Sequence of the dog immunoglobulin alpha and epsilon constant region genes
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Transcript of Sequence of the dog immunoglobulin alpha and epsilon constant region genes
Immunogenetics (1995) 41:282-286 © Springer-Verlag 1995
Mayuri Patel • Douglas Selinger • George E. Mark Gerard J. Hickey • Gregory F. Hollis
Sequence of the dog immunoglobulin alpha and epsilon constant region genes
Received: 2 November 1994 / Revised: 10 January 1995
Abstract The immunoglobulin alpha (IGHAC) and epsi- lon (IGHEC) germline constant region genes were isolated from a dog liver genomic DNA library. Sequence analysis indicates that the dog IGHEC gene is encoded by four exons spread out over 1_7 kilobases (kb). The IGHAC sequence encompasses 1.5 kb and includes all three con- stant region coding exons. The complete exon/intron sequence of these genes is described.
Introduction
Immunoglobulin (Ig) proteins consist of two identical light (L) chains and two identical heavy (H) chains. Both Ig L and H chains contain an amino-terminal variable region of approximately 110 amino acids, which forms the antigen binding domain. The carboxy terminal constant (C) region domains of each chain is defined by two isotypes of IgL chain (kappa and lambda) and multiple isotypes of IgH chains (mu, delta, gamma, epsilon, and alpha, which define IgM, IgD, IgG, IgE, and IgA, respectively). The IgH chain C regions contain the effector functions common to anti- bodies of a given isotype (for review see Honjo 1983).
Substantial variations in the quantities of specific IgH chain isotypes are observed when different tissue fluids are
analyzed. For instance, IgA is the primary Ig isotype in mucosal fluids, but is found at low levels in serum. The preponderance of IgA found at mucosal sites reflects the critical role IgA provides as a first line of defense against pathogens invading epithelial surfaces (Delacroix et al. 1982; Underdown and Schiff 1986).
IgE antibodies are responsible for mediating allergic responses (Ishisizaka and Ishizaka 1978). IgE binds to mast cells and basophils through an Fce receptor and, when cross-linked by bound antigen, triggers a cascade of events that leads to the release of allergic mediators. Because of the central role that IgE plays in mediating allergic reactions, the region of the Iga constant region involved in Fce receptor binding is of great interest. Inhibition of binding of IgE to its receptor on mast cells may be a way to control allergic responses. Interestingly, of all five isotypes of immunoglobulin, the sequence of the IgE C region is the least well conserved across species. Conse- quently, studies of allergic reactions in a specific species are aided by having the primary amino acid sequence available for the IGHEC gene of that species.
We are interested in studying and modulating mucosal and allergic immune responses in the dog_ As a step toward that goal, we initiated studies designed to clone and sequence the dog IGHAC and IGHEC genes.
The nucleotide sequence data reported in this paper have been submitted to the GenBank nucleotide sequence database and have been assigned the accession numbers L 36871 (dog IGHAC) and L 36872 (dog IGHEC)
M. Patel • D. Selinger • G. E. Mark • G. E Hollis a (~) Department of Cellular and Molecular Biology, Merck Research Laboratories, R80Y-160, R O. Box 2000, Rahway, NJ 07065, USA
G. J. Hickey Department of Animal Drug Evaluation, Merck Research Laboratories, Rahway, NJ 07065, USA
Present address: i DuPont Merck Pharmaceutical Co., Experimental Station, E 400/5207, RO. Box 80400, Wilmington, DE 19880-0400, USA
Materials and methods
Genomic cloning
A dog liver genomic DNA bacteriophage library was purchased from ClonTech Inc. and 1 x 10e individual plaques were screened with a 4.3 kilobase (kb) XhoI-EcoRI fragment containing the entire human IGHAC1 gene (Max et al. 1982) as described previously (Hieter et al. 1981). Filters were hybridized overnight at 42 °C in a 10% dextran sulfate, 4 x standard sodium citrate (SSC), 50% formamide, and 0.8% Denhardt's Tris buffered solution. After hybridization, filters were washed with 2 x SSC, 0.1% sodium dodecyl sulfate (SDS) at room temperature for 30 min, 1 x SSC, 0.1% SDS at room temperature for 30 min and 1 x SSC, 0.1% SDS at 42 °C for 30 rain. Five positive bacteriophage were plaque purified, and large-scale lysates were prepared. Restriction digestions of positive bacteriophage clones
M. Patel et al.: Dog IGHAC and IGHEC sequences 283
10 30 50
1 AGT GAC C TAGC GT GTCAT T C T C4~C C CAGGT CTC GGCATAT GAAC TC~-ATGAC C TT GGGC T 60
610 630 650
601 GGC T GAC-C T CC CAGCAAGT GGC CAAGGTGGGGC C T C CA/GAAGGACC TGGAGGGT GGCAG 660
70 90 ii0
61 GTCACT GAC CATC TC TATGCAGTTTCC TCTAGT GCAAAGAAAAAATAGC CCTCAC CC T~C 120
670 690 710
661 ~GGCAC-GCAGAGGGTGCACACTGAC CTGTTCC~ATC T ~TCTCTC TC TC TC TCT C T 720
121
181
130 150 170
CTGTGAGGCCATGTAAGGGGTCCAGA~CTGC~CCAC~%GCTCACAGAGTGTCCT~T
190 210 230
GTUAC.AGAGTCC.~AAACCAGCCCCAGTGTGTTCCCGCTGAGCCTCTGCCA~CAGC-AGTCA XXSerLysThrSerProSerValPheProLeuSerLeuCysHiaGlnGluSer
180
240
250 270 290
241 G~AGGGTACGTGGTCATCGGCTGCCTGGTGCAGGGATTCTTCCCACCGGAGCCTGTGAAC 300 GluGlyTyrValValIleGlyCysLeuValGlnGlyPhePheProProGluProValAsn
730 750 770
721 CTCTCTCTGCTCCTGAA~TAACAGTCATCCGTGTCATCCATGTCCCTCGTGCAATGAGC spA~nSerHisPraCysHisSroCysProSerCysA~n~luP l i
790 810 830
781 CCCGCCTGTCACTACAGAAGCCAGCCCTCGAGGATCTGCTTTTAGGCTCCAATGCCAGCC r~krgLeuSerLeuGlnLysProAlaLeuGluAapLeuLeULeuGlySerAaDAlaSerL
850 870 890
841 TCACATGC_ACACTC~GTGGCCTGAAAGACCCCAAGGGTGCCACCTTCACCTGGAACCCCT euThrCysThrLeuSerGlyLeuLy~A~pProLy~GlyAlaThrPheThrTrpA~nProS
780
840
900
310 330 350
301 GTGACCTGGAATC-CCGGC-AAGGACAGCACATCTGTCAAGAACTTCCCCCCCATGAAGGCT 360 ValThrTrpAsnAlaSlyLysA~pSerThrSerValLysAsnPheProProMetLysAla 901
910 930 950
CCAAAGGGAAGGAACCCATCCAGAAGAATCCTGAGCGTGACTCCTGTGGCTGCTACAGTG erLysGlyLysG1uProIieGlnLy~A~nProGluArgl~pSerCysGlyCysTyrSerV
960
370 390 410
361 GCTACCG6AAGCCTATACACCATGAGCAGCCAGTTGACCCTGCCAGCCGCCCAGTGCCCT 420 Al~ThrG!yS~rLe~TyrThrM~Sar5erGlnL~uThrLeuProAlaAlaGlnCysPro
961
970 990 i010
TGTCCAGTGTCCTACCAGGCTGTGCTGATCCATGGAACCATGGGGACACCTTCTCCTGCA alSerSerValLeuProGlyCysAlaAspProTrp]ksn~i~GlyAspThrPheSerCysT
1020
421
430 450 470
GATGACTCGTCTGTGAAATGCCAAGTGCAGCATGCTTCCAGCCCCAGCAAGGCAGTGTCT AspAspSerSerValLysCysG!nValGl~HisAlaSerSerProSerLysAiaValSer
4~C 1021
1030 1050 1070
CAGCCACCCACCCTGAATCCAAGAGCCCGATCACTGTCAGCATCACCAAAACCACAGGTG hrAiaThrH!sProG/uSerLysSerProIleThrValSerIleThrLysThrThrG
1080
481
490 510 530
GTGCCCTGCAAAGGTCAGAGGGCAGGCTGGGGAGC~GGC-AGGGGCCCCACATCCTCACTCT ValProCymLysA
540 1081
1090 III0 1130
GC4: CCAGACC CTGC C C GT GAGGCACT GC TT GGCACACAAAAGT TT GT GAGGCAA~ T C ~TA 1140
541
550 570 590
GAC CCTCCACT TGGAGTTC TGGC CC ~CACTC CAC GGGGAGGACAGT GGC-C TGCT G 600
1150 1170 1190
1141 AGC CT GC TT C C TTCCTCTAGC C CC TGGGC TTGGGTGCTCCCAC CCACAT TTTACAAAGGG 1200
1270 1290 1310
1261 TGGCTCTCT GTCC TGCAGAGCACATC C CGC CCC.AGGTCCAC CTGC TGCC GCCGCCGTCGG lu~is~leProProGlnValHisLeULauProProProSerG
1330 1350 1370
1321 AAGAGC T GGC C C T CAATGAGC T GGT GACAE TGAC G T GeT T GGTGAGGGGCTT CAAAC CAK luGluLeuAlaLeua~nGluLeuValThrLeuThrCy~LeuValAxgGlyPheLysProL
1390 1410 1430
1381 AAGATGT GC TC GTA: OAT GGC T GCAAGGGAC C CAGGAGC TAC C C CAAGAGAAG TAC T TGA y~AspV al Le uValAr gTrpLeuGl nGl yThr G1 nGIUL euP roGlnGl uLys Ty r LeuT
145D 1470 1490
1441 C CT GGGAGC C C C T GAAGGASC C TGAC CAGA CCAACATGT TT C~ C G T GAC CAGCAT GC T GA hrTrpOluPr oLeuLysGluPr oAspGlnTh/AsnMe t PheAlaValThzs erMe tLeUA
1510 1530 1550
1501 GGGTGACAGC C C~kGACT ~ A A G T T CT CC TC~.ATGGT GGGC CAC G~mG r gValThrAlaGluAapTrpLys GlnGIyGIULy3 PheSerCysMetValG!yHi sGluA
1320
1330
1440
1500
1560
1210 1230 1250
1201 AAACTGT GGCATGGGGTGCTAT ~GAAGGCTC TTC CC CCAC CC CAGATC CC TGAC C 12_60
Fig. 1 Sequence of the dog IGHAC gene. The complete nucleotide and predicted amino acid sequence for dog IGHAC germline gene including exon and intron sequences. PolyA addition signal indicated by an underline. Hinge region at beginning of CH2 is marked by vertical lines
were performed according to the manufacturer's suggested conditions, with the restriction enzymes indicated. Regions of the clones contain- ing the dog IGHAC and IGHEC regions were identified using the human IGHAC1 region probe described above and a 2.8 kb BAMHI fragment encoding the human genomic IGHEC region (Max et al. 1982). The DNA fragments containing these dog Ig sequences were subcloned into pBluescript (Stratagene, La Jolla, CA) and are available upon request•
1561
1621
1681
1741
1570 1590 l&10
CTCTGCCCATGTCCTTCACCCAGAAGACCATCGACCGCCTGGCGGGTAAACCCACCCACG 1 lLeu9 rome t S e r pheThrGlr~Ly~Thr IleAspAxgLeuAl aGIyLys p roTbrHisV
1630 1650 1670
T ~KACGT GT ~TGT C~T CATGGC AE~kGGT GGAC GCF_AT ~T GCTAC T AAAc CGCC CAAT C T T alAsnValS erValValMe tAl aGluVa IA~pGI yI i eCy sTyr
1690 1710 1730
CCCTCCC TAAATAAA CT CCATGCTTGC C C ~ C CC GTGCTTC CA/CAGGCCGC CT
1750 1770
GTC T GT CCATAT TC GGGGT C T GT GGCATA C T ~ U , GGGTAGAGC TC 1789
1620
1680
1740
Table 1 Comparison of percent identity of nucleotides and amino acid sequences of dog IGHAC region with human and mouse Ig~ constant region genes and proteins
% Identity of dog IGHAC to IGHAC of other species
CH1 CH2 CH3 Total
59 73 78 71 52 67 73 65 72 74 83 76 57 70 82 70
Mouse Igh-2 (c~) DNA Mouse Igc~ Protein Human IGHACI DNA Human Igcd Protein
284 M. Patel et al.: Dog 1GHAC and IGHEC sequences
NucIeotide sequence analysis
The DNA sequences of the dog IGHAC and IGHEC genes were determined by the dideoxy chain termination method using the US Biochemicals (Cleveland, OH) Sequenase DNA sequencing kit. Syn- thetic oligonucleotides used as sequencing primers were synthesized on an ABI381A synthesizer or purchased from Stratagene. Nucleic acid alignments and translations were done using the University of Wisconsin Sequence analysis software package (Devereux et al. 1984).
Results
Initial genomic Southern blot analysis using probes that encoded the entire human or mouse IGHEC gene failed to detect dog IGHEC sequences under reduced-stringency blot washing conditions (data not shown). Previous work had shown that IGHAC genes are more closely conserved from species to species than IGHEC genes, but are closely linked to the IGHEC sequences (Auffray et al. 1981; Nishida et al. 1981; Flanagan and Rabbitts 1982a, Max et al. 1982; Shimizu et al. 1982). Therefore, a clone containing the dog IGHAC gene may also contain the IGHEC gene. A DNA fragment containing the human IGHAC1 gene was used as a probe to screen a dog genomic liver DNA bacteriophage library to isolate recombinant clones contain- ing the dog IGHAC gene. Five positive bacteriophage clones were identified and plaque purified. Each of these clones was probed with the human IGHACI and IGHEC gene fragments and one of the clones was shown to have sequences that hybridized to both probes. This clone was selected for further characterization.
Sequence analysis demonstrated that the dog IGHAC region gene is encoded in three exons spread over 1.5 kb of DNA (Fig. 1), consistent with the previously reported genomic structure of IGHAC genes from other species (Flanagan et al_ 1984; Osborne et al. 1988; Burnett et al. 1989; Kawamura et al. 1992). Sequence comparisons revealed that the predicted dog IGHAC gene product shares 65% and 70% amino acid identity with mouse and human, respectively, over the entire IGHAC coding region (Table 1)_ The CH3 domain is the most highly conserved, maintaining 78% (with mouse) and 83% (with human) amino acid identity. The hinge region of the dog IGHAC gene is fused to the 5' end of the CH2 domain and is 10 amino acids long. A consensus polyA addition signal is located 20 base pairs (bp) downstream of the translational termination codon.
Nucleotide sequence analysis indicates that the dog IGHEC gene is encoded by four exons, each of which corresponds to an Ig domain (Fig. 2). Overall, the predicted dog IGHEC gene product shares 49% and 57% amino acid identity with the mouse and human Ige constant region proteins, respectively [(Table 2) (Flannagan and Rabbitts 1982b; Ishida et al. 1982; Liu et al. 1982; Max et al. 1982)]. CH3 is the most conserved (62% in comparison with human) and CH2 is the most dissimilar (53% in compar- ison with human). Eighty-six bp downstream of the transla- tional termination codon is a consensus polyA addition signal.
Discussion
The effector functions of antibodies reside in the IgH chain C regions. The genes encoding the IgH chain isotypes are linked head-to-tail along the mammalian chromosome. In several species studied, the genes encoding the Ig~ and Iga heavy chain isotypes are closely linked (Flanagan and Rabbitts 1982a; Nishida et al. 1981; Max et al. 1982). Our analysis reveals that this organization is also present in the dog genome.
IgA is the principal immunoglobulin of mucosal sur- faces, where it is secreted as a polymeric antibody complex that contains J chain and secretory component (For review see Mestecky et al. 1991). To fully understand antibody- mediated immune responses at mucosal surfaces in a specific species, a knowledge of the IGHAC gene from that species is required.
Unlike other mammalian immunoglobulin genes, the hinge region of the IGHAC gene is not encoded by a separate exon, but is fused to the 5' end of the CH2 domain. This organization of hinge and CH2 is conserved in the dog IGHAC gene. The length of the Igc~ hinge region has been shown to vary. For instance, the human IGHAC1 gene has a hinge region of 18 amino acids, while the human IGHAC2 gene hinge region is only 5 amino acids long (Flanagan et al. 1984). The dog IGHAC gene hinge region is i0 amino acids long, identical in length to the mouse Igc~ hinge region (Auffray et al. 1981; Osborne et al. 1988).
Studies have suggested that the primary interactions between IgA and secretory component reside in the CH2 and CH3 domains of Igo~ constant region (Geneste et al. 1986). Secretory component is covalently linked to IgA through disulfide bonds. Cys 311 of the human Ig~ CH2 domain is responsible for this linkage (Fallgreen et al. 1993). Covalent linkage of dog Iga to secretory compo- nent may also occur at this position because this cysteine residue is conserved in the dog IGa chain.
The IGHEC gene has been cloned from many species including rat, mouse, and man as well as several non- human primates (Flanagan and Rabbitts 1982b; Max et al. 1982; Sakoyama et al. 1987; Kindsvogel et al. 1982). The C region of all functional IGHEC genes characterized to date is encoded in four exons, each containing one Ig domain (CHI-4) . Our analysis of the functional dog IGHEC gene reveals that it also is encoded by four exons, each representing an Ig domain.
The IgE antibody class plays a central role in type I immediate hypersensitivity. IgE binds to specific high- affinity receptors on mast cells and basophils and, when associated with antigen, triggers degranulation of vasoac- tire substances to produce allergic reactions (Ishisizaka and Ishizaka 1978). Because of its role in allergy, a substantial effort has been made to understand how the Ige constant region (which defines IgE) interacts with the Fca receptor on mast cells and basophils to trigger degranulation upon binding antigen (for review see Metzger 1992). These studies indicate that binding to the Fc~ receptor resides in the Ig~ CH3 and CH4 domains (Basu et al. 1993). Addi-
M. Patel et al.: Dog IGHAC and IGHEC sequences
I0 30 50
1 CAGAC~CAGATACCC-AC-GTC-A-ACAGCC~--~=CC%~--GCg~TA%~-'~q~=GC=GTC=~%CAG~CCC~-A~
61
70 90 110
CAGC=CACTGACACTC43CCCTGTCCCCACAGCCACCAGCCAC43ACCTGTCTG~T2CCCCT XA~hrSerGlnAspLeuSerValPheProL
121
130 150 170
TCCCCTCCTGCTGTAAAGACAACATCCCCAGTACCTCTGTTACAC~TCTC43TCA
euAlaSerCysCysLysAspAsnIleAlaSerThrSerValThrLeuGlyCysLeuValT
190 210 230
181 CCGGCTATCTCCCCATGTCGACAACTGTGACCTC~GACACGGGGTCTCTAAATAAGAATG hrGlyTyrLeuProMetSerThrThrValThrTrpAspThrGlySerLeuAsnLysAsnV
241
250 2 7 0 29O
TCACGACCTTCCCCACCACCTTCCACGAGACCTACGGCCTCCACAGCATCGTCAGCCAGG alThrTbrPheProThrThrPheHisGluThrTyrGlyLeuHisserIleValSerGlnV
301
310 330 350
TGACCGCCTCGGGCAAGTGGC42CAAACAGAGG~_ACCTC92AGCGTC~d2TCACC=CTC=AGT alThrAlaSerGlyLysTrpAlaLysGlnArgPheThrCysSerValAlaHisAlaGluS
361
370 390 410
CCACCGCCATCAACAAGACCS~/CAGTC~WAAC42CAGC43~CCACATGACACT erThrAlaIleAsnLysTnrPheSerA
43O 450 470
421 GGAGGGAGAAGGGACAGGCTGGGCGGGAGTGGTAGGAGAGGGGTC43TGGGCGGGCCCGAA
490 510 530
481 TGCCC42CAq~oCTGGTAACGCCCAC~_ACATG~TGGGGCTGACACATC=AGTCCCGT
550 57O 590
541 GGGC TCAGA;ACACCA~CACATGGCIC~CTCTACTrCTAGCATGTCCC TTAAAC T~
laCysAlaLeuAsnPhe
610 630 650
601 ATI~CCCCTACCGTGAAGCTCTTCCACTCCTCCIDCAACCCCGTCGGTGATACCCACACC IleProProThrValLysLeuPheHisSerSerCysAsnProValGlyAspThrHisThr
661
670 690 710
ACCATCCAGCTCCTGTGCCTCATCTCTGGCTACGTCCCAC~TGACATC~AGGTCATCTGG ThrIleGlnLeuLeuCysLeuIleSerGlyTyrValProGlyAspMetGluValIleTrp
721
730 750 770
CTCGTCGATC43GCkAAAC~CTACAACATATTCCCATACACTGCACCCC~CACAAAGGAG LeuValAspGlyGlnLysAlaThrAsnIlePheProTyrThrAlaProGlyThrLysGlu
781
790 810 830
GGCAACGTGACCTCTACCCACAGCGAGCTCAACATCACCCAQGGCC=AGTGC43TATCCCAA GlyAsnValThrSerThrNisSerGluLeuAsnIleThrGlnGlyGluTrpValSerGln
850 870 890
841 AAAACCTACACCTGCCAGGTCACCTATCAAGGCIqTACCTI~AAAGATGAGGCTCGCAAG LysYhrTyrTbrCysGlnValThrTyrGlnGlyPheThrPheLysAspGluAlaArgLys
901
910 93O 950
TCCTCAGGTATCGCCCCCCTGTCCCCCAGAAACCCAGATGCGCGAGGCTCAGAGATGAGG CysSerG
961
970 990 i010
CCCAAGGCACGCCCTCATGCACCCTCTCACACACTGCAGAGTCCGACCCCCGAGGCGTGA
luSerAspProArgGlyValT
60
120
180
240
300
360
420
480
54O
600
660
720
780
1021
840 1801
1030 1050 1070
CGAGCTACCTGAGCCCACCCAGCCCCC~fGACCTGTATGTCCACAAGGCCCCCAAGATCA hrSerTyrLeuSerProProSerProLeuAspLeuTyrValHisLysAlaProLysIleT
1080 iii0 1130
1081 c C TGCCTC43TAGTGGACCTCGCCACCATGGAAGGCATGAAC CTGACCTGGTACCGGGAGA hr CysLeuValValAspLeuAl aThrMe tGIuGIyMe tAsnLeuThrTrpTyrArgGluS
i150 1170 1190
ll41 GCAAAGAACCCGTGAACCCGGGCC~CAAGAAGGATCA~TGGGACGATCA erLy_sGluProValAsnProGlyProLe~AsnLysLysAspHisPheAsnGlyThrIleT
1210 1230 1250
1201 CAGTCACGTCTACCCTGCCAGTGAACACCAATGACTC~ATCGAQC~CGAGACCTACTA~
hrValThrserThrLeuProValAsnThrAsnAspTrpIleGluGl~GluTnrTyrTyrc
1270 1290 1310
1261 GCACC43TGACCCACCCC~&CCTC42CCAAGGACATCGTGCGCTCCATTC42CAAC~=CCCCTG ysArgValThrHisProHisLeuProLysAspIleValArgSerIleAlaLysAlaProG
1330 1350 1370
1321 GTGAGC CACCd~GCC CAC~C~=AC~TGGCCC~=CCTCCTC~AOCCGGAGC ~TGACC C C
285
108
114
120
12
13
1390 1410 1430
1381 ACACCTATCCACAGGCAAGCGTGCCCCCCCGGATGTGTACYTGTI~2CTGCCACCGGAGGA 14 lyLysArgAlaProProAspValTyrLeuPheLeuProProGluGl
1450 1470 1490
1441 C4~AGCAGGC43ACCAAGGACAGAGTCACCCTCACGTGCCTGATCCAG~CTTCTTCCCCGC 15 uGluGlnGlyThrLysAspArgValThrLeuThrCysLeuIleGlnAsnPhePheProAl
1510 1530 1550
1501 GGACATI~CAGTCCAATC4DCTC42C~AACGACAC42CCCATCCAGACAGACCAGTACACCAC 15 aAspIleSerValGlnTrpLeuArgAsnAspSerProIleGlnThrAspGlnTyrThxTh
1570 1590 1610
1551 CACCCGGCCCCACAAGGTCTCGQGCTCCAGGCCTGCCTTCTIC_ATCT2CAGCCGCCTGGA 16 rThrGlyProHisLysValSerGlySerArgProAlaPhePheIlePheSerArgLeuGl
1630 1650 1670
1621 CGT2AC4203Cd3TC~ACTGGGAC~-AGAAAAACAAATTCACCTGCCAAG~TGAGGC 16 uValSerArgValAspTrpGluGlnLysAsnLysPheThrCysGlnValValHisGluAl
1690 1710 1730
1681 C-CTGTCCGGCTCTAGGATCCTCCAGAAATGGGTGTCCAAAACCCCCGGTAAATGATGCCC aLeuSerGlySerArgIleLeuGlrLLysTrpValSerLysThrProGlyLys
1750 1770 1790
1741 ACCCTCCTC C CGC CCCCACC C CCCAGGC/2TCCAC CTGCTGGGAGGGA~TC~CAA
17
18
1861 192
900
1921
Fig. 2 predicted amino acid sequence for the dog IGHEC germline gene is
860 shown. PolyA addition signal is indicated by an underline
1810 1830 1850
GACCC TCCATCTGTCCTTGTCAATAAACACTCCAGTGTCTGCTTGGAGC C CTC~oC-CACAC 18
1870 1890 1710
C CATITC~TGGGCAC~GTTGCAGAGCAGGGATGTC ~CAGAAGGGTC C CC
CAGGGTGT 1928
Sequence of the dog IGHEC gene. The entire nucleotide and
1020 tional studies have used linear peptides to map the Ige binding site. In one of these studies, an octapeptide from the human Iga constant region (Pro345-Phe-Asp-Leu-Phe-Ile- Arg-Lys352) inhibited passive sensitization, presumably by
286
Table 2 Comparison of percent identity of nucleotides and amino acid sequences of dog IGHEC region with human and mouse Ige constant region genes and proteins
% Identity of dog IGHEC to IGHEC of other species
CH1 CH2 CH3 CH4 Total
Mouse Igh-7 (~) DNA 54 63 64 66 62 Mouse Iga Protein 42 42 55 56 49 Human IGHEC DNA 69 67 74 71 70 Human Ig8 protein 59 53 62 55 57
occupying the Fc~ receptor sites on cells (Nio et al_ 1993). The equivalent region of the dog Ig~ chain shares only 50% identity with this octapeptide (Dog sequence: Pro-Leu-Asp- Leu-Tyr-Val-His-Lys). Based on this observation, attempts to use Ige peptides involved in Fce receptor binding to modulate allergic reactions in dogs would require the use of peptides derived from the dog Ige sequence.
We have presented the complete nucleotide and pre- dicted amino acid sequence of the dog I G H A C and I G H E C
genes. These sequences should prove useful for studying immune responses in dogs.
Acknowledgments We thank Dr. Ronald Ellis for critically reviewing the manuscript, Ms. Susan Pols for help in preparing the manuscript, and Mr. Jeffrey Aaronson for his help with submission of the sequence data to GenBank.
References
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