TEESDALE U3A G ROUP - Five Nine Genealogy.pdf · Family Tree DNA (adoption, deep ancestry, full...
Transcript of TEESDALE U3A G ROUP - Five Nine Genealogy.pdf · Family Tree DNA (adoption, deep ancestry, full...
TEESDALE U3A GENEALOGY GROUP
An Introduction to Genetic Genealogy
GENETIC GENEALOGY
What can genetic genealogy do for you ?
Richard III identification?
Find unknown cousins? YES Provided they have also had a genealogical test
Prove/disprove a relationship? YES, YES, YES
Provided they have also had a genealogical test
Or
You can persuade them to have a test
Or
They decide to have a test
Deep ancestry (ethnic origins) YES
Avoid all that time consuming traditional research? NO
BASIC BIOLOGY
The Genome – 23 pairs of chromosomes define a human body
Every cell in that body contains those 23 pairs except
-The female egg
-The male sperm
Each chromosome consists of a long DNA molecule
GENETIC GENEALOGY
The Animated Genome from Unlocking Life's
Code
Deoxyribonucleic acid – DNA
The famous double helix
Straightened out it can be
represented by a sequence
of four letters
CATCCGACTGA….
Duplicated into every cell
of our body
Occasional errors in
duplication – mutations
GENETIC GENEALOGY
If the mutation is in the germ cell (ie egg or
sperm) then it is passed to the child and
duplicated in the DNA of every cell of the child
and passed from the child to the child’s
descendants and from them to their descendants
and so on.
Genetic analysis can identify the mutations. Two
types of mutations are analysed for genetic
genealogy purposes – SNPs and STRs.
DNA MUTATIONS – SNPS
Single-nucleotide polymorphism - SNP
DNA MUTATIONS – STRS
Short Tandem Repeat - STR
GENETIC GENEALOGY
In practice mutations (those now identified) usually only occur only
every few generations. Genetic testing looks for these mutations and
the pattern of the mutations.
GENETIC GENEALOGY
Learn.Genetics – The Four Types of DNA –
Autosomal DNA
Y-DNA
mtDNA
X-DNA
LOST ANCESTORS
Luke Jostins -
Each generation we go back is expected to halve
the amount of autosomal genetic material an
ancestor gives to you.
As this material inherited in chunks, we only
have to go back ~9 generations until it is quite
likely that a specific ancestor contributed zero of
your autosomal material to you
What does he mean by ‘quite likely’?
HOW MANY ANCESTORS?
Generation
s
Ancestors Date
1 2 parents 1920
2 4 grandparents 1890
3 8 1860
4 16 1830
5 32 1800
6 64 1770
7 128 1740
8 256 1710
9 512 1680
10 1024 1650
11 2048 1620
12 4096 1590
13 8192 1560
LOST ANCESTORS
11 generations
Gen. Mean
%
%
with
zero
1 50 0
2 25 0
3 13 0
4 6.3 0
5 3.1 0
6 1.6 0
7 0.78 4.7
8 0.39 14
9 0.2 32
10 0.098 54
11 0.049 71
GENETIC GENEALOGY
GENETIC GENEALOGY
In practice mutations (as yet now identified) usually only occur only
every few generations. Genetic testing looks for these mutations and
the patern of mutations.
Genetic distance is the number of mutations separating individuals.
DNA MUTATIONS – SNPS
Single-nucleotide polymorphism - SNP
DNA MUTATIONS – STRS
Short Tandem Repeat - STR
GENETIC GENEALOGY
Haplotype
effectively the set of STR markers
relatively frequent mutations
historical timescale
Only analysed for Y-DNA
Haplogroup
effectively the set of SNP markers
Infrequent mutations
Pre-history timescale – Deep Ancestry
Clades – sub-groups within the haplogroup
GENETIC GENEALOGY - HAPLOTYPE
Early Y-DNA tests looked at 12 STR markers
FT-DNA now offer 37, 67 and 111 marker tests
Swindle project
GENETIC GENEALOGY
ANCESTRAL EVE (MTDNA)
Mitochondrial Eve - 100,000 – 200, 000 years ago
Y-chromosomal Adam – 180,000 – 580, 000 years ago
GENETIC GENEALOGY – HAPLOGROUPS
More detailed image
GENETIC GENEALOGY – HAPLOGROUPS
GENETIC GENEALOGY
– HAPLOGROUPS AND CLADES
DNA TESTING KIT
Cheek swab - FTDNA Saliva tube - Ancestry
Same for atuosomal DNA, Y-DNA and mtDNA
GENETIC GENEALOGY
Order (and pay for!) the kit.
When kit arrives by post then provide the sample and complete the identification process.
Return the kit to the analysis company (by post).
Wait for the analysis process to complete – 6-8 weeks.
Analysis company will contact you with the results and a list of matches (potential relatives) and contact details (from their database)
You decide, on the basis of conventional genealogy, which of the potential relatives to contact – they may contact you
As more people take the test you will be notified of new matches
You can usually transfer the results to other companies or open-source databases – or retest.
GENEALOGICAL TESTING COMPANIES
(NOT PATERNITY TESTING) 23andMe (adoption, deep ancestry, ethnicity, genealogy, health)
African Ancestry (deep ancestry)
AfricanDNA (FTDNA affiliate) (deep ancestry, ethnicity, genealogy)
AncestrybyDNA (deep ancestry, ethnicity)
AncestryDNA, a subsidiary of Ancestry.com (adoption, ethnicity, genealogy)
BritainsDNA (formerly Ethnoancestry) (deep ancestry, ethnicity)
CymruDNAWales - see BritainsDNA
DNA Ancestry and Family Origin (FTDNA affiliate in the Middle East) (adoption, deep ancestry, full mtDNA sequencing, genealogy)
DNA Consultants (deep ancestry, ethnicity)
DNA Spectrum (ethnicity)
DNA Tribes (ethnicity)
DNA Worldwide (FTDNA partner (deep ancestry, ethnicity, genealogy, paternity, relationship)
Ethnoancestry - see BritainsDNA
Family Tree DNA (adoption, deep ancestry, full mtDNA sequencing, genealogy, identity, relationship, Y chromosome sequencing)
Full Genomes Corporation (whole genome sequencing, Y-chromosome sequencing)
Futura Genetics (health)
Gene by Gene - the parent company of Family Tree DNA which now incorporates the companies previously known as DNA Traits, DNA DTC and DNA Findings (research, health, exome sequencing, whole genome sequencing)
Genebase (deep ancestry, genealogy)
Genographic Project (deep ancestry, ethnicity)
iGENEA (FTDNA affiliate) (deep ancestry, genealogy)
IrelandsDNA - See BritainsDNA (formerly Ethnoancestry)
MyDNA Global - a new name for BritainsDNA
Oxford Ancestors (deep ancestry, genealogy)
Roots for Real (deep ancestry, ethnicity, genealogy)
ScotlandsDNA - (formerly Ethnoancestry) (deep ancestry, ethnicity)
Sorenson Genomics (laboratory services)
Sure Genomics (whole genome sequencing)
Centrillion Biosciences (aka TribeCode) (deep ancestry, ethnicity)
YorkshiresDNA - See BritainsDNA (formerly Ethnoancestry)
YSEQ (custom Y-SNPs, Y-STRs, SNP panels)
GENEALOGICAL TESTING ORGANISATIONS
(NOT PATERNITY TESTING)
FTDNA
Y-STR 37 marker $169, 67 marker $268, 111 marker $359
Big Y – SNP $575
Autosomal (Family Finder) $99
mtDNA mtDNA Plus $69, mtFull Sequence $199
Ancestry
Autosomal £99
The Genographic Project (National Geographic) Autosomal – deep ancestry $150
23andMe - autosomal £125 – Genetic Health Factors inc. p&p
BritainsDNA (Chromo2) £250 Y-DNA, mtDNA and autosomal - Beware
http://isogg.org/wiki/Autosomal_DNA_testing_comparison_chart
GENETIC GENEALOGY - LINKS
Beginners Guide to Genetic Genealogy -Wheaton
Surname Resources
The Animated Genome from Unlocking Life's
Code
Contexo – DNA Basics
Journey of Man Interactive Map
cruwys.blogspot.co.uk
Learn.Genetics (University of Utah)
GENETIC GENEALOGY - DEFINITIONS
Allele: One of the variant forms of a gene at a particular locus, or location, on a chromosome. Different alleles produce variation in inherited characteristics. For STR markers, each allele is the number of repeats of the short base sequence.
Base Pair: Two bases that form a "rung of the DNA ladder." A DNA nucleotide is made of a molecule of sugar, a molecule of phosphoric acid, and a molecule called a base. The bases are the "letters" that spell out the genetic code. In DNA, the code letters are A, T, G, and C, which stand for the chemicals adenine, thymine, guanine, and cytosine, respectively. In base pairing, adenine always pairs with thymine, and guanine always pairs with cytosine.
Chromosome: One of the threadlike "packages" of genes and other DNA in the nucleus of a cell.
Centimorgan: The centiMorgan is equal to a 1% chance that a marker at one genetic locus on a chromosome will be separated from a marker at a second locus due to crossing over in a single generation.
DNA: The chemical inside the nucleus of a cell that carries the genetic instructions for making living organisms.
DYS#: D=DNA, Y=Y chromosome, S=a unique DNA segment. A label for genetic markers on the Y chromosome. Each marker is designated by a number, according to international conventions. At present, virtually all the DYS designations are given to STR markers (a class often used in genetic genealogy).
Gene: The functional and physical unit of heredity passed from parent to offspring. Genes are pieces of DNA, and most genes contain the information for making a specific protein.
Genome: All the DNA contained in an organism or a cell, which includes both the chromosomes within the nucleus and the DNA in mitochondria.
GENETIC GENEALOGY - DEFINITIONS
Locus: A point in the genome, identified by a marker, which can be mapped by some means. It does not necessarily correspond to a gene. A single gene may have several loci within it (each defined by different markers) and these markers may be separated in genetic or physical mapping experiments. In such cases, it is useful to define these different loci, but normally the gene name should be used to designate the gene itself, as this usually will convey the most information.
Marker: Also known as a genetic marker, a segment of DNA with an identifiable physical location on a chromosome whose inheritance can be followed. A marker can be a gene, or it can be some section of DNA with no known function. Because DNA segments that lie near each other on a chromosome tend to be inherited together, markers are often used as indirect ways of tracking the inheritance pattern of genes that have not yet been identified, but whose approximate locations are known.
Microsatellite: Repetitive stretches of short sequences of DNA used as genetic markers to track inheritance in families.
Mutation: A permanent structural alteration in DNA.
Short Tandem Repeats (STR): A genetic marker consisting of multiple copies of an identical DNA sequence arranged in direct succession in a particular region of a chromosome. Occasionally, one will mutate by the gain or loss of one repeat. (Also known as microsatellite)
A MEDICAL APPLICATION
– FROM TODAY’S NEWS (7 JULY 2016)
Inherited genes ‘have more prominent role in
prostate cancer’
Gene BRCA2 – codes for a repair protein.
12% of men with advanced prostate cancer have
defective genes – 5% BRCA2, 7% other
1 in 8 men will get prostate cancer
RICHARD III IDENTIFICATION
http://www.le.ac.uk/richardiii/science/resultsofdna.html
RICHARD III IDENTIFICATION
1) Richard III was killed, aged 32, at the Battle of Bosworth, on the 22nd of August 1485, and after the battle he was brought back to Leicester and buried in the choir of the church of the Grey Friars in Leicester.
2) A contemporary account speaks of him having one shoulder higher than the other. In 2012, we excavated the remains of a male, aged 30-34, with multiple battle injuries and severe scoliosis.
3) Radiocarbon and stable isotope analysis showed that the remains dated from the right period and that this person had a high-status diet.
4) Finally, DNA analysis of mitochondrial DNA from the skeletal remains showed a match with two living female-line relatives.
5) While the Y chromosome analysis did not show a match, this is not particularly surprising given that we know that false-paternity can occur.
37 marker match Genetic Distance 4
Donald Matthew McDonald
25 marker matches (42 results)
GD Name Most distant
ancestor
Haplotype Match
date
1 McDonald (Ireland) R-M269 7/6/2015
2 Larry Dunnaway John Dunaway R-M269
6/20/2016
2 Stephen Edward
Dennis
James Dennis
b1802
R-M269
5/19/2016
2 Mark Dunham Deacon John Dunham
b1588
R-M269
2/21/2016
2 John Mason Lee John Lee b 1755 R-M269 2/9/2016
•12 Marker matches - nil
SWINDLE (SWINDELL)Y-DNA PROJECT
Seven members of the project almost certainly belong
to the same genetic family.
Four of these are an exact match on the tested DNA
markers and the other three have strong similarities.
Four are of American descent from the Swindells of Hyde
County, North Carolina (almost certainly descended from
the Thomas Swindall who settled in North America
around 1650).
Three of these are an exact match to a Swindells who was
born in England and whose ancestry can be traced back to
Cheshire in the 18th century.
Of the three with some haplotype differences, one line is
descended from a Swindells in County Fermanagh, Ireland,
one from a Swindell in Derby, England and the third from
the Hyde County Swindells.
SWINDLE (SWINDELL) Y-DNA PROJECT
Two more members of the project are a close genetic match to each other but of distinctly different genetic family from the group above. One ancestral line goes directly back to the Timothy Swindall who settled on North America about 1675 and the other to a James Swindle who was born about 1801 in North Carolina. It is difficult to be certain about James’ ancestry from the conventional genealogical evidence but the DNA evidence says that he must also be a descendant of Timothy Swindall.
A third line is descended from Tinker Swindell, an African slave in Columbus County, North Carolina at the beginning of the 19th century.
Another definitely unrelated line is said to originate from Germany but I have been unable to trace this line as yet.
And finally, my own genetic Swindle family commences with Joseph Swindale who was the illegitimate son of Sarah Swindle, baptised in 1821 in Northumberland, England. Through his mother I can trace my ancestry back to Richard Swindell who would have been born before 1650 and lived near Hexham in Northumberland.