 2A). The NAC values drop sharply as group size increases from 4 to 20 individuals. In near
neighbor groups of 20 to 60 individuals, NAC
values are nearly equal. Additional examination
indicated that the near-neighbor NAC value con
verges with the random NAC value at a group size of approximately 240 individuals. The ratio
of the near-neighbor NAC value to the random
NAC value for group size 2 was 1.032 and de
creased to 1.020 at group size 10 and to 1.018 at
group size 60 (Table 6). In the 0-2 cm diameter
class the mean distance of neighbors from the
focal individual was approximately lm for group size 2, increased steeply to approximately 5 m for
group size 20 and then increased more slowly to
7.6 m for group size 60 (Fig. 2A). The NAC value for near-neighbor individuals
in the 2-8 cm diameter class was 1.400 for a
group size two, and decreased sharply to 1.358
for group size 20 (Fig. 2B). For group size 60 the
NAC value was 1.338. The random NAC values
across all group sizes in this diameter class (1.335) were somewhat lower than that for the 0-2 cm
class. By group size 60 the near-neighbor NAC
Table 6. The ratio of near-neighbor NAC values to random
NAC values for different diameter classes and group sizes.
Species Diameter Group size
class -
(cm) 2 10 20 60
Alseis blackiana 0-2 1.032 1.040 1.020 1.019 2-8 1.040 1.034 1.025 1.002
>8 1.018 0.992 0.994 0.998
Platypodium elegans 0-2 1.071 1.042 1.031 1.001
2-15 1.064 1.036 1.017 1.000
>15 1.016 0.991 1.001 -
seedlings 1.049 1.079 1.060 1.062
Swartzia simplex 0-2 1.026 1.015 1.003 0.998
2-4 1.031 1.006 1.004 1.003
>4 1.037 1.013 1.011 1.010
289
A) 0-2cm diameter
1.46
20 30 40
Group size
B) 2-8cm diameter
1.46-1 Mean distance
Neighbor
Random
20 30 40
Group size
C) >8cm diameter 1.46
Mean NAC
1.384
1.364
1.344
1.32
1.30
Mean distance
Neighbor
Random
Mean distance
(m)
10 15 20
Group size 25 30
D) Mean NAC by distance 1.46
1.344
1.32
1.30
0-2cm diameter
2-8cm diameter
>8cm diameter
10 20 30 40 Mean distance (m)
50 60
Fig. 2. The relationship of near-neighbor and random NAC values for different group sizes or spatial separation of Alseis blackiana
individuals belonging to three diameter classes. A. 0-2 cm. B. 2-8 cm. C. >8 cm. D. The NAC values for the three diameter
classes versus distance among individuals being compared. Vertical bars represent ? one standard error.
had nearly converged with the random NAC
value. The ratio between the near-neighbor NAC
and the random NAC was 1.040 for group size 2, 1.025 at group size 20, and 1.002 at group size 60.
The mean distance separating an individual at the
center of a group from its near-neighbors was
about 3 m for group size 2, 10 m for group size 20
and nearly 21 m for group size 60 (Fig. 2B). For the largest diameter class (> 8 cm) groups
of more than 40 individuals could not be exam
ined because of the limited number of individuals.
The near-neighbor and random NAC values for
this diameter class were consistently higher than
values for the same group size in the smaller di
ameter classes (Fig. 2C). Nearest neighbors had
NAC values of 1.436 which decreased to approx
imately 1.386 at group size 20 and 1.393 at group
size 40. The NAC value dropped sharply from
group size 2 to group size 10 and then leveled off
at values somewhat below the random values.
The ratio between random and neighbor NAC
values was 1.018 for group size 2 and decreased
to 0.994 for group size 20 and to 0.998 for group size 40. The mean distance separating a central
individual from its neighbors was 10 m for the
nearest-neighbor comparisons and increased to
43 m when 30 individuals were compared
(Fig. 2C). NAC values were compared among the three
diameter classes as a function of the mean dis
tance separating individuals in a near-neighbor
group from its central individual (Fig. 2D). The
NAC values for the 0-2 cm and the 2-8 cm di
ameter classes decreased from approximately
290
1.417 and 1.400 to 1.364 and 1.338, respectively, as distance among neighbors increased (i.e. in
creasing group sizes). The curves for the two
smaller diameter classes were nearly identical. Al
though mean distances were much larger for the
largest diameter class and the NAC values were
also higher, the shape of the curve was similar to
that for the smaller diameter classes until approx
imately 20 m. Beyond 20 m there was no rela
tionship between NAC and mean distance among individuals.
Brosimum alicastrum
The only data on genetic differentiation presently available for Brosimum comes from the original
genetic surveys on the FDP by Hamrick & Love
less (1989). The level of genetic differentiation
(FST) among the four sample sites on the FDP
was 0.050 (xl =
28.80; P< 0.001). The mean FIS value across all loci was 0.120 (Xi= 4.15;
P<0.05). This FIS value includes a Wahlund ef
fect due to spatial and temporal genetic hetero
geneity. In order to compare recruitment due to local
ized versus long distance seed dispersal, the den
sity of seedlings in 60 m x 60 m plots centered on
six female individuals were compared to four
40 m x 40 m plots established 60 m away from
known females. The density of seedlings around
the maternal trees ranged from 0.0 to 1.83 seed
lings per 100 m2 with a mean of 0.99 (sd =
0.30)
per 100 m2. The range for the four 40 m x 40 m
plots was 0.06 to 1.00 individuals per 100 m2 with
a mean of 0.47 (sd =
0.23) individuals per 100 m2.
The mean seedling densities of maternal and
isolated plots are not significantly different due
to high among plot heterogeneity in seedling numbers.
Platypodium elegans
Seed shadows of 16 mature trees averaged 1.36
(sd =
0.61) seedlings per 100 m2. There was ex
tensive heterogeneity among adult trees with no
seedlings found associated with one adult, while
9.2 seedlings per 100 m2 were found around the
adult with the highest seedling density. No Platy
podium seedlings were found in three 40 m x 40 m
plots established in areas 60 m from adult trees.
Genetic structure in Platypodium was measured
at two spatial scales. First, genetic relationships between established individuals from throughout the FDP were compared. We also compared the
genetic relationships of seedlings within and
among the 50 m x 100 m plots centered around
16 adults. The level of genetic diversity among the
three collection sites located on the FDP (FST) was 0.051 (xl= 18.87, P<0.001) (Table4). The mean FIS value across all loci was 0.092 (x\
=
1.60; P<0.25) (Table 5). Comparisons of genetic
heterogeneity among the six seedling shadows
with more than 15 seedlings produced a FST value
of 0.091 (x25= 174.72; P< 0.001). The mean FIS value within the seed shadow plots was 0.012
(Z? = 0.14; P< 0.750). In the 0-2 cm diameter class located through
out the FDP the number of al?eles in common
among near-neighbors (1.530) was higher than
when random individuals were compared (1.426)
(Fig. 3A). NAC values decreased as group sizes
increased to six individuals. Beyond group size 10
there was a gradual convergence of the neighbor values to the corresponding random values. The
NAC ratio was 1.071 for group size 2, 1.031 at
group size 20 and 1.001 at group size 60 (Ta ble 6). The mean distance of neighbors from a
central individual in the 0-2 cm diameter class
was approximately 25 m for group size 2, increased to approximately 75 m for group size 10
and then increased to 275 m for group size 60
(Fig. 3A). The NAC value for near-neighbors in the 2-15
cm diameter class was 1.505 for group size 2 and
decreased to 1.415 for group size 20 (Fig. 3B). At
group size 60 the NAC had dropped to 1.395, and had converged with the random comparisons. Random comparisons within this diameter class
were equal to the random values for the 0-2 cm
diameter class. The ratio between the near
neighbor NAC and the random NAC was 1.067
for group size 2 but only 1.017 at group size 20
(Table 6). The mean distance of neighbors from
291
A) 0-2cm diameter 1.55
1.50
1.45
Mean NAC
1.40
1.35
1.30 20 30 40
Group size
B) 2-15cm diameter 1.55
1.50
1.45
1.40
1.35H
1.30
Mean distance
-,-.-1-1-1- -1-.-,-r 10 20 30 40 50 60
Group size
C) >15cm diameter 1.55-H
1.50
1.45 Mean NAC
1.40
1.35
1.30
- Mean distance
10 15 20
Group size
D) Mean NAC by distance
1.55
1.50
1.45 H
1.40
1.35
1.30
- 0-2cm diameter - 2-15cm diameter - >15cm diameter
0 50 100 150 200 250 300 350 400 Mean distance (m)
E) Seedlings in seed shadows
1.55
1.50
1.45 Mean NAC
1.40H
1.35
1.30
Mean distance
~8 Mean distance
6 (m)
20 30 40
Group size
Fig. 3. The relationship of near-neighbor and random NAC values for different group sizes or spatial separation of Platypodium
elegans individuals belonging to four diameter classes. A. 0-2 cm B. 2-15 cm C. > 15 cm D. The NAC values for the three di
ameter classes versus distance among individuals being compared. E. The NAC values for seedlings belonging to defined maternal
seed shadows. Vertical bars represent + one standard error.
a central individual was about 30 m for group size
2, 110 m for group sizes of 10 and 375 m for
group sizes of 60 (Fig. 3B).
There were fewer group sizes available for the
largest diameter class because of the limited num
ber of individuals. Near-neighbor NAC values for
292
this diameter class were consistently lower than
values for the same group sizes in the smaller size
classes (Fig. 3C). Nearest neighbors had NAC
values of 1.430 which changed to approximately 1.424 for group size 10. The ratio between ran
dom and near-neighbor NAC values was 1.016
for group size two and changed to 1.001 at group size 20. The mean distance separating individu
als from a central individual was 75 m for the
nearest-neighbor comparisons and increased to
340 m at group size 30.
The NAC values of the 0-2 cm and the 2-15
cm diameter classes were similar to each other in
having a close association with distance; as dis
tance among neighbors increased (i.e. increasing
group sizes) NAC values decreased from 1.525 to
approximately 1.400 (Fig. 3D). In contrast, for
the largest diameter class there was little relation
ship between NAC and distance.
NAC values were also calculated between
individuals within the larger seed shadows
(Fig. 3E). Near-neighbor comparisons were lim
ited to seedlings belonging to the same seed
shadow, while random comparisons were made
between individuals selected from each of the seed
shadows. The NAC values for the nearest
neighbor comparison (group size 2) was 1.446. At
group size 20 and group size 60 the NAC values
were 1.426 and 1.425 respectively. The NAC val
ues across all group sizes for the random com
parisons were much lower (1.345). There was lit
tle convergence towards the random NAC value
by the neighbor comparisons. The ratio between
the near-neighbor NAC and the random NAC
was 1.049, 1.060, and 1.062 for seedlings with
group sizes of 2,20 and 60 respectively. The mean
distance between neighbors was near 1 m for
group size 2, 7 m for group size 20 and 11.8 m for
group size 60. There was little relationship be
tween distance and NAC within the seedling shadows (Fig. 3E).
Swartzia simplex var. ochnacea
The four sites analyzed on the FDP (Hamrick &
Loveless 1989) consisted of individuals greater
than 1cm DBH and were separated by approxi
mately 200 m. The FST value among these four
sites was 0.037 (Table 4) indicating that signifi cant genetic heterogeneity (xl = 73.04; P<0.001) occurs among different subdivisions of the FDP.
The mean FIS value within each site was 0.161
(Xi =
25.58; P < 0.001) indicating a significant de
viation from Hardy-Weinberg expectations (Ta ble 5). This FIS value includes, in addition to in
breeding effects, any spatial and temporal genetic
heterogeneity that occurs within these collection
sites.
A total of 686 individuals were sampled from
the WH2 study site. The 0-2 cm diameter class
consisted of 262 individuals while the 2-4 cm
class and individuals larger than 4 cm included
266 and 158 individuals, respectively. There did
not appear to be any distinct clumping of indi
viduals (Fig. 1C). On WH2 different subdivision sizes were used for the three diameter classes to
minimize the variance in FST and FIS due to small
sample sizes. For the 0-2 cm class, FST among the eight 30 m x 30 m subdivisions with more than
15 individuals (Table 4) was 0.021 (x? = 11.00;
P< 0.100). The mean FIS value was 0.103
(X\ = 2.78, P < 0.100) (Table 5). The FST value for the eight 30 m x 30 m subdivisions with more than
15 individuals in the 2-4cm diameter class (Ta ble 4) was 0.019 f?= 10.11; P< 0.100). The
mean FIS for this diameter class was 0.010
(Xi =
0.03; P < 0.750). To obtain adequate sample sizes in the largest diameter class (>4 cm), WH2
was divided into six 36 m x 36 m subdivisions
containing at least 14 individuals. The FST among the subdivisions was 0.031 (xl
= 9.80; P< 0.100)
while the mean FIS within these subdivisions was
0.043 (x? = 0.29; P < 0.500). Values of FST (0.004;
Xi = 5.82; P<0.100) and FIS (0.069; x?
= 3.47; P< 0.100) were also calculated among the three
diameter classes. Since this FIS was based on
individuals from all sections of the plot it may contain a significant Wahlund effect.
The NAC among near-neighbors in the 0-2 cm
diameter class (1.356) was higher than the NAC
based on random comparisons (1.322) (Fig. 4A). The NAC values decreased rapidly as group size
increased to 20. Above group size 20, the NAC
293
A) 0-2cm diameter 1.40
B) 2-4cm diameter
Mean distance
Neighbor
Random
20 30 40
Group size
Mean distance
Neighbor Random
20 30 40
Group size
C) >4cm diameter 1.40
20 30 40 Group size
D) Mean NAC by distance 1.40
0-2cm diameter
2-4cm diameter
>4cm diameter
10 15 20 Mean distance (m)
30
Fig. 4. The relationship of near-neighbor and random NAC values for different group sizes or spatial separation o? Swartzia simplex
individuals belonging to three diameter classes. A. 0-2 cm B. 2-4 cm C. >4 cm D. The NAC values for the three diameter classes
versus distance among individuals being compared. Vertical bars represent + one standard error.
among neighbors was equivalent to the random
NAC. The ratio between the neighbor and the
random NAC for group size 2 was 1.026 while the
ratios for group sizes 20 and 60 were 1.003 and
0.998, respectively. The mean distance from a
central individual to its near-neighbors was 2 m
for group size 2 and increased steadily to 14 m for
group size 60 (Fig. 4B). The NAC for near-neighbor comparisons
within the 2-4 cm diameter class was 1.381 for
group size 2, decreased sharply to 1.359 for group size 10 then leveled off near the random NAC
(1.350) after group size 20 (Fig. 4B). Ratios be
tween near-neighbor and random NAC values
ranged from 1.031 for group size 2, to 1.006 for
group size 10 and 1.004 and 0.997 for group sizes
20 and 60, respectively. The mean distance among
neighbors was about 3.5 m for group size 2, 12 m
for group size 20 and 21m for group size 60
(Fig. 4B). For the largest diameter class (>4cm) NAC values were highest (1.380) when nearest
neighbors were compared (Fig. 4C). At a group size of 10, NAC had decreased to 1.353. Beyond
group size 10, NAC values level off, although they never approach the random values (1.335). The
ratio between random and neighbor NAC values
was 1.037 for group size 2 but decreased to 1.013
by group size 10. The mean distance separating
near-neighbors was 4 m for group size 2 and
steadily increased to 29 m by group size 60
(Fig. 4C). The NAC values for the three diameter classes
294
were related to the mean distances among near
neighbors (Fig. 4D). The NAC for the smallest
diameter class decreased from 2.5 m to approxi
mately 10 m and then leveled off between 10 m
and 15 m. The curves for the two larger diame
ter classes decreased between 2.5 m and 10 m
and then leveled off. Fig. 4D also illustrates that
NAC values of the 0-2 cm diameter class are
somewhat lower than values for the two larger size classes.
Discussion
Significant spatial genetic heterogeneity was ob
served on the FDP for these tropical tree species.
Significant or near significant levels of genetic het
erogeneity were also found at much smaller spa tial scales for the smaller diameter classes of Alseis
and all diameter classes of Swartzia. The largest
spatial genetic heterogeneity, however, was seen
among the seedling shadows of Platypodium adults. This is not surprising since the seedling shadows should consist primarily of sibs. Al
though there was some overlap of seedling shad
ows (Fig. IB) genetic heterogeneity among seed
ling plots was not greatly reduced since seedlings were primarily located near maternal individuals
and away from plot margins. The NAC analyses demonstrate that near
neighbors in the small and intermediate size
classes of each species share more al?eles than
individuals located further apart. The most likely
explanation for this observation is that spatially clustered individuals have at least one parent in
common. Thus, even though there may be con
siderable mixing of seed shadows in the high den
sity species (i.e. Swartzia and Alseis) near
neighbors tend to be more closely related than
randomly paired individuals.
Species with similar densities but different seed
dispersal mechanisms have somewhat different
levels of fine-scale genetic structure. Although we
couldn't compare the fine-scale genetic structure
of Platypodium and Brosimum, the distribution of
seedlings on the FDP indicates that the wind
dispersed Platypodium should have more genetic
heterogeneity among seedling shadows than the
more evenly distributed seedlings of the animal
dispersed Brosimum. The results of the NAC
analysis for Platypodium confirms that near
neighbor pairs of seedlings within the seed
shadow plots have a higher proportion of their
al?eles in common than expected by chance. We
would predict that pairwise comparisons between
the Brosimum seedlings should produce relatively lower NAC values due to the mixture of seedlings from different maternal trees.
At equal densities more structure should exist
within populations of the wind-dispersed Alseis
than for the bird-dispersed Swartzia. This is the
case in the smaller diameter classes where Alseis
has higher NAC ratios than Swartzia (Table 6). The NAC values for Swartzia drop more quickly with increasing group sizes, indicating either that
patches of relatives contain fewer individuals or
are more overlapping in Swartzia than in Alseis.
Comparisons of species with similar seed dis
persal mechanisms but different densities are also
consistent with expectations. At the spatial scale
of the FDP the two species with lower densities, P. elegans and B. alicastrum, have higher FST val
ues indicating that they have more genetic heter
ogeneity among collection sites separated by 100-200 m than the more continuously distrib
uted A. blackiana and S. simplex. This heteroge
neity may be due to the lower number of Platy
podium and Brosimum adults that contribute genes to the different sections of the FDP.
At a smaller scale the existence of patches of
related individuals is not surprising for the low
density species (Platypodium) but is more unex
pected for species with several adults per hectare
(Alseis and Swartzia). Evidently small patches of
related individuals exist in the smaller diameter
classes of these high density species even though there must be considerable overlap of the seed
shadows. In the two species with wind-dispersed
seeds, the lower NAC ratios o? Alseis relative to
those of Platypodium indicate that patches of
Alseis seedlings are derived from more than one
maternal individual. The potential for Alseis seeds
to move more than 100 m (Augspurger 1986) makes the mixture of seed shadows likely. The
genetic structure seen in the seedling (0-2 cm) diameter class of Alseis carried over into the sap
ling diameter class (2-8 cm). The chief difference
in the genetic structure of these two diameter
classes was that the NAC values of the sapling class decreased at lower group sizes and that the
mean distance between near-neighbors was
greater. This is probably due to the loss of indi
viduals from the family patches as the seedling cohorts thin. When Platypodium and Alseis reach
the largest diameter class most of the genetic structure observed in the seedlings has been lost.
This is almost certainly due to the disappearance of the patch structure in the large diameter classes
of these species; as natural demographic pro cesses occur, only one (or perhaps none) of the
members of a seedling patch survive to the larg est size class. As a result, the spatial distribution
of individuals becomes more regular and genetic structure disappears.
A somewhat different picture is seen for Swart
zia. In this species the largest size class (>4 cm) retains substantial fine-scale genetic structure. It
is not clear why Swartzia behaves differently from
Platypodium and Alseis but it may be due to the
more even distribution of individuals within the
three diameter classes. The lack of a T shaped size distribution in WH2 may indicate that there
is less mortality within seedling patches. As a
result, the original family structure may be main
tained in the larger diameter classes.
In Alseis and Swartzia the larger diameter
classes have higher NAC values for both the
near-neighbor and the random comparisons. There are at least two factors that could cause
NAC to increase with size. First, if genetic diver
sity within the study site decreased in the older
age classes both the neighbor and the random
NAC values would increase. Second, if there was
uniform selection for certain multilocus genotypes both NAC values would increase. For Swartzia
and Alseis there is no indication that genetic di
versity is lower or that there is uniform multilocus
selection in the large diameter class. There is
however, evidence that the larger diameter classes
have a higher proportion of heterozygous individ
uals. Inbreeding coefficients (FIS, Table 5) are
295
largest in the smallest diameter class of both spe cies. In Alseis the largest size class has the high est NAC and lowest FIS values. For Swartzia the
major difference in FIS values comes between the
smallest and the two larger diameter classes (Ta ble 5). This is also where differences in NAC val
ues occur. We conclude, therefore, that increases
in heterozygosity associated with size has pro duced an increase in the NAC value.
The calculation of the number of al?eles in com
mon between pairs of individuals has proved to
be a sensitive method to measure fine-scale ge netic structure. The NAC value not only provides an estimate of genetic similarities between indi
viduals but NAC can also be used to determine
the number of individuals within a patch of re
lated individuals and the distances between these
individuals. When the number of individuals in
any diameter class is large our protocol provides an accurate estimate of the difference in genetic
similarity between near-neighbors and randomly chosen individuals.
There are, however, additional ways that the
NAC procedure can be used to describe fine
scale genetic structure. In this paper we com
pared randomly chosen central individuals with
their 1, 3, 5, 9 etc nearest-neighbors. By includ
ing the NAC comparisons from the smaller group sizes in the estimates of the NAC for the larger
group sizes there is a carryover effect that over
estimates mean patch sizes. Actual patch sizes
could be better defined by comparing the central
individual with its five nearest neighbors, then
with its 6-10 nearest neighbors etc. Also, it would
be useful to convert NAC ratios into measures of
genetic relatedness. This was done by Surles et al
(1990) for open-pollinated families of Gleditsia
triacanthos and Robinia pseudoacacia. Since the
expected values for half- or full-sibs vary accord
ing to the genetic diversity in the population these
values should be calculated separately for each
population. Nevertheless, it appears that the NAC
procedure has considerable potential as a mea
sure of multilocus genetic structure in plant pop ulations.
296
Concluding remarks
Considerable fine-scale genetic structure exists in
these tropical tree populations. Furthermore, the
magnitude and spatial distribution of genetic structure is related to the seed dispersal mecha
nisms and adult densities that characterize each
species. Although it is dangerous to generalize from a sample of one species per density and seed
dispersal category, our results indicate that spe cies with wind-dispersed seeds and with lower
densities develop more genetic structure in their
seedlings than species with animal dispersed seeds or higher densities. The effects of seed dis
persal on the establishment of genetically related
near neighbors (i.e. half- and full-sibs) has impli cations for demographic and reproductive pro cesses. For example, in species whose seed dis
persal mechanisms promote the development of
strong patch structure, competition for water, nu
trients, and light will often be among related in
dividuals. In addition, the spread of pathogens
among susceptible seedling cohorts may be facil
itated by the short distances separating related
individuals (Augspurger & Kelly 1984). In species where fine-scale genetic structure established dur
ing seed dispersal persists into the adult genera tion (i.e. Swartzia), the likelihood of inbreeding
will be increased (Hamrick & Loveless 1986).
Biparental inbreeding should be lower in species where patch structure deteriorates with age (i.e. Alseis and Platypodium). Analyses of the breeding structure of tropical trees (e.g. Hamrick & Mu
rawski 1990) coupled with analyses of fine-scale
genetic structure should greatly enhance our un
derstanding of how demographic and evolution
ary processes act to produce the next generation of reproductive adults.
Acknowledgements
We wish to thank the Smithsonian Tropical Re
search Institute for the use of their facilities on
BCI. Thanks are also due to Steve Hubbell and
Robin Foster for all the help and encouragement
they have given over the years. Sue Sherman
Broyles gave valuable technical assistance during the electrophoretic analyses. A. Schnabel and
M.D. Loveless helped with the collection of Alseis
blackiana. D. Santamar?a, R. Perez and C. Chung
provided able field assistance. Funds were pro vided by a grant from the Mellon Foundation to
J.L.H. and by NSF grants BSR 860083 and BSR 8918420.
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