Prentice Hall c2002Chapter 81 Principles of BIOCHEMISTRY Third Edition HORTON MORAN OCHS RAWN...

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Prentice Hall c2002 Chapter 8 1 Principles of Principles of BIOCHEMISTRY BIOCHEMISTRY Third Edition Third Edition HORTON MORAN OCHS RAWN SCRIMGEOUR

Transcript of Prentice Hall c2002Chapter 81 Principles of BIOCHEMISTRY Third Edition HORTON MORAN OCHS RAWN...

Page 1: Prentice Hall c2002Chapter 81 Principles of BIOCHEMISTRY Third Edition HORTON MORAN OCHS RAWN SCRIMGEOUR.

Prentice Hall c2002 Chapter 8 1

Principles ofPrinciples of BIOCHEMISTRYBIOCHEMISTRYThird EditionThird Edition

HORTON MORAN OCHS RAWN SCRIMGEOUR

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Chapter 8 - Carbohydrates

• Carbohydrates (“hydrate of carbon”) have empirical formulas of (CH2O)n , where n ≥ 3

• Monosaccharides one monomeric unit

• Oligosaccharides ~2-20 monosaccharides

• Polysaccharides > 20 monosaccharides

• Glycoconjugates linked to proteins or lipids

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8.1 Most Monosaccharides are Chiral Compounds

• Aldoses - polyhydroxy aldehydes

• Ketoses - polyhydroxy ketones

• Most oxidized carbon: aldoses C-1, ketoses usually C-2

• Trioses (3 carbon sugars) are the smallest monsaccharides

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Aldoses and ketoses

• Aldehyde C-1 is drawn at the top of a Fischer projection

• Glyceraldehyde (aldotriose) is chiral (C-2 carbon has 4 different groups attached to it)

• Dihydroxyacetone (ketotriose) does not have an asymmetric or chiral carbon and is not a chiral compound

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Fig 8.1 Fischer projections of: (a) L- and D-glyceraldehyde, (b) dihydroxyacetone

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Fig 8.2 Stereo view of L- and D-glyceraldehyde

(L) (D)

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Fig 8.3 Fisher projections of 3 to 6 carbon D-aldoses

• D-sugars have the same configuration as D-glyceraldehyde in their chiral carbon most distant from the carbonyl carbon

• Aldoses shown in blue (next slide) are most important in biochemistry

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Fig. 8.3

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Fig. 8.3 (continued)

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Fig 8.3 (continued)

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Enantiomers and epimers

• D-Sugars predominate in nature

• Enantiomers - pairs of D-sugars and L-sugars

• Epimers - sugars that differ at only one of several chiral centers

• Example: D-galactose is an epimer of D-glucose at C-4

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Fig 8.4 Fisher projections of L- and D-glucose

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Fig 8.5 Fisher projections of the 3 to 6 carbon D-ketoses (blue structures are most common)

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Fig. 8.5 (continued)

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Fig 8.5 (continued)

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8.2 Cyclization of Aldoses and Ketoses

Fig. 8.6 Reaction of an alcohol with:

(a) An aldehyde to form a hemiacetal

(b) A ketone to form a hemiketal

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Fig 8.7 (a) Pyran and (b) furan ring systems

• (a) Six-membered sugar ring is a “pyranose”

• (b) Five-membered sugar ring is a “furanose”

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Fig 8.8 Cyclization of D-glucose to form glycopyranose

• Fischer projection (top left)

• Three-dimensional figure (top right)

• C-5 hydroxyl close to aldehylde group (lower left)

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Fig. 8.8 (continued)

• Reaction of C-5 hydroxyl with one side of C-1 gives , reaction with the other side gives

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Fig 8.9 Cyclization of D-ribose to form - and -D-ribopyranose and - and -D-ribofuranose

Continued on next slide

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Fig. 8.9 (continued)

Continued next slide

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Fig 8.9 (continued)

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8.3 Conformations of Monosaccharides

Fig. 8.10 Conformations of -D-ribofuranose

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Fig 8.11 Conformations of -D-glucopyranose

(b) Stereo view of chair (left), boat (right)

Haworth projection Chair conformation

Boat conformation

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Fig 8.12 Conformations of -D-glucopyranose

• Top conformer is more stable because it has the bulky hydroxyl substituents in equatorial positions (less steric strain)

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8.4 Derivatives of Monosaccharides

• Many sugar derivatives are found in biological systems

• Some are part of monosaccharides, oligosaccharides or polysaccharides

• These include sugar phosphates, deoxy and amino sugars, sugar alcohols and acids

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Table 8.1

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A. Sugar Phosphates

Fig 8.13 Some important sugar phosphates

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B. Deoxy Sugars

• In deoxy sugars an H replaces an OH

Fig 8.14 Deoxy sugars

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C. Amino Sugars

• An amino group replaces a monosaccharide OH

• Amino group is sometimes acetylated

• Amino sugars of glucose and galactose occur commonly in glycoconjugates

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Fig 8.15 Several amino sugars

• Amino and acetylamino groups are shown in red

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Fig. 8.15 (continued)

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D. Sugar Alcohols (polyhydroxy alcohols)

• Sugar alcohols: carbonyl oxygen is reduced

Fig 8.16 Several sugar alcohols

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E. Sugar Acids

• Sugar acids are carboxylic acids • Produced from aldoses by:

(1) Oxidation of C-1 to yield an aldonic acid

(2) Oxidation of the highest-numbered carbon to an alduronic acid

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Fig 8.17 Sugar acids derived from glucose

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Fig. 8.17 (continued)

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F. Ascorbic Acid (Vitamin C)

• L-Ascorbic acid is derived from D-glucuronate

Fig 8.18 L-Ascorbic acid

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8.5 Disaccharides and Other Glycosides

• Glycosidic bond - primary structural linkage in all polymers of monosaccharides

• An acetal linkage - the anomeric sugar carbon is condensed with an alcohol, amine or thiol

• Glucosides - glucose provides the anomeric carbon

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Fig 8.19 Glucopyranose + methanol yields a glycoside

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A. Structures of Disaccharides

Fig 8.20 Structures of (a) maltose, (b) cellobiose

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Fig. 8.20 (continued)

Structures of (c) lactose, (d) sucrose

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B. Reducing and Nonreducing Sugars

• Monosaccharides and most disaccharides are hemiacetals (contain a reactive carbonyl group)

• Called reducing sugars because they can reduce metal ions (Cu2+, Ag+)

• Examples: glucose, maltose, cellobiose, lactose

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C. Nucleosides and Other Glycosides

• Anomeric carbons of sugars can form glycosidic linkages with alcohols, amines and thiols

• Aglycones are the groups attached to the anomeric sugar carbon

• N-Glycosides - nucleosides attached via a ring nitrogen in a glycosidic linkage

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Fig 8.21 Structures of three glycosides

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8.6 Polysaccharides

• Homoglycans - homopolysaccharides containing only one type of monosaccharide

• Heteroglycans - heteropolysaccharides containing residues of more than one type of monosaccharide

• Lengths and compositions of a polysaccharide may vary within a population of these molecules

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A. Starch and Glycogen

• D-Glucose is stored intracellularly in polymeric forms

• Plants and fungi - starch

• Animals - glycogen

• Starch is a mixture of amylose (unbranched) and amylopectin (branched)

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Fig 8.22 Structure of amylose

(a) Amylose is a linear polymer

(b) Assumes a left-handed helical conformation in water

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Fig 8.23 Structure of amylopectin

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Fig 8.24 Action of - and -amylase on amylopectin

• -Amylase cleaves random internal -(1-4) glucosidic bonds

• -Amylase acts on nonreducing ends

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B. Cellulose and Chitin

Fig 8.25 Structure of cellulose

(a) Chair conformation

(b) Haworth projection

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Fig 8.26 Stereo view of cellulose fibrils

• Intra- and interchain H-bonding gives strength

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Fig 8.27 Structure of chitin

• Repeating units of -(1-4)GlcNAc residues

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8.7 Glycoconjugates

• Heteroglycans appear in three types of glycoconjugates:

Proteoglycans

Peptidoglycans

Glycoproteins

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A. Proteoglycans

• Proteoglycans - glycosaminoglycan-protein complexes

• Glycosaminoglycans - unbranched heteroglycans of repeating disaccharides (many sulfated hydroxyl and amino groups)

• Disaccharide components include: (1) amino sugar (D-galactosamine or D-glucosamine), (2) an alduronic acid

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Fig 8.28 Repeating disaccharide of hyaluronic acid

• GlcUA =D-glucuronate

• GlcNAc= N-acetylglucosamine

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Fig 8.29 Proteoglycan aggregate of cartilage

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B. Peptidoglycans

• Peptidoglycans - heteroglycan chains linked to peptides

• Major component of bacterial cell walls

• Heteroglycan composed of alternating GlcNAc and N-acetylmuramic acid (MurNAc)

• -(1 4) linkages connect the units

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Fig 8.30 Glycan moiety of peptidoglycan

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Fig 8.31 Structure of the peptidoglycan of S. aureus

(a) Repeating disaccharide unit, (b) Cross-linking of the peptidoglycan macromolecule

(to tetrapeptide, next slide)

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Fig. 8.31 (continued)

(to disaccharide, previous slide)

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Penicillin inhibits a transpeptidase involved in bacterial cell wall formation

• Fig 8.32 Structures of penicillin and -D-Ala-D-Ala

• Penicillin structure resembling -D-Ala-D-Ala is shown in red

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C. Glycoproteins

• Proteins that contain covalently-bound oligosaccharides

• O-Glycosidic and N-glycosidic linkages

• Oligosaccharide chains exhibit great variability in sugar sequence and composition

• Glycoforms - proteins with identical amino acid sequences but different oligosaccharide chain composition

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Four subclasses of O-glycosidic linkages

(1) GalNAc-Ser/Thr (most common)

(2) 5-Hydroxylysine (Hyl) to D-galactose (unique to collagen)

(3) Gal-Gal-Xyl-Ser-core protein

(4) GlcNAc to a single serine or threonine

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Fig. 8.33 O-Glycosidic and N-glycosidic linkages

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Fig 8.34 Four subclasses of O-glycosidic linkages

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Fig 8.35 Structures of N-linked oligosaccharides

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Fig. 8.35 (continued)