Propelling the MCBK Community: Workgroup Launch · • Broad perspective on CBK • Framework •...

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Propelling the MCBK Community: Workgroup Launch December 19, 2018, 12-1 EST All lines are muted upon entry Pose your questions via the chat pod Click on the “Send-to” drop-down and select EVERYONE, then submit your question Continue the conversation on Twitter: #MobilizeCBK 1

Transcript of Propelling the MCBK Community: Workgroup Launch · • Broad perspective on CBK • Framework •...

Page 1: Propelling the MCBK Community: Workgroup Launch · • Broad perspective on CBK • Framework • Metadata • Representation formalism • Packaging • Embodiment of FAIR principles

Propelling the MCBK Community: Workgroup Launch

December 19, 2018, 12-1 EST

• All lines are muted upon entry

• Pose your questions via the chat pod• Click on the “Send-to” drop-down and select EVERYONE,

then submit your question

• Continue the conversation on Twitter: #MobilizeCBK

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Page 2: Propelling the MCBK Community: Workgroup Launch · • Broad perspective on CBK • Framework • Metadata • Representation formalism • Packaging • Embodiment of FAIR principles

Propelling the MCBK Community:Workgroup Launch

#MobilizeCBK

Rachel Richesson, PhD, MPH Duke University

MCBK Co-Chair and Moderator

Bob Greenes, MD, PhDArizona State University

Chris Shaffer, MSUniversity of California San Francisco

Blackford Middleton, MD, MPH, MScApervita, Inc.

Jerry Perry, MLSUniversity of Arizona

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Structure for Today • Getting Here

• Computable Biomedical Knowledge (CBK) – What?

• Mobilizing CBK – Why?

• The Growing MCBK Community – How!

• MCBK Workgroup Presentations • #1 - Standards for MCBK | Bob Greenes

• #2 - Technical Infrastructure for MCBK | Chris Shaffer

• #3 - Policy and Coordination to Ensure Quality & Trust | Blackford Middleton

• #4 - Sustainability for Mobilization and Inclusion | Jerry Perry

• Questions and Answers 3

Page 4: Propelling the MCBK Community: Workgroup Launch · • Broad perspective on CBK • Framework • Metadata • Representation formalism • Packaging • Embodiment of FAIR principles

Present: Human readable in words & pictures

Future: Computable (machine-executable) in code

Library Holdings: Books and Journals

Library Holdings: Will add Digital Knowledge Objects

Two Complementary Ways to Represent Knowledge

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Human Readable: Article

Extraction

Computable: CodeEncodable: Model

Programming

Envisioning An Extended Publication Pipeline

LibraryExpanded Library

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Approach to Knowledge FAIRness: Machine-Executable Knowledge Objects

Articles

Knowledge Objects

Description

Interface

Computer-processableKnowledge‘Payload’

Guidelines

Learning Health Sciences

Local Analytical

Results

*FAIR: Findable | Accessible | Interoperable | Reusable

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Use Cases for Computable Knowledge: CDS & Beyond

• Clinical: Present advice to inform decisions of providers & patients; evaluate treatments and measure performance for health organizations

• Research: Enhance scientific data & patient records, computable phenotypes, analytic “packages”

• Public Health: Event detection; deploy rapid response actions to threats; support behavior change and chronic disease management

• Education: Learning analytics, training for big data or ubiquitous knowledge environments

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MCBK - Inaugural Public MeetingJuly 10-11, 2018

Lister Hill National Center for Biomedical Communications

National Library of Medicine

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MCBK Manifesto

www.MobilizeCBK.org

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Outcomes of July Meeting• Advance MCBK agenda, primarily through the 4 theme-

based workgroups

• Develop supportive infrastructure (website, communication and outreach plans)

• Create webinar series

• Plan for 2nd public meeting for summer 2019

• Interim “governance”• Meeting Planning Committee Steering Committee• University of Michigan interim home/resource hub

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MCBK Workgroup Co-Chairs

Sustainability for Mobilization and InclusionChris Dymek, Ed.D. Jerry Perry, MLS

Policy & Coordination to Ensure Quality & TrustBlackford Middleton, MD, MPH, MSc Jody Platt, PhD, MPH

Technical Infrastructure for MCBK Leslie McIntosh, PhD, MPH Chris Shaffer, MS

Standards for MCBK Bob Greenes, MD, PhD TBD

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Standards for MCBK

Bob GreenesCo-Chair

Arizona State University

Allen FlynnMCBK Liaison

University of Michigan

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Goals

• Standardize descriptions for characterizing CBK• Identify axes for metadata,

• e.g., relating to domain, type of knowledge, derivation, user anticipated, and other context-situation attributes

• Develop a spanning set of use cases for CBK and knowledge-sharing scenarios

• Standardize knowledge representation for each type of knowledge

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• Recruit key stakeholders to Workgroup• Identify priority use cases for reusable knowledge

• Constituency committed to working on it• Demonstrated need / commitment to use it

• E.g. Reducing physician burden

• Develop candidate metadata axes• Coordinate with HL7, OMG, and other initiatives to

leverage and contribute to ongoing relevant work• Develop candidate KRs• Iterate

Processes

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Evolution of Workgroup • Broad perspective on CBK

• Framework• Metadata• Representation formalism• Packaging

• Embodiment of FAIR principles• Need for input of diverse community

• To decide on priorities and direction • To establish leadership team with appropriate

breadth, experience• Familiar with ongoing standards efforts• Have sufficient time/energy to commit

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Standards for MCBK: Questions?

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Technical Infrastructure for MCBK

Chris ShafferCo-Chair

University of CaliforniaSan Francisco

Leslie McIntoshCo-Chair

Research Data Alliance

Peter BoisvertMCBK Liaison

University of Michigan

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MCBK Infrastructure: Charge

● Identify the landscape of infrastructure stakeholders● Describe the framework components necessary to

move computable biomedical knowledge from generation into practice by facilitating the testing, versioning, use, evaluation, scalability, interoperability, and dissemination of CBK

● Develop use cases connecting stakeholders to framework components

● Act as a clearinghouse for news and events of interest to infrastructure stakeholders and the overall MCBK community

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MCBK Stakeholders are the generators, managers, and consumers of CBK

● Clinical researcher who uses CBK● Clinical providers● Biomedical informatics leader who runs EHR and

leads a Learning Health System● Consumers / patients● Patient organizations (e.g. Michael J. Fox

Foundation)● Insurance companies● Security / IT / Compliance

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Engaging with Complementary Efforts

● RDA ● GA4GH ● Chan Zuckerberg ● BioHub

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Technical Infrastructure for MCBK: Questions?

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Policy and Coordination to Ensure Quality and Trust

Blackford MiddletonCo-Chair

Apervita, Inc.

Jody PlattCo-Chair and MCBK Liaison

University of Michigan

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Policy and Coordination to Ensure Quality and Trust

Summary from July, 2018 Meeting: What would we need to ensure quality and trust in CBK?

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Components: ValidityAuthorship/ Review/ Publication criteriaEvidenceCurrency (up-to-date)Audit CredentialingSoftwareInteroperability

Characteristics:TransparencyReliabilityReproducibilityConsistencyProvenanceAccessibilityRelevancy

Challenges: GovernanceAdjudication of knowledge/ PrioritizationAligning incentives (Buy-in, acceptability)Validity/ Validation

Characters: Users (patients, providers, payors, communities)EngineersVendorsSystem administratorsDisseminatorsContent area expertsAuthorsRelationships between actors

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Policy and Coordination to Ensure Quality and Trust

Preliminary Charter• Identify and address gaps in policy and issues that

would impact the quality of the data and knowledge, or its trustworthiness.

• Coordinate efforts to apply, evaluate, and build upon the Trust Framework to ensure that all stakeholders can participate as trusted and trustworthy agents.

• Action-focused • Ensuring robust and unbiased methods to support

• (1) transparency• (2) FAIRness, and • (3) currency, validity, and provenance of CBK

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Policy and Coordination to Ensure Quality and Trust

Next Steps• Understand the current CBK landscape as it relates to

trust, governance of CBK, policies for CBK• Define attributes for CBK “product information labels”

that would promote transparency and trust• Develop and test model governance structures• Work with and support the MCBK community and

work groups

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Policy and Coordination to Ensure Quality and Trust: Questions?

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Sustainability for Mobilization and Inclusion

Jerry PerryCo-Chair

University of Arizona

Chris DymekCo-Chair

AHRQ

Josh RubinMCBK Liaison

University of Michigan

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Sustainability for Mobilization and Inclusion

Summary from July, 2018 Meeting

Day 1:● Get energized to promote the movement for CBK

○ Need to articulate the value proposition for CBK

● Broke into 4 groups to think about how to stratify stakeholders and strategies for moving CBK forward

● Groups considered included:○ Knowledge creators○ Knowledge hosts, disseminators, and developers○ Knowledge consumers

Day 2:● Drafted a value proposition, strategy and initial tactical plans for

engaging with the groups targeted during day 128

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Sustainability for Mobilization and Inclusion

Preliminary Charter:

• Seek to mobilize diverse stakeholders in an ongoing and active engagement around the value proposition of computable biomedical knowledge (CBK)

• Will focus on communications and engagement with stakeholdersas a necessary prerequisite in order to establish an equitable and FAIR* CBK ecosystem

• Seek engagement through diverse and active communication channels with stakeholders from CBK:

• “creator” communities, including professional societies, accrediting bodies, entrepreneurs and businesses;

• “hosting and dissemination” communities, including publishers, libraries and commercial brokerages;

• “consumer” communities, including healthcare providers and clinical care delivery systems, and healthcare provider and consumer advocacy organizations; and,

• funding communities, including Federal, charitable, philanthropic, association-based, and for-benefit entities that support innovation and equity in healthcare

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Sustainability for Mobilization and Inclusion

Next Steps:• Socialize this draft charter with workgroup

members• Revise based on workgroup feedback

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Sustainability for Mobilizationand Inclusion:

Questions?

Page 32: Propelling the MCBK Community: Workgroup Launch · • Broad perspective on CBK • Framework • Metadata • Representation formalism • Packaging • Embodiment of FAIR principles

Q & A

• Pose your questions via the chat pod• Click on the “Send-to” drop-down and select EVERYONE,

then submit your question• The moderator may unmute selected participants• Unanswered questions will be distributed post-webinar• Join a workgroup! http://bit.ly/MCBKweb2• Continue the conversation on Twitter: #MobilizeCBK

www.MobilizeCBK.org32

Page 33: Propelling the MCBK Community: Workgroup Launch · • Broad perspective on CBK • Framework • Metadata • Representation formalism • Packaging • Embodiment of FAIR principles

Get involved!

• Website – www.MobilizeCBK.org• General Email –

[email protected]

• Join a workgroup – complete the survey or email us!http://bit.ly/MCBKweb2

• Promote and attend webinars

• Plan to attend next MCBK meeting July 18-19, 2019

#MobilizeCBK 33

Page 34: Propelling the MCBK Community: Workgroup Launch · • Broad perspective on CBK • Framework • Metadata • Representation formalism • Packaging • Embodiment of FAIR principles

Q & A

• Pose your questions via the chat pod• Click on the “Send-to” drop-down and select EVERYONE,

then submit your question• The moderator may unmute selected participants• Unanswered questions will be distributed post-webinar• Join a workgroup! http://bit.ly/MCBKweb2• Continue the conversation on Twitter: #MobilizeCBK

www.MobilizeCBK.org34