Patella Plan
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Transcript of Patella Plan
Ismail Olumegbon & Annina SaukkoJuly 14th, 2015
DAY 1
Preparation1)Take a patella out of freezer and melt it in the water bath (room temperature, 30 min)2)Saw the patella with the band saw3)Clean the band saw4)Mark the injury sites (diameter 12 mm) and control sites (8mm red)5)Saw the marks for CT with dremel to the bone (dark blue)6)Mark cross underneath the patella to the upper part to mark in which direction the patella is viewed7)take a picture and draw an image of the orientation and injuries of the sample
1)approx. time 1.5 hours
Pate
lla s
ites
secti
onin
g
OCT
Set
-up
& P
roce
dure
OCT
Set
-up
& P
roce
dure
OCT
Set
-up
& P
roce
dure
OCT measurements procedure:
With the Catheter well connected, air bubble is driven-out using a syringeThe OCT is set to live viewUsing the OCT set-up, the Patella measurement site is kept flat, parallel and close to the catheter.A distance of 1mm is maintain throughout the measurementsA pull back scan is then performed along the line of interest For each pull back, start the pull back at the initial mark on the sample along the direction of the CatheterAt a fixed distance from the start of the pull back, check for alignment using the corresponding OCT slices. The above procedure is repeated for all 13 measurement lines
OCT
Mea
sure
men
t Tim
elin
eOCT measurements Timeline:Number of measurements sites: 4Number of OCT measurements lines per site: 2Number of control measurements:5Total number of measurement lines: (4 x 2) + 5 = 13There will be 3 scans per lineTotal number of OCT scans to be measured: 13 x 3 = 39 Approximate time for the OCT measurements is 2 hours
NIR
Set
-up
& P
roce
dure
NIR
Set
-up
& P
roce
dure
NIR measurements procedure:
Keep room as dark as possible and switch on the systems, and allow the NIR lamp to warm up for 15 minutes.Optimize the integration time and averaging to be used for the whole experiment.Using the setup, ensure perpendicular alignment of the probe with the region of interest to be measured.Keep the Patella surface covered with PBS soaked gauze. Only open the region of interest, which should be sprayed with PBS every 2 mins.Bring the NIR probe as close as possible to the measurement location, and take the absorbance measurement. Export to ASCII
NIR measurement sites
NIR
Mea
sure
men
t Tim
elin
eNIR measurements Number of measurements sites: 3, Number of Locations per site: 4Number of controls: 5Total number of measurement locations: 4×3+ 5 = 17Each location will be measured 3 timesTotal number of measurements: 3 x 17 = 51Approximate time of NIR measurements is 2 hours
Mold for Patella When paraffin is cooled enough the
patella the lid, with patella clued on in, is set to the paraffin
Cooling in fridge for 15 min Cooling in freezer for ~1 h After the mold loosens from the plastic
box, the paraffin is shaped so that there is as little paraffin as possible in the edges of the mold
Approx. time 2 hours
Melting of paraffin and other preparation for the mold is done while Ismail is working on NIR measurements
Patella is glued on the lid using epoxy Gauze is used to keep the patella moist 3 coats of kitchen film under and on top
of the patella Painter’s tape is used to ensure the
flatness outside the patella
CT
• 1) Add PBS (50 – 80ml depending on the sample):
• Native CT scan with 200 µm
• Native CT scan with 100 µm
• remove the PBS
• 2) Add Hexabrix:
• CT scan with 200 µm
• CT scan with 100 µm
• wait for 45 minutes
• CT scan with 200 µm
• CT scan with 100 µm
• remove the Hexabrix
• rinse the patella in PBS (750 ml) for 2 hours
*We still need to decide whether to use verity or dual energy CT
• 3) Add PBS:
• Native CT scan with 200 µm
• Native CT scan with 100 µm
• remove PBS
• 4) Add the mixture of Hexabrix and Bi203:
• CT scan with 200 µm
• CT scan with 100 µm
• wait for 45 minutes
• CT scan with 200 µm
• CT scan with 100 µm
• Rinse in PBS (750 ml) for 2 hours
• Approx. time 8 hours
DAY 1Time Task Who Approx. time
8:00 – 11:00 Preparation I 3 hours
11:00 -13:00 NIR I 2 hours
13:00 -15:00 Mold prep. A 2 hours
13:00 – 15:00 PBS degassing I 2 hours
15:00 – 17:00 OCT I 2 hours
17:00 – 01:00 CT A 8 hours
01:00 – 01:15 Checking the thickness of the cartilage
A 15 min
01:15 – 01:30 Finishing A 15 min
total ~ 18 hours I: 9 hours A: 10,5 hours
Cut and holes 2 holes:
depth 0.5 mm, diameter 1.0 mm
depth 1.0 mm, diameter 1.4 mm
Cut: width 3.6 mm
Approx. time 20 min
Chisel for the cut
Trypsin move the trypsin from freezer to the fridge
the day before dilute trypsin with PBS (no EDTA) to 1
mg/ml warm up the trypsin in incubator 15 min to
37.5 degrees screw the patella to the holder glue the tube on the patella with super
glue cover the rest of the patella with moist
(PBS) gauze dose trypsin (10 ml) in the tube move the system to the incubator for 90
min (37.5 degrees) unscrew the patella remove the trypsin carefully detach the tube Remove the glue • approx. time 2 hours
Mec
hani
cal d
amag
e
Shocker
Mechanical damage procedure:
The region of interest on the Patella is kept perpendicular to the drop tower.The mass is gently lowered with a string through the drop tower until it touches the patella surface.The site of interest is re-align until it is parallel with the tip of the impact mass. The impact mass is then raised.
With the shocker gently fixed at the height of interest (63cm), the impact mass is lowered until it reaches this height.The shocker is then gently removed, allowing the impact mass to drop on the sample
Surf
ace
Abra
sion
Shocker
Surface Abrasion procedure:
The Instron is powered on. It is allowed to warm up. The cooler is then switched on.Calibration is done with the load cell in airUpon calibration, the Patella and holder assembly is tightly fixed to the base.The indenter is the manually lowered until the Emory paper (P60) is in contact with the flatly oriented location of interest.Using the Merlin software, a 5% strain is applied on the sample at 0.001mm/secUsing the MAX software, a 1-cycle rotation is then performed by the Instron to abrase the surface in 4sec.
t(s)0 4
DAY 2Time Task Who Appox. time
9:00 – 09:30 Cut & Holes I 30 min
9:30 – 10:15 Mech. inj. I 45 min
10:15 – 11:00 Abrasion I 1 hour
11:00 – 13:00 Trypsin A 2 hours
11:00 – 13:00 PBS Degassing I 2 hours
13:00 – 15:00 NIR I 2 hours
15:00 – 17:00 OCT I 2 hours
17:00 – 01:00 CT A 8 hours
01:00 – 01:15 Finishing the day
A 15 min
total ~ 17 hoursI: 8 hours 15 minsA: 12 hours