SISMER SISMER Systèmes d’Informations Scientifiques pour la Mer French NODC Contribution to IODE...
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SISMERSISMER Systèmes d’Informations Scientifiques pour la Mer
French NODC
Contribution to IODE and New Perspectivesin the frame of the Operational Oceanography
prepared by Catherine MAILLARD1997-2000
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Summary of the presentation
Context and History National Oceanographic Data Bank Projects Quality Assurance New developments for Real Time Data
Management Human Support and Facilities Conclusion, Perspectives, New Challenges for
Data Management
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IFREMER
IFREMER (the French Institute of Research and Exploitation of the Sea), a public institute of industrial and commercial nature, created by a decree of 5 June 1984, is the only French body with an exclusively maritime vocation.
It is placed under the joint authority of the Ministries of Research and Technology, of Fisheries and Equipment and Transport.
Annual budget : one billion French Francs, 1700 executives, researchers, engineers, seamen, technicians
and administrative staff, 72 laboratories and research departments, located in 24 stations
and centres along the metropolitan coast and overseas, 7 vessels, 2 manned submersibles, equipped with scientific
instruments.
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History of the Data Centre
SISMER (Systèmes d'Informations Scientifiques pour la Mer) was created in 1990, and since 1997 belongs to the Informatics and Marine Data Department (IDM) of IFREMER, the main French government research agency devoted to ocean research and exploitation.
SISMER is the Designated National Oceanographic Data Centre for France (French NODC) for the International Oceanographic Data Exchange programme (IODE) of UNESCO Intergovernmental Oceanographic Commission, following the former Bureau National des Données Océaniques (BNDO). This national data banking activity dates from 1968, and covers the fields of marine physics, chemical, underway geophysics and general information on French oceanographic cruises and data sets.
SISMER contributes to data management structures of several national and international scientific projects, especially in the frame of the European MAST programme.
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IFREMER IDM Department and Facilities Brest Services
RIC : network, archiving system and centralised facilities ISIB : information system engineering in Brest SISMER : data centre COM : Oceano-meteo services
Centralised Facilities in Brest Brest centre mainframe - RDBS & WWW servers Central archiving backup system Network Administration RDBS + GIS Software Administration
Distributed Facilies SUN UNIX Work stations DOS personal computers + Office software Software : MATLAB, Expert QC software, Loading/Extracting Data
CDROM engraving
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MISSIONS
to design and operate scientific information systems and databases in the domain of the sea;
sets the standards of quality to be respected for data storage;
maintains an inventory of information systems and databases, the responsible scientists and rules for their availability;
represents IFREMER within national and international authorities concerned with the management of sea data;
provides training and transfer of knowledge within its field of competence.
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National Data Banks and Projects
Catalogues - Meta-Databases MAST-EURONODIM - European cooperative network for oceanographic data &
information management
Geophysical Data Bank DORSALES/RIDGE
Physical and Chemical Data Bank MAST-MEDAR/MEDATLAS II MAST-MTP II/MATER MAST-OCTOPUS - Tomographie Acoustique MAST-ROBLINKS - Propagation Acoustique
Related with the (Pre-)Operational Oceanography TOGA/WOCE/CLIVAR/GTSPP MAST-MFSPP- Mediterranean Forecasting System MAREL CORIOLIS
Reference Data - Data Products from other data centres
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MEDI/EDMED Data sets Summaries
Data sets dispersed in the French scientific community
236 data sets summaries from 86 laboratories or centres
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National Geophysical Data Bank
Vertical Bathymetry : 353 Cruises Multibeam Bathymetry : 278 Cruises Gravity : 213 Cruises Magnetism : 256 Cruises imagery : 64 Cruises
Related Project : DORSALES-RIDGE
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DORSALES-RIDGE
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National Physical and Chemical Data Bank
CTD 17 005 + 2008 LR
Bottle Casts 36 026 Current Meter Time Series 1893 Thermistor Chain Time Series 131
Related Projects : MEDAR/MEDATLAS, MATER, OCTOPUS, ROBLINKS
0
500
1000
1500
2000
2500
Bouteilles
CTD
CourantosBo
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MTPII-MATERMAss Transfer and Ecosystem Response(MAS3-CT96-0051)
Physics
VERTICAL PROFILES TIME SERIES
3013 CTD CTD TIME SERIE
572 XBT 21 THERMISTOR STRING
461 ADCP VERTICAL PROFILES 110 CURRENT METER
LAGRANGIAN FLOAT
Biochemistry
VERTICAL PROFILES TIME SERIES
1473 BOTTLES STATIONS 37 SEDIMENT TRAPS
269 BIOLOGICAL STATIONS
Other parameters :
meteorology, biology, model outputs
3 Regional Data Centres and an Animation Task
105 Oceanographic Cruises
126 Moorings
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MAST- MEDAR/MEDATLASIIMediterranean Data Archaeology and Rescue of Temperature, Salinity and Bio-chemical Parameters
Collaborations and Scientific Advisers : GODAR Project - WDC-A, NODC-Croatia, DNA Tunisia, DNA Georgia
EUROGOOS, MEDGOOS, IODE Network
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MEDAR/MEDATLAS II OBJECTIVES AND METHODOLOGY
1. to complete the data-void areas in the Eastern and Southern parts of the Mediterranean Sea and Black Sea with new observations, through a wide co-operation of the Mediterranean countries; the core parameters identified as necessary to archive for the ecosystem following up and modelling are :
2. to make available comparable and compatible data sets of temperature, salinity and bio-chemical profiles issuing from different sources, by using a common protocol for formatting and quality checking based on the available preliminary knowledge of the core parameters distribution and the internationally agreed standards;
3. to prepare value added products including climatological gridded statistics and maps that will be useful for the understanding and modelling of the Mediterranean and Black Sea by using efficient and robust objective analysis techniques;
4. to extend the protocol for data qualification to each stage of the data processing;5. to facilitate the access to the archived data and enhance the data for various scientific,
educational, industrial and environmental needs, through electronic publishing on widely disseminated media and promotion.
Temperature Salinity Oxygen Nitrate Phosphate Alkalinity Nitrite Total P pH Ammonia Silicate H2S Total Nitrogen Chlorophyll-a
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MFSPPMediterranean Forecasting Pilot Project (MAS3-CT98-0171)
1784 Xbt
Model predictions with Assimilation of RT in situ data from VOS, from multidisciplinary mooring in Aegean Sea, satellite and meteorological data
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Loading and Extraction Tools
ON LINE Data Extraction Input interface
+ dedicated software for automatic file indexation
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Publication Tools
Automatic edition of WWW Catalogues from RDBS : htql
Paperprint catalogues and Mailing Data products on Cdrom
data selection through several criterions including geographical areas
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Data Dissemination
170 data request served by year about 100 information request by year Cruise catalogue and WWW server : about 200 hit /day
Customers : IFREMER 25% French public organisms (out of IFREMER) 40% private firms 5% Foreign organisms 30%
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COASTAL MONITORING - MAREL
RT data freely available on WWW :•Seine estuary and offshore•Brest Bay•South-east Mediterranean coast (in development)
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Global Subsurface Data Centre TOGA/WOCE/CLIVAR/GTSPP
French Component of International Data structures ARGO CLIVAR/GTSPP CORIOLIS/ARGO , MFSPP
623 548 profiles of temperature 1985-1998 (2000) - Mirror site with US-NODC/WDC-A + 1784 from MFSPP
Automatic and Visual QC WWW Interface to access data
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CORIOLIS data center functions
Interopérability with argo
data basecatalogue - archive
gts
mailmailing lists
webfavorite medium
controldata quality control
technical monitoring of equipments
collectionmailinternetgtscd-rompaper...
disseminationpublic / private
productsgraphics and charts
statisticsanalyses
cd-romor other support
on request
quality insurance for exploitation hardware & software management - backup
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Real Time T & TS profiles from PROVOR floats 448
Xbt & CTD from RV 284
argos
argos
argos
CORIOLIS RT Data
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PROVOR Profiler data & products availability
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Reference Data
Gridded Climatologies ... (Levitus, MODB, MEDATLAS, Atlantique T. Reynaud)
Topographic Data(ETOP5, TOPO_2mn, Gravi_2mn, traits de cote, IGN)
Tide Predictions - SHOM Data products on CDroms & diskettes
received at SISMER Dissemination on Internet or Intranet
depending on copyright
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FORMATS
Meta-data : RDBS Small-medium size files :
autodescriptive ASCII (MEDATLAS) Large volume files : NetCDF
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Quality Assurance
QC0 : Check the format and the completeness of the informationQC1 : Check the location and dateQC2 : Check the data points
References - Standards CIEM-Marine Data Management working Group (CIEM) UNESCO/COI/IODE : International Oceanographic Data & Information Exchange
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QC1 Control of the location and Date - Data collected in station
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QC1: Control of the location and Date - Time series on fixed mooring
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QC2 - Control of the Data points
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Current Objectives of Data Management
to insure perennial safeguarding, access and promotion of the national data holdings
to make available long time series of coherent and comparable observations of the same type
to contribute to a better exploitation of the oceanographic work among scientific, engineering educational and decision maker community
to have access to foreign data sets through data exchange
to assist the scientists in preparing projects
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New Needs & Challenges
FURTHER NEEDS EXPRESSED BY THE USERS Access to multidisciplinary data, especially biochemical data Archives of large volumes Real time or near RT data
Convince the scientists to decrease the time lag between data collection and data submission to data centres - avoid to the data to become archaeological
Quality data to get compatibility and comparability within long times series
Preparation of data products : gridded fields, thematic databases ... DATA MANAGERS SHOULD IMPROVE THEIR EXPERTISE
for automatic data collection, Data Centres should take in charge part of the scientific validation
to prepare value added products easy to process by non-specialists NEED FOR INTERNATIONAL COOPERATION
to get information on data availability to establish and develop standards - Reference Manuals to share the tasks during international projects