Introduction to inetwork and the ANGEN NG9-1-1 dashboard Training Module 1
S Paul 1 , N Toft 1 , JF Agger 1 , Ø Angen 2 , AB Christoffersen 2 , JS Agerholm 1
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Transcript of S Paul 1 , N Toft 1 , JF Agger 1 , Ø Angen 2 , AB Christoffersen 2 , JS Agerholm 1
F A C U L T Y O F H E A L T H A N D M E D I C A L S C I E N C E S
U N I V E R S I T Y O F C O P E N H A G E N
Sensitivity and specificity of ELISA and PCR tests for Sensitivity and specificity of ELISA and PCR tests for identifying identifying Coxiella burnetiiCoxiella burnetii seropositive and shedder seropositive and shedder
cows using Bayesian analysiscows using Bayesian analysisS Paul1, N Toft1, JF Agger1, Ø Angen2, AB Christoffersen2, JS Agerholm1
1Dept. of Large Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark; 2National Veterinary Institute, Technical University of Denmark
To estimate sensitivity (Se) and specificity (Sp) of milk and blood antibody ELISA and milk PCR tests to determine Coxiella burnetii status in dairy cows
Bulk tank milk (BTM) samples of 12 herds were tested for the level of C. burnetii antibodies by ELISA
BTM antibody level 64 was used as cut-off to stratify herds into high and low antibody level groups
Milk ELISA Blood ELISA Milk PCR
454 lactating cows
230 lactating cows 224 lactating cows
Se and Sp of the tests were estimated using latent class modeling in Bayesian analysis
Conditional dependency (COC) between milk and blood ELISA tests was assumed and estimated
Milk PCR
Mil
k E
LIS
A
Blood ELISA
Fig.1: Comparison between the sensitivite and 1- specificity plots of milk PCR, milk ELISA and blood ELISA at recommended vs best fit cut-offs
Fig.2: A plot of the posterior mean prevalance estimates for two populations at different PCR cut-off values and at a cut-off of 30 for ELISAs
RESULTS
The best set of results was revealed at cut offs at 33 quantification cycles for PCR and at antibody level 30 for the ELISA tests (Fig.1)
Se and Sp of these tests at this cut-off combination:
Milk PCR Milk ELISA Blood ELISA
Se (95% PCI*) 0.87 (0.71-0.99) 0.57 (0.48-0.67) 0.42 (0.31-0.53)
Sp (95% PCI) 0.99 (0.95-1.00) 0.88 (0.84-0.93) 0.86 (0.81-0.91)
*Posterior credibility interval
PCR Se and Sp were significantly higher than those of both ELISAs
Se of milk ELISA was significantly higher than Se of blood ELISA
COC estimates confirmed the conditionally dependency of
ELISAs
Prevalence increased with increasing quantification cycles for PCR (Fig.2) indicating an increased number of cows with
low concentration of bacteria in milk
OBJECTIVE
MATERIALS AND METHODS
BACKGROUNDCoxiella burnetii infection is prevalent worldwide including DenmarkHigh plevence was observed in Danish dairy cattle in recent yearsDiagnosis is mainly based on the dectection of bacteria by PCR or dectection of anitibodies by immunological testsHowever, very little is know about the characteristics of these commonly used tests
CONCLUSIONS
PCR has higher Se and Sp than both ELISAs and therefore, is considered a better test for identifying shedder cows
However, high testing costs and risk of misclassifying intermittently shedding animals may be an argument for recommending PCR as screening test in a control program
454 lactating cows from the 12 herds were included in the study