Progress in typhoid epidemiology...Jul 02, 2016 · Mode of transmission locally • Foodborne...
Transcript of Progress in typhoid epidemiology...Jul 02, 2016 · Mode of transmission locally • Foodborne...
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Progress in typhoid epidemiology
John A. Crump, MB ChB, MD, DTM&H
McKinlay Professor of Global Health
10th International Conference on Typhoid
and Other Invasive Salmonelloses
4 April 2017
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Overview
• Mode of transmission and sources
– Evidence and importance
• Burden of disease
– Current estimates and trends
– Extrapolation, uncertainty, and data gaps
– Severe disease and death
– Occurrence by age
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Modes of transmission
Direct transmission
Direct contact
Droplet spread
Indirect transmission
Airborne
Vectorborne
Vehicleborne
= ‘Person-to-person transmission’
Direct contact between persons without intermediaries
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Chain of infection
Portal of
exitPortal of entry
Susceptible
hostReservoir
Mode of
transmission
Other
What is the source and
predominant mode(s) of
transmission?
What is the
relative
contribution of
acute shedders
versus chronic
carriers?
Source
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Mode of transmission in aggregate
• Mogasale systematic review and meta-analysis association between unimproved water and typhoid fever
– Persons with unimproved water have 2.4 times odds of typhoid fever compared with those with improved water
– Aggregating empiric studies is informative
• WHO Foodborne Diseases Epidemiology Reference Group Source Attribution Task Force, structured expert elicitation using Cooke's Classical Method
– Water: 0.33-0.57
– Food: 0.08-0.49
– Other: 0.11-0.47
Mogasale V, et al. Lancet Glob Health 2014; 2: e570-80
Hald T, et al. PLoS One 2015; 11: e0145839
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Mode of transmission locally
• Foodborne
– Restaurant-associated outbreaks linked to chronic carriage in food handler in countries where typhoid is rare e.g., Colorado, United States
• Waterborne
– Municipal water supplies e.g., Kathmandu, Nepal
• Waterborne and foodborne
– Consuming surface water and produce grown in pit latrine seepage e.g., Central Division, Fiji
Hancock-Allen J, et al. MMWR Morb Mortal Wkly Rep 2017; 66: 295-8
Karkey A, et al. PLoS Neglect Trop Dis 2016; 10: e0004346
Prasad N, et al. 10th International Conference on Typhoid and Other Invasive Salmonellses, 2017
Jenkins A,, et al. 10th International Conference on Typhoid and Other Invasive Salmonellses, 2017
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Role of infection class on transmission
• Fecal shedding classes following onset of acute illness
– Acute shedding: <3 months
– Convalescent carriers: 3-12 months
– Chronic carriers: >12 months
• Things that we ‘know’
– At low force of infection a larger proportion of acute typhoid is in age groups more susceptible to becoming chronic carriers
– As acute typhoid infections approach zero the role of chronic carriers as the reservoir approaches 100%
– Much to learn
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History of published estimates of typhoid burden
Year
Metrics 1980 1996 2000 2010 2010 2010 2010 2013 2015 2015
Origin WHO WHO US CDC IVI JHU WHO IHME IHME IHME Yale
Coverage Global,
except
China
Global Global LMIC,
unadjusted
Global Global Global,
including
paratyphoid
Global Global LMIC
Illnesses
(millions)
12.5 16.0 21.7 20.6 26.9 20.1 - 11.0 12.5 17.8
DALYs
(thousands)
- - - - - 10,292 12,239 11,128 10,576 -
Deaths - 600,000 216,510 223,000 - 144,890 190,200 160,700 148,800 -
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Global population, 1980-2015
0
1
2
3
4
5
6
7
8
1980 1985 1990 1995 2000 2005 2010 2015
Year
Po
pu
lati
on
(b
illio
ns)
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Global population and typhoid illness estimates
1980-2015
0
5
10
15
20
25
0
1
2
3
4
5
6
7
8
1980 1985 1990 1995 2000 2005 2010 2015
Year
Po
pu
lati
on
(b
illio
ns)
Typ
ho
id i
lln
esses (
millio
ns)
Excluded China
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Global population and typhoid illness estimates
1980-2015
0
5
10
15
20
25
30
35
40
0
1
2
3
4
5
6
7
8
1980 1985 1990 1995 2000 2005 2010 2015
Year
Po
pu
lati
on
(b
illio
ns)
Typ
ho
id i
lln
esses (
millio
ns)
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Global population and typhoid illness estimates
1995-2015
0
5
10
15
20
25
0
1
2
3
4
5
6
7
8
1995 2000 2005 2010 2015
Year
Po
pu
lati
on
(b
illio
ns)
Typ
ho
id i
lln
ess
es
(m
illi
on
s)
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Typhoid incidence and deaths
1995-2015
0
200,000
400,000
600,000
800,000
0
50
100
150
200
250
300
350
400
1995 2000 2005 2010 2015
Year
Typ
ho
id i
ncid
en
ce/
100,0
00/
year
Typ
ho
id d
eath
s p
er
year
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Extrapolation, uncertainty, and data gaps
• Improvements in methods for extrapolation
• Estimating uncertainty
• Data gaps
– Areas and age groups needing incidence data
– More and better data on disability and death
– The ‘hidden’ problem in Oceania
Antillon M, et al. PLoS Neglect Trop Dis 2017; 11: e0005376
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Change in improved drinking water coverage
by region, 1990 to 2015
UNICEF and WHO. 2015
Sub-Saharan Africa
Oceania
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Typhoid fever in infants and young children aged <2 years
0
200
400
600
0 6 12 18 24
Age (months)
Inc
ide
nc
e p
er
10
0,0
00/y
ea
r Volume
inadequacyContamination
Under-ascertainment
by blood culture
UnderuseMaternal
antibody
Breast
feeding
Protection, disease,
and lack of exposure
Mild
disease
Force of infection
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William Budd, b. 14 Sep 1811, d. 9 Jan 1880
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Role of infection class in transmission
• Things that we would like to know more about
– Proportion stool cultures positive in acute disease
vs. chronic carriage
– Concentration of Salmonella Typhi in feces in acute
disease vs. chronic carriage
Thomson S. J Hyg 1954; 52: 67-70
Merselis JG, et al. Am J Trop Med Hyg 1964; 13: 425-9
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Distribution of typhoid fever by age group at
various incidence levels, 2000
Crump JA, et al. Bull World Health Organ 2004; 82: 346-53
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Typhoid fever DALYs and deaths by age
Global Burden of Disease 2015
0
200
400
600
800
1000
EN
LN
PN
1-4
5-9
10-1
4
15-1
9
20-2
4
25-2
9
30-3
4
35-3
9
40-4
4
45-4
9
50-5
4
55-5
9
60-6
4
65-6
9
70-7
4
75-7
9
80+
Age (years)
DA
LY
s p
er
10
0,0
00
Disability Adjusted Life Years
0
2
4
6
8
10
EN
LN
PN
1-4
5-9
10-1
4
15-1
9
20-2
4
25-2
9
30-3
4
35-3
9
40-4
4
45-4
9
50-5
4
55-5
9
60-6
4
65-6
9
70-7
4
75-7
9
80+
Dea
ths
pe
r 1
00
,000
Age (years)
Deaths
http://vizhub.healthdata.org/gbd-compare/
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Social inequity
• High-income countries
– Declined following increased access to safe water and
food in urban areas
– Disease of travelers, beneficiaries of typhoid vaccines
• Low- and middle-income countries
– Poor sanitation, unsafe water and food
– Crowding
– Limited access to vaccines
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Acute disease and chronic carriage as reservoir
0
20
40
60
80
100
None Low Medium High Very high
Typhoid incidence level
Pro
po
rtio
n o
f in
fecti
on
s w
ith
ch
ron
ic c
arr
ier
as r
ese
rvo
ir
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Deaths by cause and age, Hamburg, Germany, 1872-1900
Sedgwick WT, et al. J Infect Dis 1910; 7: 490-564 1872 1900
1872 1900
Typhoid fever deaths
Infant deaths
Elbe River water
filtered
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Improved drinking water coverage, global, 2015
UNICEF and WHO. 2015
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Data inequity
• High-income countries
– Laboratory confirmation
– Notifiable disease with high reporting
– Robust data
• Low- and middle-income countries
– Dependence on clinical diagnosis
– Weak surveillance with low reporting
– Poor quality routine data
– Special studies
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Moving targets for vaccine
• Person, place, and time
– Vaccination of ‘high risk groups and populations’ based on ‘local epidemiologic situation’
– Who should be vaccinated and where?
• Age
– ‘Immunization of school-age and/or preschool-age children’
– Typhoid conjugate vaccines can protect below 2 years of age
– At what age should we vaccinate to prevent the most disease?
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Global distribution of typhoid fever, 2000 vs. 2010
Crump JA, et al. Bull World Health Organ 2004; 82: 346-53 Mogasale V, et al. Lancet Glob Health 2014; 2: e570-80
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Salmonella enterica bloodstream infections, Queen
Elizabeth Central Hospital, Blantyre, Malawi, 1998-2014
Feasey NA, et al. Clin Infect Dis 2015; 61 (suppl 4): S363-71
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Conclusions
• Current typhoid fever estimates are remarkably consistent, improving with
– New data
– Better extrapolation and modeling
• Data are weakest in areas with most disease
– Complications and death
• Typhoid fever incidence varies in person, place, and time
– Targeting vaccine is challenging
– Need to understand more about disease in infants and young children
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Role of infection class in transmission
• Fecal shedding classes following onset of acute illness
– Acute shedding: <3 months
– Convalescent carriers: 3-12 months
– Chronic carriers: >12 months
• Things that we ‘know’
– At low force of infection a larger proportion of acute
typhoid is in age groups more susceptible to becoming
chronic carriers
– As acute typhoid infections approach zero the role of
chronic carriers as the reservoir approaches 100%
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Role of infection class in transmission
• Things that we would like to know more about
– Proportion stool cultures positive higher in acute
disease vs. chronic carriage?
– Concentration of Salmonella Typhi in feces higher in
acute disease vs. chronic carriage?
• Chronic carriers (when positive): 106-1010 CFU/g (Merselis)
• <102-107 (Thomson)
Thomson S. J Hyg 1954; 52: 67-70
Merselis JG, et al. Am J Trop Med Hyg 1964; 13: 425-9