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The Biodiversity Heritage Library and bibliographic citations: towards new user services in support of a Global Names
Architecture
Trish Rose-Sandler, William UlateMissouri Botanical Garden
2012 Annual TDWG MeetingBeijing, ChinaOct.21,2012
A brief history…
The Biodiversity Heritage Library
www.biodiversitylibrary.org
The Biodiversity Heritage Library
Genesis: “BHL Article Repository”
• Idea first introduced at TDWG 2008, Fremantle (by BHL, many have discussed for years)
• YouTube for biodiversity articles• Needed (need) a way to access articles in BHL– “BHL has no articles.”– BHL has hundreds of thousands of articles but you
can’t search for them via author, article title search– Can find via “article coordinates” using BHL’s UI &
OpenURL resolver: Journal / Volume / Start Page / Year
CiteBank
• Objectives– Create a repository for community-vetted
taxonomic bibliographies.– Ability to ingest, display, download, and index
articles so that the BHL can operate as an article repository.
– Provide links to content published online through other repositories.
• Launched on December 6th 2010
Citations today: http://citebank.org
Citations Providers
SpecimenDatabases
CommercialAggregators
Software ToolsOpen Access
Digital Libraries
Indices
Nomenclators
SpecimenDatabases
CommercialAggregators
Software ToolsOpen Access
Digital Libraries
Indices
Nomenclators
Open AccessPublishers
International Collaborative Projects
Lessons Learned
• Biblio/Drupal data model insufficient for mass of data envisioned for all biodiversity, too flat and difficult to expand in collaboration with Biblio development community
• Data providers want their content findable and managed in the Biodiversity Heritage Library, not a system alongside BHL
• Maintaining two platforms for biodiversity literature threatens sustainability of the literature resources over the longer term
Citations, Articles and Chapters in BHL
Global Names Architecture
Support citation reconciliation
.
.
.
.
.
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.L. Sp. Pl. 2: 971. 1753
Linneaus, C. Species Plantarum, vol. 2 p. 971. 1753
Linné, Carl von. Sp. Pl. Vol. 2 Page 971. 1753
Caroli Linnaei, Species Plantarum exhibentes plantas rite cognitas, ad genera relatas, cum Differentis Specificis, Nominibus Trivialibus, Synonymis Selectis, Locis Natalibus, secundum SYSTEMA SEXUALE digestas.. 2:971. 1753
Zea mays
Where are we?
• Articles– Extend BHL data model to store article metadata– Build process to harvest data from BioStor
• Create user interfaces for adding article metadata and associated files– Define functional requirements as improvements to Drupal-based
Citebank– Define process flow for adding article metadata and associated
files– Implement UI changes
• Change BHL UI to accommodate article search• Change BHL UI to accommodate article display (TOC)
What is needed for a citation repository?
Admin. Interface– IMPORT AND MAPPING TOOL• Preview/Accept/Reject/Undo/Report on Import• No standard schema, MODS or Bibtex• Drag & drop GUI or mapped source and target field config.
– USER MANAGEMENT• Self-Registration• Admin. Approval & Deletion• User Roles Assignment
– GLOBAL UPDATES
What is needed for a citation repository?
General User Interface– IMPORT• Upload/Preview/Accept/Reject/Undo/Report on Import
– CREATE CITATION• By filling a Form, via BibTex
– BROWSE• Faceted: title,author,subject, year, contributor, my citations
What is needed for a citation repository?
• CITATION TYPES– Journal Article, Book Chapter, Conference Proceedings,
Conference Paper, Thesis, Government Report, Note, etc.
• OAI HARVESTING– Harvest and serve data through OAI-PMH
• SPECIFICATIONS FOR DATA PROVIDERS PAGE
• CONTRIBUTORS PAGE– Recognize ALL contributions
• REPORTING– Statistics Page by Citation and Publication type– Recent/Latest Uploads
Where are we going?
• Integrate BHL’s Services with ZooBank
• Authoritative list of titles in common use for nomenclatural acts (“TL3”)
• Harvest relevant content from Mendeley
• Integrate services and interfaces with the GNUB data model
• Interoperate with citation parsing tools & services
Thank you
[email protected] Data AnalystArt of Life Project CoordinatorMissouri Botanical Garden
2012 Annual TDWG MeetingBeijing, ChinaOctober 21st, 2012
[email protected] BHL Project ManagerBHL Technical DirectorMissouri Botanical Garden