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Page 1: Sample Pages - Kalam BooksSample Pages Contents iii APPENDIX for PGMEE Volume 1 First Edition Dr Vaibhav Bharat MBBS, DNB General Surgery Director, MedE@sy Dr Aditi Bharat MBBS, MD

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Page 2: Sample Pages - Kalam BooksSample Pages Contents iii APPENDIX for PGMEE Volume 1 First Edition Dr Vaibhav Bharat MBBS, DNB General Surgery Director, MedE@sy Dr Aditi Bharat MBBS, MD

Sample Pages

Contents iii

APPENDIXfor PGMEE

Volume 1

First Edition

Dr Vaibhav Bharat MBBS, DNB General Surgery

Director, MedE@sy

Dr Aditi Bharat MBBS, MD Anaesthesiology (TATA Memorial Hospital, Mumbai)

Dr Ishad Aggarwal MBBS, MD Dermatology (IPGIMER, Kolkata)

Edited by Dr Harshvardhan Bharadwaj

MBBS, M.Med, DA

KALAM BOOKS

Page 3: Sample Pages - Kalam BooksSample Pages Contents iii APPENDIX for PGMEE Volume 1 First Edition Dr Vaibhav Bharat MBBS, DNB General Surgery Director, MedE@sy Dr Aditi Bharat MBBS, MD

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Contents v

First of all it is our pleasure and duty to thank all our readers, who have time and again shown faith in our en-deavours. It is always encouraging if your work is appreciated and we are grateful to all our readers. We started our Journey in 2011 with DNB CET Review which was an instant success and is our legendary creation till date. The collections of tables in the form of APPENDIX, at the end of the book were much appreciated and is in high demand even today. Hence we decided to recreate the magic of APPENDIX again, this time on a juggernautic scale and precision.

With changing pattern of PGMEE we have included colour pictures in our APPENDIX and made it a totally co-loured book in three easy to carry volumes. We have done our level best to come up with up-to-date material, but to err is human, and we are humans too. However we constantly keep in touch with our readers through our website www.medeasyindia.com, and our Facebook fan page https://www.facebook.com/MedEasyindia/ to keep them updated with any correction, change or improvement in our book.

We heartily invite any suggestions, corrections or discussions of PG Medical entrance material and MCQs on our mail id [email protected]

Thanks Authors/ EditorsAPPENDIX FOR PGMEEBy Team MedE@sy

Preface

Page 4: Sample Pages - Kalam BooksSample Pages Contents iii APPENDIX for PGMEE Volume 1 First Edition Dr Vaibhav Bharat MBBS, DNB General Surgery Director, MedE@sy Dr Aditi Bharat MBBS, MD

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Appendix Anatomy 1. Gametogenesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1

2. Male Gametogenesis (Spermatogenesis) . . . . . . . . . . . . . . . 1

3. Female Gametogenesis (Oogenesis) . . . . . . . . . . . . . . . . . . . 2

4. Germ Layer Derivatives . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4

5. Mesogastrium . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4

6. Adult Derivatives and Vestigial Remains of Embryonic Urogenital Structures/ Structural Homologues in Males and Females . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6

7. Development of Urinary Bladder . . . . . . . . . . . . . . . . . . . . . 8

8. Development of Vagina . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8

9. General Time Course of Gonadal Development . . . . . . . . . . 9

10. Development of External Genitalia . . . . . . . . . . . . . . . . . . . . 9

11. Development of Kidney Systems . . . . . . . . . . . . . . . . . . . . . 10

12. Development of CNS . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12

13. Branchial Arches . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13

14. Development of the Arterial System . . . . . . . . . . . . . . . . . 15

15. Anomalies of Aortic Arches . . . . . . . . . . . . . . . . . . . . . . . . . 16

16. Development of the Venous System . . . . . . . . . . . . . . . . . 17

17. Abnormal Venous Drainage . . . . . . . . . . . . . . . . . . . . . . . . . 18

18. Development of Diaphragm. . . . . . . . . . . . . . . . . . . . . . . . . 19

19. Development of GUT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19

20. Limb Development . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 20

21. Some Important Epithelium Linings (Classification Wise) . 20

22. Some Important Epithelium Linings (System Wise) . . . . . 21

23. Connective Tissues . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 22

24. Types of Fibres in Connective Tissue . . . . . . . . . . . . . . . . . . 24

25. Types of Collagen and Associated Diseases . . . . . . . . . . . . 25

26. Constituents of Connective Tissues in Various Tissues . . . 25

27. Types of Cartilages . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 26

28. Types of Epiphysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 27

29. Muscle Cells Types . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 27

30. Structural Classifications of Exocrine Glands . . . . . . . . . . . 28

31. Classification of Exocrine Glands on the Basis of Mechanism of Secretion . . . . . . . . . . . . . . . . . . . . . . . . . . . 29

32. Lymphatic organs: Distinctive Morphological Features . . . 30

33. Muscles Classification According Shape and orientation of Fibres . . . . . . . . . . . . . . . . . . . . . . . . . . . 31

34. Cranial Nerve Nuclei . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 31

35. Cranial Nerve Components . . . . . . . . . . . . . . . . . . . . . . . . . 32

36. Cranial Nerves FAQ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 33

37. Lymphatic Drainage of Perineal & Abdominal Structures . 33

38. Brachial Plexus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 35

39. Brachial Plexus Nerve Lesions . . . . . . . . . . . . . . . . . . . . . . . 36

40. Brachial Plexus Upper & Lower Root Lesions . . . . . . . . . . . 39

41. Lumbar Plexus (T12-L4) . . . . . . . . . . . . . . . . . . . . . . . . . . . . 39

42. Sacral Plexus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 40

43. Nerve Compression or Entrapment Syndromes . . . . . . . . . 41

44. Dermatomes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 42

45. Myotomes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 45

46. Vertebral Levels . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 46

47. Vertebral Levels of organs . . . . . . . . . . . . . . . . . . . . . . . . . . 48

48. Openings of Diaphragm (Mnemonic: Voice of America) . . 48

49. Vertebral Column . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 48

50. Foramina of the Skull . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 49

51. Layers of Scalp (Mnemonic form) . . . . . . . . . . . . . . . . . . . . 52

52. Muscles of Mastication (Acting on Temporomandibular Joint) . . . . . . . . . . . . . . . . 52

53. Movements Around TMJ . . . . . . . . . . . . . . . . . . . . . . . . . . . 53

54. Extrinsic Muscles of tongue . . . . . . . . . . . . . . . . . . . . . . . . . 53

55. Anatomy of tongue . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 54

56. Muscles of Soft Palate . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 55

57. Muscles of Pharynx . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57

58. Cartilages of Larynx . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57

59. Joints and Ligaments of the Shoulder Region . . . . . . . . . . 60

60. Anterior Axioappendicular Muscles . . . . . . . . . . . . . . . . . . 62

61. Posterior Axioappendicular Muscles . . . . . . . . . . . . . . . . . . 62

62. Scapulohumeral (intrinsic Shoulder) Muscles . . . . . . . . . . 63

63. Muscles of Arm . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 63

64. Muscles of Anterior Compartment of forearm . . . . . . . . . 64

65. Muscles of Posterior Compartment of forearm . . . . . . . . . 65

66. Intrinsic Muscles of Hand (Comprehensive) . . . . . . . . . . . 66

67. Muscles of Hand (Simplified) . . . . . . . . . . . . . . . . . . . . . . . . 67

68. Muscles of Anterior Abdominal Wall . . . . . . . . . . . . . . . . . 68

69. Muscles of Posterior Abdominal Wall . . . . . . . . . . . . . . . . . 68

70. Corresponding Layers of Anterior Abdominal Wall, Spermatic Cord, and Scrotum . . . . . . . . . . . . . . . . . . . . . . . 69

71. Eponymous Fascia . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 70

72. Muscles of Gluteal Region . . . . . . . . . . . . . . . . . . . . . . . . . . 70

73. Muscles of the Anterior/Extensor Fascial Compartment of the Leg . . . . . . . . . . . . . . . . . . . . . . . . . . . 71

74. Muscles of the Lateral Fascial Compartment of the Leg . . 71

75. Ligaments of Ankle Joint . . . . . . . . . . . . . . . . . . . . . . . . . . . 71

76. Muscles & Tendons of Sole of Foot . . . . . . . . . . . . . . . . . . . 72

77. Muscles of Sole of Foot (Comprehensive) . . . . . . . . . . . . . 72

78. Components of Arches of Foot . . . . . . . . . . . . . . . . . . . . . . 73

79. Engineering of Arches of Foot . . . . . . . . . . . . . . . . . . . . . . . 74

80. Muscles of Pelvic Walls and Floor . . . . . . . . . . . . . . . . . . . . 74

81. Perineal Pouches . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 76

82. Supports of Uterus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 77

83. Structures Passing Through Greater and Lesser Sciatic foramina . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 79

84. Anal Canal . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 79

85. Anal Sphincters . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 80

86. Inguinal Canal . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 81

Contents

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47. Functional Classification of Vessels . . . . . . . . . . . . . . . . . . 120

48. Respiratory Centres . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 121

49. Types of Hypoxia . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 123

50. Pulmonary Volumes and Capacities . . . . . . . . . . . . . . . . . 123

51. Dead Space . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 125

52. Rapidly Acting/ Small Molecule Neurotransmitters. . . . . 126

53. Slowly Acting/Large Molecule Neurotransmitters; the Neuropeptides . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 128

54. Neurotransmitters and Hormones That influence Feeding and Satiety Centers in the Hypothalamus . . . . . . . . . . . . 128

55. Autonomic Nervous System . . . . . . . . . . . . . . . . . . . . . . . . 129

56. Autonomic Effects on Various organs of the Body . . . . . . 130

57. Physiology of Cerebellum . . . . . . . . . . . . . . . . . . . . . . . . . 131

58. Hypothalamic Nuclei . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 133

59. Ascending (Sensory) Tracts of Spinal Cord . . . . . . . . . . . . 133

60. Descending (Motor) Tracts of Spinal Cord . . . . . . . . . . . . 136

61. Parasympathetic Ganglions in Head and Neck . . . . . . . . . 138

62. Physiology of CSF . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 140

63. Important Values Regarding Excretory System . . . . . . . . . 141

64. Renal Physiology . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 141

65. Determinants of GFR . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 143

66. Autoreguation of GFR and Renal Blood Flow . . . . . . . . . . 144

67. Effect of Afferent and Efferent Arteriole on Gfr and Renal Blood Flow . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 147

68. Renal Clearance . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 148

69. Free Water Clearance . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 148

70. Acidification of the Urine & Bicarbonate Excretion . . . . . 149

71. Prostaglandins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 149

72. General Features of Hormone Classes . . . . . . . . . . . . . . . 150

73. Classification of Hormones by Mechanism of Action . . . 150

74. Endocrine Glands, Hormones, and their Functions and Structure . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 151

75. Anterior Pituitary Hormone Expression and Regulation . 153

76. Adrenal Gland . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 154

77. Factors Affecting Growth Hormone . . . . . . . . . . . . . . . . . 155

78. Gastrointestinal Hormone . . . . . . . . . . . . . . . . . . . . . . . . . 156

79. Effects of Estrogen and Progesterone on Different organs . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 156

80. Uterine Cycle or Menstrual Cycle . . . . . . . . . . . . . . . . . . . 157

81. Phases of Gastric Acid Secretion . . . . . . . . . . . . . . . . . . . . 158

82. Stages of Deglutition . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 158

83. Urinary Bladder innervation . . . . . . . . . . . . . . . . . . . . . . . 159

84. Micturition Reflex . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 160

85. Urinary Bladder Dysfunction . . . . . . . . . . . . . . . . . . . . . . . 161

86. Decompression Sickness . . . . . . . . . . . . . . . . . . . . . . . . . . 162

87. Stages of Sleep Awake Cycle and Its Disorders . . . . . . . . 162

88. Sleep Waves . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 164

89. Sleep Cycle . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 166

90. Methods of Heat Loss . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 166

91. Mechanoreceptors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 167

92. Pain Pathway . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 168

93. Terms Used in Pain . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 170

Appendix Physiology

1. Body Compartments Overview . . . . . . . . . . . . . . . . . . . . . . 83 2. Body Fluid Compartments Volume Measurements

Centre Alignment . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 83 3. Ion Concentrations of Body Fluids . . . . . . . . . . . . . . . . . . . 84 4. Constituents of Extracellular Fluid . . . . . . . . . . . . . . . . . . . 85 5. Membrane Potential . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 86 6. Intracellular & Extracellular Concentrations and Nernst

Equilibrium Potential Values of Ions . . . . . . . . . . . . . . . . . . 87 7. Compartment Wise Buffer Systems . . . . . . . . . . . . . . . . . . 87 8. Composition of Gastrointestinal Secretions . . . . . . . . . . . . 87 9. Normal Transport of Substances by the intestine

and Location of Maximum Absorption or Secretion . . . . . 88 10. Daily Water Turnover (ml) in the Gastrointestinal Tract . . 88 11. Composition & Characteristic of Bile . . . . . . . . . . . . . . . . . 89 12. Replacement Guidelines for Sweat and Gastrointestinal

Fluid Losses . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 89 13. Osmolarity . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 90 14. Glucose Transporter . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 90 15. Ionic Basis of Nerve Action Potential . . . . . . . . . . . . . . . . . 91 16. Rate of Firing . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 92 17. Refractory Periods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 92 18. Receptor Potential . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 93 19. Myocardial Action Potential (Non Pacemaker) . . . . . . . . . 93 20. Pacemaker Action Potential . . . . . . . . . . . . . . . . . . . . . . . . . 95 21. Muscle Sensory Receptor . . . . . . . . . . . . . . . . . . . . . . . . . . . 96 22. Stretch Reflex Vs inverse Stretch Reflex . . . . . . . . . . . . . . . 97 23. Strength Duration Curve . . . . . . . . . . . . . . . . . . . . . . . . . . . 99 24. Muscle Cells Types . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 100 25. Isometric Versus Isotonic Exercise . . . . . . . . . . . . . . . . . . 100 26. Contractile Apparatus . . . . . . . . . . . . . . . . . . . . . . . . . . . . 100 27. Sliding Filament theory of Muscle Contraction . . . . . . . . 102 28. Classification of Fiber Types in Skeletal Muscles . . . . . . . 105 29. Types of Nerve Fibres . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 105 30. Clotting Factors & Coagulation Cascade . . . . . . . . . . . . . 106 31. Anticoagulant Mechanisms . . . . . . . . . . . . . . . . . . . . . . . . 108 32. Deficiency of Clotting Factors . . . . . . . . . . . . . . . . . . . . . . 109 33. Reticulocyte Count . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 109 34. Blood indices . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 110 35. Neutrophil Count . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 110 36. Fluid Filtration Across Capillaries . . . . . . . . . . . . . . . . . . . . 111 37. Gas Content of Blood . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 111 38. Resting Blood Flow and O2 Consumption

of Various organs . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 112 39. Cardiac Cycle Phases . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 112 40. Volume-Pressure Diagram During the Cardiac Cycle . . . . 113 41. JVP Waveform . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 114 42. Heart Sounds . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 116 43. Central Vs Peripheral Chemoreceptor . . . . . . . . . . . . . . . 116 44. Baroreceptors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 117 45. Fetal Erythrogenesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11846. Fetal Circulation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 119

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94. Fast Vs. Slow Pain . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 171

95. Visual Pathway . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 171

96. Auditory Pathway . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 173

97. Olfaction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 173

98. Primary Sensations of Taste . . . . . . . . . . . . . . . . . . . . . . . . 176

Appendix Biochemistry

1. Enzyme inhibition . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 179

2. Michaelis-Menten Equation. . . . . . . . . . . . . . . . . . . . . . . . 181

3. Difference Between Functional and Non-Functional Enzymes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 182

4. Lactate Dehydrogenase . . . . . . . . . . . . . . . . . . . . . . . . . . . 182

5. Cofactors of Different Enzymes . . . . . . . . . . . . . . . . . . . . 183

6. Major Properties of the Glycosaminoglycans . . . . . . . . . . 183

7. Vitamins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 184

8. Subtypes of Vitamin K . . . . . . . . . . . . . . . . . . . . . . . . . . . . 185

9. Deficiencies and toxicities of Metals . . . . . . . . . . . . . . . . . 186

10. Principal Proteins of RBC Membrane . . . . . . . . . . . . . . . . 187

11. Oxygen Binding Mechanism of Hemoglobin . . . . . . . . . . 188

12. Shift of Oxygen Dissociation Curve . . . . . . . . . . . . . . . . . . 190

13. Steps of Heme/Porphyrin Ring Synthesis . . . . . . . . . . . . . 191

14. Lead toxicity . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 192

15. Purine Biosynthesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 192

16. Lesch Nyhan Syndrome . . . . . . . . . . . . . . . . . . . . . . . . . . . 195

17. The Principal Methods and Preparations Used in Biochemical Laboratories . . . . . . . . . . . . . . . . . . . . . . . . 196

18. Metabolic Pathways . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 197

19. Substrates of Different organs . . . . . . . . . . . . . . . . . . . . . . 198

20. Carbohydrate Metabolism Overview . . . . . . . . . . . . . . . . 199

21. Tricarboxylic Acid Cycle (Tca Cycle/ Krebs Cycle/ Citric Acid Cycle) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 199

22. Glycolysis and Gluconeogenesis . . . . . . . . . . . . . . . . . . . . 200

23. ATP formation in the Catabolism of Glucose . . . . . . . . . . 203

24. Fate of Pyruvate . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 204

25. Anaerobic Glycolysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 205

26. Tests Based Upon Reducing Property of Sugars . . . . . . . . 206

27. Calories of Food Components . . . . . . . . . . . . . . . . . . . . . . 206

28. Plasma Concentrations of Metabolic Fuels (Mmol/L) in the Fed and Fasting States . . . . . . . . . . . . . . . . . . . . . . . 207

29. Summary of Few Important Aspects of the Complexes of ETC . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 207

30. Respiratory Poisons, inhibitors & Uncouplers . . . . . . . . . 208

31. Glucose Transporter . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 210

32. Factors Affecting Phosphorylase . . . . . . . . . . . . . . . . . . . . 210

33. Glycogenesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 211

34. Glycogenolysis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 211

35. Actions of insulin . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 212

36. Effects of insulin . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 212

37. ATP Production in Substrate Level Versus Oxidative Phosphorylation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 213

38. Free Energy of Hydrolysis of Some organophosphates of

Biochemical Importance . . . . . . . . . . . . . . . . . . . . . . . . . . 213

39. Respiratory Quotient . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 213

40. Amino Acid Structure . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 214

41. Amino Acid Polarity and Charge . . . . . . . . . . . . . . . . . . . . 215

42. Essential and Non Essential Amino Acids . . . . . . . . . . . . . 215

43. Typical Range of Pka Values of Side Groups of Amino Acids . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 216

44. Amino Acid Titration Curve . . . . . . . . . . . . . . . . . . . . . . . . 216

45. Transamination . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 220

46. Ketogenic and Glucogenic Amino Acids . . . . . . . . . . . . . . 221

47. Biologically Important Compounds From Amino Acids . . 221

48. Reverse Codon Table of Amino Acids . . . . . . . . . . . . . . . . 222

49. Selenocysteine the 21st Amino Acid . . . . . . . . . . . . . . . . . 222

50. Amino Acids FAQ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 222

51. Sites of Pathways of Protein Synthesis . . . . . . . . . . . . . . . 223

52. Disorders of Phenyl Alanine Metabolism . . . . . . . . . . . . . 223

53. Tyrosine Metabolism Disorders . . . . . . . . . . . . . . . . . . . . . 223

54. Metabolism of Sulphur Containing Amino Acids . . . . . . . 224

55. Protein Structure . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 224

56. Current Concepts in Protein Folding . . . . . . . . . . . . . . . . . 225

57. Chaperones . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 226

58. Urea Cycle . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 227

59. Denaturation and Precipitation of Proteins . . . . . . . . . . . 228

60. Cori Cycle . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 229

61. Aptamers . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 230

62. De Novo Synthesis of Fatty Acids (Lipogenesis) . . . . . . . . 231

63. Fatty Acid Oxidation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 233

64. Beta Oxidation of Fatty Acids . . . . . . . . . . . . . . . . . . . . . . . 233

65. Cholesterol Biosynthesis . . . . . . . . . . . . . . . . . . . . . . . . . . 235

66. Steroid Hormone Synthesis . . . . . . . . . . . . . . . . . . . . . . . . 237

67. Vitamin-D: Synthesis and Metabolism . . . . . . . . . . . . . . . 238

68. Major Lipoprotein Classes . . . . . . . . . . . . . . . . . . . . . . . . . 238

69. Major Apolipoproteins . . . . . . . . . . . . . . . . . . . . . . . . . . . . 239

70. Chylomicrons. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 239

71. Lysosomal Storage Disorders . . . . . . . . . . . . . . . . . . . . . . . 240

72. Frederickson Classification of Hyperlipoproteinemias . . 242

73. Summary of the Major Drugs Used for the Treatment of Hyperlipidemia . . . . . . . . . . . . . . . . . . . . . . . 243

74. Newer Drugs for Dyslipidemia . . . . . . . . . . . . . . . . . . . . . . 244

75. Bile Acid and Salts . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 244

76. Ketogenesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 246

77. Types of Lipases in the Human Body . . . . . . . . . . . . . . . . . 248

78. DNA Structure . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 248

79. Structural forms of DNA . . . . . . . . . . . . . . . . . . . . . . . . . . 250

80. DNA Sequences With Unusual Structures . . . . . . . . . . . . 251

81. Mitochondrial DNA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 252

82. Classes of Proteins involved in Replication . . . . . . . . . . . . 252

83. Mechanism of DNA Repair . . . . . . . . . . . . . . . . . . . . . . . . . 252

84. Human Diseases of DNA Damage Repair . . . . . . . . . . . . . 253

85. Epigenetics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 253

86. Techniques of Molicular Biology . . . . . . . . . . . . . . . . . . . . 254

87. Some of the Enzymes Used in Recombinant DNA Research . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 254

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88. Polymerase Chain Reaction . . . . . . . . . . . . . . . . . . . . . . . . 255 89. Milestones in Human Genome Sequencing . . . . . . . . . . . 256

Appendix Pharmacology

1. Kinetics of Elimination . . . . . . . . . . . . . . . . . . . . . . . . . . . . 257

2. Dose Response Curve . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 258

3. Types of Conjugation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 260

4. P450s (CYPS), Drugs Metabolized (Substrates), inducers, and inhibitors . . . . . . . . . . . . . . . . . . . . . . . . . . . 261

5. List of Prodrugs . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 261

6. Drugs and Cosmetic Rules of 1945 . . . . . . . . . . . . . . . . . . 262

7. Orphan Drugs . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 263

8. Clinical Trial and Preclinical Testing . . . . . . . . . . . . . . . . . 264

9. Pre-Clinical Phase . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 265

10. Drug Storage instructions. . . . . . . . . . . . . . . . . . . . . . . . . . 266

11. Cholinergic Drugs . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 266

12. Muscarinic Receptor . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 267

13. Classification of Atropine Substitutes . . . . . . . . . . . . . . . . 267

14. Receptor Actions of Sympathomimetic and Dopaminergic Agents . . . . . . . . . . . . . . . . . . . . . . . . . 268

15. Endogenous Catecholamines . . . . . . . . . . . . . . . . . . . . . . . 268

16. Adrenergic Agonist . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 269

17. Therapeutic Classification of Adrenergic Drugs . . . . . . . . 270

18. Effects of Adrenaline on Blood Pressure . . . . . . . . . . . . . . 270

19. Vasomotor Re-Reversal . . . . . . . . . . . . . . . . . . . . . . . . . . . 271

20. Classification of Alpha Adrenergic Blocking Agents . . . . . 271

21. Classification of Beta Blockers . . . . . . . . . . . . . . . . . . . . . . 272

22. Actions Ascribed to Different Types of Opioid Receptors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 273

23. Opioid Drugs and their Actions on Opioid Receptors . . . 273

24. Methadone . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 273

25. Serotonin Receptors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 274

26. 2Nd Generation Anti Histamine . . . . . . . . . . . . . . . . . . . . . . 275

27. Classification of Antibiotics . . . . . . . . . . . . . . . . . . . . . . . . 275

28. Post Antibiotic Effect . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 276

29. Cephalosporins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 277

30. Antibiotic Treatment of Pseudomonas Aeruginosa . . . . 278

31. Penicillin G . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 278

32. Classification of ESBL . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 279

33. Antituberculous Drugs . . . . . . . . . . . . . . . . . . . . . . . . . . . . 279

34. Antituberculosis Drugs Dosage . . . . . . . . . . . . . . . . . . . . . 280

35. Antiviral Chemotherapy and Chemoprophylaxis . . . . . . . 281

36. Targets and Mechanism of Antiretroviral Drugs . . . . . . . . 285

37. Antiretroviral Drugs Used in the Treatment of HIV infection . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 286

38. Ocular Side Effects of HAART . . . . . . . . . . . . . . . . . . . . . . 289

39. Therapy for Chronic Hepatitis B . . . . . . . . . . . . . . . . . . . . . 289

40. Latest Guidelines for Treatment of Hepatitis C . . . . . . . . 290

41. Classification of Cancer Chemotherapy Agents . . . . . . . . 291

42. Anticancer Drug Toxicities . . . . . . . . . . . . . . . . . . . . . . . . . 296

43. Anticancer Drugs toxic Amelioration . . . . . . . . . . . . . . . . . 296

44. Classification of the Acute Emetogenic Potential of Antineoplastic Medication . . . . . . . . . . . . . . . . . . . . . . . . . 297

45. Calcineurin inhibitors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 298 46. FDA Approved Monoclonal Antibodies &

Targeted therapies . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 300 47. Monoclonal Antibodies Used in the Treatment

of Arthritis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 301 48. Features of Gpiib/Iiia Antagonists . . . . . . . . . . . . . . . . . . . 302 49. Rituximab . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 303 50. Side Effects of Common Anti Epileptics . . . . . . . . . . . . . . 303 51. Classification of Anti Arrhythmic Drugs . . . . . . . . . . . . . . 305 52. Drugs Used in Arrhythmias . . . . . . . . . . . . . . . . . . . . . . . . 305 53. Commonly Used Antiarrhythmic Agents: Chronic oral

Dosing/Primary indications . . . . . . . . . . . . . . . . . . . . . . . . 306 54. Glucose-Lowering therapies for Type 2 Diabetes . . . . . . . 306 55. Insulins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 308 56. Quick-Relief Medications for Asthma . . . . . . . . . . . . . . . . 309 57. Long-Term Control Medications for Asthma . . . . . . . . . . 310 58. Management of Childhood Asthma . . . . . . . . . . . . . . . . . 312 59. Use of Metered Dose inhaler . . . . . . . . . . . . . . . . . . . . . . . 313 60. Anti Hypertensive Medications . . . . . . . . . . . . . . . . . . . . . 314 61. Diuretics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 315 62. Drug therapy of Gout . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 316 63. Commercially Available Steroid Hormones . . . . . . . . . . . 317 64. Drugs Used in Psoriasis . . . . . . . . . . . . . . . . . . . . . . . . . . . 318 65. Side Effect Profile of Antiparkinson Drugs . . . . . . . . . . . . 319 66. Drugs or Drug Groups Under investigation for

Use in Angina. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 320 67. Plasma Expanders . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 320 68. Anticoagulants . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 321 69. Advantage and Consequences of Those Advantages

with LMWH . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 322 70. Drugs Affecting Platlet Function and Mechanism

of Action . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 322 71. Drugs Used in Osteoporosis . . . . . . . . . . . . . . . . . . . . . . . . 322 72. Tamoxifen . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 324 73. Bisphosphonates . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 324 74. Classification of Adverse Drug Reactions . . . . . . . . . . . . . 326 75. Gell and Coombs Classification of Immunologic Drug

Reactions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 326 76. Drugs Associated With Edema formation . . . . . . . . . . . . . 327 77. Drug induced SLE . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 327 78. Drug-induced Respiratory Reactions . . . . . . . . . . . . . . . . . 327 79. Drugs and Endocrine Disease . . . . . . . . . . . . . . . . . . . . . . 328 80. Effects of Drugs on Thyroid Hormones . . . . . . . . . . . . . . 329 81. Drugs Causing Megaloblastic Anemia . . . . . . . . . . . . . . . 330 82. Ototoxic Drugs . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 330

Appendix Microbiology

1. Scientists and Titles in Microbiology . . . . . . . . . . . . . . . . . 331 2. Microbial Staining . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 331 3. Gram and Acid-Fast Staining Methods . . . . . . . . . . . . . . . 332 4. Ziehl-Neelsen Acid-Fast Stain. . . . . . . . . . . . . . . . . . . . . . . 332

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56. Basis of Typing / Sub-Classification of Bacteria . . . . . . . . 364

57. Virulence Factors of Bacteria . . . . . . . . . . . . . . . . . . . . . . . 364

58. Clinical Implications of Important Bacteria. . . . . . . . . . . . 364

59. Characteristics of Medically Important Streptococci . . . . 365

60. Important infections Caused by Staph Aureus . . . . . . . . . 366

61. Acute infectious Diarrhea . . . . . . . . . . . . . . . . . . . . . . . . . 367

62. Viral Causes of Gastroenteritis Among Humans . . . . . . . 367

63. Characteristics of Gastroenteritis Caused by Viral and Bacterial Agents . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 368

64. Mechanism of Diarrhoea . . . . . . . . . . . . . . . . . . . . . . . . . . 368

65. Types of E Coli . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 368

66. Important Clinical Features of Neisseriae . . . . . . . . . . . . . 369

67. Neisseria & Chlamydia . . . . . . . . . . . . . . . . . . . . . . . . . . . . 369

68. Treponema . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 370

69. Actinomycosis Vs Nocardia . . . . . . . . . . . . . . . . . . . . . . . . 370

70. Mycobacteria that Infect Humans . . . . . . . . . . . . . . . . . . . 371

71. Runyon Classification of Mycobacteria . . . . . . . . . . . . . . . 372

72. Atypical Mycobacteria . . . . . . . . . . . . . . . . . . . . . . . . . . . . 372

73. Virus Classification . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 373

74. FAQ Virus Classification . . . . . . . . . . . . . . . . . . . . . . . . . . . 374

75. Shape of Viruses . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 375

76. Viroids . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 375

77. Prions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 376

78. Viral inclusion Bodies . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 376

79. Common Routes of Viral infection in Humans . . . . . . . . . 377

80. influenza Virus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 377

81. Sites of Predilection for Human Herpes Virus (HHV) . . . . 378

82. Clinical and Epidemiologic Features of Viral Hepatitis . . . 379

83. Serologic Patterns of Hepatitis B infection . . . . . . . . . . . . 380

84. Human Papilloma Virus . . . . . . . . . . . . . . . . . . . . . . . . . . . 381

85. HPV Vaccine . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 382

86. Viral Hemorrhagic Fevers . . . . . . . . . . . . . . . . . . . . . . . . . . 383

87. Virus Associated With Human Malignancy . . . . . . . . . . . . 383

88. infectious Agents Associated With Lymphoid Malignancy . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 384

89. Chandipura Virus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 384

90. Antiviral Chemotherapy and Chemoprophylaxis . . . . . . . 385

91. Fungi Vs Bacteria . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 389

92. Classification of Fungi & Mycosis . . . . . . . . . . . . . . . . . . . 389

93. KOH Mount . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 391

94. Forms of Fungus . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 392

95. Some Important Fungal infections . . . . . . . . . . . . . . . . . . 393

96. Diagnostic Features of Some Important Fungus . . . . . . . 393

97. Protozoan Parasites . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 393

98. Characteristic Features of the Malaria Parasite (Romanowsky-Stained Preparations) . . . . . . . . . . . . . . . . 394

99. Diseases Due to Helminths . . . . . . . . . . . . . . . . . . . . . . . . 395

100. Parasitic Nematode . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 397

101. FAQ Lists of Parasitology . . . . . . . . . . . . . . . . . . . . . . . . . . 398

102. Mode of infection of Parasites . . . . . . . . . . . . . . . . . . . . . . 400

103. Parasite infecting Different Tissues . . . . . . . . . . . . . . . . . . 400

104. Parasites Present in Muscles . . . . . . . . . . . . . . . . . . . . . . . 400

5. Sterilization, Antisepsis & Disinfection . . . . . . . . . . . . . . . 333 6. Disinfectants . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 333 7. Physical Methods of Sterilization . . . . . . . . . . . . . . . . . . . 334 8. Chemical Methods of Sterlization . . . . . . . . . . . . . . . . . . . 334 9. Efficacy of Chemical Disinfection . . . . . . . . . . . . . . . . . . . . 336 10. Working Temperature and Time for Different Techniques of Heat Sterilization . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 337 11. Sterilization of Some Important Materials . . . . . . . . . . . . 337 12. Efficacy of Sterilisation Methods . . . . . . . . . . . . . . . . . . . . 338 13. Sterilization of Prions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 338 14. Types of Immunity . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 339 15. Antigen . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 339 16. Antibody . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 339 17. Antigen- Antibody Reaction Curve . . . . . . . . . . . . . . . . . . 340 18. Immunoglobulins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 340 19. Hypersensitivity Reactions . . . . . . . . . . . . . . . . . . . . . . . . . 341 20. Cytokines . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 342 21. Complements System . . . . . . . . . . . . . . . . . . . . . . . . . . . . 344 22. Human MHC Gene Products . . . . . . . . . . . . . . . . . . . . . . . 345 23. Serological Test . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 346 24. Chemokines . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 346 25. Immunodeficiency Diseases . . . . . . . . . . . . . . . . . . . . . . . 346 26. Classes of Human Pathogens and their Lifestyles . . . . . . 348 27. Phases of the Microbial Growth Curve . . . . . . . . . . . . . . . 349 28. Prokaryotes Vs Eukaryotes . . . . . . . . . . . . . . . . . . . . . . . . . 350 29. Bacterial Genetics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 350 30. Mechanisms of Antigenic Variation . . . . . . . . . . . . . . . . . . 351 31. Vertical Transmission of Some Important Pathogens . . . 352 32. Classification of Bacteria . . . . . . . . . . . . . . . . . . . . . . . . . . 352 33. Shape & Arrangement of Bacteria . . . . . . . . . . . . . . . . . . . 353 34. Motility of organism . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 353 35. Bacterial Oxygen Requirement . . . . . . . . . . . . . . . . . . . . . 353 36. Bacterial Capsule . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 354 37. Bacterial Flagella Types . . . . . . . . . . . . . . . . . . . . . . . . . . . 354 38. Spore forming Bacteria . . . . . . . . . . . . . . . . . . . . . . . . . . . 355 39. Bacterial interference With Phagocytes . . . . . . . . . . . . . . 355 40. Nosocomial infection . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 356 41. Drugs of Choice for infectious Disease Prophylaxis . . . . . 356 42. Exotoxin Vs Endotoxin . . . . . . . . . . . . . . . . . . . . . . . . . . . . 357 43. Characteristic of Different toxins . . . . . . . . . . . . . . . . . . . . 357 44. Growth Factors of Micro organisms . . . . . . . . . . . . . . . . . 358 45. Alternative/ Common Names of Bacteria . . . . . . . . . . . . 358 46. Numerically Named Diseases . . . . . . . . . . . . . . . . . . . . . 359 47. Important Tests/Skin Tests . . . . . . . . . . . . . . . . . . . . . . . . . 359 48. Important Fevers . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 359 49. Organisms Causing UTI . . . . . . . . . . . . . . . . . . . . . . . . . . . . 360 50. Commensals in Human Body . . . . . . . . . . . . . . . . . . . . . . . 360 51. Categories of Culture Media . . . . . . . . . . . . . . . . . . . . . . . 361 52. Different Classes of Specific Culture Media . . . . . . . . . . . 362 53. Specific Culture Media Uses . . . . . . . . . . . . . . . . . . . . . . . 362 54. Colony Appearance on Culture . . . . . . . . . . . . . . . . . . . . . 363 55. Bacterial Identification . . . . . . . . . . . . . . . . . . . . . . . . . . . . 363

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105. Some Recently Recognized infectious Agents and Manifestations . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 401

106. Influenza A Virus including Subtype H1N1 . . . . . . . . . . . . 401

107. Guidelines on Categorization of Seasonal influenza A H1N1 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 404

Appendix Pathology

1. Blood Collection System (Vacutainer System) . . . . . . . . . 405

2. Genotypes & Phenotypes in ABO System . . . . . . . . . . . . . 406

3. Reactions of ABO Groups . . . . . . . . . . . . . . . . . . . . . . . . . . 406

4. Selection of Blood and Plasma by ABO Type . . . . . . . . . . 406

5. Blood Components and indications for Use . . . . . . . . . . . 406

6. Shelf Life of Blood Components . . . . . . . . . . . . . . . . . . . . 407

7. Blood Component Separation . . . . . . . . . . . . . . . . . . . . . . 408

8. Complications of Massive Blood Transfusion . . . . . . . . . . 409

9. Hematopoietic Stem Cells . . . . . . . . . . . . . . . . . . . . . . . . . 410

10. Cells of Peripheral Smear . . . . . . . . . . . . . . . . . . . . . . . . . 412

11. Pathologic Red Cells in Blood Smears . . . . . . . . . . . . . . . . 413

12. Erythrocyte and Reticulocyte inclusions . . . . . . . . . . . . . . 415

13. Urinary Crystals . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 415

14. Urinary Cast . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 416

15. Cellular Responses to injury . . . . . . . . . . . . . . . . . . . . . . . . 418

16. Reversible Cell injury . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 418

17. Properties of the Principal Free Radicals involved in Cell injury . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 419

18. Fixatives Used in Pathology . . . . . . . . . . . . . . . . . . . . . . . . 420

19. Histology/Pathology/Microbiology Stains . . . . . . . . . . . . 421

20. Hypertrophy, Hyperplasia and Atrophy. . . . . . . . . . . . . . . 423

21. Metaplasia, Dysplasia and Neoplasia . . . . . . . . . . . . . . . . 423

22. Necrosis Vs Apoptosis . . . . . . . . . . . . . . . . . . . . . . . . . . . . 424

23. Mechanism of Apoptosis . . . . . . . . . . . . . . . . . . . . . . . . . . 426

24. Proteins in BCL 2 Superfamily . . . . . . . . . . . . . . . . . . . . . . 428

25. Types of Necrosis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 428

26. Types of Calcification . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 429

27. Classification and Diagnosis of Amyloidosis . . . . . . . . . . . 429

28. Acute inflammation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 431

29. Principal Mediators of inflammation . . . . . . . . . . . . . . . . 432

30. Chemokines . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 433

31. Connective Tissue/ Wound Repair . . . . . . . . . . . . . . . . . . 434

32. Growth Factors and Cytokines Affecting Various Steps in Wound Healing . . . . . . . . . . . . . . . . . . . . . . . . . . . 436

33. Activators of Angiogenesis . . . . . . . . . . . . . . . . . . . . . . . . . 436

34. Inhibitors of Angiogenesis . . . . . . . . . . . . . . . . . . . . . . . . . 436

35. Growth Factors and Cytokines involved in Regeneration and Wound Healing . . . . . . . . . . . . . . . . 437

36. Pedigree & inheritance . . . . . . . . . . . . . . . . . . . . . . . . . . . . 438

37. Inheritance Patterns . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 439

38. Terms Used in Genetics & inheritance . . . . . . . . . . . . . . . 440

39. Examples of Different inheritance Patterns . . . . . . . . . . . 441

40. Some Commonly Identified Microdeletion and Microduplication Syndromes FISH Analysis . . . . . . . 442

41. Genetic Risk Assessment in X- Linked Recessive inheritance . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 443

42. Genetic Risk Assessment in Autosomal Recessive inheritance . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 444

43. Translocation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 444

44. Genes Associated With Hereditary Cancer . . . . . . . . . . . . 445

45. Cell Cycle . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 447

46. Cancer Genesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 448

47. Oncogenes and Proto-oncogene . . . . . . . . . . . . . . . . . . . . 449

48. Tumor Suppressor Genes . . . . . . . . . . . . . . . . . . . . . . . . . 450

49. DNA Repair & Defects . . . . . . . . . . . . . . . . . . . . . . . . . . . . 451

50. Techniques Commonly Used for Mutation Detection . . . 451

51. HLA Markers . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 452

52. Paraneoplastic Syndromes Associated With Common Cancers . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 453

53. Tumor Markers . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 454

54. Immunohistochemical Markers (IHC) . . . . . . . . . . . . . . . . 455

55. Immunohistochemical Marker Profiles of Soft Tissue Tumors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 458

56. Carcinogens . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 458

57. Oncogenic Viruses . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 459

58. Cluster Differentiation Markers of Lymphoid Cell Maturation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 460

59. Cluster Differentiation Markers of Myeloid Cell Maturation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 461

60. Cluster Differentiation Markers of Different Cells . . . . . . 461

61. Cluster Differentiation Markers of B Cell Lymphomas . . 462

62. Cluster Differentiation Markers of T Cell Lymphomas . . 462

63. CD Markers Flow Chart of Lymphoma and Leukemias . . 463

64. Hodgkins Vs Non Hodgkins . . . . . . . . . . . . . . . . . . . . . . . . 464

65. Clinical Staging of Hodgkin and Non-Hodgkin Lymphomas (Ann Arbor Classification) . . . . . . . . . . . . . . . . . . . . . . . . . 464

66. Grades of NHL . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 464

67. Frequency of involvement of Nodal Sites in Hodgkin Lymphoma . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 465

68. Subtypes of Hodgkin’s Lymphoma . . . . . . . . . . . . . . . . . . 465

69. Treatment of Hodgkin’s Lymphoma . . . . . . . . . . . . . . . . . 466

70. Major Subtypes of Aml in the WHO Classification . . . . . . 466

71. Types of Endocarditis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 467

72. Thyroid Carcinoma . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 468

73. Prognosis of Thyroid Carcinoma . . . . . . . . . . . . . . . . . . . . 471

74. Malignant Epithelial Lung Tumors . . . . . . . . . . . . . . . . . . . 471

75. Types of Collagen and Associated Diseases . . . . . . . . . . . 473

76. Constituents of Connective Tissues in Various Tissues . . 474

77. Diseases With Granulomatous inflammation . . . . . . . . . . 474

78. Classification and Characteristics of Selected Immune-Mediated Vasculitis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 475

79. Antineutrophil Cytoplasmic Antibodies . . . . . . . . . . . . . . 476

80. Frequency of Arteriographic Abnormalities and Potential Clinical Manifestations of Arterial involvement in Takayasu’s Arteritis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 476

81. Most Common in Arteritis and Aneurysm . . . . . . . . . . . . 477

82. Vascular Pathology of Hypertension . . . . . . . . . . . . . . . . . 477

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83. Major Primary Glomerulonephritis . . . . . . . . . . . . . . . . . . 478

84. Causes of Nephritic Syndrome . . . . . . . . . . . . . . . . . . . . . 480

85. Types of Deposits in Different Types of GN . . . . . . . . . . . 481

86. Lupus Nephritis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 481

87. Genetic Causes of Non-Syndromal SRNS/FSGS . . . . . . . . 482

88. Summary of Renal Cystic Diseases . . . . . . . . . . . . . . . . . . 482

89. Types of Cirrhosis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 483

90. Patterns of injury in Drug- and toxin-induced Hepatic injury . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 483

91. Scheuer Classification for Grading and Staging of Chronic Hepatitis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 484

92. Stages of Chronic Hepatitis B infection . . . . . . . . . . . . . . . 484

93. Antinuclear Antibody (ANA) Patterns and Clinical Associations . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 484

94. Autoimmune Diseases . . . . . . . . . . . . . . . . . . . . . . . . . . . . 485

95. Types of Grafts . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 487

96. Graft-Versus-Host Disease (GVHD) . . . . . . . . . . . . . . . . . . 488

97. Clinical Grading of Acute GVHD . . . . . . . . . . . . . . . . . . . . . 489

98. Clinical Staging of Acute GVHD . . . . . . . . . . . . . . . . . . . . . 489

99. Bleeding and Clotting Disorders . . . . . . . . . . . . . . . . . . . . 489

100. Approach to A Patient With Bleeding Disorder . . . . . . . . 490

101. Different Tests of Bleeding/ Clotting Disorders . . . . . . . . 492

102. Reference Values of Common Tests of Hemostasis and Blood Coagulation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 492

103. Causes of Hemoglobinuria . . . . . . . . . . . . . . . . . . . . . . . . . 493

104. Diseases With Granulomatous inflammation . . . . . . . . . . 493

105. The Prion Diseases . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 493

106. Neurodegenerative Diseases Associated With Aggregated Proteins . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 494

107. Inherited Diseases of the Red Cell Membrane-Cytoskeleton . . . . . . . . . . . . . . . . . . . . . . . . . . 494

108. Types of Hereditary Spherocytosis . . . . . . . . . . . . . . . . . . 495

109. Diseases With Predominantly intravascular Hemolysis . . 495

110. Types of Microcytic Anemia . . . . . . . . . . . . . . . . . . . . . . . . 496

111. Causes of Macrocytic Anemia . . . . . . . . . . . . . . . . . . . . . . 497

112. Approach to Anemia . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 498

113. Biochemical Tests for the Diagnosis and Differentiation of Cobalamin and Folate Deficiencies . . . . . . . . . . . . . . . . . . 499

114. Causes of Pure Red Cell Aplasia . . . . . . . . . . . . . . . . . . . . . 500

115. WHO Classification of Chronic Myeloproliferative Disorders . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 500

116. Myocardial infarction Time of onset of Key Events in Ischemic Cardiac Myocytes . . . . . . . . . . . . . . . . . . . . . . . . 500

117. Evolution of Morphologic Changes in Myocardial infarction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 501

118. Enzymes Elevated in Myocardial infarction . . . . . . . . . . . 501

119. Transudate Vs. Exudate . . . . . . . . . . . . . . . . . . . . . . . . . . . 502

120. Conditions Associated With Abnormal Alkaline Phosphatase . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 502

121. Few Important Bodies in Medical Science . . . . . . . . . . . . 503

122. Types of Rosettes in Histopathology . . . . . . . . . . . . . . . . . 505

123. Intestinal Polyps . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 505

Appendix Forensic Medicine

1. Important Definitions of FMT . . . . . . . . . . . . . . . . . . . . . . 509

2. Titles Related to FMT . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 509

3. Various Declarations Adopted by WMA in Chronological Order . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 509

4. Types of Offence . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 510

5. Inquest . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 510

6. Summons or Subpoena . . . . . . . . . . . . . . . . . . . . . . . . . . . 510

7. Cross Examination . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 511

8. Indian Evidence Act (IEA) . . . . . . . . . . . . . . . . . . . . . . . . . 511

9. Criminal Procedure Code 1973 . . . . . . . . . . . . . . . . . . . . . 512

10. Indian Penal Code, 1860 (Act No. 45 of Year 1860) . . . . . 512

11. Prosessional Negligence Vs Misconduct . . . . . . . . . . . . . . 519

12. Types of Negligence (Malpraxis) . . . . . . . . . . . . . . . . . . . . 519

13. Defence/ Doctrine in Favour and Against A Doctor . . . . . 520

14. Professional Secrets and Previleged Communication . . . 520

15. Identification of Age . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 521

16. Identification of Race . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 523

17. Identification of Sex . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 524

18. DNA Fingerprinting . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 525

19. Tests Used for Detection of Blood . . . . . . . . . . . . . . . . . . . 526

20. Dactylography . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 527

21. Poroscopy . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 528

22. Autopsy Techniques . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 528

23. Signs of Death . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 529

24. Post Mortem Caloricity . . . . . . . . . . . . . . . . . . . . . . . . . . . 529

25. Post Mortem Changes . . . . . . . . . . . . . . . . . . . . . . . . . . . . 530

26. Adipocere Vs Mummification . . . . . . . . . . . . . . . . . . . . . . 531

27. Incised Wound . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 532

28. Types of Abrasions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 532

29. Contusion/Bruise . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 533

30. Laceration and Types . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 533

31. Difference Between incised, Lacerated and Stab Wounds . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 534

32. Antemortem Vs Postmortem injury . . . . . . . . . . . . . . . . . 535

33. Suicidal Vs Homicidal Wound . . . . . . . . . . . . . . . . . . . . . . 535

34. Types of Stab Wound on the Basis of Weapon Used . . . . 535

35. Types of Burn injuries . . . . . . . . . . . . . . . . . . . . . . . . . . . . 535

36. Corrosive injury . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 536

37. Pedestrian injuries . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 536

38. injuries Sustained by Vehicle Occupants . . . . . . . . . . . . . 537

39. Types of Blast injuries . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 538

40. Bullet Kinetics and injury . . . . . . . . . . . . . . . . . . . . . . . . . . 539

41. Ballistic Phenomenon . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 540

42. Types of Bullets in forensic Medicine . . . . . . . . . . . . . . . . 541

43. Types of Gun Powder . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 542

44. Gun Shot Residue . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 542

45. Classification of Firearms . . . . . . . . . . . . . . . . . . . . . . . . . . 543

46. Components of Gunshot and Its Effects . . . . . . . . . . . . . . 544

47. Bullet Wound . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 544

48. Shotgun Firearm injuries . . . . . . . . . . . . . . . . . . . . . . . . . . 545

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Contentsxiv

49. Shotgun Contact & Short Range (Comprehensive) . . . . . 546

50. Rifled Firearm . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 547

51. Clinical Effects of Hyperthermia on Body . . . . . . . . . . . . . 548

52. Physical Methods of torture/Corporal Punishment . . . . . 548

53. Diatom Test . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 549

54. Important Fractures in forensic . . . . . . . . . . . . . . . . . . . . . 549

55. Hanging . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 550

56. Signs/Tests for Live Birth . . . . . . . . . . . . . . . . . . . . . . . . . . 551

57. Natural Vs Criminal Abortion . . . . . . . . . . . . . . . . . . . . . . . 552

58. Toxicology . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 553

59. Specific Antidotes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 561

60. Poison Specific Coloured Findings . . . . . . . . . . . . . . . . . . . 562

61. Post Mortem Staining . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 563

62. Specific Odour of Poisons . . . . . . . . . . . . . . . . . . . . . . . . . 563

63. Gastric Lavage . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 564

64. Resemblence of Poisoning . . . . . . . . . . . . . . . . . . . . . . . . 564

65. Treatment and Prophylaxis of Opium & Alcohol Dependence Syndrome . . . . . . . . . . . . . . . . . . . . . . . . . . . 565

66. Preservatives Used in Poisoning . . . . . . . . . . . . . . . . . . . . 565

67. Special organ Preservation in Poisoning . . . . . . . . . . . . . . 565

68. Toxicological Examination . . . . . . . . . . . . . . . . . . . . . . . . . 566

69. Abortifacient Drugs . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 566

70. Activated Charcoal . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 566

71. Toxicology FAQ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 566

72. Muehrcke’s Line Vs Mee’s Line . . . . . . . . . . . . . . . . . . . . . 567

73. Pesticides Classification . . . . . . . . . . . . . . . . . . . . . . . . . . . 567

74. Narcotic and Psychotropic Drugs . . . . . . . . . . . . . . . . . . . 568

75. Date Rape Drugs . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 569

76. Classification of Snakes . . . . . . . . . . . . . . . . . . . . . . . . . . . 569

77. Fatal Dose of Venoms . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 569

78. Poisonous Vs Non Poisonous Snakes . . . . . . . . . . . . . . . . 570

79. First Aid Myths of Snake Bite . . . . . . . . . . . . . . . . . . . . . . . 570

80. First Aid “Do It Right” Protocol . . . . . . . . . . . . . . . . . . . . . 570

81. National Snake Bite Treatment Protocol (india) . . . . . . . . 571

82. Classification of Sexual offences . . . . . . . . . . . . . . . . . . . . 573

83. Paraphilias . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 573

84. Indian Medical Council Act, 1956 (102 of 1956) 30th December, 1956 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 574

85. MTP Act . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 574

86. Transplantation of Human organ Act 1994 . . . . . . . . . . . . 575

87. Street Names of Common Psychotropic Drugs . . . . . . . . 576

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Appendix for PGMEE (Volume 1)8

APPENDIX 7: DEVELOPMENT OF URINARY BLADDER

Embryologically, the trigone of the bladder is derived from the caudal end of mesonephric ducts, which is of mesodermal origin (the rest of the bladder is endodermal). In the female the mesonephric ducts regresses, causing the trigone to be less prominent, but still present. Since both the mesonephric ducts and ureters originate in the mesoderm, the mucosa of the bladder formed by incorporation of the ducts (the trigone of the bladder) is also mesodermal. With time, the mesodermal lining of the trigone is replaced by endodermal epithelium, so that finally the inside of the bladder is completely lined with endodermal epithelium.During the fourth to seventh weeks of development, the Cloaca divides into the urogenital sinus anteriorly and the anal canal posteriorly. Three portions of the urogenital sinus can be distinguished1. The upper and largest part is the urinary bladder.Initially, the bladder is continuous with the allantois, but when the lumen of

the allantois is obliterated, a thick fibrous cord, the Urachus, remains and connects the apex of the bladder with the umbilicus. In the adult, it is known as the median umbilical ligament.

2. The next part is a rather narrow canal, the pelvic part of the urogenital sinus, which in the male gives rise to the prostatic and membranous parts of the urethra.

3. The last part is the phallic part of the urogenital sinus. It is flattened from side to side, and as the genital tubercle grows, this part of the sinus will be pulled ventrally .

APPENDIX 8: DEVELOPMENT OF VAGINA

Ε Endoderm → primitive gut → cloaca → urogenital sinus and anorectal canal. Ε The sinovaginal bulb originates from urogenital sinus. Ε Distally sinovaginal bulb and proximally overgrowth of Mullerian duct at Mullerian tubercle results in formation of vaginal plate which on canalization forms upper and lower vagina respectively.

Ε The first and second portions of Mullerian duct forms the fimbriae and the fallopian tubes while distal segment forms the uterus and upper vagina.

Ε Distal most portion of sinovaginal bulb forms the Hymen.

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ANATOMY 17

APPENDIX 16: DEVELOPMENT OF THE VENOUS SYSTEM

Vitelline Veins(The proximal part of the left vitelline vein and distal part of right vitelline vein disappears)

Right vitelline Vein Hepatocardiac/Superior/terminal portion of the IVC, Superior mesenteric vein

Left vitelline Vein Proximal part disappearsThe anastomotic network around the duodenum develops into a single vessel, the portal vein

UMBILICAL VEINS: (The right umbilical vein and the part of the left between the liver and the sinus venosus degenerate)

Right umbilical vein Hepatic sinusoids (degenerates early in fetal life)

Left umbilical vein Hepatic sinusoidsLigamentum terescommunication between the left umbilical vein and the right hepatocardiac channel, the ductus venosus obliterates to form ligamentum venosum

Cardinal Veins

Common cardinal (Duct of Cuvier)

Right SVC

Left Oblique vein of left atrium& coronary sinus

Anterior cardinal Right SVC, internal jugular veins

Left Vanishes

Lt-Rt Anastomosis

Left brachiocephalic vein

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ANATOMY 27

APPENDIX 28: TYPES OF EPIPHYSIS

Epiphysis Definition/Function Example

Pressure epiphyses Takes part in transmission of weight Head of femur, condyles of tibia, lower end of radius

Traction epiphyses Provide attachment to more than 1 tendon Trochanter of femur, tubercles of humerus, mastoid process.

Atavistic epiphyses Phylogenetically an independent bone which in man becomes fused to another bone

Coracoid process of scapula, posterior tubercle of talus, ostrigonum.

Aberrant epiphyses Not always present Head of metacarpal, base of other metacarpal

APPENDIX 29: MUSCLE CELLS TYPES

Skeletal Cardiac Smooth

Nuclei Multinucleated, peripherally located

Single nuclei, Centrally located Single nuclei, Centrally located

Banding Actin and myosin form distinctive bands

Actin and myosin form distinctive bands

Actin and myosin; No distinctive bands

Z-disks Present Present Absent, cytoplasmic dense bodies are present

T tubules T tubules at A-I junction; triads present

T tubules at Z disk; diads present No T tubules; no triads

Cellular junctions No junctional complexes Intercalated disks Gap junctions

Neuromuscular junctions

Present Not present; contraction is intrinsic Not present; contraction is intrinsic, neural, or hormonal

Ca+ binding Troponin Troponin Calmodulin

Regeneration Limited; satellite cells None High

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APPENDIX 55: ANATOMY OF TONGUE

Parts Root, Tip, and Body, which has (a) a curved upper surface or dorsum, and (b) an inferior surface.

Dorsum The dorsum is divided into oral and pharyngeal parts. The inferior surface is confined to the oral part only. The dorsum of the tongue is convex in all directions. It is divided into:(a) An oral part or anterior two-thirds(b) A pharyngeal part or posterior one-third, by a faint V-shaped groove, the sulcus terminalis. The two limbs of the ‘V meet at a median pit, named the foramen caecum. They run laterally and forwards up to the palatoglossal arches. The foramen caecum represents the site from which the thyroid diverticulum grows down in the embryo.

Epiglottis

Palatoglossal arch

Midline groove of tongue

Palatine tonsil

Foliate papillae

Fungiform papilla

Palatopharyngeal arch

Termial sulcus

Dorsum of tongue

Lingual tonsil

Circumvallate papilla

Filiform papilla

Root The root is attached to the mandible and soft palate above, and to the hyoid bone below. Because of these attachments we are not able to swallow the tongue itself. In between the two bones, it is related to the geniohyoid and mylohyoid muscles.

Tip The tip of the tongue forms the anterior free end which, at rest, lies behind the upper incisor teeth.

Papillae of the tongue

These are projections of mucous membrane or corium which give the anterior two-thirds of the tongue its characteristic roughness. These are of the following three types

Vallate or circumvallate papillae

They are large in size 1-2 mm in diameter and are 8-12 in number. They are situated immediately in front of the sulcus terminalis.

Fungiform papillae

The fungiform papillae are numerous near the tip and margins of the tongue, but some of them are also scattered over the dorsum

Filiform papillae The filiform papillae or conical papillae cover the presulcal area of the dorsum of the tongue, and give it a characteristic velvety appearance. They are the smallest and most numerous of the lingual papillae. Each is pointed and covered with keratin; the apex is often split into filamentous processes

Artery, Vein and Lymphatics of Tongue

Arterial supply It is chiefly derived from the lingual artery, a branch of the external carotid artery. The root of the tongue is also supplied by the tonsillar and ascending pharyngeal arteries

Venous drainage The arrangement of the vena comitantes veins of the tongue is variable. Two venae comitantes accompany the lingual artery, and one vena comitantes accompanies the hypoglossal nerve. The deep lingual vein is the largest and principal vein of the tongue. It is visible on the inferior surface of the tongue. It runs backwards and crosses the genioglossus and the hyoglossus below the hypoglossal nerve. These veins unite at the posterior border of the hyoglossus to form the lingual vein which ends either in the common facial vein or in the internal jugular vein.

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APPENDIX 31: ANTICOAGULANT MECHANISMS

Physiological anticoagulation mechanisms act to reduce thrombin production or reduce the effects of thrombin

Antithrombin Antithrombin (AT), previously known as AT III is the main inhibitor of thrombin. It is a serine protease inhibitor, which binds and inactivates thrombin, factor IXa, Xa, XIa and XIIa. The enzymatic activity of AT is enhanced in the presence of heparin. However, the plasma concentration of heparin is low and does not contribute significantly to the in vivo activation of AT. AT is activated by binding of heparin sulphate present on endothelial cell surface. Other thrombin inhibitors are heparin cofactor II, α2 macroglobulin and α1-antitrypsin.

Tissue factor plasminogen inhibitor

It is a polypeptide produced by endothelial cells. It acts as a natural inhibitor of the extrinsic pathway by inhibiting TF-VIIa complex. Protein S enhances the interaction of factor Xa in the presence of calcium and phospholipids.

Protein C pathway The propagation phase of the coagulation is inhibited by the Protein C pathway that primarily consist of four key elements:

Ε Protein C is a serine protease with potent anticoagulant, profibrinolytic and anti-inflammatory properties. It is activated by thrombin to form activated protein C (APC) and acts by inhibiting activated factors V and VIII (with Protein S and phospholipids acting as cofactors)

Ε Thrombomodulin - A transmembrane receptor on the endothelial cells, it prevents the formation of the clot in the undamaged endothelium by binding to the thrombin

Ε Endothelial protein C receptor is another transmembrane receptor that helps in the activation of Protein C

Ε Protein S is a vitamin K-dependent glycoprotein, synthesised by endothelial cells and hepatocytes. It exists in plasma as both free (40%) and bound (60%) forms (bound to C4b-binding protein). The anticoagulant activity is by virtue of free form while the bound form acts as an inhibitor of the complement system and is up regulated in the inflammatory states, which reduce the Protein S levels thus resulting in procoagulant state. It functions as a cofactor to APC in the inactivation of FVa and FVIIIa. It also causes direct reversible inhibition of the prothrombinase (FVa-FXa) complex

Protein Z dependent protease inhibitor/protein Z (PZI)

It is a recently described component of the anticoagulant system that is produced in the liver. It inhibits Factor Xa in reaction requiring PZ and calcium.

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PHYSIOLOGY 129

Insulin Galanin (GAL)

Cholecystokinin (CCK) Amino acids (glutamate and γ-aminobutyric acid)

Glucagon-like peptide (GLP) Cortisol

Cocaine- and amphetamine-regulated transcript (CART) Ghrelin

Peptide YY (PYY) Endocannabinoids

APPENDIX 55: AUTONOMIC NERVOUS SYSTEMThe autonomic nervous system (ANS) is the part of the nervous system that is responsible for homeostasis. Except for skeletal muscle, which gets its innervation from the somatomotor nervous system, innervation to all other organs is supplied by the ANS. Nerve terminals are located in smooth muscle (eg, blood vessels, gut wall, urinary bladder), cardiac muscle, and glands (eg, sweat glands, salivary glands). Although survival is possible without an ANS, the ability to adapt to environmental stressors and other challenges is severely compromised. Controls vegetative functions, hence also called as vegetative nervous system: Temperature, Digestion, Heart rate, Respiration, blood pressure, metabolism The classic definition of the ANS is the preganglionic and postganglionic neurons within the sympathetic and parasympathetic divisionsThe peripheral motor portions of the ANS are made up of two neurons: 1. Preganglionic : The cell bodies of the preganglionic neurons are located in the intermediolateral column (IML) of the spinal

cord and in motor nuclei of some cranial nerves. In contrast to the large diameter and rapidly conducting ALPHA motor neurons, preganglionic axons are small-diameter, myelinated, relatively slowly conducting Beta fibers. A preganglionic axon diverges to an average of eight or nine postganglionic neurons

2. Postganglionic neurons : The axons of the postganglionic neurons are mostly unmyelinated C fibers and terminate on the visceral effectors.

Autonomic nervous system

Parasympathetic nervous system

Smpathetic nervous system

The ANS has two major divisions: the sympathetic and parasympathetic nervous systems. In addition, the ANS includes the enteric nervous system within the gastrointestinal tract

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PHYSIOLOGY 133

APPENDIX 58: HYPOTHALAMIC NUCLEIRegion Area Nucleus Function

Anterior Medial Preoptic nucleus Thermoregulation/ Heat loss centre

Supraoptic nucleus (SO) Vasopressin (ADH) release

Paraventricular nucleus (PV) CRH release Oxytocin and to a lesser extent antidiuretic hormone

Anterior hypothalamic nucleus (AH)

Thermoregulation/ Heat loss centre (set point comparison) Heat loss if core temp > set point

Suprachiasmatic nucleus Circadian rhythms

Part of supraoptic nucleus (SO) Vasopressin release

Tuberal Medial Dorsomedial hypothalamic nucleus (DM)

Blood Pressure, Heart Rate, GI stimulation

Ventromedial nucleus (VM) satiety centre(controls eating)lesion causes voracious appetite

Arcuate nucleus (AR)/ Infundibular nucleus/ Periventricular nucleus

Endocrine function (releasing hormones)- controls Adenohypophysis

Lateral Lateral hypothalamic area Feeding centre (thirst and hunger)-lesion causes anorexia

Posterior Medial Mammillary nuclei (part of mammillary bodies) (MB)

Memory, Feeding reflex

Posterior nucleus (PN) Increase blood pressure Pupillary dilation Thermoregulation (generates shivering, if core temp <set point)

Note: Paraventricular nucleus is not to be confused with periventricular nucleus.

APPENDIX 59: ASCENDING (SENSORY) TRACTS OF SPINAL CORD

Situation Tract From 2nd order neuron To Crossing over Function

Anterior column

(Anterior white funiculus)

Anterior spinothalamic tract (With lateral spinothalamic tract, forms spinal lemnisus)

Axon of 1st order neuron dorsal root ganglia and terminate in medial part of dorsal horn (1st relay stn)

Axon Begins in Nucleus propriusTerminates on 3rd order neurons in Ventral Posterior Nucleus of thalamus (VPN)

3rd order neuron from posterior limb of internal capsule to post central gyrus (sensory)

Some fibres Ascend several segments before crossing overMostly crossed, some uncrossed

Crude touch sensation

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PHYSIOLOGY 173

APPENDIX 96: AUDITORY PATHWAYFigure shows the major auditory pathways. It shows that nerve fibers from the spiral ganglion of corti enter the dorsal and ventral cochlear nuclei located in the upper part of the medulla. At this point, all the fibers synapse, and second-order neurons pass mainly to the opposite side of the brain stem to terminate in the superior olivary nucleus. A few second order fibers also pass to the superior olivary nucleus on the same side. From the superior olivary nucleus,the auditory pathway passes upward through the lateral lemniscus. Some of the fibers terminate in the nucleus of the lateral lemniscus, but many bypass this nucleus and travel on to the inferior colliculus, where all or almost all the auditory fibers synapse. From there, the pathway passes to the medial geniculate nucleus, where all the fibers do synapse. Finally, the pathway proceeds by way of the auditory radiation to the auditory cortex, located mainly in the superior gyrus of the temporal lobe.

Auditory pathway Mnemonic: E-COLI-MA1. Eighth nerve2. Cochlear nucleus3. Superior olivary complex4. Lateral lemniscus5. Inferior colliculus6. Medial geniculate body7. Auditory Cortex (Brodmann’s area 41)

APPENDIX 97: OLFACTIONOlfactory Mucous Membrane

The olfactory receptor cells are located in a specialized portion of the nasal mucosa, the yellowish pigmented olfactory mucous membrane. The olfactory membrane lies in the superior part of each nostril. Medially, the olfactory membrane folds downward along the surface of the superior septum; laterally, it folds over the superior turbinate and even over a small portion of the upper surface of the middle turbinate. Olfactory mucous membrane is said to be the place in the body where the nervous system is closest to the external world

1. Macrosmatic animals: In dogs and other animals in which the sense of smell is highly developed, the area covered by olfactory membrane is large

2. Microsmatic animals: In humans area covered by olfactory membrane is small hence sense of smell is less developed. In humans, it covers an area of 5 cm2 in the roof of the nasal cavity near the septum (2.4 cm2 in each nostril)

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Appendix for PGMEE (Volume 1)188

APPENDIX 11: OXYGEN BINDING MECHANISM OF HEMOGLOBIN

The tetrameric structure of hemoglobin permits cooperative interactions that are central to its function. For example, 2,3-bisphosphoglycerate (BPG) promotes the efficient release of O2 by stabilizing the quaternary structure of deoxyhemoglobin.”

Ε A low PO2 in peripheral tissues promotes the synthesis in erythrocytes of 2,3-bisphosphoglycerate (BPG) from the glycolytic intermediate 1,3-bisphosphoglycerate.

Ε The hemoglobin tetramer binds one molecule of BPG in the central cavity formed by its four subunits. Ε However, the space between the H helices of the chains lining the cavity is sufficiently wide to accommodate BPG only when hemoglobin is in the T state.

Ε BPG forms salt bridges with the terminal amino groups of both chains via Val NA1 and with Lys EF6 and His H21. Ε BPG therefore stabilizes deoxygenated (T state) hemoglobin by forming additional salt bridges that must be broken prior to conversion to the R state.

Ε Residue H21 of the g subunit of fetal hemoglobin (HbF) is Ser rather than His. Since Ser cannot form a salt bridge, BPG binds more weakly to HbF than to HbA. The lower stabilization afforded to the T state by BPG accounts for HbF having a higher affinity for O2 than HbA.

Ε Deoxyhemoglobin binds one proton for every two O2 molecules released, contributing significantly to the buffering capacity of blood.

Ε The somewhat lower pH of peripheral tissues, aided by carbamation, stabilizes the T state and thus enhances the delivery of O2.

“Heme iron forms a covalent bond with the imidazole nitrogen of the “proximal” histidine at F8.” Ε The binding of oxygen to the iron molecule causes the hemoglobin molecule to undergo conformational changes that affect the binding of oxygen to other heme sites.

Ε The mechanism for this property can be explained in part by the interactions in the heme pocket. Ε The two histidines of globin (E7, F8) are located immediately above and below iron, which is in the plane of the pyrrole ring in oxyhemoglobin. (see figure below)

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Appendix for PGMEE (Volume 1)190

Figure (B) The iron atom moves into the plane of the heme on oxygenation. Histidine F8 and its associated residues are pulled along with the iron atom

Ε The binding of the first O2 molecule to deoxy Hb shifts the heme iron toward the plane of the heme ring from a position about 0.6 nm beyond it.

Ε This motion is transmitted to the proximal (F8) histidine and to the residues attached thereto, which in turn causes the rupture of salt bridges between the carboxyl terminal residues of all four subunits.

Ε As a consequence, one pair of alpha/beta subunits rotates 15 degrees with respect to the other, compacting the tetramer. Ε Profound changes in secondary, tertiary, and quaternary structure accompany the high-affinity O2-induced transition of hemoglobin from the low-affinity T (taut) state to the high-affinity R (relaxed) state.

Ε These changes significantly increase the affinity of the remaining unoxygenated hemes for O2, as subsequent binding events require the rupture of fewer salt bridges.

Ε The terms T and R also are used to refer to the low-affinity and high-affinity conformations of allosteric enzymes, respectively.

Ε The overall conformational changes to hemoglobin appear to be the greatest after three molecules of O 2 have been added. Ε In general, proteins that undergo an allosteric change from the tense to a relaxed state are better able to interact with substrate in the relaxed state

APPENDIX 12: SHIFT OF OXYGEN DISSOCIATION CURVE

Right shift ( - CADET turns to Right), Decrease affinity, increase P50,

Left shift, increase affinity, Decrease P50

1. C- Increase CO2

2. A- Acid (Low pH), Chronic anemia (due to increased 2,3 BPG)3. D- Increased 2,3-Diphosphoglycerate (2,3 DPG, AKA 2,3-Bisphosphoglycerate, 2,3

BPG) 4. E- Exercise5. T- Increase in body temperature

1. Decrease CO2

2. Alkalosis (High pH)3. Decreased 2,3 DGP4. Decreased body temperature5. High Fetal hemoglobin6. Carboxyhemoglobin7. Methemoglobinemia

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BIOCHEMISTRY 191

APPENDIX 13: STEPS OF HEME/PORPHYRIN RING SYNTHESIS

Enzyme Location Substrate Product Porphyria Clinical Lab test

ALA synthase (Rate limiting)

Mitochon-drion

Glycine, succi-nyl CoA

D-Amino-levulinic acid

X linked Sidero-blastic anemia

Anemia ↓RBC count, ↓Hb

ALA dehydratase (Zinc containing, Sensitive to lead poisoning)

Cytosol D-Amino-levulinic acid

Porphobilino-gen

ALA-Dehydratase deficiency

Abdominal pain, neuropsychiatric symptoms

↑Urinary ALA and copropor-phyrin III

PBG deaminase/ HMB synthase/ Uroporphy-rinogen I synthase

Cytosol Porphobilino-gen

Hydroxymethyl bilane

Acute intermit-tent porphyria

Abdominal pain, neuropsychiatric symptoms

↑Urinary ALA and PBG

Uroporphyrinogen III synthase

Cytosol Hydroxymeth-ylbilane

Uroporphy-rinogen III

Congenital erythropoietic porphyria

No photosensi-tivity

↑Urinary, fecal & RBC uropor-phyrin I

Uroporphyrinogen III decarboxylase

Cytosol Uroporphyrin-ogen III

Coproporphy-rinogen III

Porphyria cuta-nea tarda

Photosensitivity ↑Urinary uro-porphyrin I

Coproporphyrinogen III oxidase

Mitochon-drion

Coproporphy-rinogen III

Protoporphy-rinogen IX

Coproporphyria Photosensitivity, abdominal pain, neuropsychiatric symptoms

↑Urinary ALA, PBG, & copro-porphyrin III & fecal copropor-phyrin III

Protoporphyrinogen oxidase

Mitochon-drion

Protoporphy-rinogen IX

Protoporphy-rin IX

Variegate por-phyria

Photosensitivity, abdominal pain, neuropsychiatric symptoms

↑Urinary ALA, PBG, & copro-porphyrin III & fecal protopor-phyrin IX

Ferrochelatase (Sen-sitive to Lead poison-ing)

Mitochon-drion

Protoporphy-rin IX

Heme Erythropoietic protoporphyria

Photosensitivity ↑Fecal & RBC protoporphyrin IX

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BIOCHEMISTRY 197

APPENDIX 18: METABOLIC PATHWAYS

Anabolic pathways Are those involved in the synthesis of larger and more complex compounds from smaller precursors—Anabolic pathways are endothermic. Anabolic reactions require an input of energy, generally in the form of the phosphoryl group transfer potential of ATP and the reducing power of NADH, NADPH, and FADH2

Synthesis of protein from amino acids and the synthesis of reserves of triacylglycerol and glycogen.

Catabolic pathways Are involved in the breakdown of larger molecules, commonly involving oxidative reactions; they are exothermic, producing reducing equivalents, and, mainly via the respiratory chain, ATP.

Amphibolic pathways which occur at the “crossroads” of metabolism, acting as links between the anabolic and catabolic pathwaysIn aerobic organisms, the citric acid cycle is an amphibolic pathway, one that serves in both catabolic and anabolic processes.

eg, the citric acid (TCA) cycle.

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APPENDIX 2: DOSE RESPONSE CURVE

Simple dose response curve hyperbolic in shape while log DRC is sigmoid in shape. There are three important parameters- potency, efficacy and slope

Potency It is the measure of the amount of drug needed to produce the response. Drug producing same response at lower dose is more potent (in DRC more the dose response curve towards left, greater is the potency i.e. A > B > C > D)

Efficacy It is the maximum effect produced by a drug. It is clinically more important than potency. (On DRC- More is the peak of curve greater is its efficacy i.e. A>B>C>D)

Slope Steeper is the slope more are the chances of getting the response drastically with increase in dose. I.e. steep DRC means narrow therapeutic index

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APPENDIX 45: CALCINEURIN INHIBITORS

Mechanism of action

These drugs bind to an immunophilin (cyclophilin for cyclosporine or FKBP-12 for tacrolimus), resulting in subsequent interaction with calcineurin to block its phosphatase activity. Calcineurin is required for movement of a component of the nuclear factor of activated T lymphocytes (NFAT) into the nucleus NFAT, in turn, is required to induce a number of cytokine genes, including that for interleukin-2 (IL-2), a prototypic T-cell growth and differentiation factor.

Classification Systemic Topical

Cyclosporine Tacrolimus

TacrolimusPimecrolimus

Cyclosporine Ε Produced by the fungus species Beauveria nivea Ε Can be administered intravenously or orally

Pharmacokinetics: Cyclosporine is extensively metabolized in the liver by CYP3A and to a lesser degree by the gastrointestinal (GI) tract and kidneys. Cyclosporine and its metabolites are excreted principally through the bile into the feces. Cyclosporine also is excreted in human milk. In the presence of hepatic dysfunction, dosage adjustments are required. No adjustments generally are necessary for dialysis or renal failure patients.Indications :

Ε Cyclosporine is FDA-approved for the treatment of psoriasis. Other cutaneous disorders that typically respond well to cyclosporine are atopic dermatitis, alopecia areata, epidermolysis bullosa acquisita, pemphigus vulgaris, bullous pemphigoid, lichen planus, and pyoderma gangrenosum.

Ε Clinical indications for cyclosporine are kidney, liver, heart, and other organ transplantation; rheumatoid arthritis.

Side effects Ε The principal adverse reactions to cyclosporine therapy are renal dysfunction, tremor, hirsutism, hypertension, hyperlipidemia, and gum hyperplasia

Ε Hyperuricemia may lead to worsening of gout, increased P-glycoprotein activity, and hypercholesterolemia. Ε Nephrotoxicity occurs in the majority of patients treated and is the major indication for cessation or modification of therapy.

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APPENDIX 46: FDA APPROVED MONOCLONAL ANTIBODIES & TARGETED THERAPIES

Antibody Type Target Indication (What it’s approved to treat)

Abciximab chimeric Inhibition of glycoprotein IIb/IIIa High risk angioplasty

Adalimumab Human Inhibition of TNF-α signalling Inflammatory diseases –mostly autoimmune disorders like rheumatoid arthritis, psoriatic arthritis, Crohn’s disease

Alemtuzumab humanized CD52 Chronic lymphocytic leukaemia, Tcell lymphoma

Basiliximab chimeric IL-2Rα receptor (CD25) Transplant rejection

Bevacizumab humanized Vascular endothelial growth factor (VEGF)

Metastatic colorectal cancer, nonsmall cell lung cancer, metastatic breast bancer

Cetuximab chimeric Epidermal growth factor receptor (EGFR)

Colorectal cancer, Head and neck cancer

Certolizumab pegol

humanized Inhibition of TNF-α signalling Crohn’s disease, rheumatoid arthritis

Daclizumab humanized IL-2Rα receptor (CD25) Transplant rejection

Dasatinib Targeted bcr-abl, src family, c-kit, EPHA2, PDGFR-β

CML, Ph+ ALL

Erlotinib Targeted EGFR Non–small cell lung cancer

Eculizumab humanized Complement system protein C5 Paroxysmal nocturnal hemoglobinuria

Efalizumab humanized CD11a Psoriasis

Gemtuzumab humanized CD33 Acute myelogenous leukaemia (with calicheamicin)

Golimumab humanized TNFα Rheumatoid & psoriatic arthritis, active ankylosing spondylitis

Imatinib Targeted c-kit, bcr-abl, PDGFR CML, GIST

Ibritumomab tiuxetan

Murine CD20 Non-Hodgkin lymphoma (with yttrium-90 or indium-111)

Infliximab chimeric Inhibition of TNF-α signalling Several autoimmune disorders like Crohn’s disease

Lapatinib Targeted EGFR and HER2 Breast cancer

Muromonab-CD3

Murine T cell CD3 Receptor Transplant rejection

Natalizumab humanized Alpha-4 (α4) integrin, Multiple sclerosis and Crohn’s disease

Omalizumab humanized Immunoglobulin E (IgE) Mainly allergy-related asthma

Palivizumab humanized An epitope of the RSV F protein Respiratory Syncytial Virus

Panitumumab Human Epidermal growth factor receptor Metastatic colorectal carcinoma

Ranibizumab humanized Vascular endothelial growth factor A (VEGF-A)

Macular degeneration

Rituximab chimeric CD20 Non-Hodgkin lymphoma

Sunitinib Targeted second-generation receptor tyrosine kinase inhibitors

RCC, Imatinib resistant GIST, Progressive GIST, progressive well-differentiated pancreatic neuroendocrine tumors (pNET)

Sorafenib Targeted Raf, PDGF, VEGFR, c-kit RCC

Temsirolimus Targeted mTOR RCC

Tositumomab Murine CD20 Non-Hodgkin lymphoma

Trastuzumab (Herceptin)

humanized ErbB2/HER2 Breast cancer

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Footnote: Anti diabetic Drugs to be given in subcutaneous route:

Ε Insulin

Ε GLP-1 analogue: Exenadide, Liraglutide

Ε Amylin analogue: Pramlintide

Used both in Type 1 & Type 2 diabetes Ε Insulin

Ε Amylin analogue: Pramlintide

Ε α–Glucosidase inhibitors: Acarbose

APPENDIX 55: INSULINS

Highly purified mono-component insulin

Porcine Actrapid- Regular Short acting

Porcine Monotard- Lente Intermediate acting

Porcine Insulatard- NPH

Porcine Mixtard 30% regular, 70% Isophane

Human insulin Human Actrapid- Regular Short acting

Human Monotard- Lente Intermediate acting

Human Insulatard- NPH

Human Mixtard 30% regular, 70% Isophane

Insulin analogues Insulin Lispro Insulin aspart Insulin glulisine

Ultra short acting

Insulin glargine Long acting

70% large particle, insoluble, long

acting crystalline (Ultralente)

30% small particle, short acting, amorphous, (Semi-

lente)

Intermediate acting Lente insulin

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MICROBIOLOGY 349

APPENDIX 27: PHASES OF THE MICROBIAL GROWTH CURVEThe phases of the bacterial growth curve shown in Figure are reflections of the events in a population of cells, not in individual cells (batch culture).

Phase Growth Rate

Comments

Lag Zero Ε Represents a period during which the cells, depleted of metabolites and enzymes as the result of the unfavourable conditions that existed at the end of their previous culture history, adapt to their new environment.

Ε Enzymes and intermediates are formed and accumulate until they are present in concentrations that permit growth to resume.

Ε If the cells are taken from an entirely different medium, it often happens that they are genetically incapable of growth in the new medium. In such cases a long lag may occur, representing the period necessary for a few mutants in the inoculums to multiply sufficiently for a net increase in cell number to be apparent.

Exponential Constant Ε The cells are in a steady state. Ε New cell material is being synthesized at a constant rate, but the new material is itself catalytic, and the mass increases in an exponential manner.

Ε This continues until one of two things happens: either one or more nutrients in the medium become exhausted, or toxic metabolic products accumulate and inhibit growth.

Ε For aerobic organisms, the nutrient that becomes limiting is usually oxygen. Ε When the cell concentration exceeds about 1 x 107/mL (in the case of bacteria), the growth rate will decrease unless oxygen is forced into the medium by agitation or by bubbling in air. When the bacterial concentration reaches 4–5 x 109/mL, the rate of oxygen diffusion cannot meet the demand even in an aerated medium, and growth is progressively slowed

Maximum stationary

Zero Ε Eventually, the exhaustion of nutrients or the accumulation of toxic products causes growth to cease completely.

Ε In most cases, however, cell turnover takes place in the stationary phase. Ε There is a slow loss of cells through death, which is just balanced by the formation of new cells through growth and division. When this occurs, the total cell count slowly increases although the viable count stays constant.

Decline Negative (death)

Ε After a period of time in the stationary phase, which varies with the organism and with the culture conditions, the death rate increases until it reaches a steady level.

Ε In most cases the rate of cell death is much slower than that of exponential growth. Ε Frequently, after the majority of cells have died, the death rate decreases drastically, so that a small number of survivors may persist for months or even years.

Ε This persistence may in some cases reflect cell turnover, a few cells growing at the expense of nutrients released from cells that die and lyse

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MICROBIOLOGY 357

APPENDIX 42: EXOTOXIN VS ENDOTOXINExotoxin Endotoxin

Secreted by

-Secreted by bacteria.-Are present in gram-positive & some gram negative bacteria (ie. Shiga’s dysentery, Bacillus, ETEC, Vibrio, Pertussis & Pseudomonas)

-Endotoxin is a component of the cell wall-Are present only in gram-negative bacteria

Chemistry Polypeptide LipopolysaccharideLocation of genes Plasmid or bacteriophage Bacterial chromosomeToxicity High Low Clinical effects Various effects Fever, shockMode of action Various modes Includes TNF and interleukin-1Antigenicity Induces high-titer antibodies called antitoxins Poorly antigenicVaccines Toxoids used as vaccines No toxoids formed and no vaccine availableHeat stability Destroyed rapidly at 60°C (except staphylococcal enterotoxin) Stable at 100°C for 1 hourTypical diseases Tetanus, botulism, diphtheria Meningococcemia, sepsis by gram-negative

rods

APPENDIX 43: CHARACTERISTIC OF DIFFERENT TOXINSToxins Mechanism of Action

Strychnine Ε Post-synaptic inhibition of Neurotransmitter Glycine in Spinal cord. Ε Acts on Antr.horn cell of spinal cord & inhibit post synaptic potential leading to release excitation.

Botulinum Ε During the growth of C botulinum and during autolysis of the bacteria, toxin is liberated into the environment.

Ε Seven antigenic varieties of toxin (A to G) are known. Ε Types A, B, and E (and occasionally F) are the principal causes of human illness. Types A and B have been associated with a variety of foods and type E predominantly with fish products. Type C produces limberneck in birds; type D causes botulism in mammalsother than humans.

Ε Botulinum toxin is absorbed from the gut and binds to receptors of presynaptic membranes of motor neurons of the peripheral nervous system and cranial nerves.

Ε Although all botulinum toxins have different molecular targets, they have same mechanism of action. Proteolysis by the light chain of botulinum toxin of either synaptobrevin, syntaxin, or SNAP-25 in the neurons inhibits the release of acetylcholine at the synapse of peripheral nerves, resulting in lack of muscle contraction and paralysis.

Ε The SNARE proteins are synaptobrevin, SNAP 25, and syntaxin. The toxins of C botulinum types A and E cleave the 25,000-MW SNAP-25. Type B toxin cleaves synaptobrevin.

Ε C botulinum toxins are among the most toxic substances known: The lethal dose for a human is probably about 1-2 µg. The toxins are destroyed by heating for 20 minutes at 100°C.

Teatanus Ε Tetanospasmin toxin inhibit presynaptic release of Neurotransmitter Glycin & GABA in CNS. Ε Toxins acts on Moter end plate, Spinal cord, Brain & Sympathetic nervous system.

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APPENDIX 77: PRIONS Ε Prions are infectious particles composed entirely of protein. They have no DNA or RNA. Prion’s are unusually resistant to physical and chemical agents such as heat, irradiation and formalin. Therefore incineration is recommended.

Ε Prions may have incubation periods of years before clinical manifestations of the infections become evident Ε They cause diseases such as Creutzfeldt-Jakob disease and kuru in humans and mad cow disease and scrapie in animals. These diseases are called transmissible spongiform encephalopathies. The term spongiform refers to the sponge-like appearance of the brain seen in these diseases. The holes of the sponge are vacuoles resulting from dead neurons.

Ε Prion proteins are encoded by a cellular gene. When these proteins are in the normal, alpha-helix configuration, they are nonpathogenic, but when their configuration changes to a beta-pleated sheet, they aggregate into filaments, which disrupts neuronal function and results in the symptoms of disease.

Ε Prions are unusually resistant to standard means of inactivation. They are resistant to treatment with formaldehyde (3.7%), urea (8 M), dry heat, boiling, ethanol (50%), proteases, deoxycholate (5%), and ionizing radiation. However, they are sensitive to phenol (90%), household bleach, ether, NaOH (2 N), strong detergents (10% sodium dodecyl sulfate), and autoclaving (1 hour, 121 °C). Guanidine thiocyanate is highly effective in decontaminating medical supplies and instruments.

Ε Because they are normal human proteins, they do not elicit an inflammatory response or an antibody response/ Immune response in humans

Comparison of Prions and Conventional VirusesFeature Prions Conventional Viruses

Particle contains nucleic acid No YesParticle contains protein Yes, encoded by cellular genes Yes, encoded by viral genesInactivated rapidly by UV light or heat No YesAppearance in electron microscope Filamentous rods (amyloid-like) Icosahedral or helical symmetryInfection induces antibody No YesInfection induces inflammation No Yes

APPENDIX 78: VIRAL INCLUSION BODIESIntra cytoplasmic Acidophilic Negri bodies Rabies

Guarnieri bodies Variola (small pox), vacciniaBollinger bodies FowlpoxHenderson Peterson bodies Molluscum contagiosumPaschen Small pox

Basophilic Halber staedtler prowazek (HD Body)

Chlamydia trachomatis

Levinthal cole lillie (LCL body) Chlamydia psittaci Intra nuclear Acidophilic Cowdry type A Herpes, chicken pox, yellow fever

Torres bodies Yellow feverCowdry type B Polio virus

Basophilic Cowdry type B AdenovirusCowdry type A/Owl’s eye CMV (Owl’s eye inclusion body with

surrounding halo and multiple indistinct cytoplasmic, basophilic inclusions)

Both Intra cytoplasmic and Intra nuclear Warthin finkeldey Measles

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MICROBIOLOGY 379

HHV-2/ HSV-2 Sacral ganglia Mostly below waist lesions Ε Genital herpes Ε Aseptic meningitis Ε Neonatal infections

HHV-3/ Varicella Zoster Virus Sensory ganglia Chicken pox, ZosterHHV-4 / Ebstein Barr Virus Lymphoid tissue Infectious Mononucleosis, Burkitt’s lymphomaHHV-5/ Cyto Megalo Virus Salivary glands,

KidneyPetechiae, Hepatosplenomegaly & jaundice (m.c), CMV mononucleosis, Haemorrhagic retinitis in Immunocompromised pts, intrauterine infection (m.c cause), complicates organ transplant (m.c pathogen), pneumonia in transplant pts

HHV-6/ Human B cell Lymphotropic virus

Lymphoid tissue Roseola infantum/ 6th disease/ Exanthema subitum, Focal Encephalitis

HHV-7/ R K virus Lymphoid tissueHHV- 8 Lymphoid tissue Kaposi’s sarcoma

APPENDIX 82: CLINICAL AND EPIDEMIOLOGIC FEATURES OF VIRAL HEPATITISFeature HAV HBV HCV HDV HEV

Family Picornaviridae Hepadnaviridae Flaviviridae Unclassified UnclassifiedGenus Hepatovirus Orthohepadnavirus Hepacivirus Deltavirus Hepevirus Virion 27 nm,

icosahedral42 nm, spherical 60 nm, spherical 35 nm, spherical 30–32 nm,

icosahedralEnvelope No Yes (HBsAg) Yes Yes (HBsAg) No Genome ssRNA dsDNA ssRNA ssRNA ssRNAStability Heat & acid

stableAcid-sensitive Ether-sensitive,

acid-sensitiveAcid-sensitive Heat-stable

Prevalence High High Moderate Low, regional RegionalIncubation (days) 15–45, mean 30 30–180, mean 60–90 15–160, mean 50 30–180, mean 60–90 14–60, mean 40Onset Acute Insidious or acute Insidious Insidious or acute AcuteAge preference Children, young

adults Young adults (sexual and percutaneous), babies, toddlers

Any age, but more common in adults

Any age (similar to HBV)

Young adults (20–40 years)

TransmissionFecal-oral +++ – – – +++Percutaneous Unusual +++ (MC mode of

transmission)+++ +++ –

Perinatal – +++ ± + –Sexual ± ++ ± ++ –ClinicalSeverity Mild Occasionally severe Moderate Occasionally severe MildFulminant 0.1% 0.1–1% (most common,

>50% of all cases of viral fulminant hepatitis)

0.1% 5–20% (highest chances of progression to fulminant hepatitis)

1–2%

Progression to chronicity

None (HAV remains self limited & does not progress to chronic liver disease.

Occasional (1–10%) (90% of neonates)

Common (>50% to upto 85%)

Common (<5% coinfection, 80% upon super infection)

None

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MICROBIOLOGY 385

APPENDIX 90: ANTIVIRAL CHEMOTHERAPY AND CHEMOPROPHYLAXISInfection Drug Route Dosage Comment

Influenza A and B: Treatment

Oseltamivir Oral Adults: 75 mg bid x 5 d Children 1–12 years: 30–75 mg bid, depending on weight,a x 5 d

Oseltamivir’s side effects of nausea and vomiting can be reduced in frequency by drug administration with food. Zanamivir may exacerbate bronchospasm in patients with asthma. Amantadine and rimantadine are not recommended for routine use unless antiviral susceptibilities are known because of widespread resistance in A/H3N2 viruses since 2005–2006 and in pandemic A/H1N1 viruses in 2009–2010.

Zanamivir Inhaled orally

Adults and children >7 years: 10 mg bid x 5 d

Amantadine

Oral Adults: 100 mg qd or bid x 5–7 d Children 1–9 years: 5 mg/kg per day (max, 150 mg/d) x 5–7 d

Rimantadine

Oral 100 mg qd or bid x 5–7 d in adults

Influenza A and B: Prophylaxis

Oseltamivir Oral Adults: 75 mg/d Children >1 year: 30–75 mg/d, depending on weight

Prophylaxis must be continued for the duration of exposure and can be administered simultaneously with inactivated vaccine. Unless the sensitivity of isolates is known, neither amantadine nor rimantadine is currently recommended for prophylaxis or therapy.

Zanamivir Inhaled orally

Adults and children >5 years: 10 mg/d

Amantadine or rimantadine

Oral Adults: 200 mg/d Children 1–9 years: 5 mg/kg per day (maximum, 150 mg/d)

RSV infection Ribavirin Small-particle aerosol

Administered 12–18 h/d from reservoir containing 20 mg/mL x 3–6 d

Use of ribavirin is to be “considered” for treatment of infants and young children hospitalized with RSV pneumonia and bronchiolitis, according to the American Academy of Pediatrics.

CMV disease Ganciclovir IV 5 mg/kg bid x 14–21 d; then 5 mg/kg per day as maintenance dose

Ganciclovir, valganciclovir, foscarnet, and cidofovir are approved for treatment of CMV retinitis in patients with AIDS. They are also used for colitis, pneumonia, or “wasting” syndrome associated with CMV and for prevention of CMV disease in transplant recipients.

Valganciclovir Oral 900 mg bid x 21 d; then 900 mg/d as maintenance dose

Valganciclovir has largely supplanted oral ganciclovir and is frequently used in place of IV ganciclovir.

Foscarnet IV 60 mg/kg q8h x 14–21 d; then 90–120 mg/kg per day as maintenance dose

Foscarnet is not myelosuppressive and is active against acyclovir- and ganciclovir-resistant herpesviruses.

Cidofovir IV 5 mg/kg once weekly x 2 weeks, then once every other week; given with probenecid and hydration

Fomivirsen Intravitreal

330 mg on days 1 and 15 followed by 330 mg monthly as maintenance

Fomivirsen has reduced the rate of progression of CMV retinitis in patients in whom other regimens have failed or have not been well tolerated. The major form of toxicity is ocular inflammation.

Varicella: Immuno competent host

Acyclovir Oral 20 mg/kg (maximum, 800 mg) 4 or 5 times daily x 5 d

Treatment confers modest clinical benefit when administered within 24 h of rash onset.

Valacyclovir Oral Children 2–18 years:20 mg/kg tid, not to exceed1 g tid, x5 d

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PATHOLOGY 413

APPENDIX 11: PATHOLOGIC RED CELLS IN BLOOD SMEARSRed Cell Type Description Underlying Change Disease State Associations

Acanthocyte (spur cell)

Irregularly spiculated red cells with projections of varying length and dense center

Altered cell membrane lipids

Abetalipoproteinemia, parenchymal liver disease, postsplenectomy

Basophilic stippling

Punctuate basophilic inclusions

Precipitated ribosomes (RNA)

Coarse stippling: Lead intoxication, thalassemia Fine stippling: A variety of anemias

Bite cell (degmacyte)

Smooth semicircle taken from one edge

Heinz body pitting by spleen

Glucose-6-phosphate dehydrogenase deficiency, drug-induced oxidant hemolysis

Burr cell (echinocyte) or crenated red cell

Red cells with short, evenly spaced spicules and preserved central pallor

May be associated with altered membrane lipids

Usually artifactual; seen in uremia, bleeding ulcers, gastric carcinoma

Cabot rings

Circular, blue, threadlike inclusion with dots

Nuclear remnant Postsplenectomy, hemolytic anemia, megaloblastic anemia

Ovalocyte (elliptocyte)

Elliptically shaped cell

Abnormal cytoskeletal proteins

Hereditary elliptocytosis

Howell-Jolly bodies

Small, discrete, basophilic, dense inclusions; usually single

Nuclear remnant (DNA) Postsplenectomy, hemolytic anemia, megaloblastic anemia

Hypochromic red cell

Prominent central pallor Diminished hemoglobin synthesis

Iron deficiency anemia, thalassemia, sideroblastic anemia

Macrocyte Red cells larger than normal (>8.5 μm), well filled with hemoglobin

Young red cells, abnormal red cell maturation

Increased erythropoiesis; oval macrocytes in megaloblastic anemia; round macrocytes in liver disease

Microcyte Red cells smaller than normal (<7.0 μm)

— Hypochromic red cell

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PATHOLOGY 447

APPENDIX 45: CELL CYCLE

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Appendix for PGMEE (Volume 1)460

Hepadna virusHepatitis B virus (HBV)

Hepatitis B (infectious hepatitis)

Liver cancer

Adenoviridae Acute respiratory disease; Common cold

Adenocarcinomas (cancer of glandular epithelial tissues)

Poxviridae Smallpox; cowpox Miscellaneous

Oncogenic RNA Viruses of The Family Retroviridae

Virus Cancer

Human T-cell leukemia virus (HTLV-1; HTLV-2)

Adult T-cell leukemia, Lymphoma

Sarcoma viruses of cats, chickens, rodents Sarcomas (cancer of connective tissues)

Mammary tumor virus of mice Mammary gland tumors

Feline leukemia virus (FeLV) Feline leukemia

APPENDIX 58: CLUSTER DIFFERENTIATION MARKERS OF LYMPHOID CELL MATURATIONIMMUOPHENOTYPING: LYMPHOID

CELL MATURATION

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PATHOLOGY 463

Enteropathy-associated T-cell lymphoma + + + -(+) +(-) +(-) -

Adult T-cell leukaemia/lymphoma + + - +(-) -(+) +(-) -

Footnote: + = >90% positive: +(-) = >50% positive; -(+) = <50% positive; - = <10% positive. ALCL-Anaplastic large cell lymphoma; C=Cytoplasmic; S-Surface.

APPENDIX 63: CD MARKERS FLOW CHART OF LYMPHOMA AND LEUKEMIAS

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PATHOLOGY 485

Note: SLE, systemic lupus erythematosus; MCTD, mixed connective tissue disease; SCLE, subacute cutaneous lupus erythematosus; PSS, progressive systemic sclerosis; CREST, calcinosis, Raynaud phenomenon, esophageal involvement; sclerodactyly; and telangiectasia

APPENDIX 94: AUTOIMMUNE DISEASESAutoantigen Autoimmune Diseases

CELL- OR ORGAN-SPECIFIC AUTOIMMUNITY

Acetylcholine receptor Myasthenia gravis

Actin Chronic active hepatitis, primary bilary cirrhosis

Adenine nucleotide translator (ANT) Dilated cardiomyopathy, myocarditis

Adrenoreceptor Dilated cardiomyopathy

Aromatic L-amino acid decarboxylase Autoimmune polyendocrine syndrome type 1 (APS-1)

Asialoglycoprotein receptor Autoimmune hepatitis

Bactericidal/permeability-increasing protein (Bpi) Cystic fibrosis vasculitides

Calcium-sensing receptor Acquired hypoparathyroidism

Cholesterol side-chain cleavage enzyme (CYPlla) Autoimmune polyglandular syndrome-1

Collagen type IV-3-chain Goodpasture syndrome

Cytochrome P450 2D6 (CYP2D6) Autoimmune hepatitis

Desmin Crohn disease, coronary artery disease

Desmoglein 1 Pemphigus foliaceus

Desmoglein 3 Pemphigus vulgaris

F-actin Autoimmune hepatitis

GM gangliosides Guillain-Barré syndrome

Glutamate decarboxylase (GAD65) Type 1 diabetes, stiff man syndrome

Glutamate receptor (GLUR) Rasmussen encephalitis

H/K ATPase Autoimmune gastritis

17--Hydroxylase (CYP17) Autoimmune polyglandular syndrome-1

21-Hydroxylase (CYP21) Addison disease

IA-2 (ICA512) Type 1 diabetes

Insulin Type 1 diabetes, insulin hypoglycemic syndrome (Hirata disease)

Insulin receptor Type B insulin resistance, acanthosis, systemic lupus erythematosus (SLE)

Intrinsic factor type 1 Pernicious anemia

Leukocyte function-associated antigen (LFA-1) Treatment-resistant Lyme arthritis

Myelin-associated glycoprotein (MAG) Polyneuropathy

Myelin-basic protein Multiple sclerosis, demyelinating diseases

Myelin oligodendrocyte glycoprotein (MOG) Multiple sclerosis

Myosin Rheumatic fever

p-80-Collin Atopic dermatitis

Pyruvate dehydrogenase complex-E2 (PDC-E2) Primary biliary cirrhosis

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Appendix for PGMEE (Volume 1)512

Section 114A IEA In a prosecution for rape, where the question is whether sexual intercourse was without the consent of the woman, and she states in her evidence that she did not consent, the court shall presume that she did not consent.

Section 126 IEA Professional communication

Section 151 IEA Indecent and scandalous questions

Section 152 IEA Court may forbid any question which appears insulting or offensive

APPENDIX 9: CRIMINAL PROCEDURE CODE 1973

2 (c) CrPc Defines cognizable offences ie arrest without warrant ( rape , murder,dacoity)

26 CrPc Division of offences

39 CrPc Inform police about every illegal event (A government doctor is bound to report all cases of poisoning whether suicidal or accidental or homicidal to police) (A private practitioner is bound to inform only homicidal poisoning) Non compliance/not reporting in above matters is punishable under section 176 IPC, Giving false information on such matters is punishable under section 177 IPC

40 CrPc Inform police about every death (A government doctor is bound to inform all unnatual deaths to police)

53 CrPc Procedure of examination of accused (can be done w/o consent if on request of S.I.)

53 (a) CrPc Procedure of examination of RAPE accused

54 CrPc Accused himself can ask court to get him medically examined to prove his innocence

61-69 CrPc Summons (See APPENDIX: SUMMONS OR SUBPOENA)

160 CrPc Police I.O. has the power to summon any witness (exept female , male<15 yrs)

161 CrPc Police recording of statement in cases

164 (a) CrPc Procedure of examination of RAPE VICTIM

164 CrPc MAGISTRATE recording of statement in cases

174 CrPc Police inquest

174 (3) CrPc Procedure in dowry death

175 CrPC Power to summon persons (Medical practitioner can be summoned by I.O. and he is bound to attend)

176 CrPc Magistrate inquest (custodial death, dowry death, death in mental asylum)

291 CrPc This is accepted as evidence in a higher court when it has been recorded and attested by a magistrate in the presence of the accused who had an opportunity of cross examining the witness

357 (c) CrPc Free treatment by all medical institution to RAPE/ ACID ATTACK victims

409 CrPc Withdrawl of cases by session judge

410 CrPc Withdrawl of cases by judicial magistrate

411 CrPc Withdrawl of cases executive magistrate

412 CrPc Reasons to be recorded for withdrawl of cases

416 CrPc Postponement of execution of a pregnant woman (upto 6 months after delivery) or change it to life imprisonment by high court

APPENDIX 10: INDIAN PENAL CODE, 1860 (ACT NO. 45 OF YEAR 1860)

Sections Particulars

Chapter ISection 1-5

Introduction

Chapter IISECTION 6-52

General Explanations

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FORENSIC MEDICINE 521

APPENDIX 15: IDENTIFICATION OF AGE

Identification of age by Galstaun chart (most accepted) age in years

Ossification centre Girls (years) Boys (years)

Elbow 13-15 (Head of radius-14, Olecranon -15) 15-17 (Head of radius-16, Olecranon -17)

Wrist 16-17 (Lower end of radius-16.5, lower end of ulna-17) (Pisiform- last bone in the wrist- 12-17)

18-19 (Lower end of radius-16-17, lower end of ulna-18) (Pissiform- last bone in the wrist- 9-12)

Shoulder 17-18 19-20

Iliac crest 17-19 19-20

Ischial tuberosity 20 20

Inner end of clavicle 20 22

Lower end of femur 14-17 14-17

Lower end of tibia 14-15 15-17

Identification of intrauterine age

Hasse’s rule Upto 5 months, square root of length of foetus in cm is the age of foetus

After 5 months, age in lunar months multiplied by 5 is the length of the foetus , i.e. 1/5th of the length of the fetus in cm gives the age in lunar months. Sometimes separately referred to as Morison’s rule

Identification of age by Carpal bones

There are 8 carpal bones and Pisiform is last to appear. Approximate age before appearance of Pisiform can be given from the number of carpal bones. i.e. Total number of carpal bones= Age in years At 9th year all 8 carpal bones are present.

Identification of age by Sternum

Appearance Fusion

Manubrium 5-6 months intra uterine 60 years with body

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FORENSIC MEDICINE 527

Spectroscopic test Spectroscopy Confirmatory, Most specific, requires sizeable stain (> 1 cm2). Can detect both recent as well as old blood stains

Physiochemical tests

Thin layer chromatography

Electrophoresis

Species specific tests

Immunological tests (Precipitin test, Heamagglutination inhibition test, Latex test)Enzymological tests (LDH Electrophoresis)

To differentiate human blood with animal blood

Blood group detection tests

Immunological tests: Absorption-Elution test (a.k.a Acid dilution test, Acid elution test) Mixed agglutination test Absorption inhibition test Enzymological tests: Vertical disc, vertical or horizontal slab, isoelectric focusing, cellulose acetate membrane

Absolute diagnosis of blood group is not possible. Can detect blood groups in old and dry stains

APPENDIX 20: DACTYLOGRAPHY

AKA: Dactuloscopy, Dermatographics, Galton systen, Fingerprint study

Sir Henry Galton (1892) depending on the arrangements of papillary ridges classified the finger prints into 4 major primary types. 1. Arch = 7% (Plain and Tented)2. Loop = 65% (Most common, Ulnar loop and Radial loop) 3. Whorl = 25% (Circular, Spiral clockwise, Spiral Counterclockwise) 4. Composite: Mix of all three patterns above (2–3%)

Whorl pattern Loop pattern Arch pattern

There exist four types of fingerprint readers:1. Optical readers take a visual image of the fingerprint using a digital camera. Cheap and used in mobiles2. Capacitive or CMOS readers use capacitors and thus electrical current to form an image of the fingerprint3. Ultrasound fingerprint readers costly 4. ThermalNote:The little fingers are never recorded because they are not particularly well suited for fingerprint comparisonMost suitable fingerprints in fingerprint scanners : Index finger > Thumb > Middle finger > Ring finger .Most suitable for ink impression fingerprints on papers/ documents: Thumb > Index finger > Middle finger > Ring finger

ΕΕ Fingerprints are formed during Intrauterine life. ΕΕ Fingerprints are 100% accurate method of identification ΕΕ In practice minimum 12 point matching is considered as proof of identity (In India), however traditionally 16 points matching is considered by most foreign Authors. Question can be asked in two forms. Minimum matching and normally considered ΕΕ No two person can have same Finger prints, not even identical twins ΕΕ Chances of two person having identical fingerprints is 1 in 64000 millions ΕΕ Faint and invisible finger prints (Latent Fingerprints)can be made visible by special techniques like Aluminium hydroxide. ΕΕ Finger prints can be taken from dead bodies and even putrified bodies. ΕΕ The first Fingerprint Bureau in world was established at Kolkata on 12th June 1897 at Writer’s building.

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FORENSIC MEDICINE 545

Skull bone Beveled inner table Beveled outer table

Singeing, Blackening, Burning, Tattooing, Grease/dirt collar

Present Absent

APPENDIX 48: SHOTGUN FIREARM INJURIES

Contact/ Point Blank range

Close range Short range Intermediate range Long/ Distant shot

Distance Contact Upto 1 meter 1-2 meters 2-4 meters > 4 meters

Size Large lacerated with cavitation due to gases.

Bullet size entry wound Single circular aperture 4-5 cm in diameter.

Central hole with small peripheral Satellite holes

Central hole absent . Small individual

Shape Shotgun entry wound is round, elliptical, cruciate, triangular, and single upto 30 cm. Edges are normally inverted (may be everted due to bone underneath or gases coming out)

Between 30 cm to 1 m, the rim of the wound is irregular and often called a ‘Rat-hole’ in the USA because of the nibbled edges, the same appearance is called ‘scalloping’ in the UK. There may be annular abrasion and bruising/”rat nibbling”

Irregular margins of central entry wound without any satellite wounds

Irregular margins of a central entry wound with few satellite independent entry wounds are seen from 2 mtr and above

all pellets show independent entry wound from 4 meters onwards.

Abrasion ring/ Grease collar

Present Present Absent Absent Absent

Burning & Singeing of hair

Present Present Absent Absent Absent

Soot Blackening / Smudging

Present Present Present Absent Absent

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