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P-Bibliography July 14, 2010 References [1] Parosh Aziz Abdulla, Giorgio Delzanno, and Laurent Begin. On the qual- itative analysis of conformon P systems. In David Wolfe Corne, Pierluigi Frisco, Gheorghe P˘ aun, Grzegorz Rozenberg, and Arto Salomaa, edi- tors, Membrane Computing: 9th International Workshop, volume 5391 of Lecture Notes in Computer Science, pages 78–94, 2009. [2] Oana Agrigoroaiei and Gabriel Ciobanu. Dual P systems. In David Wolfe Corne, Pierluigi Frisco, Gheorghe P˘ aun, Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Computing: 9th International Workshop, volume 5391 of Lecture Notes in Computer Science, pages 95–107, 2009. [3] Joaquin Aguado, Tudor Balanescu, Tony Cowling, Marian Gheorghe, Mike Holcombe, and Florentin Ipate. P systems with replicated rewriting and stream X-Machines (Eilenberg, machines). Fundamenta Informat- icae, 49(1-3):17–33, January 2002. Special Issue: Membrane Comput- ing (WMC-CdeA2001) Guest Editor(s): Carlos Mart´ ın-Vide, Gheorghe aun. [4] Joaqu´ ın Aguado, Tudor Balanescu, Tony Cowling, Marian Gheorghe, and Florentin Ipate. P systems with replicated rewriting and stream X- Machines. Technical Report 17/01, Rovira i Virgili University, Tarrag- ona, Spain, 2001. Technical Report 17/01 of Research Group on Mathe- matical Linguistics. [5] Joaqu´ ın Aguado, Tudor Balanescu, Tony Cowling, Marian Gheorghe, and Florentin Ipate. P systems with replicated rewriting and stream X-Machines. In Pre-Proceedings of Workshop on Membrane Computing, Curtea de Arges, Romania, August 2001. [6] S. Aguzzoli, I.I. Ardelean, D. Besozzi, B. Gerla, and C. Manara. P systems under uncertainty: the case of transmembrane proteins. In First brainstorming Workshop on Uncertainty in Membrane Computing, Palma de Mallorca, Spain, November 2004, 2004. 1

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P-Bibliography

July 14, 2010

References

[1] Parosh Aziz Abdulla, Giorgio Delzanno, and Laurent Begin. On the qual-itative analysis of conformon P systems. In David Wolfe Corne, PierluigiFrisco, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, edi-tors, Membrane Computing: 9th International Workshop, volume 5391of Lecture Notes in Computer Science, pages 78–94, 2009.

[2] Oana Agrigoroaiei and Gabriel Ciobanu. Dual P systems. In David WolfeCorne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing: 9th International Workshop,volume 5391 of Lecture Notes in Computer Science, pages 95–107, 2009.

[3] Joaquin Aguado, Tudor Balanescu, Tony Cowling, Marian Gheorghe,Mike Holcombe, and Florentin Ipate. P systems with replicated rewritingand stream X-Machines (Eilenberg, machines). Fundamenta Informat-icae, 49(1-3):17–33, January 2002. Special Issue: Membrane Comput-ing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, GheorghePaun.

[4] Joaquın Aguado, Tudor Balanescu, Tony Cowling, Marian Gheorghe,and Florentin Ipate. P systems with replicated rewriting and stream X-Machines. Technical Report 17/01, Rovira i Virgili University, Tarrag-ona, Spain, 2001. Technical Report 17/01 of Research Group on Mathe-matical Linguistics.

[5] Joaquın Aguado, Tudor Balanescu, Tony Cowling, Marian Gheorghe,and Florentin Ipate. P systems with replicated rewriting and streamX-Machines. In Pre-Proceedings of Workshop on Membrane Computing,Curtea de Arges, Romania, August 2001.

[6] S. Aguzzoli, I.I. Ardelean, D. Besozzi, B. Gerla, and C. Manara. Psystems under uncertainty: the case of transmembrane proteins. InFirst brainstorming Workshop on Uncertainty in Membrane Computing,Palma de Mallorca, Spain, November 2004, 2004.

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[7] S. Aguzzoli, D. Besozzi, B. Gerla, and C. Manara. P systems with vagueboundaries: the t-norm approach. In First brainstorming Workshopon Uncertainty in Membrane Computing, Palma de Mallorca, Spain,November 2004, 2004.

[8] M. Alfonseca, C. Castaneda Marroquin, M. De La Cruz Echeandia,R. Nunez-Hervas, and A. Ortega de la Puente. Multithread java P sys-tems running on a cluster of computers. In Pre-Proc. of the sixth Work-shop on Membrane Computing, WMC6, Vienna, Austria, pages 94–101,2005.

[9] Gordon Alford. Membrane systems with heat control. In Pre-Proceedingsof Second Workshop on Membrane Computing, Curtea de Arges, Roma-nia, August 2002.

[10] Artiom Alhazov. Generating classes of languages by P systems andother devices. In Matteo Cavaliere, Carlos Martın-Vide, and GheorghePaun, editors, Brainstorming Week on Membrane Computing, Tarrag-ona, February 5-11 2003, pages 18–22, Tarragona, February 5-11 2003.

[11] Artiom Alhazov. Minimizing evolution-communication P systems andEC P automata. In Matteo Cavaliere, Carlos Martın-Vide, and Gheo-rghe Paun, editors, Brainstorming Week on Membrane Computing, Tar-ragona, February 5-11 2003, pages 23–31, Tarragona, Spain, February5-11 2003.

[12] Artiom Alhazov. Minimizing evolution-communication P systems andautomata. New Generation Computing, 22(4):299–310, August 2004.

[13] Artiom Alhazov. A note on P systems with activators. In Gheorghe Paun,Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second Brainstorming Week on Membrane ComputingSevilla, Spain, February 2-7 2004, pages 16–19, Sevilla, Spain, February2-7 2004.

[14] Artiom Alhazov. On determinism of evolution-communication P systems.Journal of Universal Computer Science, 10(5):502–508, May 2004.

[15] Artiom Alhazov. On the power of deterministic EC P Systems. In Ghe-orghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fer-nando Sancho-Caparrini, editors, Second Brainstorming Week on Mem-brane Computing Sevilla, Spain, February 2-7 2004, pages 11–15, Sevilla,Spain, February 2-7 2004.

[16] Artiom Alhazov. Maximally parallel multiset-rewriting systems: Brows-ing the configurations. In Miguel-Angel Gutierrez-Naranjo, AgustınRiscos-Nunez, Francisco-Jose Romero-Campero, and Dragos Sburlan, ed-itors, Proceedings of the Third Brainstorming Week on Membrane Com-puting, pages 1–10, Sevilla, Spain, 2005. Fenix Editora.

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[17] Artiom Alhazov. Number of proton/bi-stable catalysts and membranein P systems. Time freeness. In Rudolf Freund, Georg Lojka, MarionOswald, and Gheorghe Paun, editors, Pre-Proc. of the Sixth Workshopon Membrane Computing, pages 102–122, Vienna, Austria, 2005.

[18] Artiom Alhazov. Solving SAT by symport/antiport P systems with mem-brane division. In Miguel-Angel Gutierrez-Naranjo, Gheorghe Paun, andMario J. Perez-Jimenez, editors, Proceedings of the ESF ExploratoryWorkshop on Cellular Computing (Complexity Aspects), pages 1–6,Sevilla, Spain, 2005. Fenix Editora.

[19] Artiom Alhazov. Communication in Membrane Systems with SymbolObjects. PhD thesis, University of Sevilla, Spain, Sevilla, Spain, 2006.

[20] Artiom Alhazov. Minimal parallelism and number of membrane polar-izations. In Hendrik-Jan Hoogeboom, Gheorghe Paun, and GrzegorzRozenberg, editors, Pre-proceedings of Membrane Computing, Interna-tional Workshop, WMC7, pages 74–87, Leiden, The Netherlands, 2006.

[21] Artiom Alhazov. Number of proton/bi-stable catalysts and membrane inP systems. Time freeness. In Rudolf Freund, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Membrane Computing, 6th In-ternational Workshop, WMC 2005, Vienna, Austria, July 18-21, 2005,Revised Selected and Invited Papers, volume 3850 of Lecture Notes inComputer Science, pages 79–95. Springer, 2006.

[22] Artiom Alhazov. P systems without multiplicities of symbol-objects.Information Processing Letters, 100(3), November 2006.

[23] Artiom Alhazov. Ciliate operations without context in a membrane com-puting framework. Romanian Journal of Information Science and Tech-nology, 10(4):315–322, 2008.

[24] Artiom Alhazov, Elena Boian, Svetlana Cojocaru, and Yurii Rogozhin.Modelling inflections in Romanian language by P systems with stringreplication. Computer Science Journal of Moldova, 17(2(50)):160–178,2009.

[25] Artiom Alhazov, Elena Boian, Svetlana Cojocaru, and Yurii Rogozhin.Modelling inflections in Romanian language by P systems with stringreplication. In Gheorghe Paun, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez, editors, Preproceedings of the Tenth Workshop on Mem-brane Computing, pages 116–128, Curtea de Arges, Romania, 2009.

[26] Artiom Alhazov, Cosmin Bonchis, Gabriel Ciobanu, and Cornel Izbasa.Encodings and arithmetic operations in P systems. In Miguel An-gel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, andFrancisco-Jose Romero-Campero, editors, Fourth Brainstorming Weekon Membrane Computing, Sevilla January 30 - February 3, 2006. Vol-ume I, pages 1–28. Fenix Editora, 2006.

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[27] Artiom Alhazov, Liudmila Burtseva, Svetlana Cojocaru, and Yurii Ro-gozhin. Computing solutions of #P-complete problems by P systems withactive membranes. In Pierluigi Frisco, David Wolfe Corne, and Gheo-rghe Paun, editors, Preproceedings of the Ninth Workshop on MembraneComputing, pages 59–70, Edinburgh, UK, 2008.

[28] Artiom Alhazov, Liudmila Burtseva, Svetlana Cojocaru, and Yurii Ro-gozhin. Solving PP-complete and #P-complete problems by P systemswith active membranes. In David Wolfe Corne, Pierluigi Frisco, Gheo-rghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors, MembraneComputing: 9th International Workshop, volume 5391 of Lecture Notesin Computer Science, pages 108–117. Springer, 2009.

[29] Artiom Alhazov and Matteo Cavaliere. Proton pumping P systems. InArtiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors, Pre-proceedings of the Workshop on Membrane Computing, pages 1–16, Tar-ragona, July 17-22 2003.

[30] Artiom Alhazov and Matteo Cavaliere. Proton pumping P systems. InCarlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing, InternationalWorkshop, WMC 2003, Tarragona, Spain July, 17-22, 2003, RevisedPapers, volume 2933 of Lecture Notes in Computer Science, pages 1–18.Springer, July 2004.

[31] Artiom Alhazov and Matteo Cavaliere. Evolution-communication P sys-tems: Time-freeness. In Proceedings of the Third Brainstorming Week onMembrane Computing, pages 11–18, Sevilla, Spain, 2005. Fenix Editora.

[32] Artiom Alhazov, Constantin Ciubotaru, Yurii Rogozhin, and SergiuIvanov. The membrane systems language class. In 2009 LA WinterSymposium, pages 12–1–12–9, Kyoto, Japan, 2010.

[33] Artiom Alhazov, Svetlana Cojocaru, Ludmila Malahova, and Yurii Ro-gozhin. Dictionary search and update by P systems with string-objectsand active membranes. International Journal of Computers, Communi-cations and Control, IV(3):206–213, 2009.

[34] Artiom Alhazov, Svetlana Cojocaru, Ludmila Malahova, and Yurii Ro-gozhin. Dictionary search and update by P systems with string-objectsand active membranes. In Rosa Gutierrez-Escudero, Miguel-AngelGutierrez-Naranjo, Gheorghe Paun, Ignacio Perez-Hurtado, and AgustınRiscos-Nunez, editors, Seventh Brainstorming Week on Membrane Com-puting, volume 1, pages 1–8, Sevilla, Spain, February 2-6 2009.

[35] Artiom Alhazov and Mario de Jesus Perez-Jimenez. Uniform solu-tion to QSAT using polarizationless active membranes. In Miguel An-gel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, andFrancisco-Jose Romero-Campero, editors, Fourth Brainstorming Week

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on Membrane Computing, Sevilla January 30 - February 3, 2006. Vol-ume I, pages 29–40. Fenix Editora, 2006.

[36] Artiom Alhazov and Mario de Jesus Perez-Jimenez. Uniform solutionof QSAT using polarizationless active membranes. In Jerome OlivierDurand-Lose and Maurice Margenstern, editors, Machines, Compu-tations, and Universality, 5th International Conference, MCU 2007,Orleans, France, September 10-13, 2007, Proceedings, volume 4664 ofLecture Notes in Computer Science, pages 122–133. Springer, 2007.

[37] Artiom Alhazov and Rudolf Freund. On the efficiency of P systems withactive membranes and two polarizations. In Giancarlo Mauri, GheorghePaun, and Claudio Zandron, editors, Pre-proceedings of the Fifth Work-shop on Membrane Computing, pages 81–94, Milano, Italy, June 2004.

[38] Artiom Alhazov and Rudolf Freund. On the efficiency of P systems withactive membranes and two polarizations. In Giancarlo Mauri, GheorghePaun, Mario J. Perez-Jimenez, Grzegorz Rozenberg, and Arto Salomaa,editors, International Workshop WMC5, Milano, Italy, 2004, volume3365 of Lecture Notes in Computer Science, pages 146–160. Springer,2005.

[39] Artiom Alhazov and Rudolf Freund. P systems with one membrane andsymport/antiport rules of five symbols are computationally complete. InProceedings of the Third Brainstorming Week on Membrane Computing,pages 19–28, Sevilla, Spain, 2005. Fenix Editora.

[40] Artiom Alhazov, Rudolf Freund, Alberto Leporati, Marion Oswald, andClaudio Zandron. (tissue) P systems with unit rules and energy as-signed to membranes. Fundamenta Informaticae, 74(4):391–408, Decem-ber 2006.

[41] Artiom Alhazov, Rudolf Freund, and Kenichi Morita. Reversibility anddeterminism in sequential multiset rewriting. In Cristian S. Calude,Masami Hagiya, Kenichi Morita, Grzegorz Rozenberg, and Jon Timmis,editors, Unconventional Computation: 9th International Conference, UC2010, Tokyo, Japan, June 21-25, 2010. Proceedings, volume 6079 of Lec-ture Notes in Computer Science, pages 21–31. Springer, 2010.

[42] Artiom Alhazov, Rudolf Freund, and Marion Oswald. Symbol / mem-brane complexity of P systems with symport / antiport rules. In RudolfFreund, Georg Lojka, Marion Oswald, and Gheorghe Paun, editors, Pre-Proc. of the Sixth Workshop on Membrane Computing, pages 123–146,Vienna, Austria, 2005.

[43] Artiom Alhazov, Rudolf Freund, and Marion Oswald. Tissue P systemswith antiport rules and small numbers of symbols and cells. In Cleliade Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International Conference, DLT 2005, Palermo, Italy, July 4-8,

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2005, Proceedings, volume 3572 of Lecture Notes in Computer Science,pages 100–111. Springer, 2005.

[44] Artiom Alhazov, Rudolf Freund, and Marion Oswald. Tissue P sys-tems with antiport rules and small numbers of symbols and cells. InProceedings of the ESF Exploratory Workshop on Cellular Computing(Complexity Aspects), pages 7–22, Sevilla, Spain, 2005. Fenix Editora.

[45] Artiom Alhazov, Rudolf Freund, and Marion Oswald. Cell/symbol com-plexity of tissue P systems with symport/antiport rules. InternationalJournal of Foundations of Computer Science, 17(1):3–25, February 2006.

[46] Artiom Alhazov, Rudolf Freund, and Marion Oswald. Symbol/membranecomplexity of P systems with symport/antiport rules. In Rudolf Freund,Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors, Mem-brane Computing, 6th International Workshop, WMC 2005, Vienna,Austria, July 18-21, 2005, Revised Selected and Invited Papers, volume3850 of Lecture Notes in Computer Science, pages 96–113. Springer, 2006.

[47] Artiom Alhazov, Rudolf Freund, Marion Oswald, and Marija Slavkovik.Extended spiking neural P systems. In Hendrik-Jan Hoogeboom, Ghe-orghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors, Mem-brane Computing, 7th International Workshop, WMC 2006, Leiden, TheNetherlands, July 17-21, 2006, Revised, Selected, and Invited Papers, vol-ume 4361 of Lecture Notes in Computer Science, pages 123–134. Springer,2006.

[48] Artiom Alhazov, Rudolf Freund, Marion Oswald, and Marija Slavkovik.Extended spiking neural p systems generating strings and vectors of non-negative integers. In Hendrik-Jan Hoogeboom, Gheorghe Paun, andGrzegorz Rozenberg, editors, Pre-proceedings of Membrane Computing,International Workshop, WMC7, pages 88–101, Leiden, The Nether-lands, 2006.

[49] Artiom Alhazov, Rudolf Freund, Marion Oswald, and Sergey Verlan. Par-tial halting in P systems using membrane rules with permitting contexts.In Jerome Olivier Durand-Lose and Maurice Margenstern, editors, Ma-chines, Computations, and Universality, 5th International Conference,MCU 2007, Orleans, France, September 10-13, 2007, Proceedings, vol-ume 4664 of Lecture Notes in Computer Science, pages 110–121. Springer,2007.

[50] Artiom Alhazov, Rudolf Freund, Marion Oswald, and Sergey Verlan.Partial versus total halting in P systems. In Miguel-Angel Gutierrez-Naranjo, Gheorghe Paun, Alvaro Romero-Jimenez, and Agustın Riscos-Nunez, editors, Proceedings of the Fifth Brainstorming Week on Mem-brane Computing, pages 1–20, Sevilla (Spain), January 29th - February2 2007. Fenix Editora.

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[51] Artiom Alhazov, Rudolf Freund, Marion Oswald, and Sergey Verlan. Par-tial halting and minimal parallelism based on arbitrary rule partitions.Fundamenta Informaticae, 91(1):17–34, April 2009.

[52] Artiom Alhazov, Rudolf Freund, and Gheorghe Paun. P systems withactive membranes and two polarizations. In Gheorghe Paun, AgustınRiscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini,editors, Second Brainstorming Week on Membrane Computing Sevilla,Spain, February 2-7 2004, pages 20–36, Sevilla, Spain, February 2-7 2004.

[53] Artiom Alhazov, Rudolf Freund, and Gheorghe Paun. Computationalcompleteness of P systems with active membranes and two polariza-tions. In Maurice Margenstern, editor, Machines, Computations, andUniversality: 4th International Conference, MCU2004, Saint Petersburg,Russia, September 21-24, 2004, Revised Selected Papers, volume 3354 ofLecture Notes in Computer Science, pages 178–189. Springer, 2005.

[54] Artiom Alhazov, Rudolf Freund, and Agustın Riscos-Nunez. One andtwo polarizations, membrane creation and objects complexity in P sys-tems. In Seventh International Symposium on Symbolic and NumericAlgorithms for Scientific Computing, SYNASC 05, pages 385–394. IEEEComputer Society, 2005.

[55] Artiom Alhazov, Rudolf Freund, and Agustın Riscos-Nunez. One andtwo polarizations, membrane creation and objects complexity in P sys-tems. In Gabriel Ciobanu and Gheorghe Paun, editors, Pre-Proc. of FirstInternational Workshop on Theory and Application of P Systems, pages9–18, Timisoara, Romania, 2005.

[56] Artiom Alhazov, Rudolf Freund, and Agustın Riscos-Nunez. Membranedivision, restricted membrane creation and object complexity in P sys-tems. International Journal of Computer Mathematics, 83(7):529–548,2006.

[57] Artiom Alhazov, Rudolf Freund, and Yurii Rogozhin. Some optimalresults on symport/antiport P systems with minimal cooperation. InProceedings of the ESF Exploratory Workshop on Cellular Computing(Complexity Aspects), pages 23–36, Sevilla, Spain, 2005. Fenix Editora.

[58] Artiom Alhazov, Rudolf Freund, and Yurii Rogozhin. Computationalpower of symport/antiport: History, advances and open problems. InRudolf Freund, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa,editors, Membrane Computing, 6th International Workshop, WMC 2005,Vienna, Austria, July 18-21, 2005, Revised Selected and Invited Papers,volume 3850 of Lecture Notes in Computer Science, pages 1–30. Springer,2006.

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[59] Artiom Alhazov and Tseren-Onolt Ishdorj. Membrane operations in Psystems with active membranes. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing Sevilla,Spain, February 2-7 2004, pages 37–44, Sevilla, Spain, February 2-7 2004.

[60] Artiom Alhazov, Alexander Krassovitskiy, Yurii Rogozhin, and SergeyVerlan. A note on p systems with small-size insertion and deletion. InGheorghe Paun, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez, ed-itors, Preproceedings of the Tenth Workshop on Membrane Computing,pages 534–537, Curtea de Arges, Romania, 2009.

[61] Artiom Alhazov, Alexander Krassovitskiy, Yurii Rogozhin, and SergeyVerlan. P systems with minimal insertion and deletion. In RosaGutierrez-Escudero, Miguel-Angel Gutierrez-Naranjo, Gheorghe Paun,Ignacio Perez-Hurtado, and Agustın Riscos-Nunez, editors, SeventhBrainstorming Week on Membrane Computing, volume 1, pages 9–21,Sevilla, Spain, February 2-6 2009.

[62] Artiom Alhazov, Maurice Margenstern, Vladimir Rogozhin, Yurii Ro-gozhin, and Sergey Verlan. Communicative P systems with minimal co-operation. In Giancarlo Mauri, Gheorghe Paun, Mario J. Perez-Jimenez,Grzegorz Rozenberg, and Arto Salomaa, editors, International WorkshopWMC5, Milano, Italy, 2004, volume 3365 of Lecture Notes in ComputerScience, pages 146–160. Springer, 2005.

[63] Artiom Alhazov, Maurice Margenstern, and Sergey Verlan. Fast syn-chronization in P systems. In Pierluigi Frisco, David Wolfe Corne, andGheorghe Paun, editors, Preproceedings of the Ninth Workshop on Mem-brane Computing, pages 71–84, Edinburgh, UK, 2008.

[64] Artiom Alhazov, Maurice Margenstern, and Sergey Verlan. Fast synchro-nization in P systems. In David Wolfe Corne, Pierluigi Frisco, GheorghePaun, Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Com-puting: 9th International Workshop, volume 5391 of Lecture Notes inComputer Science, pages 118–128. Springer, 2009.

[65] Artiom Alhazov, Carlos Martın-Vide, and Linqiang Pan. Solving aPSPACE-complete problem by recognizing P systems with restricted ac-tive membranes. Fundamenta Informaticae, 58(2):67–77, 2003.

[66] Artiom Alhazov, Carlos Martın-Vide, and Linqiang Pan. Solving GraphProblems by P Systems with Restricted Elementary Active Membranes,volume 2950 of Lecture Notes in Computer Science, pages 1–22. Springer,2004.

[67] Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors. Pre-proceedings of the Workshop on Membrane Computing Tarragona, July17-22 2003, 2003.

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[68] Artiom Alhazov and Kenichi Morita. On reversibility and determinismin P systems. In Gheorghe Paun, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez, editors, Preproceedings of the Tenth Workshop on Mem-brane Computing, pages 129–140, Curtea de Arges, Romania, 2009.

[69] Artiom Alhazov and Kenichi Morita. A short note on reversibilityin P systems. In Rosa Gutierrez-Escudero, Miguel-Angel Gutierrez-Naranjo, Gheorghe Paun, Ignacio Perez-Hurtado, and Agustın Riscos-Nunez, editors, Seventh Brainstorming Week on Membrane Computing,volume 1, pages 23–28, Sevilla, Spain, February 2-6 2009.

[70] Artiom Alhazov and Kenichi Morita. On reversibility and determin-ism in P systems. In Gheorghe Paun, Mario J. Perez-Jimenez, AgustınRiscos-Nunez, Grzegorz Rozenberg, and Arto Salomaa, editors, Mem-brane Computing, 10th International Workshop, WMC 2009, Curtea deArges, Romania, August 24-27, 2009. Revised Selected and Invited Pa-pers, volume 5957 of Lecture Notes in Computer Science, pages 158–168.Springer, 2010.

[71] Artiom Alhazov and Linqiang Pan. Polarizationless P systems with ac-tive membranes. Grammars, 7:141–159, 2004.

[72] Artiom Alhazov, Linqiang Pan, and Gheorghe Paun. Trading polariza-tions for labels in P systems with active membranes. Acta Informatica,41(2-3):111–144, December 2004.

[73] Artiom Alhazov and Yurii Rogozhin. Minimal cooperation in sym-port/antiport P systems with one membrane. In Proceedings of the ThirdBrainstorming Week on Membrane Computing, pages 29–34, Sevilla,Spain, 2005. Fenix Editora.

[74] Artiom Alhazov and Yurii Rogozhin. Generating languages by P sys-tems with minimal symport/antiport. The Computer Science Journal ofMoldova, 14(3):299–323, 2006.

[75] Artiom Alhazov and Yurii Rogozhin. Towards a characterization of P sys-tems with minimal symport/antiport and two membranes. In Hendrik-Jan Hoogeboom, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salo-maa, editors, Membrane Computing, 7th International Workshop, WMC2006, Leiden, The Netherlands, July 17-21, 2006, Revised, Selected, andInvited Papers, volume 4361 of Lecture Notes in Computer Science, pages135–153. Springer, 2006.

[76] Artiom Alhazov and Yurii Rogozhin. Towards a characterization of P sys-tems with minimal symport/antiport and two membranes. In Hendrik-Jan Hoogeboom, Gheorghe Paun, and Grzegorz Rozenberg, editors, Pre-proceedings of Membrane Computing, International Workshop, WMC7,pages 102–118, Leiden, The Netherlands, 2006.

9

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[77] Artiom Alhazov and Yurii Rogozhin. Skin output in P systems withminimal symport/antiport and two membranes. In George Eleftherakis,Petros Kefalas, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa,editors, Membrane Computing, 8th International Workshop, WMC 2007,Thessaloniki, Greece, June 25-28, 2007 Revised Selected and Invited Pa-pers, volume 4860 of Lecture Notes in Computer Science, pages 97–112.Springer, 2007.

[78] Artiom Alhazov and Yurii Rogozhin. Skin output in P systems withminimal symport/antiport and two membranes. In George Elefther-akis, Petros Kefalas, and Gheorghe Paun, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 99–110,Thessaloniki, Greece, 2007.

[79] Artiom Alhazov, Yurii Rogozhin, and Sergey Verlan. Symport/antiporttissue P systems with minimal cooperation. In Proceedings of the ESF Ex-ploratory Workshop on Cellular Computing (Complexity Aspects), pages37–52, Sevilla, Spain, 2005. Fenix Editora.

[80] Artiom Alhazov, Yurii Rogozhin, and Sergey Verlan. Minimal cooper-ation in symport/antiport tissue P systems. International Journal ofFoundations of Computer Science, 18(1):163–180, February 2007.

[81] Artiom Alhazov and Dragos Sburlan. Static sorting algorithms for P sys-tems. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, ed-itors, Preproceedings of the Workshop on Membrane Computing, pages17–40, Tarragona, July 17-22 2003.

[82] Artiom Alhazov and Dragos Sburlan. (Ultimately confluent) parallelmultiset-rewriting systems with context. In Gheorghe Paun, AgustınRiscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini,editors, Second Brainstorming Week on Membrane Computing Sevilla,Spain, February 2-7 2004, pages 45–52, Sevilla, Spain, February 2-7 2004.

[83] Artiom Alhazov and Dragos Sburlan. (Ultimately confluent) parallelmultiset-rewriting systems with permitting context. In Giancarlo Mauri,Gheorghe Paun, and Claudio Zandron, editors, Pre-proceedings of theFifth Workshop on Membrane Computing, pages 95–103, Milano, Italy,June 2004.

[84] Artiom Alhazov and Dragos Sburlan. Static Sorting P Systems, pages215–252. Springer-Verlag, 2005.

[85] Artiom Alhazov and Dragos Sburlan. Ultimately confluent rewriting sys-tems. Parallel multiset-rewriting with permitting or forbidding contexts.In Giancarlo Mauri, Gheorghe Paun, Mario J. Perez-Jimenez, GrzegorzRozenberg, and Arto Salomaa, editors, International Workshop WMC5,Milano, Italy, 2004, volume 3365 of Lecture Notes in Computer Science,pages 178–189. Springer, 2005.

10

Page 11: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[86] Artiom Alhazov and Sergey Verlan. Sevilla carpets of deterministic non-cooperative P systems. In Proceedings of the ESF Exploratory Work-shop on Cellular Computing (Complexity Aspects), pages 53–60, Sevilla,Spain, 2005. Fenix Editora.

[87] Artiom Alhazov and Sergey Verlan. Minimization strategies for maxi-mally parallel multiset rewriting systems. Technical Report 862, TurkuCentre for Computer Science, 2008.

[88] Santiago Alonso, Fernando Arroyo Luis Fernandez, and Javier Gil. Mainmodules design for a HW implementation of massive parallelism in tran-sition P systems. In Masanori Sugisaka and Hiroshi Tanaka, editors, 13thInternational Symposium on Artificial Life and Robotics, pages 500–504,2008.

[89] B. Aman and G. Ciobanu. Translating mobile ambients into p systems.In N. Busi and C. Zandron, editors, Proceedings MeCBIC 2006, Venice,2006.

[90] B. Aman and G. Ciobanu. On the reachability problem in P systemswith mobile membranes. In G. Eleftherakis and Gh. Paun P. Kefalas,editors, Pre-proceedings of Membrane Computing, International Work-shop - WMC8, pages 111–123, Thessaloniki, Greece, 2007.

[91] Bogdan Aman and Gabriel Ciobanu. Membrane systems with surfaceobjects. In Erzsebet Csuhaj-Varju, Rudolf Freund, Marion Oswald,and Kai Salomaa, editors, International Workshop on Computing withBiomolecules, pages 17–28, 2008.

[92] Bogdan Aman and Gabriel Ciobanu. Resource competition and synchro-nization in membranes. In Tudor Jebelean, Viorel Negru, Dana Petcu,and Daniela Zaharie, editors, Proceedings of the 10th International Sym-posium on Symbolic and Numeric Algorithms for Scientific Computing,2008.

[93] O. Andrei, G. Ciobanu, and D. Lucanu. Operational semantics andrewriting logic in membrane computing. In Proceedings SOS Workshop(to appear in ENTCS), 2005.

[94] O. Andrei, G. Ciobanu, and D. Lucanu. Expressing control mechanismsin p systems by rewriting strategies. In H.J. Hoogeboom, Gh. Paun, andG. Rozenberg, editors, Pre-proceedings of Membrane Computing, Inter-national Workshop, WMC7, pages 119–131, Leiden, The Netherlands,2006.

[95] O. Andrei, G. Ciobanu, and D. Lucanu. Strategies in membrane com-puting. In BWMC4, Sevilla, 2006.

11

Page 12: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[96] O. Andrei, G. Ciobanu, and D. Lucanu. A rewriting logic frameworkfor operational semantics of membrane systems. Theoretical ComputerScience, 373(3):163–181, 2007.

[97] Oana Andrei, Gabriel Ciobanu, and Dorel Lucanu. Rewriting P systemsin maude. In Pre-proceedings of the Fifth Workshop on Membrane Com-puting (WMC5), Milano, Italy, June 2004, pages 104–118, Milano, Italy,June 2004.

[98] Subbaiah Annadurai, Thiyagarajan Kalyani, Vincent Rajkumar Dare,and Durairaj Gnanaraj Thomas. P systems generating iso-picture lan-guages. Progress in Natural Science, 18(5):617–622, 2008.

[99] Subbaiah Annadurai, Thiyagarajan Kalyani, Vincent Rajkumar Dare,and Durairaj Gnanaraj Thomas. Trajectory P systems. Progress inNatural Science, 18(5):611–616, 2008.

[100] Ioannis Antoniou, Cristian Calude, and Michael J. Dinneen, editors. Un-conventional Models of Computation, UMC’2K, Proceedings of the Sec-ond International Conference, Brussel, Belgium, 13-16 December 2000.Springer, 2001.

[101] A. Apostolos. Generalized fuzzy multisets and P systems. Submitted,2005.

[102] I. Ardelean. Could p systems model energy-sensing behavior in bacteria?In in G. Ciobanu, Gh. Paun, Pre-Proc. of First International Workshopon Theory and Application of P Systems, Timisoara, Romania, Septem-ber 26-27, pages 19–26, 2005.

[103] I. Ardelean. Biological roots and applications of p systems. further sug-gestions. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Membrane Computing, International Workshop, WMC7,pages 1–7, Leiden, The Netherlands, 2006.

[104] I. Ioan Ardelean and Daniela Besozzi. Some notes on the interplay be-tween P systems and chemotaxis in bacteria. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Francisco JoseRomero-Campero, editors, Fourth Brainstorming Week on MembraneComputing, Sevilla, January 30 - February 3, 2006. Volume I, pages41–48. Fenix Editora, 2006.

[105] I.I. Ardelean, M. Cavaliere, and D. Sburlan. Computing using signals:from cells to p systems. Soft Computing, 9(9):631–639, September 2005.

[106] I.I. Ardelean, M. Ignat, and C. Moisescu. Magnetotactic bacteria andtheir significance for p systems and nanoactuators. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, and A. Nunez, editors, Proceed-ings of the Fifth Brainstorming Week on Membrane Computing, pages21–32, Sevilla (Spain), January 29th - February 2 2007.

12

Page 13: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[107] Ioan I. Ardelean. The relevance of cell membranes for P systems. Generalaspects. Fundamenta Informaticae, 49(1-3):35–43, January 2002. Spe-cial Issue: Membrane Computing (WMC-CdeA2001) Guest Editor(s):Carlos Martın-Vide, Gheorghe Paun.

[108] Ioan I. Ardelean. The relevance of microbiology for P systems. a dis-cussion of some concepts used in microbiology and P Systems. In Pre-Proceedings of Second Workshop on Membrane Computing, Curtea deArges, Romania, August 2002.

[109] Ioan I. Ardelean. Molecular biology of bacteria and its relevance for P sys-tems. In Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Clau-dio Zandron, editors, Membrane Computing: International Workshop,WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002. Re-vised Papers., volume 2597 of Lecture Notes in Computer Science, pages1–18, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[110] Ioan I. Ardelean and Daniela Besozzi. Mechanosensitive channels, a hottopic in (micro)biology: any excitement for P systems? Technical Re-port 26, Rovira i Virgili University, 2003.

[111] Ioan I. Ardelean and Daniela Besozzi. Mechanosensitive channels, a hottopic in (micro)Biology: any excitement for P systems? In Matteo Cav-aliere, Carlos Martın-Vide, and Gheorghe Paun, editors, BrainstormingWeek on Membrane Computing, Tarragona, February 5-11 2003, pages32–36, Tarragona, February 5-11 2003.

[112] Ioan I. Ardelean and Daniela Besozzi. New proposals for the formaliza-tion of membrane proteins. Technical Report 01/2004, Dept. of Com-puter Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[113] Ioan I. Ardelean and Daniela Besozzi. New proposals for the formal-ization of membrane proteins. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 53–59, Sevilla, Spain, February 2-7 2004.

[114] Ioan I. Ardelean and Daniela Besozzi. On modelling ion fluxes acrossbiological membranes with P systems. In Proceedings of the Third Brain-storming Week on Membrane Computing, Sevilla (Spain), January 31st- February 4th, pages 35–42, 2005.

[115] Ioan I. Ardelean, Daniela Besozzi, M.H. Garzon, Giancarlo Mauri, andS. Roy. P System Models for Mechanosensitive Channels, pages 43–80.Springer-Verlag, 2005.

[116] Ioan I. Ardelean, Daniela Besozzi, and Corrado Manara. Aerobic res-piration is a bio-logic circuit containing molecular logic gates. In Pre-proceedings of the Fifth Workshop on Membrane Computing (WMC5),Milano, Italy, June 2004, pages 119–125, Milano, Italy, June 2004.

13

Page 14: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[117] Ioan I. Ardelean and Matteo Cavaliere. Modelling biological processes byusing a probabilistic P system software. Natural Computing, 2(2):173–197, July 2003.

[118] Ioan I. Ardelean and Matteo Cavaliere. Playing with a probabilisticP system simulator: Mathematical and biological problems. TechnicalReport 26, Rovira i Virgili University, 2003.

[119] Ioan I. Ardelean and Matteo Cavaliere. Playing with a probabilistic Psystem simulator: Mathematical and biological problems. In Matteo Cav-aliere, Carlos Martın-Vide, and Gheorghe Paun, editors, BrainstormingWeek on Membrane Computing, Tarragona, February 5-11 2003, pages37–45, Tarragona, February 5-11 2003.

[120] Ioan I. Ardelean, Matteo Cavaliere, and Dragos Sburlan. Computingusing signals: From cells to P systems. Technical Report 01/2004, Dept.of Computer Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[121] Ioan I. Ardelean, Matteo Cavaliere, and Dragos Sburlan. Computingusing signals: From cells to P systems. In Gheorghe Paun, AgustınRiscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini,editors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 60–73, Sevilla, Spain, February 2-7 2004.

[122] F. Arroyo, J. Castellanos, L. Fernandez, V.J. Martinez, and L.F. Mingo.Software tools/ p system simulators interoperability. In Pre-Proc. ofthe sixth Workshop on Membrane Computing, WMC6, Vienna, Austria,pages 147–161, 2005.

[123] Fernando Arroyo, Angel Baranda, Juan Castellanos, and Gheorghe Paun.Membrane computing: The power of (rule) creation. Journal of UniversalComputer Science, 8(3):369–381, 2002.

[124] Fernando Arroyo, Angel V. Baranda, Juan Castellanos, Carmen Luengo,and Luis F. Mingo. A recursive algorithm for describing evolution intransition P systems. Technical Report 17/01, Rovira i Virgili University,Tarragona, Spain, 2001. Technical Report 17/01 of Research Group onMathematical Linguistics.

[125] Fernando Arroyo, Angel V. Baranda, Juan Castellanos, Carmen Luengo,and Luis F. Mingo. A recursive algorithm for describing evolution intransition P systems. In Pre-Proceedings of Workshop on MembraneComputing, Curtea de Arges, Romania, August 2001.

[126] Fernando Arroyo, Angel V. Baranda, Juan Castellanos, Carmen Luengo,and Luis F. Mingo. Structures and bio-language to simulate transitionP systems on digital computers. In Cristian Calude, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Multiset Processing:Mathematical, Computer Science, and Molecular Computing Points of

14

Page 15: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

View, volume 2235 of Lecture Notes in Computer Science, pages 1–16.Springer-Verlag, 2001.

[127] Fernando Arroyo, Juan Castellanos, Carmen Luengo, and Luis F. Mingo.A binary data structure for membrane processors: Connectivity ar-rays. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Membrane Computing, Interna-tional Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Re-vised Papers, volume 2933 of Lecture Notes in Computer Science, pages19–30. Springer, July 2003.

[128] Fernando Arroyo, Carmen Luengo, Angel V. Baranda, and L.F.de Mingo. A software simulation of transition P systems in Haskell. InPre-Proceedings of Second Workshop on Membrane Computing, Curteade Arges, Romania, August 2002.

[129] Fernando Arroyo, Carmen Luengo, Angel V. Baranda, and Luis F.de Mingo. A software simulation of transition P systems in Haskell. InGheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Claudio Zan-dron, editors, Membrane Computing: International Workshop, WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002. RevisedPapers., volume 2597 of Lecture Notes in Computer Science, pages 19–32, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[130] Fernando Arroyo, Carmen Luengo, Juan Castellanos, and L.F. de Mingo.A binary data structure for membrane processors: Connectivity arrays.In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors,Preproceedings of the Workshop on Membrane Computing, pages 41–52.,Tarragona, July 17-22 2003.

[131] Fernando Arroyo, Carmen Luengo, Juan Castellanos, and L.F. de Mingo.Representing multisets and evolution rules in membrane processors.In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 126–137, Milano, Italy, June2004.

[132] Fernando Arroyo, Carmen Luengo, Luis Fernandez, Luis F. de Mingo,and Juan Castellanos. Simulating membrane systems in digital com-puters. International Journal ”Information Theories & Applications”,11(1):29–34, 2004.

[133] Fernando Arroyo-Montoro. Structures and Biolanguage to SimulateMembrane Computing. PhD thesis, Departamento de Inteligencia Ar-tificial. Facultad de Informatica. Universidad Politecnica de Madrid,Madrid, Spain, June 2004.

[134] Joshua J. Arulanandham. Implementing bead-sort with P systems. InCristian Calude, Michael J. Dinneen, and Ferdinand Peper, editors, Un-conventional Models of Computation: Third International Conference,

15

Page 16: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

UMC 2002, Kobe, Japan, October 15-19, 2002. Proceedings, volume 2509of Lecture Notes In Computer Science, pages 115–125, London, UK, Oc-tober 15–19 2002. Springer-Verlag Heidelberg.

[135] Adrian Atanasiu. Authentication of messages using P systems. In Pre-Proceedings of Second Workshop on Membrane Computing, Curtea deArges, Romania, August 2002.

[136] Adrian Atanasiu. Authentication of messages using P systems. In Ghe-orghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Claudio Zandron,editors, Membrane Computing: International Workshop, WMC-CdeA2002, Curtea de Arges, Romania, August 19-23, 2002. Revised Papers.,volume 2597 of Lecture Notes in Computer Science, pages 33–42, Curteade Arges, Romania, July 2003. Springer-Verlag, Berlin.

[137] Adrian Atanasiu and Carlos Martın-Vide. P systems and context-freelanguages. Technical Report 14/00, Rovira i Virgili University, Tarrag-ona, Spain, 2000. Technical Report 14/00 of Research Group on Mathe-matical Linguistics.

[138] Adrian Atanasiu and Carlos Martın-Vide. Arithmetic with membranes.Romanian Journal of Information Science and Technology, 4(1-2):5–20,2001.

[139] Adrian Atanasiu and Carlos Martın-Vide. Recursive calculus with mem-branes. Technical Report 17/01, Rovira i Virgili University, Tarragona,Spain, 2001. Technical Report 17/01 of Research Group on MathematicalLinguistics.

[140] Adrian Atanasiu and Carlos Martın-Vide. Recursive calculus with mem-branes. In Pre-Proceedings of Workshop on Membrane Computing,Curtea de Arges, Romania, August 2001.

[141] Adrian Atanasiu and Carlos Martın-Vide. Recursive calculus with mem-branes. Fundamenta Informaticae, 49(1-3):45–59, January 2002. SpecialIssue: Membrane Computing (WMC-CdeA2001) Guest Editor(s): Car-los Martın-Vide, Gheorghe Paun.

[142] J. Auld, L. Bianco, G. Ciobanu, M. Gheorghe, D. Pescini, and F.J.Remero-Campero. The use of p systems for the study of colonies. InH.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedingsof Membrane Computing, International Workshop, WMC7, pages 15–20,Leiden, The Netherlands, 2006.

[143] Tudor Balanescu, Marian Gheorghe, Mike Holcombe, and FlorentinIpate. A variant of EP systems. In Pre-Proceedings of Second Workshopon Membrane Computing, Curtea de Arges, Romania, August 2002.

16

Page 17: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[144] Tudor Balanescu, Marian Gheorghe, Mike Holcombe, and FlorentinIpate. Eilenberg P systems. In Gheorghe Paun, Grzegorz Rozenberg,Arto Salomaa, and Claudio Zandron, editors, Membrane Computing:International Workshop, WMC-CdeA 2002, Curtea de Arges, Romania,August 19-23, 2002. Revised Papers., volume 2597 of Lecture Notes inComputer Science, pages 43–57, Curtea de Arges, Romania, July 2003.Springer-Verlag, Berlin.

[145] Delia Balbotin-Noval, Mario Jesus Perez Jimenez, and Fernando SanchoCaparrini. A MzScheme implementation of transition P systems. In Ghe-orghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Claudio Zandron,editors, Membrane Computing: International Workshop, WMC-CdeA2002, Curtea de Arges, Romania, August 19-23, 2002. Revised Papers.,volume 2597 of Lecture Notes in Computer Science, pages 58–73, Curteade Arges, Romania, July 2003. Springer-Verlag, Berlin.

[146] Delia Balbotin-Noval, Mario Jesus Perez-Jimenez, and Fernando Sancho-Caparrini. A MzScheme implementation of transition P systems. InPre-Proceedings of Second Workshop on Membrane Computing, Curteade Arges, Romania, August 2002.

[147] Angel V. Baranda, Juan Castellanos, Fernando Arroyo, and Rafael Gon-zalo. Towards an electronic implementation of membrane computing: Aformal description of nondeterministic evolution in transition P systems.In Natasha Jonoska and N.C. Seeman, editors, Proc. 7th Intern. Meetingon DNA Based Computers, pages 273–282, Tampa, Florida, USA, 2001.

[148] Angel V. Baranda, Juan Castellanos, Fernando Arroyo, and Carmen Lu-engo. Bio-language for computing with membranes. In Jozef Kelemenand Petr Sosik, editors, Advances in Artificial Life : 6th European Con-ference, ECAL 2001, Prague, Czech Republic, September 10-14, 2001,Proceedings., volume 2159 of LNAI, pages 176–185, Praga, September2001. Springer-Verlag.

[149] Angel V. Baranda, Juan Castellanos, Rafael Gonzalo, Fernando Arroyo,and Luis-F. Mingo. Data structures for implementing transition P sys-tems in silico. Romanian Journal of Information Science and Technology,4(1-2):21–32, 2001.

[150] N. Barbacari, A. Profir, and C. Zelinschi. Gene regulatory network mod-elling by means of membrane systems. In Pre-Proc. of the sixth Work-shop on Membrane Computing, WMC6, Vienna, Austria, pages 162–178,2005.

[151] R. Barbuti, A. Maggiolo-Schettini, P. Milazzo, and A. Troina. Thecalculus of looping sequences for modeling biological membranes. InG. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 57–80,Thessaloniki, Greece, 2007.

17

Page 18: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[152] Roberto Barbuti, Giulio Caravagna, Andrea Maggiolo-Schettini, PaoloMilazzo, and Giovanni Pardini. The calculus of looping sequences. InMarco Bernardo, Pierpaolo Degano, and Gianluigi Zavattaro, editors,Formal Methods for Computational Systems Biology, volume 5016 of Lec-ture Notes in Computer Science, pages 387–423, 2008.

[153] Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, and LucaTesei. Timed P automata. In Gabriel Ciobanu, editor, Second Interna-tional Meeting on Membrane Computing and Biologically Inspired Pro-cess Calculi, pages 53–67, 2008.

[154] Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, and SimoneTini. Compositional semantics and behavioral equivalences for P sys-tems. Theoretical Computer Science, 395(1):77–100, 2008.

[155] Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, and SimoneTini. A P systems flat form preserving step-by-step behaviour. Funda-menta Informaticae, 87(1):1–34, 2008.

[156] Roberto Barbuti, Andrea Maggiolo-Schettini, Paolo Milazzo, and AngeloTroina. Bisimulations in calculi modelling membranes. Formal Aspectsof Computing, 20(4-5):351–377, 2008.

[157] J. Bartosik. Heaps of pieces and paun’s systems. In Proceedings of theSecond Conference on Tools and Methods of Data Transformation. WSUKielce, 2004.

[158] J. Bartosik. Paun’s systems in modeling of human resource management.In Proceedings of the Second Conference on Tools and Methods of DataTransformation. WSU Kielce, 2004.

[159] J. Bartosik. Membrany dynamicsne w modelowaniu systemow eko-nomicznych. In Conf. Bad. Oper. i Syst., 2006.

[160] J. Bartosik and Waldemar Korczynski. Systemy membranowe jakomodele hierarchicznych struktur zarzadzania. In Mat. Pokonferen-cyjne Ekonomia, Informatyka, Zarzadzanie. Teoria i Praktyka. WydzialZarzadzania AGH, Tom II, AGH, 2002.

[161] Gemma Bel-Enguix. P systems, a preliminary application to linguis-tics. In Pre-Proceedings of Second Workshop on Membrane Computing,Curtea de Arges, Romania, August 2002.

[162] Gemma Bel-Enguix. Preliminaries about some possible applications ofP systems in linguistics. In Gheorghe Paun, Grzegorz Rozenberg, ArtoSalomaa, and Claudio Zandron, editors, Membrane Computing: Interna-tional Workshop, WMC-CdeA 2002, Curtea de Arges, Romania, August19-23, 2002. Revised Papers., volume 2597 of Lecture Notes in ComputerScience, pages 74–89, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

18

Page 19: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[163] Gemma Bel-Enguix. Analyzing P systems structure: Working, predic-tions, and some linguistic suggestions. In Pre-proceedings of the FifthWorkshop on Membrane Computing (WMC5), Milano, Italy, June 2004,pages 138–150, Milano, Italy, June 2004.

[164] Gemma Bel-Enguix, Matteo Cavaliere, Rodica Ceterchi, Radu Grama-tovici, and Carlos Martın-Vide. An application of dynamic P systems:Generating context-free languages. In Gheorghe Paun, Grzegorz Rozen-berg, Arto Salomaa, and Claudio Zandron, editors, Membrane Com-puting: International Workshop, WMC-CdeA 2002, Curtea de Arges,Romania, August 19-23, 2002. Revised Papers., volume 2597 of LectureNotes in Computer Science, pages 90–106, Curtea de Arges, Romania,July 2003. Springer-Verlag, Berlin.

[165] Gemma Bel-Enguix, Matteo Cavaliere, Rodica Ceterchi, and CarlosMartın-Vide. Generating context-free languages with dynamic P sys-tems. In Pre-Proceedings of Second Workshop on Membrane Computing,Curtea de Arges, Romania, August 2002.

[166] Gemma Bel-Enguix and Radu Gramatovici. Active P automata and nat-ural language processing. In Artiom Alhazov, Carlos Martın-Vide, andGheorghe Paun, editors, Preproceedings of the Workshop on MembraneComputing, pages 61–71, Tarragona, July 17-22 2003.

[167] Gemma Bel-Enguix and Radu Gramatovici. Parsing with active P au-tomata. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, Grze-gorz Rozenberg, and Arto Salomaa, editors, Membrane Computing, In-ternational Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003,Revised Papers, volume 2933 of Lecture Notes in Computer Science,pages 31–42. Springer, July 2003.

[168] Gemma Bel-Enguix and M. Dolores Jimenez-Lopez. Dynamic meaningmembrane systems. Submitted.

[169] Gemma Bel-Enguix and M. Dolores Jimenez-Lopez. Membrane systemsfor conversation modeling. Submitted. Gemma Bel-Enguix, IntroducingParallelism in Conversation Modeling with Membrane Systems (submit-ted).

[170] Gemma Bel-Enguix and M. Dolores Jimenez-Lopez. Linguistic mem-brane systems and applications. Submitted, 2004. Gemma Bel-Enguixand M. Dolores Jimenez-Lopez, Linguistic membrane systems and appli-cations, in G. Ciobanu and Gh. Paun and M.J. Perez-Jimenez (eds.) Ap-plications of Membrane Computing, Berlin, Springer-Verlag (in press).

[171] Gemma Bel-Enguix and Marıa-Dolores Jimenez-Lopez. Explaining lan-guage change with membranes. In Pre-Proceedings of Workshop on

19

Page 20: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

Grammar Systems, Computer and Automation Research Institute (SZ-TAKI) of the Hungarian Academy of Sciences (MTA), pages 31–46, Bu-dapest, July 5-9 2004.

[172] L. Bernardinello, N. Bonzanni, M. Mascheroni, and L. Pomello. Model-ing symport/antiport P systems with a class of hierarchical petri nets.In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 123–138,Thessaloniki, Greece, 2007.

[173] F. Bernardini and R. Freund. Tissue p systems with communicationmodes. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Membrane Computing, International Workshop, WMC7,pages 132–144, Leiden, The Netherlands, 2006.

[174] F. Bernardini and M. Gheorghe. Cell communication in tissue p systems:universality results. Soft Computing, 9(9):640–649, September 2005.

[175] F. Bernardini, M. Gheorghe, and N. Krasnogor. Quorum sensing p sys-tems. Submitted, 2005.

[176] F. Bernardini, M. Gheorghe, and N. Krasnogor. Population P systemsand quorum sensing in bacteria. Theoretical Computer Science, 2006. ?

[177] F. Bernardini, M. Gheorghe, N. Krasnogor, and J.-L. Giavitto. On self-assembly in population p systems. UC05, accepted, 2005.

[178] F. Bernardini, M. Gheorghe, N. Krasnogor, R.C. Muniyandi, M.J PerezJimenez, and F.J. Romero Campero. On p systems as a modelling toolfor biological systems. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 193–213, 2005.

[179] F. Bernardini, M. Gheorghe, N. Krasnogor, and G. Terrazas. Mem-brane computing. current results and future problems, new computa-tional paradigms. In B. Lowe S. Barry Cooper and L. Torenvliet, ed-itors, First Conf. on Computability in Europe, CiE2005, Amsterdam,LNCS 3536, pages 49–53. Springer, 2005.

[180] F. Bernardini, M. Gheorghe, M. Margenstern, and S. Verlan. Networks ofcells and petri nets. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, and A. Nunez, editors, Proceedings of the Fifth BrainstormingWeek on Membrane Computing, pages 33–62, Sevilla (Spain), January29th - February 2 2007.

[181] F. Bernardini, M. Gheorghe, F.J. Romero-Campero, and N. Walkinshaw.A hybrid approach to modelling biological systems. In G. Eleftherakisand Gh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Com-puting, International Workshop - WMC8, pages 139–164, Thessaloniki,Greece, 2007.

20

Page 21: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[182] F. Bernardini, F. J. Romero-Campero, M. Gheorghe, M. J. Perez-Jimenez, M. Margenstern, S. Verlan, and N. Krasnogor. On p systemswith bounded parallelism. In in G. Ciobanu, Gh. Paun, Pre-Proc. ofFirst International Workshop on Theory and Application of P Systems,Timisoara, Romania, September 26-27, pages 31–36, 2005.

[183] Francesco Bernardini. Membrane Systems for Molecular Computing andBiological Modelling. PhD thesis, University of Sheffield, Sheffield, UK,2005.

[184] Francesco Bernardini and Marian Gheorghe. Language generating bymeans of P systems with active membranes. Technical Report 26, Rovirai Virgili University, 2003.

[185] Francesco Bernardini and Marian Gheorghe. Language generating bymeans of P systems with active membranes. In Matteo Cavaliere, CarlosMartın-Vide, and Gheorghe Paun, editors, Brainstorming Week on Mem-brane Computing, Tarragona, February 5-11 2003, pages 46–60, Tarrag-ona, February 5-11 2003.

[186] Francesco Bernardini and Marian Gheorghe. Molecular/Cellular X Ma-chines. In EMCC Workshop, Vienna, November 2003.

[187] Francesco Bernardini and Marian Gheorghe. On the power of minimalsymport/antiport. In Artiom Alhazov, Carlos Martın-Vide, and Gheo-rghe Paun, editors, Preproceedings of the Workshop on Membrane Com-puting, pages 72–83, Tarragona, July 17-22 2003.

[188] Francesco Bernardini and Marian Gheorghe. Cell communication in tis-sue P systems and cell division in population P Systems. TechnicalReport 01/2004, Dept. of Computer Sciences and Artificial Intelligence,Univ. of Sevilla, 2004.

[189] Francesco Bernardini and Marian Gheorghe. Cell communication in tis-sue P systems and cell division in population P Systems. In GheorghePaun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and FernandoSancho-Caparrini, editors, Second Brainstorming Week on MembraneComputing, Sevilla, Spain, February 2-7 2004, pages 74–91, Sevilla,Spain, February 2-7 2004.

[190] Francesco Bernardini and Marian Gheorghe. Computing at populationlevel in P systems. In Pre-proceedings of the Fifth Workshop on Mem-brane Computing (WMC5), Milano, Italy, June 2004, pages 151–153,Milano, Italy, June 2004.

[191] Francesco Bernardini and Marian Gheorghe. Languages generated by Psystems with active membranes. New Generation Computing, 22(4):311–329, August 2004.

21

Page 22: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[192] Francesco Bernardini and Marian Gheorghe. Population P systems. Jour-nal of Universal Computer Science, 10(5):509–539, May 2004.

[193] Francesco Bernardini, Marian Gheorghe, and Mike Holcombe. PX sys-tems = P systems + X machines. Natural Computing, 2(3):201–213,August 2003.

[194] Francesco Bernardini, Marian Gheorghe, and Mike Holcombe. EilenbergP systems with Symbol-Objects, volume 2950 of Lecture Notes in Com-puter Science, pages 49–60. Springer, 2004.

[195] Francesco Bernardini, Marian Gheorghe, Natalio Krasnogor, and Jean-Louis Giavitto. On self-assembly in population P systems. In Uncon-ventional Computation 4th International Conference, UC 2005, Sevilla,Spain, October 3-7, 2005. Proceedings, volume 3699 of Lecture Notes inComputer Science. Springer Berlin / Heidelberg, 2005.

[196] Francesco Bernardini, Marian Gheorghe, and Vincenzo Manca. On Psystems and almost periodicity. Fundamenta Informaticae, 2005. Toappear.

[197] Francesco Bernardini, Marian Gheorghe, Maurice Margenstern, andSergey Verlan. How to synchronize the activity of all components ofa P system? In Gyorgy Vaszil, editor, Proceedings of the InternationalWorkshop on Automata for Cellular and Molecular Computing, pages11–22, 2007.

[198] Francesco Bernardini, Marian Gheorghe, Maurice Margenstern, andSergey Verlan. How to synchronize the activity of all components ofa P system? International Journal of Foundations of Computer Science,19(5):1183–1198, 2008.

[199] Francesco Bernardini, Marion Gheorghe, N. Krasnogor, and GheorghePaun. Turing machines with cells on the tape. In Proceedings ofthe ESF Exploratory Workshop on Cellular Computing (Complexity As-pects), Sevilla (Spain), January 31st - February 2nd, pages 61–74, 2005.

[200] Francesco Bernardini and Vincenzo Manca. P systems with boundaryrules. In Pre-Proceedings of Second Workshop on Membrane Computing,Curtea de Arges, Romania, August 2002.

[201] Francesco Bernardini and Vincenzo Manca. Dynamical aspects of P sys-tems. BioSystems, 70(2):85–93, July 2003.

[202] Francesco Bernardini and Vincenzo Manca. P systems with boundaryrules. In Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Clau-dio Zandron, editors, Membrane Computing: International Workshop,WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002. Re-vised Papers., volume 2597 of Lecture Notes in Computer Science, pages107–118, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

22

Page 23: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[203] Francesco Bernardini and Andrei Paun. Universality of minimal sym-port/antiport: Five membranes suffice. In Carlos Martın-Vide, GiancarloMauri, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors,Membrane Computing, International Workshop, WMC 2003, Tarragona,Spain, July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notesin Computer Science, pages 43–54. Springer, July 2003.

[204] Daniel Bertinshaw. Algorithmic learning applications to P Systems. Sub-mitted, 2004.

[205] D. Besozzi, P. Cazzaniga, D. Pescini, and G. Mauri. Seasonal variance inp system models for metapopulations. In Pre-proceedings of InternationalConference on Bio-Inspired Computing - Theory and Applications, BIC-TA 2006, Membrane Computing Section, pages 27–36, Wuhan, China,September 2006.

[206] D. Besozzi, P. Cazzaniga, D. Pescini, and G. Mauri. Seasonal variancein p systems models for metapopulations. In Proc. Bio-Inspired Com-puting – Theory and Applications Conf., BIC-TA 2006, Wuhan, China,September 2006, Membrane Computing Section., 2006.

[207] D. Besozzi, E. Csuhaj-Varju, G. Mauri, and C. Zandron. On the powerand size of extended gemmating p systems. Soft Computing, 9(9):650–6,September 2005.

[208] D. Besozzi and G. Rozenberg. Extended p systems for the analysis of(trans)membrane proteins. In H.J. Hoogeboom, Gh. Paun, and G. Rozen-berg, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop, WMC7, pages 8–9, Leiden, The Netherlands, 2006.

[209] Daniela Besozzi. P Systems with gemmation. Master’s thesis, Universita’degli Studi di Milano, 2000.

[210] Daniela Besozzi. Computational and modelling power of P systems. PhDthesis, Universita’ degli Studi di Milano, Milano, Italy, 2004.

[211] Daniela Besozzi, Ioan I. Ardelean, and Giancarlo Mauri. The potentialof P systems for modelling the activity of mechanosensitive channels. InEMCC Workshop, Vienna, November 2003.

[212] Daniela Besozzi, Ioan I. Ardelean, and Giancarlo Mauri. The potentialof P systems for modelling the activity of mechanosensitive channels.In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors,Preproceedings of the Workshop on Membrane Computing, pages 84–102,Tarragona, July 17-22 2003.

[213] Daniela Besozzi, Nadia Busi, Giuditta Franco, Rudolf Freund, and Ghe-orghe Paun. Two universality results for (mem)brane systems. InMiguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez,

23

Page 24: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

and Francisco Jose Romero-Campero, editors, Fourth BrainstormingWeek on Membrane Computing, Sevilla, January 30 - February 3, 2006.Volume I, pages 49–62. Fenix Editora, 2006.

[214] Daniela Besozzi, Paolo Cazzaniga, Dario Pescini, and Giancarlo Mauri.Seasonal variance in P system models for metapopulations. Progress inNatural Science, 17(4):392–400, 2007.

[215] Daniela Besozzi, Paolo Cazzaniga, Dario Pescini, and Giancarlo Mauri.Modelling metapopulations with stochastic membrane systems. Biosys-tems, 91(3):499–514, 2008.

[216] Daniela Besozzi and Gabriel Ciobanu. A P systems description of thesodium-potassium pump. In Pre-proceedings of the Fifth Workshop onMembrane Computing (WMC5), Milano, Italy, June 2004, pages 154–160, Milano, Italy, June 2004.

[217] Daniela Besozzi, Erzsebet Csuhaj-Varju, Giancarlo Mauri, and ClaudioZandron. Size and power of extended gemmating p pystems. In GheorghePaun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and FernandoSancho-Caparrini, editors, Second Brainstorming Week on MembraneComputing, Sevilla, Spain, February 2-7 2004, pages 92–101, Sevilla,Spain, February 2-7 2004.

[218] Daniela Besozzi, Erzsebet Csuhaj-Varju, Giancarlo Mauri, and ClaudioZandron. Size and power of extended gemmating P systems. TechnicalReport 01/2004, Dept. of Computer Sciences and Artificial Intelligence,Univ. of Sevilla, 2004.

[219] Daniela Besozzi, Claudio Ferretti, Giancarlo Mauri, and Claudio Zan-dron. P systems with deadlock. BioSystems, 70(2):95–105, July 2003.

[220] Daniela Besozzi, Claudio Ferretti, Giancarlo Mauri, and Claudio Zan-dron. Parallel rewriting P systems with deadlock. In Masami Hagiyaand Azuma Ohuchi, editors, DNA Computing: 8th International Work-shop on DNA-Based Computers, DNA8 Sapporo, Japan, June 10-13,2002. Revised Papers, volume 2568 of Lecture Notes In Computer Sci-ence, pages 302–314. Springer-Verlag Heidelberg, 2003.

[221] Daniela Besozzi, Giancarlo Mauri, Gheorghe Paun, and Claudio Zan-dron. Gemmating P systems: collapsing hierarchies. Theoretical Com-puter Science, 296(2):253–267, March 2003.

[222] Daniela Besozzi, Giancarlo Mauri, Dario Pescini, and Claudio Zandron.Membrane systems in systems biology. In 9th International Workshopon Discrete Event Systems, pages 275–280, 2008.

[223] Daniela Besozzi, Giancarlo Mauri, Gyorgy Vaszil, and Claudio Zandron.Collapsing hierarchies of parallel rewriting P systems without target con-flicts. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, Grzegorz

24

Page 25: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

Rozenberg, and Arto Salomaa, editors, Membrane Computing, Interna-tional Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Re-vised Papers, volume 2933 of Lecture Notes in Computer Science, pages55–69. Springer, July 2003.

[224] Daniela Besozzi, Giancarlo Mauri, Gyorgy Vaszil, and Claudio Zandron.Collapsing hierarchies of parallel rewriting P systems without target con-flicts. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, ed-itors, Preproceedings of the Workshop on Membrane Computing, pages103–116, Tarragona, July 17-22 2003.

[225] Daniela Besozzi, Giancarlo Mauri, and Claudio Zandron. Parallelrewritint P systems without target conflicts. In Pre-Proceedings of Sec-ond Workshop on Membrane Computing, Curtea de Arges, Romania,August 2002.

[226] Daniela Besozzi, Giancarlo Mauri, and Claudio Zandron. Hierarchiesof parallel rewriting P systems. Technical Report 26, Rovira i VirgiliUniversity, 2003.

[227] Daniela Besozzi, Giancarlo Mauri, and Claudio Zandron. Hierarchiesof parallel rewriting P systems. In Matteo Cavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors, Brainstorming Week on MembraneComputing, Tarragona, February 5-11 2003, pages 61–74, Tarragona,February 5-11 2003.

[228] Daniela Besozzi, Giancarlo Mauri, and Claudio Zandron. Parallel rewrit-ing P systems without target conflicts. In Gheorghe Paun, Grze-gorz Rozenberg, Arto Salomaa, and Claudio Zandron, editors, Mem-brane Computing: International Workshop, WMC-CdeA 2002, Curteade Arges, Romania, August 19-23, 2002. Revised Papers., volume 2597of Lecture Notes in Computer Science, pages 119–133, Curtea de Arges,Romania, July 2003. Springer-Verlag, Berlin.

[229] Daniela Besozzi, Giancarlo Mauri, and Claudio Zandron. Hierarchiesof parallel rewriting P systems. a survey. New Generation Computing,22(4):331–347, August 2004.

[230] Daniela Besozzi, Giancarlo Mauri, and Claudio Zandron. A survey oflatest results on P systems with deadlock, pages 17–46. Kronos Editorial,Sevilla, 2004. To appear.

[231] Daniela Besozzi and Claudio Zandron. Dynamical probabilistic P Sys-tems. Submitted, 2004. DNA10 poster?

[232] Daniela Besozzi, Claudio Zandron, Giancarlo Mauri, and N. Sabadini.P systems with gemmation of mobile membranes. In Antonio Restivo,

25

Page 26: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

Simona Ronchi-Della-Rocca, and Luca Roversi, editors, Theoretical Com-puter Science. 7th Italian Conference, ICTCS 2001, Torino, Italy, Octo-ber 4-6, 2001. Proceedings., volume 2202 of Lecture Notes in ComputerScience, pages 136–153, Turin, October 2001. Springer-Verlag.

[233] Markus Beyreder and Rudolf Freund. Membrane systems using noncoop-erative rules with unconditional halting. In David Wolfe Corne, PierluigiFrisco, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, edi-tors, Membrane Computing: 9th International Workshop, volume 5391of Lecture Notes in Computer Science, pages 129–136, 2009.

[234] L. Bianco. Membrane Models of Biological Systems. PhD thesis, Univer-sita’ degli Studi di Verona, Italy, Verona, Italy, 2007.

[235] L. Bianco. Psim: A computational platform for metabolic P systems.In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 1–20,Thessaloniki, Greece, 2007.

[236] L. Bianco and F. Fontana. Towards an hybrid metablic algorithm. InH.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedingsof Membrane Computing, International Workshop, WMC7, pages 145–158, Leiden, The Netherlands, 2006.

[237] L. Bianco, F. Fontana, and V. Manca. P systems and the modeling of bio-chemical oscillations. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 214–225, 2005.

[238] L. Bianco, F. Fontana, and V. Manca. Reaction-driven membrane sys-tems. In ICNC’05, Changsha, China, August 2005.

[239] L. Bianco, F. Fontana, and V. Manca. Computation of biochemicaldynamics using mp systems. Computational Methods in Systems Biology,International Conference (poster), 2006.

[240] L. Bianco and V. Manca. Encoding-decoding classes of p systems for themethabolic algorithm. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 226–234, 2005.

[241] L. Bianco, V. Manca, and S. Zorzan. Symbolic representations of biolog-ical oscillations. In in G. Ciobanu, Gh. Paun, Pre-Proc. of First Inter-national Workshop on Theory and Application of P Systems, Timisoara,Romania, September 26-27, pages 37–44, 2005.

[242] L. Bianco and Vincenzo Manca. Metabolic algorithms and signal trans-duction dynamical networks. In First brainstorming Workshop on Un-certainty in Membrane Computing, Palma de Mallorca, Spain, November2004, 2004.

26

Page 27: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[243] L. Bianco, D. Pescini, P. Siepmann, N. Krasnogor, F.J. Romero-Campero, and M. Gheorghe. Towards a p systems pseudomonas quorumsensing model. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, edi-tors, Pre-proceedings of Membrane Computing, International Workshop,WMC7, pages 159–176, Leiden, The Netherlands, 2006.

[244] Luca Bianco, Federico Fontana, Giuditta Franco, and Vincenzo Manca.P Systems in bio systems. Submitted, 2004. in G. Paun, P systems:Applications and Perspectives, to appear, 2004.

[245] Luca Bianco, Federico Fontana, and Vincenzo Manca. Metabolic al-gorithm with time-varying reaction maps. In Proceedings of the ThirdBrainstorming Week on Membrane Computing, Sevilla (Spain), January31st - February 4th, pages 43–62, 2005.

[246] Luca Bianco, Federico Fontana, and Vincenzo Manca. P systems with re-action maps. International Journal of Foundations of Computer Science,17(1):27–48, February 2006.

[247] Luca Bianco and Vincenzo Manca. Symbolic generation and representa-tion of complex oscillations. International Journal of Computer Mathe-matics, 83(7):549–568, 2006.

[248] A. Binder, R. Freund, G. Lojka, and M. Oswald. Applications of mem-brane systems in distributed systems. In Proc. Bio-Inspired Computing –Theory and Applications Conf., BIC-TA 2006, Wuhan, China, Septem-ber 2006, Membrane Computing Section., 2006.

[249] A. Binder, R. Freund, G. Lojka, and M. Oswald. Applications of mem-brane systems in distributed systems. In Pre-proceedings of InternationalConference on Bio-Inspired Computing - Theory and Applications, BIC-TA 2006, Membrane Computing Section, pages 37–50, Wuhan, China,September 2006.

[250] A. Binder, R. Freund, M. Oswald, and L. Vock. Extended spiking neuralp systems with excitatory and inhibitory astrocytes. In M.A. Gutierrez-Naranjo, Gh. Paaun, A. Romero-Jimenez, and A. Riscos-Nunez, editors,Proceedings of the Fifth Brainstorming Week on Membrane Computing,pages 63–72, Sevilla (Spain), January 29th - February 2 2007.

[251] Aneta Binder, Rudolf Freund, Georg Lojka, and Marion Oswald. Im-plementation of catalytic P Systems. Submitted, 2004. CIAA 2004,Ninth Intern. Conf. on Implementation and Application of Automata,Kingston, Canada, 2004, 24–33.

[252] Aneta Binder, Rudolf Freund, Georg Lojka, and Marion Oswald. Imple-mentation of catalytic P systems. In Ninth International Conferenceon Implementation and Application of Automata Queen’s University,Kingston, Ontario, Canada, July 22-24, 2004, pages 24–33, Ontario,Canada, July 22-24 2004.

27

Page 28: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[253] Aneta Binder, Rudolf Freund, Georg Lojka, and Marion Oswald. Appli-cations of membrane systems in distributed systems. Progress in NaturalScience, 17(4):401–409, 2007.

[254] Aneta Binder, Rudolf Freund, and Marion Oswald. Extended spikingneural P systems with astrocytes – Variants for modelling the brain.In Masanori Sugisaka and Hiroshi Tanaka, editors, 13th InternationalSymposium on Artificial Life and Robotics, pages 520–524, 2008.

[255] Cosmin Bonchis, Cornel Izbasa, and Gabriel Ciobanu. Information the-ory over multisets. Computing and Informatics, 27(3+):441–451, 2008.

[256] C. Bonchis, G. Ciobanu, C. Isbasha, and D. Petcu. A web-based p systemsimulator and its parallelization. UC05, accepted, 2005.

[257] C. Bonchis, C. Isbasa, and G. Ciobanu. Compositional asynchronousmembrane systems. In Pre-proceedings of International Conference onBio-Inspired Computing - Theory and Applications, BIC-TA 2006, Mem-brane Computing Section, pages 51–59, Wuhan, China, September 2006.

[258] C. Bonchis, C. Isbasa, and G. Ciobanu. Compositional asynchronousmembrane systems. In Proc. Bio-Inspired Computing – Theory and Ap-plications Conf., BIC-TA 2006, Wuhan, China, September 2006, Mem-brane Computing Section., 2006.

[259] C. Bonchis, C. Izbasa, and G. Ciobanu. Information theory over mul-tisets. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, andA. Riscos-Nunez, editors, Proceedings of the Fifth Brainstorming Weekon Membrane Computing, pages 73–86, Sevilla (Spain), January 29th -February 2 2007.

[260] C. Bonchis, C. Izbasa, and G. Ciobanu. Information theory over multi-sets. In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedingsof Membrane Computing, International Workshop - WMC8, pages 165–172, Thessaloniki, Greece, 2007.

[261] Cosmin Bonchis, Gabriel Ciobanu, Cornel Izbasa, and Dana Petcu. Aweb-based P systems simulator and its parallelization. In UnconventionalComputation 4th International Conference, UC 2005, Sevilla, Spain, Oc-tober 3-7, 2005. Proceedings, volume 3699 of Lecture Notes in ComputerScience. Springer Berlin / Heidelberg, 2005.

[262] Cosmin Bonchis, Cornel Isbasa, Dana Petcu, and Gabriel Ciobanu.WebPS: A web-based P system simulator with query facilities. In Pro-ceedings of the Third Brainstorming Week on Membrane Computing,Sevilla (Spain), January 31st - February 4th, pages 63–72, 2005.

[263] Cosmin Bonchis, Cornel Izbasa, and Gabriel Ciobanu. Composi-tional asynchronous membrane systems. Progress in Natural Science,17(4):411–416, 2007.

28

Page 29: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[264] R. Borrego-Ropero, D. Diaz-Pernil, and J.A. Nepomuceno. Visualtissue:A friendly tool to study tissue p systems solutions for graph problems. InM.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, and A. Nunez,editors, Proceedings of the Fifth Brainstorming Week on Membrane Com-puting, pages 87–96, Sevilla (Spain), January 29th - February 2 2007.

[265] Rafael Borrego-Ropero, Daniel Dıaz-Pernil, and Mario J. Perez-Jimenez.Tissue simulator: A graphical tool for tissue P systems. In GyorgyVaszil, editor, Proceedings of the International Workshop on Automatafor Cellular and Molecular Computing, pages 23–34, 2007.

[266] Paolo Bottoni, Anna Labella, Carlos Martın-Vide, and Gheorghe Paun.Rewriting P systems with conditional communication. In W. Brauer,H. Ehrig, J. Karhumaki, and Arto Salomaa, editors, Formal and NaturalComputing: Essays Dedicated to Grzegorz Rozenberg, volume 2300 of Lec-ture Notes in Computer Science, pages 325–353, Berlin, 2002. Springer-Verlag.

[267] Paolo Bottoni, Carlos Martın-Vide, Gheorghe Paun, and GrzegorzRozenberg. Membrane systems with promoters/inhibitors. Submitted,2000.

[268] Paolo Bottoni, Carlos Martın-Vide, Gheorghe Paun, and GrzegorzRozenberg. Membrane systems with promoters/inhibitors. Acta Infor-matica, 38(10):695–720, September 2002.

[269] Gines Bravo, Luis Fernandez, and M. A. Pena. Hierarchical master-slave architecture for membrane systems implementation. In MasanoriSugisaka and Hiroshi Tanaka, editors, 13th International Symposium onArtificial Life and Robotics, pages 485–490, 2008.

[270] R. Brijder, M. Cavaliere, A. Riscos-Nunez, G. Rozenberg, andD. Sburlan. Membrane systems with external control. In H.J. Hooge-boom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Mem-brane Computing, International Workshop, WMC7, pages 177–195, Lei-den, The Netherlands, 2006.

[271] R. Brijder, G. Rozenberg, M. Cavaliere, A. Riscos-Nunez, andD. Sburlan. Communication membrane systems with active symports.Submitted, 2005.

[272] Robert Brijder. Models of Natural Computation: Gene Assembly andMembrane Systems. PhD thesis, Leiden University, Netherlands, 2008.

[273] Robert Brijder, Matteo Cavaliere, Agustın Riscos-Nunez, GrzegorzRozenberg, and Sburlan Dragos. Membrane systems with proteins em-bedded in membranes. Theoretical Computer Science, 404(1-2):26–39,2008.

29

Page 30: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[274] N. Busi. On the computational power of the mate/bud/drip brane cal-culus: Interleaving vs. maximal parallelism. In Pre-Proc. of the sixthWorkshop on Membrane Computing, WMC6, Vienna, Austria, pages235–252, 2005.

[275] N. Busi. Decidability of divergence for catalytic p systems. Submitted,2006.

[276] N. Busi. Causality in membrane systems. In G. Eleftherakis andGh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Computing,International Workshop - WMC8, pages 173–184, Thessaloniki, Greece,2007.

[277] N. Busi. Towards a causal semantics for brane calculi. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, and A. Nunez, editors, Proceed-ings of the Fifth Brainstorming Week on Membrane Computing, pages97–112, Sevilla (Spain), January 29th - February 2 2007.

[278] N. Busi and M.A. Gutierrez-Naranjo. A case study in (mem)brane com-putation: Generating {n2 | n ≥ 1}. In H.J. Hoogeboom, Gh. Paun, andG. Rozenberg, editors, Pre-proceedings of Membrane Computing, Inter-national Workshop, WMC7, pages 196–212, Leiden, The Netherlands,2006.

[279] N. Busi and C. Zandron. Computing with genetic gates, proteins andmembranes. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, edi-tors, Pre-proceedings of Membrane Computing, International Workshop,WMC7, pages 213–228, Leiden, The Netherlands, 2006.

[280] N. Busi and C. Zandron. Modeling and analysis of biological processes bymem(brane) calculi and systems. In Proc. of the 2006 Winter SimulationConference, Monterey, CA, Usa, 2006.

[281] Nadia Busi. Decidability of divergence for catalytic P systems. InMiguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez,and Francisco Jose Romero-Campero, editors, Fourth BrainstormingWeek on Membrane Computing, Sevilla, January 30 - February 3, 2006.Volume I, pages 63–80. Fenix Editora, 2006.

[282] Nadia Busi. Using well-structured transition systems to decide divergencefor catalytic P systems. Theoretical Computer Science, 372(2-3):125–135,2007.

[283] Nadia Busi and Miguel-Aangel Gutierrez-Naranjo. A case study in(mem)brane computation: Generating {n2 | n ≥ 1}. In Miguel AngelGutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Fran-cisco Jose Romero-Campero, editors, Fourth Brainstorming Week onMembrane Computing, Sevilla, January 30 - February 3, 2006. VolumeI, pages 81–98. Fenix Editora, 2006.

30

Page 31: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[284] Mara Buzzi. Calcolo con membrane. P Sistemi probabilistici. Master’sthesis, Univ. of Como, 2003.

[285] Cristian Calude, Michael J. Dinneen, and Gheorghe Paun, editors. Pre-Proceedings of Workshop on Multiset Processing, Curtea de Arges, Ro-mania, August 2000, August 2000.

[286] Cristian Calude, Michael J. Dinneen, and Gheorghe Paun, editors. Tech-nical Report 140, CDMTCS, Univ. Auckland, New Zealand, 2000, 2000.320 pages.

[287] Cristian Calude, Gheorghe Paun, Grzegorz Rozenberg, and Arto Sa-lomaa, editors. Multiset Processing. Mathematical, Computer Science,Molecular Computing Points of View, volume 2235 of Lecture Notes inComputer Science, Berlin, 2001. Springer-Verlag. 360 + viii pages.

[288] Cristian S. Calude and Gheorghe Paun. Computing with cells and atomsin a nutshell. Complexity, 6(1):38–48, 2000.

[289] Cristian S. Calude and Gheorghe Paun. Computing with Membranes,chapter 3. Taylor and Francis, London, 2000.

[290] Cristian S. Calude and Gheorghe Paun. Bio-steps beyond Turing.BioSystems, 77(1-3):175–194, November 2004.

[291] Cristian S. Calude and Gheorghe Paun. Computing with cells and atoms:After five years. Technical Report R 246, Univ. of Auckland, 2004.CDMTCS Tech. Rep. R 246.

[292] Cristian S. Calude, Gheorghe Paun, and Monica Tataram. A glimpseinto natural computing. Technical Report 117, CDMTCS University ofAuckland, 2000.

[293] Cristian S. Calude, Gheorghe Paun, and Monica Tataram. A glimpseinto natural computing. Journal of Multi-Valuate Logic, 7:1–28, 2001.

[294] M. Camara and Quorum Sensing. A cell-cell signaling mechanism used tocoordinate behavioural changes in bacterial populations. In H.J. Hooge-boom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Mem-brane Computing, International Workshop, WMC7, pages 10–14, Leiden,The Netherlands, 2006.

[295] L. Cardelli. Abstract machines of systems biology (extended abstract). InProceedings of the Third Brainstorming Week on Membrane Computing,Sevilla (Spain), January 31st - February 4th, pages 73–86, 2005.

[296] L. Cardelli and Gheorghe Paun. An universality result for a (mem)branecalculus based on mate/drip operations. In Proceedings of the ESF Ex-ploratory Workshop on Cellular Computing (Complexity Aspects), Sevilla(Spain), January 31st - February 2nd, pages 75–94, 2005.

31

Page 32: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[297] Luca Cardelli and Gheorghe Paun. An universality result for a(mem)brane calculus based on mate/drip operations. International Jour-nal of Foundations of Computer Science, 17(1):49–68, February 2006.

[298] M. Cardona, M. Angels Colomer, M.J. Perez-Jimenez, and A. Zaragoza.Handling markov chains with membrane computing. Submitted, 2005.

[299] M. Cardona, M.A. Colomer, M.J. Perez-Jimenez, and A. Zaragoza. Clas-sifying states of a finite markov chain with membrane computing. In H.J.Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings ofMembrane Computing, International Workshop, WMC7, pages 229–241,Leiden, The Netherlands, 2006.

[300] M. Cardona, M.A. Colomer, M.J. Perez-Jimenez, and A. Zaragoza. Hi-erarchical clustering with membrane computing. In G. Eleftherakis andGh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Computing,International Workshop - WMC8, pages 185–204, Thessaloniki, Greece,2007.

[301] Monica Cardona, M.Angels Colomer, Mario-Jesus Perez-Jimenez, andAlba Zaragoza. Handling markov chains with membrane computing.In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors, Fourth Brain-storming Week on Membrane Computing, Sevilla, January 30 - February3, 2006. Volume I, pages 99–112. Fenix Editora, 2006.

[302] J. Casasnovas, M. Moya, J. Miro, and F. Rossello. A fuzzy approach tomembrane computing with approximate copies. In First brainstormingWorkshop on Uncertainty in Membrane Computing, Palma de Mallorca,Spain, November 2004, 2004.

[303] J. Casasnovas and F. Rossello. Counting the contents of fuzzy mem-branes... and related problem. In First brainstorming Workshop on Un-certainty in Membrane Computing, Palma de Mallorca, Spain, November2004, 2004.

[304] Giovanni Casiraghi, Claudio Ferretti, A. Gallini, and Giancarlo Mauri.A membrane computing system mapped on an asynchronous distributedcomputational environment. In Pre-Proc. of the sixth Workshop on Mem-brane Computing, WMC6, Vienna, Austria, pages 253–260, 2005.

[305] Juan Castellanos, Gheorghe Paun, and Alfonso Rodrıguez-Paton. P sys-tems with worm-objects. Technical Report 123, University of Auckland,2000. www.cs.auckland.ac.nz/CDMTCS.

[306] Juan Castellanos, Gheorghe Paun, and Alfonso Rodrıguez-Paton. P sys-tems with worm-objects. In Proceedings of the Seventh InternationalSymposium on String Processing Information Retrieval (SPIRE’00),pages 64–74, A Coruna, Spain, September 2000. IEEE Computer So-ciety.

32

Page 33: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[307] Alberto Castellini, Giuditta Franco, and Vincenzo Manca. Hybrid func-tional Petri nets as MP systems. Natural Computing, to appear.

[308] Alberto Castellini and Vincenzo Manca. MetaPlab: A computationalframework for metabolic P systems. In David Wolfe Corne, PierluigiFrisco, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, edi-tors, Membrane Computing: 9th International Workshop, volume 5391of Lecture Notes in Computer Science, pages 157–168, 2009.

[309] M. Cavaliere, O. Egecioglu, O.H. Ibarra, S. Woodworth, M. Ionescu,and Gh. Paun. Asynchronous spiking neural P systems technical report9/2007, microsoft research - university of trento, centre for computa-tional and systems biology. Technical Report 9-2007, Microsoft ResearchUniversity of Trento, 2007.

[310] M. Cavaliere and R. Mardare. Playing with partial knowledge in mem-brane systems: A logical approach. In H.J. Hoogeboom, Gh. Paun, andG. Rozenberg, editors, Pre-proceedings of Membrane Computing, Inter-national Workshop, WMC7, pages 242–260, Leiden, The Netherlands,2006.

[311] M. Cavaliere, R. Mardare, and S. Sedwards. Colonies of synchronizingagents technical report 11-2007, microsoft research university of trento,centre for computational and systems biology. Technical Report 11-2007,Microsoft Research University of Trento, 2007.

[312] M. Cavaliere and I. Mura. Experiments on the reliability of stochasticspiking neural p systems. Natural Computing, to appear, 2008.

[313] M. Cavaliere, A. Riscos-Nunez, R. Brijder, and G. Rozenberg. Membranesystems with marked membranes. Submitted, 2005.

[314] M. Cavaliere, A. Riscos-Nunez, R. Brijder, and G. Rozenberg. Membranesystems with marked membranes. In N. Busi and C. Zandron, editors,Proceedings MeCBIC 2006, Venice, 2006.

[315] M. Cavaliere, A. Riscos-Nunez, G. Rozenberg, and D. Sburlan. Mem-brane systems with external control. Submitted, 2005.

[316] M. Cavaliere and S. Sedwards. Modelling cellular processes using mem-brane systems with peripheral and integral proteins. In Fourth In-ternational Conference on Computational Methods in Systems Biology,CMSB2006, Lecture Notes In Bioinformatics. Springer-Verlag.

[317] M. Cavaliere and S. Sedwards. Membrane systems with peripheral pro-teins: transport and evolution. In N. Busi and C. Zandron, editors,Proceedings MeCBIC 2006, Venice, 2006.

33

Page 34: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[318] Mateo Cavaliere. Evolution, communication, observation: From biologyto membrane computing and back. PhD thesis, University of Sevilla,Sevilla, Spain, 2006.

[319] Matteo Cavaliere. Evolution, communication and observation. from biol-ogy to membrane systems and back. Submitted. RNGC Report 03/2004,Sevilla University.

[320] Matteo Cavaliere. Evolution-communication P systems. In GheorghePaun, Grzegorz Rozenberg, Arto Salomaa, and Claudio Zandron, edi-tors, Membrane Computing: International Workshop, WMC-CdeA 2002,Curtea de Arges, Romania, August 19-23, 2002. Revised Papers., volume2597 of Lecture Notes in Computer Science, pages 134–145, Curtea deArges, Romania, July 2003. Springer-Verlag, Berlin.

[321] Matteo Cavaliere. Evolution, communication and observation. from bi-ology to membrane systems and back. Technical Report 03/2004, SevillaUniversity, 2004. RNGC Report 03/2004.

[322] Matteo Cavaliere. Modelling biological processes in P systems: Han-dling imprecision and constructing new models. In First brainstormingWorkshop on Uncertainty in Membrane Computing, Palma de Mallorca,Spain, November 2004, 2004.

[323] Matteo Cavaliere. Towards asynchronous P systems. In Pre-proceedingsof the Fifth Workshop on Membrane Computing (WMC5), Milano, Italy,June 2004, pages 161–173, Milano, Italy, June 2004.

[324] Matteo Cavaliere and Ioan I. Ardelean. Modelling respiration in bacteriaand respiration/photosynthesis interaction in cyanobacteria by using aP System simulator. Submitted, 2004.

[325] Matteo Cavaliere and Vincenzo Deufemia. On time-free P Systems. Sub-mitted, 2004.

[326] Matteo Cavaliere and Vincenzo Deufemia. Further results on time-freeP systems. In Proceedings of the ESF Exploratory Workshop on Cel-lular Computing (Complexity Aspects), Sevilla (Spain), January 31st -February 2nd, pages 95–116, 2005.

[327] Matteo Cavaliere and Vincenzo Deufemia. Specifying dynamic softwarearchitectures by using membrane systems. In Proceedings of the ThirdBrainstorming Week on Membrane Computing, Sevilla (Spain), January31st - February 4th, pages 87–106, 2005.

[328] Matteo Cavaliere and Vincenzo Deufemia. Further results on time-freeP systems. International Journal of Foundations of Computer Science,17(1):69–89, February 2006.

34

Page 35: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[329] Matteo Cavaliere, Rudolf Freund, A. Leitsch, and Gheorghe Paun.Event-related outputs of computations in P systems. In Proceedings of theThird Brainstorming Week on Membrane Computing, Sevilla (Spain),January 31st - February 4th, pages 107–122, 2005.

[330] Matteo Cavaliere, Rudolf Freund, Marion Oswald, and Dragos Sburlan.Multiset random context grammars, checkers, and transducers. Theoret-ical Computer Science, 372(2-3):136–151, 2007.

[331] Matteo Cavaliere, Rudolf Freund, Marion Oswald, and Dragos Sburlan.Multiset random context grammars, checkers, and transducers. InMiguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez,and Francisco Jose Romero-Campero, editors, Fourth BrainstormingWeek on Membrane Computing, Sevilla, January 30 - February 3, 2006.Volume I, pages 113–132. Fenix Editora, 2006.

[332] Matteo Cavaliere and Daniela Genova. P systems with symport/antiportof rules. Technical Report 01/2004, Dept. of Computer Sciences andArtificial Intelligence, Univ. of Sevilla, 2004.

[333] Matteo Cavaliere and Daniela Genova. P systems with symport/antiportof rules. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second BrainstormingWeek on Membrane Computing, Sevilla, Spain, February 2-7 2004, pages102–116, Sevilla, Spain, February 2-7 2004.

[334] Matteo Cavaliere and Daniela Genova. P systems with symport/antiportof rules. Journal of Universal Computer Science, 10(5):540–558, May2004.

[335] Matteo Cavaliere, Mihai Ionescu, and Tseren-Onolt Ishdorj.Inhibiting/de-inhibiting rules in P systems. In Pre-proceedings ofthe Fifth Workshop on Membrane Computing (WMC5), Milano, Italy,June 2004, pages 174–183, Milano, Italy, June 2004.

[336] Matteo Cavaliere, Mihai Ionescu, and Tseren-Onolt Ishdorj.Inhibiting/de-inhibiting P systems with active membranes. InProceedings of the ESF Exploratory Workshop on Cellular Computing(Complexity Aspects), Sevilla (Spain), January 31st - February 2nd,pages 117–130, 2005.

[337] Matteo Cavaliere and Natasa Jonoska. Forbidding and enforcing in mem-brane computing. Natural Computing, 2(3):215–228, August 2003.

[338] Matteo Cavaliere and Natasha Jonoska. Forbidding and enforcing inmembrane computing. Technical Report 26, Rovira i Virgili University,2003.

35

Page 36: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[339] Matteo Cavaliere and Natasha Jonoska. Forbidding and enforcing inmembrane computing. In Matteo Cavaliere, Carlos Martın-Vide, andGheorghe Paun, editors, Brainstorming Week on Membrane Computing,Tarragona, February 5-11 2003, pages 75–84, Tarragona, February 5-112003.

[340] Matteo Cavaliere and Peter Leupold. Evolution and observation - a newway to look at membrane systems. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedings of the Workshop onMembrane Computing, pages 117–132, Tarragona, July 17-22 2003.

[341] Matteo Cavaliere and Peter Leupold. Evolution and observation: A newway to look at membrane systems. In Carlos Martın-Vide, GiancarloMauri, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors,Membrane Computing, International Workshop, WMC 2003, Tarragona,Spain, July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notesin Computer Science, pages 70–87. Springer, July 2003.

[342] Matteo Cavaliere and Peter Leupold. Evolution and observationa non-standard way to generate formal languages. Theoretical Computer Sci-ence, 321(2-3):233–248, August 2004.

[343] Matteo Cavaliere, Radu Mardare, and Sean Sedwards. A multiset-basedmodel of synchronizing agents: Computability and robustness. Theoret-ical Computer Science, 391(3):216–238, 2008.

[344] Matteo Cavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors.Brainstorming Week on Membrane Computing, Tarragona, February 5-11 2003, 2003.

[345] Matteo Cavaliere and Ivan Mura. Experiments on the reliability ofstochastic spiking neural P systems. Natural Computing, 7(4):453–470,2008.

[346] Matteo Cavaliere and Dragos Sburlan. Time-independent P systems.In Giancarlo Mauri, Gheorghe Paun, Mario J. Perez-Jimenez, GrzegorzRozenberg, and Arto Salomaa, editors, Membrane Computing. Interna-tional Workshop WMC5, Milano, Italy, 2004 (TO APPEAR).

[347] Matteo Cavaliere and S. Sburlan. Time and synchronization in membranesystems. Fundamenta Informaticae, 2005. To appear.

[348] Matteo Cavaliere and S. Sedwards. Modelling cellular processes usingmembrane systems with peripheral and integral proteins. Technical Re-port 07/2006, Microsoft Research - University of Trento, Centre for Com-putational and Systems Biology, Trento, Italy. Technical Report 7/2006,Microsoft Research - University of Trento, Centre for Computational andSystems Biology.

36

Page 37: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[349] Matteo Cavaliere and S. Sedwards. Decision problems in membrane sys-tems with peripheral proteins, transport and evolution. Technical Report12/2006, Microsoft Research - University of Trento, Centre for Compu-tational and Systems Biology, Trento, Italy, 2006. Microsoft Research -University of Trento, Centre for Computational and Systems Biology.

[350] Matteo Cavaliere and S. Sedwards. Membrane systems with peripheralproteins: transport and evolution. Technical Report 04/2006, MicrosoftResearch - University of Trento, Centre for Computational and SystemsBiology, Trento, Italy, 2006. Microsoft Research - University of Trento,Centre for Computational and Systems Biology.

[351] Matteo Cavaliere and Claudio Zandron. Time-driven computations in Psystems. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, AgustınRiscos-Nunez, and Francisco Jose Romero-Campero, editors, FourthBrainstorming Week on Membrane Computing, Sevilla, January 30 -February 3, 2006. Volume I, pages 133–144. Fenix Editora, 2006.

[352] P. Cazzaniga, A. Leporati, G. Mauri, and C. Zandron. P systems withmemory. In Pre-Proc. of the sixth Workshop on Membrane Computing,WMC6, Vienna, Austria, pages 261–281, 2005.

[353] P. Cazzaniga, D. Pescini, D. Besozzi, and G. Mauri. Tau leaping stochas-tic simulation method in p systems. In H.J. Hoogeboom, Gh. Paun, andG. Rozenberg, editors, Pre-proceedings of Membrane Computing, Inter-national Workshop, WMC7, pages 261–273, Leiden, The Netherlands,2006.

[354] Paolo Cazzaniga, Dario Pescini, Daniela Besozzi, Giancarlo Mauri, So-nia Colombo, and Enzo Martegani. Modeling and stochastic simulationof the ras/camp/pka pathway in the yeast saccharomyces cerevisiae ev-idences a key regulatory function for intracellular guanine nucleotidespools. Journal of Biotechnology, 133(3):377–385, 2008.

[355] Paolo Cazzaniga, Dario Pescini, Francisco-Jose Romero-Campero,Daniela Besozzi, and Giancarlo Mauri. Stochastic approaches in Psystems for simulating biological systems. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Francisco JoseRomero-Campero, editors, Fourth Brainstorming Week on MembraneComputing, Sevilla, January 30 - February 3, 2006. Volume I, pages145–164. Fenix Editora, 2006.

[356] R. Ceterchi, M.J. Perez-Jimenez, and A.I. Tomescu. Simulating thebitonic sort on a 2D-mesh with P systems. In G. Eleftherakis andGh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Computing,International Workshop - WMC8, pages 205–226, Thessaloniki, Greece,2007.

37

Page 38: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[357] Rodica Ceterchi. Rewriting in P systems: An algebreic approach. InMiguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez,and Francisco Jose Romero-Campero, editors, Fourth BrainstormingWeek on Membrane Computing, Sevilla, January 30 - February 3, 2006.Volume I, pages 165–168. Fenix Editora, 2006.

[358] Rodica Ceterchi, Radu Gramatovici, and Natasa Jonoska. Tiling rect-angular pictures with P systems. In Carlos Martın-Vide, GiancarloMauri, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors,Membrane Computing, International Workshop, WMC 2003, Tarragona,Spain, July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notesin Computer Science, pages 88–103. Springer, July 2003.

[359] Rodica Ceterchi, Radu Gramatovici, and Natasha Jonoska. P systems fortiling rectangular pictures. In Artiom Alhazov, Carlos Martın-Vide, andGheorghe Paun, editors, Preproceedings of the Workshop on MembraneComputing, pages 133–144, Tarragona, July 17-22 2003.

[360] Rodica Ceterchi, Radu Gramatovici, Natasha Jonoska, and K.G. Subra-manian. Generating picture languages with P systems. Technical Re-port 26, Rovira i Virgili University, 2003.

[361] Rodica Ceterchi, Radu Gramatovici, Natasha Jonoska, and K.G. Subra-manian. Generating picture languages with P systems. In Matteo Cav-aliere, Carlos Martın-Vide, and Gheorghe Paun, editors, BrainstormingWeek on Membrane Computing, Tarragona, February 5-11 2003, pages85–100, Tarragona, February 5-11 2003.

[362] Rodica Ceterchi, Mutyam Madhu, Gheorghe Paun, and K.G. Subrama-nian. Array-rewriting P systems. Technical Report 26, Rovira i VirgiliUniversity, 2003.

[363] Rodica Ceterchi, Mutyam Madhu, Gheorghe Paun, and K.G. Subrama-nian. Array-rewriting P systems. In Matteo Cavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors, Brainstorming Week on MembraneComputing, Tarragona, February 5-11 2003, pages 118–134, Tarragona,February 5-11 2003.

[364] Rodica Ceterchi, Mutyam Madhu, Gheorghe Paun, and K.G. Subrama-nian. Array-rewriting P systems. Natural Computing, 2(3):229 – 249,August 2003.

[365] Rodica Ceterchi and Carlos Martın-Vide. Generating P systems withcontextual grammar. In Pre-Proceedings of Second Workshop on Mem-brane Computing, Curtea de Arges, Romania, August 2002.

[366] Rodica Ceterchi and Carlos Martın-Vide. Dynamic P systems. In Ghe-orghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Claudio Zandron,editors, Membrane Computing: International Workshop, WMC-CdeA

38

Page 39: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

2002, Curtea de Arges, Romania, August 19-23, 2002. Revised Papers.,volume 2597 of Lecture Notes in Computer Science, pages 146–186,Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[367] Rodica Ceterchi and Carlos Martın-Vide. P systems with communicationfor static sorting. Technical Report 26, Rovira i Virgili University, 2003.

[368] Rodica Ceterchi and Carlos Martın-Vide. P systems with communica-tion for static sorting. In Matteo Cavaliere, Carlos Martın-Vide, andGheorghe Paun, editors, Brainstorming Week on Membrane Computing,Tarragona, February 5-11 2003, pages 101–117, Tarragona, February 5-11 2003.

[369] Rodica Ceterchi and Mario J. Perez-Jimenez. Simulating Shuffle-Exchange networks with P systems. Technical Report 01/2004, Dept.of Computer Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[370] Rodica Ceterchi, Mario J. Perez-Jimenez, and Alexandru Ioan Tomescu.Sorting omega networks simulated with P systems: Optimal data layouts.In Erzsebet Csuhaj-Varju, Rudolf Freund, Marion Oswald, and Kai Salo-maa, editors, International Workshop on Computing with Biomolecules,pages 29–42, 2008.

[371] Rodica Ceterchi and Mario Jesus Perez-Jimenez. A perfect shuffle algo-rithm for reduction processes and its simulation with P systems. In In-ternational Conference on Computers and Communications-ICCC 2004,Baile Felix Spa, Oradea, ROMANIA, Oradea, ROMANIA, May 27-292004.

[372] Rodica Ceterchi and Mario Jesus Perez-Jimenez. Simulating parallelarchitectures with P systems. In Pre-proceedings of the Fifth Workshopon Membrane Computing (WMC5), Milano, Italy, June 2004, pages 184–185, Milano, Italy, June 2004.

[373] Rodica Ceterchi and Mario Jesus Perez-Jimenez. Simulating shuffle-exchange networks with P systems. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 117–129, Sevilla, Spain, February 2-72004.

[374] Rodica Ceterchi and Mario Jesus Perez-Jimenez. Simulating a classof parallel architectures: A broader perspective. In Proceedings ofthe ESF Exploratory Workshop on Cellular Computing (Complexity As-pects), Sevilla (Spain), January 31st - February 2nd, pages 131–148,2005.

[375] Rodica Ceterchi and Mario J. PUrez-JimUnez. On simulating a class ofparallel architectures. International Journal of Foundations of ComputerScience, 17(1):91–110, February 2006.

39

Page 40: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[376] Rodica Ceterchi and Dragos Sburlan. Simulating boolean circuits withP systems. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Comput-ing, International Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notes in ComputerScience, pages 104–122. Springer, July 2003.

[377] Rodica Ceterchi and Dragos Sburlan. Simulating boolean circuits with Psystems. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun,editors, Preproceedings of the Workshop on Membrane Computing, pages145–160, Tarragona, July 17-22 2003.

[378] Rodica Ceterchi and Alexandru Ioan Tomescu. Implementing sortingnetworks with spiking neural P systems. Fundamenta Informaticae,87(1):35–48, 2008.

[379] P.H. Chandra and K.G. Subramanian. On picture arrays generated by psystems. In Pre-Proc. of the sixth Workshop on Membrane Computing,WMC6, Vienna, Austria, pages 282–288, 2005.

[380] H. Chen, R. Freund, M. Ionescu, Gheorghe Paun, and M.J. Perez-Jimenez. On string languages generated by spiking neural p systems.Submitted, 2006.

[381] H. Chen, M. Ionescu, A. Paun, Gheorghe Paun, and B. Popa. On tracelanguages generated by spiking neural p systems. Submitted, 2006.

[382] H. Chen, T.-O. Ishdorj, and Gh. Paun. Computing along the axon. InPre-proceedings of International Conference on Bio-Inspired Computing -Theory and Applications, BIC-TA 2006, Membrane Computing Section,pages 60–70, Wuhan, China, September 2006.

[383] H. Chen, T.-O. Ishdorj, Gh. Paun, and M.J. Perez-Jimenez. Handlinglanguages with spiking neural p systems with extended rules. RomanianJournal of Information Science and Technology, 2006. Accepted.

[384] H. Chen, T.-O. Ishdorj, Gh. Paun, and M.J. Perez-Jimenez. Handlinglanguages with spiking neural p systems with extended rules. RomanianJournal of Information Science and Technology, 9(3):151–162, 2006.

[385] H. Chen, Gheorghe Paun, and M.J. Perez-Jimenez. Spiking neural psystems with extended rules. Submitted, 2006.

[386] Haiming Chen, Rudolf Freund, Mihai Ionescu, Gheorghe Paun, andMario-Jesus Perez-Jimenez. On string languages generated by spikingneural P systems. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun,Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors,Fourth Brainstorming Week on Membrane Computing, Sevilla, January30 - February 3, 2006. Volume I, pages 169–194. Fenix Editora, 2006.

40

Page 41: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[387] Haiming Chen, Mihai Ionescu, and Tseren-Onolt Ishdorj. On the effi-ciency of spiking neural P systems. In Miguel Angel Gutierrez-Naranjo,Gheorghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors, Fourth Brainstorming Week on Membrane Comput-ing, Sevilla, January 30 - February 3, 2006. Volume I, pages 195–206.Fenix Editora, 2006.

[388] Haiming Chen, Mihai Ionescu, Andrei Paun, Gheorghe Paun, and BiancaPopa. On trace languages generated by spiking neural P systems. InMiguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez,and Francisco Jose Romero-Campero, editors, Fourth BrainstormingWeek on Membrane Computing, Sevilla, January 30 - February 3, 2006.Volume I, pages 207–224. Fenix Editora, 2006.

[389] Haiming Chen, Tseren-Onolt Ishdorj, and Gheorghe Paun. Computingalong the axon. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun,Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors,Fourth Brainstorming Week on Membrane Computing, Sevilla, January30 - February 3, 2006. Volume I, pages 225–240. Fenix Editora, 2006.

[390] Haiming Chen, Tseren-Onolt Ishdorj, Gheorghe Paun, and Mario-JesusPerez-Jimenez. Spiking neural P systems with extended rules. InMiguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez,and Francisco Jose Romero-Campero, editors, Fourth BrainstormingWeek on Membrane Computing, Sevilla, January 30 - February 3, 2006.Volume I, pages 241–266. Fenix Editora, 2006.

[391] S. Cheruku, A. Paun, F.J. Romero-Campero, M.J. Perez-Jimenez, andO.H. Ibarra. Simulating fas-induced apoptosis by using p systems. InPre-proceedings of International Conference on Bio-Inspired Computing -Theory and Applications, BIC-TA 2006, Membrane Computing Section,pages 71–81, Wuhan, China, September 2006.

[392] S. Cheruku, A. Paun, F.J. Romero-Campero, M.J. Perez-Jimenez, andO.H. Ibarra. Simulating fas-induced apoptosis by using p systems. InProc. Bio-Inspired Computing – Theory and Applications Conf., BIC-TA2006, Wuhan, China, September 2006, Membrane Computing Section.,2006.

[393] Smitha Cheruku, Andrei Paun, Francisco J. Romero-Campero, Mario J.Perez-Jimenez, and Oscar H. Ibarra. Simulating FAS-induced apoptosisby using P systems. Progress in Natural Science, 17(4):424–431, 2007.

[394] L. Cienciala and L. Ciencialova. Membrane automata with priorities.Journal of Computer Science and Technology, 19(1):89–97, 2004.

[395] L. Cienciala and L. Ciencialova. Membrane automata with priorities.Journal of Computer Science and Technology, 19(1):89–97, 2004.

41

Page 42: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[396] L. Cienciala, L. Ciencialova, P. Frisco, and P. Sosik. On the power ofdeterministic and sequential communicating P systems. InternationalJournal of Foundations of Computer Science, 18(2):415–431, 2007.

[397] L. Cienciala, L. Ciencialova, and A. Kelemenova. On the number ofagents in P colonies. In G. Eleftherakis and Gh. Paun P. Kefalas, edi-tors, Pre-proceedings of Membrane Computing, International Workshop- WMC8, pages 227–242, Thessaloniki, Greece, 2007.

[398] Ludek Cienciala. P automata with priorities working in sequential andmaximally parallel mode. In Pre-proceedings of the Fifth Workshop onMembrane Computing (WMC5), Milano, Italy, June 2004, pages 186–195, Milano, Italy, June 2004.

[399] Ludek Cienciala. P automata. PhD thesis, University of Ostrava, Os-trava, Czech Republic, 2005.

[400] Ludek Cienciala and Lucie Ciencialova. P automata with priorities. InArtiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors, Pre-proceedings of the Workshop on Membrane Computing, pages 161–168,Tarragona, July 17-22 2003.

[401] Ludek Cienciala and Lucie Ciencialova. Membrane automata with prior-ities. Journal of Computer Science and Technology, 19(1):89–97, January2004. Special issue on bioinformatics.

[402] Ludek Cienciala and Alica Kelemenova. Zivot ve svete symbolu: pocitanipomoci membran. Slezska Univ., Opava, 2002. in vol ”Kognice a umelyzivot II”.

[403] Ludek Cienciala, Lucie Ciencialova, and Alice Kelemenova. Homoge-neous p colonies. Computing and Informatics, 27(3+):481–496, 2008.

[404] L. Ciencialova and L. Cienciala. Variations on the theme: P colonies. InD. Kol and A. Meduna, editors, Proc. First Intern. Workshop WFM06,pages 27–34, Ostrava, 2007.

[405] G. Ciobanu. A programming perspective of the membrane computing.In Proc. of ICCCC 2006, Oradea, Romania, June 2006, pages 13–22.

[406] G. Ciobanu, O. Andrei, and D. Lucanu. Structural operational seman-tics of p systems. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 1–23, 2005.

[407] G. Ciobanu and L. Cornacel. Probabilistic transitions for p systems. InProc. Bio-Inspired Computing – Theory and Applications Conf., BIC-TA2006 Wuhan, China, September 2006, Membrane Computing Section.,2006.

42

Page 43: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[408] G. Ciobanu and L. Cornacel. Probabilistic transitions for p systems. InPre-proceedings of International Conference on Bio-Inspired Computing -Theory and Applications, BIC-TA 2006, Membrane Computing Section,pages 82–92, Wuhan, China, September 2006.

[409] G. Ciobanu and M. Gontineac. P machines: An automata approach tomembrane computing. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg,editors, Pre-proceedings of Membrane Computing, International Work-shop, WMC7, pages 274–289, Leiden, The Netherlands, 2006.

[410] G. Ciobanu and M. Gontineac. Networks of mealy multiset automata.In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedingsof Membrane Computing, International Workshop - WMC8, pages 243–254, Thessaloniki, Greece, 2007.

[411] G. Ciobanu and V.M. Gontineac. Algebraic and coalgebraic aspects ofmembrane computing. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 289–311, 2005.

[412] G. Ciobanu and D. Lucanu. What is an event for membrane systems?In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 255–266,Thessaloniki, Greece, 2007.

[413] G. Ciobanu and Gheorghe Paun. The minimal parallelism is still univer-sal (for p systems with symport/antiport rules), 2005.

[414] Gabriel Ciobanu. Distributed computing in P Systems with antiportcommunication. Submitted, 2002.

[415] Gabriel Ciobanu. Distributed algorithms over communicating membranesystems. BioSystems, 70(2):123–133, July 2003.

[416] Gabriel Ciobanu. Cellular meta-programming. In Pre-Proc. Unconven-tional Programming Paradigms, UPP04, Le Mont Saint-Michel, pages55–63, September 2004.

[417] Gabriel Ciobanu. Pumps systems of membranes. Technical Report01/2004, Dept. of Computer Sciences and Artificial Intelligence, Univ.of Sevilla, 2004.

[418] Gabriel Ciobanu. Pumps systems of membranes. In Gheorghe Paun,Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second Brainstorming Week on Membrane Comput-ing, Sevilla, Spain, February 2-7 2004, pages 130–133, Sevilla, Spain,February 2-7 2004.

[419] Gabriel Ciobanu. Modeling Cell–Mediated Immunity by Means of P Sys-tems, pages 157–178. Springer-Verlag, 2005.

43

Page 44: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[420] Gabriel Ciobanu and Bogdan Aman. On the relationship between mem-branes and ambients. Biosystems, 91(3):515–530, 2008.

[421] Gabriel Ciobanu, Vlad Ciubotariu, and Bogdan Tanasa. A computa-tional model of membrane transportation. Submitted.

[422] Gabriel Ciobanu and Laura Cornacel. Probabilistic transitions for P sys-tems. Progress in Natural Science, 17(4):431–441, 2007.

[423] Gabriel Ciobanu, Rahul Desai, and Akash Kumar. Membrane systemsand distributed computing. In Pre-Proceedings of Second Workshop onMembrane Computing, Curtea de Arges, Romania, August 2002.

[424] Gabriel Ciobanu, Rahul Desai, and Akash Kumar. Membrane systemsand distributed computing. In Gheorghe Paun, Grzegorz Rozenberg,Arto Salomaa, and Claudio Zandron, editors, Membrane Computing:International Workshop, WMC-CdeA 2002, Curtea de Arges, Romania,August 19-23, 2002. Revised Papers., volume 2597 of Lecture Notes inComputer Science, pages 187–202, Curtea de Arges, Romania, July 2003.Springer-Verlag, Berlin.

[425] Gabriel Ciobanu, Daniel Dumitriu, Dorin Huzum, Gabriel Moruz, andBogdan Tanasa. Client-server P systems in modeling molecular interac-tion. In Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Clau-dio Zandron, editors, Membrane Computing: International Workshop,WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002. Re-vised Papers., volume 2597 of Lecture Notes in Computer Science, pages203–218, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[426] Gabriel Ciobanu and M. Gontineac. Mealy membrane automata and Psystems complexity. In Proceedings of the ESF Exploratory Workshop onCellular Computing (Complexity Aspects), Sevilla (Spain), January 31st- February 2nd, pages 149–164, 2005.

[427] Gabriel Ciobanu and Mihai Gontineac. Mealy multiset automata. In-ternational Journal of Foundations of Computer Science, 17(1):111–126,February 2006.

[428] Gabriel Ciobanu and Mihai Gontineac. Multisets and their encodings.In Oscar H. Ibarra and Petr Sosık, editors, Proceedings of Prague Inter-national Workshop on Membrane Computing, pages 1–10, 2008.

[429] Gabriel Ciobanu, Linqiang Pan, Gheorghe Paun, and Mario J.Perez-Jimenez. P systems with minimal parallelism. Theoretic Computer Sci-ence, 378:117–130, 2007.

[430] Gabriel Ciobanu and Dorin Paraschiv. Membrane software. a P systemsimulator. Technical Report 17/01, Rovira i Virgili University, Tarrag-ona, Spain, 2001. Technical Report 17/01 of Research Group on Mathe-matical Linguistics.

44

Page 45: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[431] Gabriel Ciobanu and Dorin Paraschiv. Membrane software. A P systemsimulator. In Pre-Proceedings of Workshop on Membrane Computing,Curtea de Arges, Romania, August 2001.

[432] Gabriel Ciobanu and Dorin Paraschiv. P system software simulator. Fun-damenta Informaticae, 49(1-3):61–66, January 2002. Special Issue: Mem-brane Computing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, Gheorghe Paun.

[433] Gabriel Ciobanu, Gheorghe Paun, and Mario J. Perez-Jimenez, editors.Applications of Membrane Computing. Springer-Verlag, 2005. (442 + viiipages) - in press.

[434] Gabriel Ciobanu, Gheorghe Paun, and Mario Jesus Perez-Jimenez. Onthe branching complexity of P systems. In Proceedings of the ESF Ex-ploratory Workshop on Cellular Computing (Complexity Aspects), Sevilla(Spain), January 31st - February 2nd, pages 165–176, 2005.

[435] Gabriel Ciobanu, Gheorghe Paun, and Gh. Stefanescu. Sevilla carpetsassociated with P systems. In Matteo Cavaliere, Carlos Martın-Vide, andGheorghe Paun, editors, Brainstorming Week on Membrane Computing,Tarragona, February 5-11 2003, pages 135–140, Tarragona, February 5-11 2003.

[436] Gabriel Ciobanu, Gheorghe Paun, and Gheorghe Stefanescu. Sevilla car-pets associated with P systems. Technical Report 26, Rovira i VirgiliUniversity, 2003.

[437] Gabriel Ciobanu, Gheorghe Paun, and Gheorghe Stefanescu. P trans-ducers. New Generation Computing, 2004. To appear.

[438] Gabriel Ciobanu and Dana Petcu. P accelerators: Parallelization of se-quential simulators. In Proceedings of the ESF Exploratory Workshop onCellular Computing (Complexity Aspects), Sevilla (Spain), January 31st- February 2nd, pages 177–186, 2005.

[439] Gabriel Ciobanu and Andreas Resios. Computational complexity of sim-ple P systems. Fundamenta Informaticae, 87(1):49–59, 2008.

[440] Gabriel Ciobanu and Bogdan Tanasa. Gene expression by software mech-anisms. Technical Report 17/01, Rovira i Virgili University, Tarragona,Spain, 2001. Technical Report 17/01 of Research Group on MathematicalLinguistics.

[441] Gabriel Ciobanu and Bogdan Tanasa. Gene expression by softwaremechanisms. In Pre-Proceedings of Workshop on Membrane Computing,Curtea de Arges, Romania, August 2001.

45

Page 46: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[442] Gabriel Ciobanu and Bogdan Tanasa. Gene expression by software mech-anisms. Fundamenta Informaticae, 49(1-3):67–80, January 2002. SpecialIssue: Membrane Computing (WMC-CdeA2001) Guest Editor(s): Car-los Martın-Vide, Gheorghe Paun.

[443] Gabriel Ciobanu, Bogdan Tanasa, Daniel Dumitriu, Dorin Huzum, andGabriel Moruz. Molecular networks as communicating membranes. InPre-Proceedings of Second Workshop on Membrane Computing, Curteade Arges, Romania, August 2002.

[444] Gabriel Ciobanu and G. Wenyuan. A parallel implementation of transi-tion P systems. In Artiom Alhazov, Carlos Martın-Vide, and GheorghePaun, editors, Pre-proceedings of the Workshop on Membrane Comput-ing, pages 169–184, Tarragona, July 17-22 2003.

[445] Gabriel Ciobanu and Guo Wenyuan. P systems running on a cluster ofcomputers. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Comput-ing, International Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notes in ComputerScience, pages 123–139. Springer, July 2003.

[446] Monica Cardona M. Angels Colomer, Mario J. Perez-Jimenez, DelfıSanuy, and Antoni Margalida. Modeling ecosystems using P systems:The bearded vulture, a case study. In David Wolfe Corne, PierluigiFrisco, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, edi-tors, Membrane Computing: 9th International Workshop, volume 5391of Lecture Notes in Computer Science, pages 137–156, 2009.

[447] A. Cordon-Franco, M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, andA. Riscos-Nunez. Cellular solutions to some numerical np-complete prob-lems. a prolog implementation molecular computational models. Uncon-ventional Approaches (M. Gheorghe, ed.), 2004. Idea-Group, London2004, 115–149.

[448] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, and Mario J.Perez-Jimenez. Looking for P Truth. Technical Report 01/2004, Dept.of Computer Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[449] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, and Mario J.Perez-Jimenez. Looking for P truth. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 134–138, Sevilla, Spain, February 2-72004.

[450] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez. Exploring computation trees as-sociated with P systems. In Pre-proceedings of the Fifth Workshop on

46

Page 47: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

Membrane Computing (WMC5), Milano, Italy, June 2004, pages 196–204, Milano, Italy, June 2004.

[451] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez. Weak metrics on configurations ofa P system. Technical Report 01/2004, Dept. of Computer Sciences andArtificial Intelligence, Univ. of Sevilla, 2004.

[452] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez. Weak metrics on configurations ofa P system. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second BrainstormingWeek on Membrane Computing, Sevilla, Spain, February 2-7 2004, pages139–151, Sevilla, Spain, February 2-7 2004.

[453] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, Agustın Riscos-Nunez, and Fernando Sancho-Caparrini. Imple-menting in Prolog an effective cellular solution for the Knapsack, prob-lem. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, ed-itors, Preproceedings of the Workshop on Membrane Computing, pages185–196, Tarragona, July 17-22 2003.

[454] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, Agustın Riscos-Nunez, and Fernando Sancho-Caparrini. Imple-menting in Prolog an effective cellular solution to the Knapsack prob-lem. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Membrane Computing, Interna-tional Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Re-vised Papers, volume 2933 of Lecture Notes in Computer Science, pages140–152. Springer, July 2003.

[455] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. A Prolog simulator for deter-ministic P systems with active membranes. Technical Report 26, Rovirai Virgili University, 2003.

[456] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. A Prolog simulator for deter-ministic P systems with active membranes. In Matteo Cavaliere, Car-los Martın-Vide, and Gheorghe Paun, editors, Brainstorming Week onMembrane Computing, Tarragona, February 5-11 2003, pages 141–154,Tarragona, February 5-11 2003.

[457] Andres Cordon-Franco, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. A Prolog simulator for deter-ministic P systems with active membranes. New Generation Computing,22(4):349–363, August 2004.

47

Page 48: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[458] Andres Cordon-Franco and Fernando Sancho-Caparrini. Non-discrete Psystems. In Pre-proceedings of the Fifth Workshop on Membrane Com-puting (WMC5), Milano, Italy, June 2004, pages 205–207, Milano, Italy,June 2004.

[459] Andres Cordon-Franco and Fernando Sancho-Caparrini. A note on com-plexity measures for probabilistic P systems. Journal of Universal Com-puter Science, 10(5):559–568, May 2004.

[460] Monica Cordona, M. Angels Colomer, Mario J. Perez Jimenez, and AlbaZaragoza. Hierarchical clustering with membrane computing. Computingand Informatics, 27(3+):497–513, 2008.

[461] David W. Corne and Pierluigi Frisco. Dynamics of HIV infection studiedwith cellular automata and conformon-P systems. Biosystems, 91(3):531–544, 2008.

[462] C. Csuhaj-Varju, Antonio Di Nola, Gheorghe Paun, Mario Jesus Perez-Jimenez, and Gyorgy Vaszil. Editing configurations of P systems. InProceedings of the Third Brainstorming Week on Membrane Computing,Sevilla (Spain), January 31st - February 4th, pages 131–154, 2005.

[463] E. Csuhaj-Varju, R. Freund, and D. Sburlan. Modeling the dynamicalparallelism of bio-systems. In H.J. Hoogeboom, Gh. Paun, and G. Rozen-berg, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop, WMC7, pages 290–310, Leiden, The Netherlands, 2006.

[464] E. Csuhaj-Varju, R. Freund, and D. Sburlan. Modeling the dynamicalparallelism of bio-systems. In H.J. Hoogeboom, Gh. Paun, and G. Rozen-berg, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop, WMC7, pages 290–310, Leiden, The Netherlands, 2006.

[465] E. Csuhaj-Varju, M. Margenstern, and G. Vaszil. P colonies with abounded number of cells and programs. In H.J. Hoogeboom, Gh. Paun,and G. Rozenberg, editors, Pre-proceedings of Membrane Computing, In-ternational Workshop, WMC7, pages 311–322, Leiden, The Netherlands,2006.

[466] E. Csuhaj-Varju and G. Vaszil. P systems with string objects and withcommunication by request. In G. Eleftherakis and Gh. Paun P. Kefalas,editors, Pre-proceedings of Membrane Computing, International Work-shop - WMC8, pages 267–278, Thessaloniki, Greece, 2007.

[467] Erzsebet Csuhaj-Varju. On gemmating P systems. In EMCC Workshop,Vienna, November 2003.

[468] Erzsebet Csuhaj-Varju. P automata: Models, results, and research top-ics. In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 1–11, Milano, Italy, June 2004.

48

Page 49: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[469] Erzsebet Csuhaj-Varju. EP-colonies: Micro-organisms in a cell-like envi-ronment. In Proceedings of the Third Brainstorming Week on MembraneComputing, Sevilla (Spain), January 31st - February 4th, pages 123–130,2005.

[470] Erzsebet Csuhaj-Varju, Oscar H. Ibarra, and Gyorgy Vaszil. On thecomputational complexity of P automata. Submitted, 2004. DNA 10.

[471] Erzsebet Csuhaj-Varju, Maurice Margenstern, Gyorgy Vaszil, and SergeiVerlan. Small computationally complete symport/antiport P systems.In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors, Fourth Brain-storming Week on Membrane Computing, Sevilla, January 30 - February3, 2006. Volume I, pages 267–282. Fenix Editora, 2006.

[472] Erzsebet Csuhaj-Varju, Maurice Margenstern, Gyorgy Vaszil, and SergeyVerlan. On small universal antiport P systems. Theoretical ComputerScience, 372(2-3):152–164, 2007.

[473] Erzsebet Csuhaj-Varju, Carlos Martın-Vide, Gheorghe Paun, and ArtoSalomaa. From Watson-Crick L Systems to Darwinian P systems. Tech-nical Report 26, Rovira i Virgili University, 2003.

[474] Erzsebet Csuhaj-Varju, Carlos Martın-Vide, Gheorghe Paun, and ArtoSalomaa. From Watson-Crick L Systems to Darwinian P systems. InMatteo Cavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors,Brainstorming Week on Membrane Computing, Tarragona, February 5-11 2003, pages 155–170, Tarragona, February 5-11 2003.

[475] Erzsebet Csuhaj-Varju, Carlos Martın-Vide, Gheorghe Paun, and ArtoSalomaa. From Watson-Crick L Systems to Darwinian P systems. Nat-ural Computing, 2(3):299–318, August 2003.

[476] Erzsebet Csuhaj-Varju, Antonio Di Nola, Gheorghe Paun, Mario JesusPerez-Jimenez, and Gyorgy Vaszil. Editing configurations of P systems.Submitted, 2005.

[477] Erzsebet Csuhaj-Varju, Gheorghe Paun, and Gyorgy Vaszil. Grammarsystems vs. membrane computing: The case of CD grammar systems.Submitted, 2004.

[478] Erzsebet Csuhaj-Varju, Gheorghe Paun, and Gyorgy Vaszil. Grammarsystems vs. membrane computing: The case of PC grammar systems.Submitted, 2004.

[479] Erzsebet Csuhaj-Varju, Gheorghe Paun, and Gyorgy Vaszil. Tissue-likeP systems with dynamically emerging requests. International Journal ofFoundations of Computer Science, 19(3):729–745, 2008.

49

Page 50: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[480] Erzsebet Csuhaj-Varju and Gyorgy Vaszil. P Automata. In Pre-Proceedings of Second Workshop on Membrane Computing, Curtea deArges, Romania, August 2002.

[481] Erzsebet Csuhaj-Varju and Gyorgy Vaszil. The computational complex-ity of P automata, accepting P systems with communication only. InEMCC Workshop, Vienna, November 2003.

[482] Erzsebet Csuhaj-Varju and Gyorgy Vaszil. New results and researchdirections concerning P Automata, accepting P systems with communi-cation only. Technical Report 26, Rovira i Virgili University, 2003.

[483] Erzsebet Csuhaj-Varju and Gyorgy Vaszil. New results and researchdirections concerning P Automata, accepting P systems with commu-nication only. In Matteo Cavaliere, Carlos Martın-Vide, and GheorghePaun, editors, Brainstorming Week on Membrane Computing, Tarrag-ona, February 5-11 2003, pages 171–179, Tarragona, February 5-11 2003.

[484] Erzsebet Csuhaj-Varju and Gyorgy Vaszil. P Automata or purely com-municating accepting P systems. In Gheorghe Paun, Grzegorz Rozen-berg, Arto Salomaa, and Claudio Zandron, editors, Membrane Com-puting: International Workshop, WMC-CdeA 2002, Curtea de Arges,Romania, August 19-23, 2002. Revised Papers., volume 2597 of LectureNotes in Computer Science, pages 219–233, Curtea de Arges, Romania,July 2003. Springer-Verlag, Berlin.

[485] Erzsebet Csuhaj-Varju and Gyorgy Vaszil. Reducing the size of extendedgemmating P systems. In Pre-proceedings of the Fifth Workshop on Mem-brane Computing (WMC5), Milano, Italy, June 2004, pages 208–220,Milano, Italy, June 2004.

[486] Erzsebet Csuhaj-Varju and Gyorgy Vaszil. (mem)brane automata. The-oretical Computer Science, 404(1-2):52–60, 2008.

[487] Eugen Czeizler. Self-activating P systems. In Pre-Proceedings of SecondWorkshop on Membrane Computing, Curtea de Arges, Romania, August2002.

[488] Eugen Czeizler. Self-activating P systems. In Gheorghe Paun, Grze-gorz Rozenberg, Arto Salomaa, and Claudio Zandron, editors, Mem-brane Computing: International Workshop, WMC-CdeA 2002, Curteade Arges, Romania, August 19-23, 2002. Revised Papers., volume 2597of Lecture Notes in Computer Science, pages 234–246, Curtea de Arges,Romania, July 2003. Springer-Verlag, Berlin.

[489] Silvano Dal-Zilio and Enrico Formenti. On the dynamics of PB systems.In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors,Preproceedings of the Workshop on Membrane Computing, pages 197–208, Tarragona, July 17-22 2003.

50

Page 51: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[490] Silvano Dal-Zilio and Enrico Formenti. On the dynamics of PB Systems:A Petri net view. In Carlos Martın-Vide, Giancarlo Mauri, GheorghePaun, Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Com-puting, International Workshop, WMC 2003, Tarragona, Spain, July,17-22, 2003, Revised Papers, volume 2933 of Lecture Notes in ComputerScience, pages 153–167. Springer, July 2003.

[491] Z. Dang, O.H. Ibarra, and C. Li. Decidability of model-checking p sys-tems. Submitted, 2006.

[492] Z. Dang, O.H. Ibarra, C. Li, and G. Xie. On model-checking of p systems.UC05, accepted, 2005.

[493] Z. Dang, O.H. Ibarra, S. Woodworth, and H.C. Yen. On sym-port/antiport systems and semilinear sets. In Pre-Proc. of the sixthWorkshop on Membrane Computing, WMC6, Vienna, Austria, pages312–335, 2005.

[494] Zhe Dang and Oscar H. Ibarra. On P systems operating in sequentialand limited parallel modes. In Workshop on Descriptional Complexityof Formal Systems, London-Ontario, 2004.

[495] Zhe Dang, Oscar H. Ibarra, Cheng Li, and Gaoyan Xie. On model-checking of P systems. In Unconventional Computation 4th InternationalConference, UC 2005, Sevilla, Spain, October 3-7, 2005. Proceedings,volume 3699 of Lecture Notes in Computer Science. Springer Berlin /Heidelberg, 2005.

[496] Vincent Danos, Jrme Fret, Walter Fontana, Russell Harmer, and JeanKrivine. Investigation of a biological repair scheme. In David WolfeCorne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing: 9th International Workshop,volume 5391 of Lecture Notes in Computer Science, pages 1–12, 2009.

[497] D.K. Das and T. Renz. A simulator model for p systems with activemembranes. In Proceedings 2006 IEEE Conference on Emerging Tech-nologies - Nanoelectronics, pages 338–340, Singapore, January 2006.

[498] Dan Dascalu, editor. Romanian Journal of Information Science andTechnology, volume 4, 2001.

[499] J. Dassow and E. Csuhaj-Varju. On the syntactic complexity of dar-winian membrane systems. In BWMC4, Sevilla, 2006.

[500] J. Dassow and G. Vaszil. P finite automata and regular languagesover countably infinite alphabets. In H.J. Hoogeboom, Gh. Paun, andG. Rozenberg, editors, Pre-proceedings of Membrane Computing, Inter-national Workshop, WMC7, pages 323–336, Leiden, The Netherlands,2006.

51

Page 52: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[501] Jurgen Dassow and Erzsebet Csuhaj-Varju. On the syntactic complexityof darwinian membrane systems. In Miguel Angel Gutierrez-Naranjo,Gheorghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors, Fourth Brainstorming Week on Membrane Comput-ing, Sevilla, January 30 - February 3, 2006. Volume II, pages 1–16.Fenix Editora, 2006.

[502] Jurgen Dassow and Gheorghe Paun. On the power of membrane com-puting. Journal of Universal Computer Science, 5(2):33–49, 1999.

[503] Jurgen Dassow and Gheorghe Paun. P systems with communicationbased on concentration. Acta Cybernetica, 15(1):9–24, 2001.

[504] Jurgen Dassow, Gheorghe Paun, Gabriel Thierrin, and Sheng Yu. Tree-systems of morphisms. Acta Informatica, 38(2):131–153, November 2001.

[505] Alfonso Ortega de la Puente, Rafael Nunez-Hervas, Marina de la Cruz-Echeandia, and Manuel Alfonseca. Christiansen grammar for some P sys-tems. In Third Brainstorming Week on Membrane Computing, Sevilla,2005, Sevilla, 2005.

[506] G. Delzanno and L. Van Begin. On the dynamics of PB systems withvolatile membranes. In G. Eleftherakis and Gh. Paun P. Kefalas, edi-tors, Pre-proceedings of Membrane Computing, International Workshop- WMC8, pages 279–300, Thessaloniki, Greece, 2007.

[507] Giorgio Delzanno and Laurent Begin. A biologically inspired model withfusion and clonation of membranes. In Cristian S. Calude, Jose FelixCosta, Rudolf Freund, Marion Oswald, and Grzegorz Rozenberg, edi-tors, Proceedings of the 7th international conference on UnconventionalComputing, volume 5204 of Lecture Notes in Computer Science, pages64–82, 2008.

[508] K. S. Dersanambika, Kamala Krithivasan, and K. G. Subramanian. Psystems generating hexagonal picture languages. In Carlos Martın-Vide,Giancarlo Mauri, Gheorghe Paun, Grzegorz Rozenberg, and Arto Sa-lomaa, editors, Membrane Computing, International Workshop, WMC2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, volume 2933of Lecture Notes in Computer Science, pages 168–180. Springer, July2003.

[509] K.S. Dersanambika, K. Krithivasan, H.K. Agarwal, and J. Gupta. Hexag-onal contextual array P systems. World Scientific, Singapore.

[510] K.S. Dersanambika and Kamala Krithivasan. Contextual array P sys-tems. International Journal of Computer Mathematics, 81(8):955–969,August 2004.

52

Page 53: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[511] K.S. Dersanambika, Kamala Krithivasan, and K.G. Subramanian. Psystems generating hexagonal picture languages. In Artiom Alhazov,Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedings of theWorkshop on Membrane Computing, pages 209–221, Tarragona, July 17-22 2003.

[512] Antonio Di-Nola, Gheorghe Paun, Mario J. Perez-Jimenez, and FrancescRossello. (imprecise topic about) Handling imprecision in P Systems.Submitted, 2004.

[513] J.M. Campos Diaz, E. Lopez Dominguez, S. Lopez Escobar, J. EstudilloRamirez, and L.D. Huerta Hernandez. Development of a cleaner robot us-ing techniques of membranes. Technical report, Report INAOE, Puebla,Mexic, 2006. Report INAOE.

[514] D. Diaz-Pernil, M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, andA. Nunez. A cellular solution to subset sum using division of non-elementary membranes and dissolution, with time and initial resourcesbounded by log k. In G. Eleftherakis and Gh. Paun P. Kefalas, edi-tors, Pre-proceedings of Membrane Computing, International Workshop- WMC8, pages 301–316, Thessaloniki, Greece, 2007.

[515] D. Diaz-Pernil, M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, andA. Nunez. Subset sum with tissue p systems with cell division. In M.A.Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, and A. Nunez, edi-tors, Proceedings of the Fifth Brainstorming Week on Membrane Com-puting, pages 113–130, Sevilla (Spain), January 29th - February 2 2007.

[516] D. Diaz-Pernil, M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, andA. Riscos-Nunez. An efficient solution to 3-col with tissue p systems.In N. Busi and C. Zandron, editors, Proceedings MeCBIC 2006, Venice,2006.

[517] Daniel Dıaz-Pernil, Miguel A. Gutierrez-Naranjo, Mario J. PerezJimenez, and Agustın Riscos-Nunez. Solving subset sum in linear timeby using tissue P systems with cell division. In Jose Mira and Jose R.Alvarez, editors, Proceedings of the 2nd international work-conference onThe Interplay Between Natural and Artificial Computation, Part I: Bio-inspired Modeling of Cognitive Tasks, volume 4527 of Lecture Notes inComputer Science, pages 170–179, 2007.

[518] Daniel Dıaz-Pernil, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez. Solving the partition problem byusing tissue-like P systems with cell division. In Proceedings of the ThirdInternational Conference on Bio-Inspired Computing: Theories and Ap-plications, pages 43–47, 2008.

[519] Daniel Dıaz-Pernil, Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez. Solving the partition problem by

53

Page 54: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

using tissue-like P systems with cell division. In Daniel Dıaz-Pernil, Car-men Graciani, Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, IgnacioPerez-Hurtado, and Agustın Riscos-Nunez, editors, Sixth BrainstormingWeek on Membrane Computing, pages 123–134, 2008.

[520] Daniel Dıaz-Pernil, Miguel-Angel Gutierrez-Naranjo, and Mario-JesusPerez-Jimenez. Solving 3-col with tissue P systems. In Miguel AngelGutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Fran-cisco Jose Romero-Campero, editors, Fourth Brainstorming Week onMembrane Computing, Sevilla, January 30 - February 3, 2006. VolumeII, pages 17–30. Fenix Editora, 2006.

[521] Daniel Dıaz-Pernil, Ignacio Perez-Hurtado, and Mario J. Perez-Jimenez Agustın Riscos-Nunez. A P-Lingua programming environmentfor membrane computing. In David Wolfe Corne, Pierluigi Frisco, Gheo-rghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors, MembraneComputing: 9th International Workshop, volume 5391 of Lecture Notesin Computer Science, pages 187–203, 2009.

[522] Richard Domine. Theorem proving using membrane computing. Master’sthesis, Dresden University, 2001.

[523] Agostino Dovier, Carla Piazza, and Gianfranco Rossi. Multiset con-straints and P systems. In Cristian Calude, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Multiset Processing: Mathemati-cal, Computer Science, and Molecular Computing Points of View, volume2235 of Lecture Notes in Computer Science, pages 103–122. Springer-Verlag, 2001.

[524] Agostino Dovier, Carla Piazza, and Gianfranco Rossi. A uniform ap-proach to constraint-solving for lists multisets, compact lists, and sets.ACM Transactions on Computational Logic, 9(3):15:1–15:30, 2008.

[525] Stanley Dunn and Peter Stivers. P system models of bistable, enzymedriven chemical reaction networks. In Jose Mira and Jose R. Alvarez,editors, Proceedings of the 2nd international work-conference on The In-terplay Between Natural and Artificial Computation, Part I: Bio-inspiredModeling of Cognitive Tasks, volume 4527 of Lecture Notes in ComputerScience, pages 203–213, 2007.

[526] G. Bel Enguix and M.D. Jimenez-Lopez. Computing speech acts, arti-ficial intelligence. In Ch. Bussler and D. Fensel, editors, Methodology,Systems and Applications, LNAI 3192, pages 236–245. Springer, 2004.

[527] G. Bel Enguix and M.D. Jimenez-Lopez. Computing dialogues withmembranes. In Logic and Communication in Multi-Agent Systems,LCMAS, 2005.

54

Page 55: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[528] G. Bel Enguix and D. Jimenez Lopez. Modelling parallel phenomena inconversations with P systems. In in G. Ciobanu, Gh. Paun, Pre-Proc. ofFirst International Workshop on Theory and Application of P Systems,Timisoara, Romania, September 26-27, pages 27–30, 2005.

[529] G. Bel Enguix and M.D. Jimenez Lopez. Lp colonies for language evo-lution. a preview. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 179–192, 2005.

[530] Raffael Fassler, Thomas Hinze, Thorsten Lenser, and Peter Dittrich.Construction of oscillating chemical register machines on binary numbersusing mass-action kinetics. In Oscar H. Ibarra and Petr Sosık, editors,Proceedings of Prague International Workshop on Membrane Computing,pages 11–22, 2008.

[531] L. Fernandez, F. Arroyo, I. Garcia, and A. Gutierrez. Parallel softwarearchitectures analysis for implementing P systems. In M. Sugisaka andH. Tanaka, editors, Proceedings of the 12th Int. Symposium on ArtificialLife and Robotics, pages 494–499, Beppu, Oita, Japan, Jan 25-27 2007.

[532] L. Fernandez, F. Arroyo, J.A. Tejedor, and J. Castellanos. Massively par-allel algorithm for evolution rules application in transition p systems. InH.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedingsof Membrane Computing, International Workshop, WMC7, pages 337–343, Leiden, The Netherlands, 2006.

[533] L. Fernandez, V.J. Martinez, F. Arroyo, and L.F. Mingo. A hardwarecircuit for selecting active rules in transition p systems. In in G. Ciobanu,Gh. Paun, Pre-Proc. of First International Workshop on Theory andApplication of P Systems, Timisoara, Romania, September 26-27, pages45–48, 2005.

[534] Claudio Ferretti, Giancarlo Mauri, Gheorghe Paun, and Claudio Zan-dron. On three variants of P systems with string-objects. TechnicalReport 17/01, Rovira i Virgili University, Tarragona, Spain, 2001. Tech-nical Report 17/01 of Research Group on Mathematical Linguistics.

[535] Claudio Ferretti, Giancarlo Mauri, Gheorghe Paun, and Claudio Zan-dron. On three variants of P systems with string-objects. In Pre-Proceedings of Workshop on Membrane Computing, Curtea de Arges,Romania, August 2001.

[536] Claudio Ferretti, Giancarlo Mauri, Gheorghe Paun, and Claudio Zan-dron. On three variants of rewriting P systems. Theoretical ComputerScience, 301(1-3):201–215, May 2003.

[537] Federico Fontana and Giuditta Franco. Finding the maximum elementusing P systems. Journal of Universal Computer Science, 10(5):567–580,May 2004.

55

Page 56: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[538] Federico Fontana and Giuditta Franco. Maximum search using P sys-tems. Technical Report 01/2004, Dept. of Computer Sciences and Arti-ficial Intelligence, Univ. of Sevilla, 2004.

[539] Federico Fontana and Giuditta Franco. Maximum search using Psystems. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second Brainstorm-ing Week on Membrane Computing, Sevilla, Spain, February 2-7 2004,pages 152–163, Sevilla, Spain, February 2-7 2004.

[540] Federico Fontana and Vicenzo Manca. Discrete solution of differentialequations by P metabolic algorithm. In Miguel Angel Gutierrez-Naranjo,Gheorghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors, Fourth Brainstorming Week on Membrane Comput-ing, Sevilla, January 30 - February 3, 2006. Volume II, pages 31–40.Fenix Editora, 2006.

[541] Federico Fontana and Vincenzo Manca. Discrete solutions to differentialequations by metabolic p systems. Theoretical Computer Science, 372(2-3):165–182, 2007.

[542] Federico Fontana and Vincenzo Manca. Predator-prey dynamics in P sys-tems ruled by metabolic algorithm. Biosystems, 91(3):545–557, 2008.

[543] G. Franco, P.H. Guzzi, V. Manca, and T. Mazza. Mitotic oscillatorsas mp graphs. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, edi-tors, Pre-proceedings of Membrane Computing, International Workshop,WMC7, pages 344–356, Leiden, The Netherlands, 2006.

[544] G. Franco, N. Jonoska, B. Osborn, and A. Plaas. Knee joint injury andrepair modeled by membrane systems. Biosystems. To appear.

[545] G. Franco, N. Jonoska, B. Osborn, and A. Plaas. Modeling knee injuriesby membrane systems. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, 2005.

[546] G. Franco and M. Margenstern. Computing by floating strings. In N. Busiand C. Zandron, editors, Proceedings MeCBIC 2006, Venice, 2006.

[547] Giuditta Franco. Membrane Kauffman Networks. Technical Report01/2004, Dept. of Computer Sciences and Artificial Intelligence, Univ.of Sevilla, 2004.

[548] Giuditta Franco. Membrane Kauffman networks. In Gheorghe Paun,Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second Brainstorming Week on Membrane Comput-ing, Sevilla, Spain, February 2-7 2004, pages 164–167, Sevilla, Spain,February 2-7 2004.

56

Page 57: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[549] Giuditta Franco, Natasa Jonoska, Barbara Osborn, and Anna Plaas.Knee joint injury and repair modeled by membrane systems. Biosystems,91(3):473–488, 2008.

[550] Giuditta Franco and Vincenzo Manca. A membrane system for the leuco-cyte selective recruitment. In Artiom Alhazov, Carlos Martın-Vide, andGheorghe Paun, editors, Preproceedings of the Workshop on MembraneComputing, pages 222–230., Tarragona, July 17-22 2003.

[551] Giuditta Franco and Vincenzo Manca. A membrane system for the leuko-cyte selective recruitment. In Carlos Martın-Vide, Giancarlo Mauri, Ghe-orghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors, MembraneComputing, International Workshop, WMC 2003, Tarragona, Spain,July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notes in Com-puter Science, pages 181–190. Springer, July 2003.

[552] Giuditta Franco and Vincenzo Manca. Modeling some biological phe-nomena by P systems. In EMCC Workshop, Vienna, November 2003.

[553] Franziska Freund, Rudolf Freund, and Marion Oswald. Splicing Test TubeSystems and Their Relation to Splicing Membrane Systems, volume 2950of Lecture Notes in Computer Science, pages 139–151. Springer, 2004.

[554] Franziska Freund, Rudolf Freund, Marion Oswald, Maurice Margen-stern, Yurii Rogozhin, and Sergey Verlan. P systems with cut-ting/recombination rules assigned to membranes. In Carlos Martın-Vide,Giancarlo Mauri, Gheorghe Paun, Grzegorz Rozenberg, and Arto Sa-lomaa, editors, Membrane Computing, International Workshop, WMC2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, volume 2933of Lecture Notes in Computer Science, pages 191–202. Springer, July2003.

[555] R. Freund and M. Oswald. P colonies working in the maximally paralleland in the sequential mode. In in G. Ciobanu, Gh. Paun, Pre-Proc. ofFirst International Workshop on Theory and Application of P Systems,Timisoara, Romania, September 26-27, pages 49–56, 2005.

[556] R. Freund and M. Oswald. Tissue p systems with mate and drip oper-ations. In N. Busi and C. Zandron, editors, Proceedings MeCBIC 2006,Venice, 2006.

[557] R. Freund and M. Oswald. Spiking neural p systems with inhibitoryaxons. In M. Sugisaka and H. Tanaka, editors, Proceedings of the 12thInt. Symposium on Artificial Life and Robotics, pages 509–512, Beppu,Oita, Japan, Jan 25-27 2007.

[558] R. Freund, M. Oswald, and T. Schirk. How a membrane agent buysgoods in a membrane store. In Proc. Bio-Inspired Computing – Theoryand Applications Conf., BIC-TA 2006, Wuhan, China, September 2006,Membrane Computing Section., 2006.

57

Page 58: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[559] R. Freund, M. Oswald, and T. Schirk. How a membrane agent buys goodsin a membrane store. In Pre-proceedings of International Conferenceon Bio-Inspired Computing - Theory and Applications, BIC-TA 2006,Membrane Computing Section, pages 93–102, Wuhan, China, September2006.

[560] R. Freund and A. Paun. P systems with active membranes and withoutpolarizations. Soft Computing, 9(9):657–663, September 2005.

[561] R. Freund, Gh. Paun, and M.J. Perez-Jimenez. Polarizationless p sys-tems with active membranes working in the minimally parallel man-ner. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, andA. Nunez, editors, Proceedings of the Fifth Brainstorming Week on Mem-brane Computing, pages 131–156, Sevilla (Spain), January 29th - Febru-ary 2 2007.

[562] R. Freund, Gh. Paun, G. Rozenberg, and A. Salomaa. Membrane Com-puting. LNCS 3850. Springer-Verlag, 2006.

[563] R. Freund and S. Verlan. A formal framework for P systems. In G. Eleft-herakis and Gh. Paun P. Kefalas, editors, Pre-proceedings of MembraneComputing, International Workshop - WMC8, pages 317–330, Thessa-loniki, Greece, 2007.

[564] Rudolf Freund. Generalized P systems. In Gabriel Ciobanu and Gheo-rghe Paun, editors, Fundamentals of Computation Theory, FCT’99, Iasi,1999, volume 1684? of Lecture Notes in Computer Science, pages 281–292, Berlin, 1999. Springer-Verlag.

[565] Rudolf Freund. Generalized P systems with splicing and cut-ting/recombination. In Workshop on Formal Languages, FCT99, Iasi,1999.

[566] Rudolf Freund. Generalized P systems with splicing and cut-ting/recombination. Grammars, 2(3):189–199, December 1999.

[567] Rudolf Freund. Sequential P systems. In Rudolf Freund, editor, Theori-etag 2000. Workshop on New Computing Paradigms, pages 177–183. TUUniversity Vienna, 2000.

[568] Rudolf Freund. Sequential P systems. Romanian Journal of InformationScience and Technology, 4(1-2):77–88, 2001.

[569] Rudolf Freund. Special variants of P systems inducing an infinite hiearchywith respect to the number of membranes. Bulletin of the EATCS,(75):209–219, October 2001.

[570] Rudolf Freund. Energy-controlled P systems. In Pre-Proceedings of Sec-ond Workshop on Membrane Computing, Curtea de Arges, Romania,August 2002.

58

Page 59: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[571] Rudolf Freund. Energy-controlled P systems. In Gheorghe Paun, Grze-gorz Rozenberg, Arto Salomaa, and Claudio Zandron, editors, Mem-brane Computing: International Workshop, WMC-CdeA 2002, Curteade Arges, Romania, August 19-23, 2002. Revised Papers., volume 2597of Lecture Notes in Computer Science, pages 247–260, Curtea de Arges,Romania, July 2003. Springer-Verlag, Berlin.

[572] Rudolf Freund. Asynchronous P systems. In Pre-proceedings of the FifthWorkshop on Membrane Computing (WMC5), Milano, Italy, June 2004,pages 12–28, Milano, Italy, June 2004.

[573] Rudolf Freund. Asynchronous P Systems on arrays and strings. Submit-ted, 2004. DLT’04 - Eighth International Conference on Developmentsin Language Theory. To appear in Proceedings of DLT’04 Lecture Notesin Computer Science, Springer. 2004.

[574] Rudolf Freund. P systeme im sequentiellen modus. In Workshop FormaleMethoden der Linguistik, and 14 Theorietag Automaten und FormaleSprachen, pages 57–61, Potsdam, 2004.

[575] Rudolf Freund. Particular results for variants of P systems with onecatalyst in one membrane. In Miguel Angel Gutierrez-Naranjo, Gheo-rghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero,editors, Fourth Brainstorming Week on Membrane Computing, Sevilla,January 30 - February 3, 2006. Volume II, pages 41–50. Fenix Editora,2006.

[576] Rudolf Freund, Artiom Alhazov, Yurii Rogozhin, and Sergey Verlan.Communication P Systems, pages 118–143. Oxford University Press,2010.

[577] Rudolf Freund and Franziska Freund. Molecular computing with general-ized homogeneous P systems. In Anne Condon and Grzegorz Rozenberg,editors, Proc. Conf. DNA6, pages 113–125, Leiden, 2000.

[578] Rudolf Freund and Franziska Freund. Molecular computing with gener-alized homogeneous P-systems. In A. Condon and G. Rozenberg, editors,DNA Computing: 6th International Workshop on DNA-Based Comput-ers, DNA 2000, Leiden, The Netherlands, June 13-17, 2000, RevisedPapers, volume 2054 of Lecture Notes In Computer Science, pages 113–125, Leiden, The Netherlads, June 2001. Springer-Verlag Heidelberg.

[579] Rudolf Freund and Theresia Gschwandtner. P systems for modellingbiological processes in living cells. In Rudolf Freund and Marion Oswald,editors, 16. Theorietag Automaten und Formale Sprachen, pages 46–50,2006.

59

Page 60: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[580] Rudolf Freund, Oscar H. Ibarra, Gheorghe Paun, and H.-C. Yen. Ma-trix languages, register machines, vector addition systems. In Proceed-ings of the Third Brainstorming Week on Membrane Computing, Sevilla(Spain), January 31st - February 4th, pages 155–168, 2005.

[581] Rudolf Freund, Mihai Ionescu, and Marion Oswald. Extended spikingneural P systems with decaying spikes and/or total spiking. In GyorgyVaszil, editor, Proceedings of the International Workshop on Automatafor Cellular and Molecular Computing, pages 64–75, 2007.

[582] Rudolf Freund, Mihai Ionescu, and Marion Oswald. Extended spikingneural P systems with decaying spikes and/or total spiking. InternationalJournal of Foundations of Computer Science, 19(5):1223–1234, 2008.

[583] Rudolf Freund, Lila Kari, Marion Oswald, and Petr Sosık. Computation-ally universal P systems without priorities: two catalysts are sufficient.Theoretical Computer Science, 2004. In press.

[584] Rudolf Freund and Marian Kogler. Drip and mate operations acting intest tube systems and tissue-like P systems. In G. Ciobanu, editor, ThirdWorkshop on Membrane Computing and Biologically Inspired ProcessCalculi 2009, pages 123–136, 2009.

[585] Rudolf Freund and Marian Kogler. Hybrid transition modes in tissue Psystems. In Gh. Paun, M.J. Perez-Jimenez, and A. Riscos-Nuez, editors,Tenth Workshop on Membrane Computing, pages 228–239, 2009.

[586] Rudolf Freund, Marian Kogler, and Sergey Verlan. P automata with con-trolled use of minimal communication rules. In H. Bordihn, R. Freund,M. Holzer, M. Kutrib, and F. Otto, editors, Workshop on Non-ClassicalModels for Automata and Applications (NCMA), pages 107–119, 2009.

[587] Rudolf Freund, Alberto Leporati, Marion Oswald, and Claudio Zandron.Sequential P systems with unit rules and energy assigned to membranes.Technical Report 01/2004, Dept. of Computer Sciences and ArtificialIntelligence, Univ. of Sevilla, 2004.

[588] Rudolf Freund, Alberto Leporati, Marion Oswald, and Claudio Zan-dron. Sequential P systems with unit rules and energy assigned tomembranes. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second BrainstormingWeek on Membrane Computing, Sevilla, Spain, February 2-7 2004, pages168–182, Sevilla, Spain, February 2-7 2004.

[589] Rudolf Freund, Carlos Martın-Vide, Adam Obtulowicz, and GheorghePaun. On three classes of automata-like P systems. In Zoltan Esikand Zoltan Fulop, editors, Developments in Language Theory, 7th In-ternational Conference, DLT 2003, Szeged, Hungary, July 7-11, 2003,Proceedings, volume 2710 of Lecture Notes In Computer Science, pages292–303. Springer-Verlag Heidelberg, 2003.

60

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[590] Rudolf Freund, Carlos Martın-Vide, and Gheorghe Paun. Computingwith membranes: Three more collapsing hierarchies, 2000.

[591] Rudolf Freund, Carlos Martın-Vide, and Gheorghe Paun. From regu-lated rewriting to computing with membranes: collapsing hierarchies.Theoretical Computer Science, 312(2-3):143–188, January 2004.

[592] Rudolf Freund and Marion Oswald. Variants of GP Systems. Techni-cal Report 17/01, Rovira i Virgili University, Tarragona, Spain, 2001.Technical Report 17/01 of Research Group on Mathematical Linguistics.

[593] Rudolf Freund and Marion Oswald. Variants of GP Systems. In Pre-Proceedings of Workshop on Membrane Computing, Curtea de Arges,Romania, August 2001.

[594] Rudolf Freund and Marion Oswald. GP Systems with forbidding con-text. Fundamenta Informaticae, 49(1-3):81–102, January 2002. SpecialIssue: Membrane Computing (WMC-CdeA2001) Guest Editor(s): Car-los Martın-Vide, Gheorghe Paun.

[595] Rudolf Freund and Marion Oswald. A short note on analysing P systemswith antiport rules. Bulletin of the EATCS, (78):231–236, October 2002.

[596] Rudolf Freund and Marion Oswald. Complexity of P automata withcatalysts. In EMCC Workshop, Vienna, November 2003.

[597] Rudolf Freund and Marion Oswald. P systems with activated/prohibitedmembrane channels. In Gheorghe Paun, Grzegorz Rozenberg, Arto Sa-lomaa, and Claudio Zandron, editors, Membrane Computing: Interna-tional Workshop, WMC-CdeA 2002, Curtea de Arges, Romania, August19-23, 2002. Revised Papers., volume 2597 of Lecture Notes in ComputerScience, pages 261–269, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[598] Rudolf Freund and Marion Oswald. P systems with conditional com-munication rules assigned to membranes. In Artiom Alhazov, CarlosMartın-Vide, and Gheorghe Paun, editors, Preproceedings of the Work-shop on Membrane Computing, pages 231–240, Tarragona, July 17-222003.

[599] Rudolf Freund and Marion Oswald. P systems with elementary graphproductions. Technical Report 26, Rovira i Virgili University, 2003.

[600] Rudolf Freund and Marion Oswald. P systems with elementary graphproductions. In Matteo Cavaliere, Carlos Martın-Vide, and GheorghePaun, editors, Brainstorming Week on Membrane Computing, Tarrag-ona, February 5-11 2003, pages 180–188, Tarragona, February 5-11 2003.

61

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[601] Rudolf Freund and Marion Oswald. Modelling grammar systems by tis-sue P systems. In Pre-Proceedings of Workshop on Grammar Systems,Computer and Automation Research Institute (SZTAKI) of the Hungar-ian Academy of Sciences (MTA), pages 162–179, Budapest, July 5-92004.

[602] Rudolf Freund and Marion Oswald. P systems with antiport rules forevolution rules. Technical Report 01/2004, Dept. of Computer Sciencesand Artificial Intelligence, Univ. of Sevilla, 2004.

[603] Rudolf Freund and Marion Oswald. P systems with antiport rules for evo-lution rules. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second BrainstormingWeek on Membrane Computing, Sevilla, Spain, February 2-7 2004, pages183–192, Sevilla, Spain, February 2-7 2004.

[604] Rudolf Freund and Marion Oswald. P systems with dynamic channelstransporting membrane vesicles. Submitted, 2004.

[605] Rudolf Freund and Marion Oswald. P systems with local graph produc-tions. New Generation Computing, 22(4):365–375, August 2004.

[606] Rudolf Freund and Marion Oswald. Tissue p systems with sym-port/antiport rules of one symbol are computationally universal. Sub-mitted, 2005.

[607] Rudolf Freund and Marion Oswald. Tissue P systems with sym-port/antiport rules of one symbol are computationally universal. In Pro-ceedings of the ESF Exploratory Workshop on Cellular Computing (Com-plexity Aspects), Sevilla (Spain), January 31st - February 2nd, pages187–200, 2005.

[608] Rudolf Freund and Marion Oswald. P colonies and prescribed teams.Intern. J. Computer Math., 2006.

[609] Rudolf Freund and Marion Oswald. Small universal antiport P systemsand universal multiset grammars. In Miguel Angel Gutierrez-Naranjo,Gheorghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors, Fourth Brainstorming Week on Membrane Comput-ing, Sevilla, January 30 - February 3, 2006. Volume II, pages 51–64.Fenix Editora, 2006.

[610] Rudolf Freund and Marion Oswald. Partial halting in P systems. Inter-national Journal of Foundations of Computer Science, 18(6):1215–1225,2007.

[611] Rudolf Freund and Marion Oswald. Regular omega-languages definedby finite extended spiking neural P systems. Fundamenta Informaticae,83(1-2):65–73, 2008.

62

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[612] Rudolf Freund, Marion Oswald, Franziska Freund, Maurice Margen-stern, Sergey Verlan, and Yurii Rogozhin. P systems with cut-ting/recombination rules assigned to membranes. In Artiom Alhazov,Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedings of theWorkshop on Membrane Computing, pages 241–251, Tarragona, July 17-22 2003.

[613] Rudolf Freund, Marion Oswald, and Andrei Paun. P systems generatingtrees. In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 221–232, Milano, Italy, June2004.

[614] Rudolf Freund, Marion Oswald, and Thomas Schirk. How a membraneagent buys goods in a membrane store. Progress in Natural Science,17(4):442–448, 2007.

[615] Rudolf Freund, Marion Oswald, and Ludwig Staiger. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing, International Workshop, WMC2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, July.

[616] Rudolf Freund, Marion Oswald, and Ludwig Staiger. Omega-P automatawith communication rules. In Artiom Alhazov, Carlos Martın-Vide, andGheorghe Paun, editors, Preproceedings of the Workshop on MembraneComputing, pages 252–265, Tarragona, July 17-22 2003.

[617] Rudolf Freund and Andrei Paun. Membrane systems with sym-port/antiport: Universality results. In Gheorghe Paun, Grzegorz Rozen-berg, Arto Salomaa, and Claudio Zandron, editors, Membrane Com-puting: International Workshop, WMC-CdeA 2002, Curtea de Arges,Romania, August 19-23, 2002. Revised Papers., volume 2597 of LectureNotes in Computer Science, pages 270–287, Curtea de Arges, Romania,July 2003. Springer-Verlag, Berlin.

[618] Rudolf Freund and Andrei Paun. P systems with active membranes andwithout polarizations. Technical Report 01/2004, Dept. of ComputerSciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[619] Rudolf Freund and Andrei Paun. P systems with active membranes andwithout polarizations. In Gheorghe Paun, Agustın Riscos-Nunez, Al-varo Romero-Jimenez, and Fernando Sancho-Caparrini, editors, SecondBrainstorming Week on Membrane Computing, Sevilla, Spain, February2-7 2004, pages 193–205, Sevilla, Spain, February 2-7 2004.

[620] Rudolf Freund and Gheorghe Paun. On deterministic P Systems. Sub-mitted.

[621] Rudolf Freund, Gheorghe Paun, and Mario J. Perez-Jimenez. Tissue-like P systems with channel-states. Technical Report 01/2004, Dept. ofComputer Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

63

Page 64: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[622] Rudolf Freund, Gheorghe Paun, and Mario J. Perez-Jimenez. Tissue-like P systems with channel-states. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 206–223, Sevilla, Spain, February 2-72004.

[623] Rudolf Freund, Gheorghe Paun, and Mario J. Perez-Jimenez. Tissue Psystems with channel states. Theoretical Computer Science, 2004. Inpress.

[624] Rudolf Freund and Sergey Verlan. P systems working in the k-restrictedminimally parallel derivation mode. In Erzsebet Csuhaj-Varju, RudolfFreund, Marion Oswald, and Kai Salomaa, editors, International Work-shop on Computing with Biomolecules, pages 43–52, 2008.

[625] P. Frisco. About p systems with symport/antiport. Soft Computing,9(9):664–672, September 2005.

[626] P. Frisco. Infinite hierarchies of conformon-p systems. In H.J. Hooge-boom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Mem-brane Computing, International Workshop, WMC7, pages 357–371, Lei-den, The Netherlands, 2006.

[627] P. Frisco. Conformon-p systems with negative values. In Gh. PaunG. Eleftherakis, P. Kefalas, editor, Pre-proceedings of Membrane Com-puting, International Workshop - WMC8, pages 331–344, Thessaloniki,Greece, 2007.

[628] P. Frisco. From molecular computing to modelling with conformons andcomputing by observation. Ramanujan Math. Soc. Lecture Notes Series,(3):85–101, 2007.

[629] P. Frisco and D. W. Corne. Dynamics of hiv infection studied withcellular automata and conformon-p systems. Submitted, 2006.

[630] P. Frisco and D. W. Corne. Dynamics of hiv infection studied withconformon-p systems. In The Seventh International Conference on Sys-tems Biology, October 9-13, 2006, Yokohama, Japan, Yokohama, Japan,october 9–13 2006.

[631] P. Frisco and D.W. Corne. Advances in modeling the dynamics of hivinfection with conformon-P systems. In G. Eleftherakis and Gh. PaunP. Kefalas, editors, Pre-proceedings of Membrane Computing, Interna-tional Workshop - WMC8, pages 21–32, Thessaloniki, Greece, 2007.

[632] P. Frisco and Ranulf T. Gibson. A simulator and an evolution programfor conformon-P systems. In in G. Ciobanu, Gh. Paun, Pre-Proc. ofFirst International Workshop on Theory and Application of P Systems,Timisoara, Romania, September 26-27, pages 57–60, 2005.

64

Page 65: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[633] P. Frisco and P Systems. Petri nets and program machine. In Pre-Proc. ofthe sixth Workshop on Membrane Computing, WMC6, Vienna, Austria,pages 336–354, 2005.

[634] Pierluigi Frisco. Membrane computing based on splicing: Improvements.Technical Report 140, University of Auckland, 2000.

[635] Pierluigi Frisco. Membrane computing based on splicing: Improvements.In Pre-Proceedings Workshop on Multiset Processing, Curtea de Arges,Romania, August 2000.

[636] Pierluigi Frisco. On two variants of splicing P systems. Romanian Journalof Information Science and Technology, 4(1-2):89–100, 2001.

[637] Pierluigi Frisco. About P systems with symport/antiport. TechnicalReport 01/2004, Dept. of Computer Sciences and Artificial Intelligence,Univ. of Sevilla, 2004.

[638] Pierluigi Frisco. About P systems with symport/antiport. In GheorghePaun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and FernandoSancho-Caparrini, editors, Second Brainstorming Week on MembraneComputing, Sevilla, Spain, February 2-7 2004, pages 224–236, Sevilla,Spain, February 2-7 2004.

[639] Pierluigi Frisco. The Conformon-P System: A molecular and cell biology-inspired computability model. Theoretical Computer Science, 312(2-3):295–319, January 2004.

[640] Pierluigi Frisco. Theory of Molecular Computing. Splicing and MembraneSystems. PhD thesis, Leiden University, The Netherlands, 2004.

[641] Pierluigi Frisco. Computing with Cells. Advances in Membrane Comput-ing. Oxford University Press, 2008.

[642] Pierluigi Frisco and Ranulf T. Gibson. A simulator for conformon Psystems. In Pre-Proc. of the sixth Workshop on Membrane Computing,WMC6, Vienna, Austria, pages 355–372, 2005.

[643] Pierluigi Frisco and Hendrik Jan Hoogeboom. Simulating counter au-tomata by P systems with symport/antiport. In Pre-Proceedings of Sec-ond Workshop on Membrane Computing, Curtea de Arges, Romania,August 2002.

[644] Pierluigi Frisco and Hendrik Jan Hoogeboom. Simulating counter au-tomata by P systems with symport/antiport. In Gheorghe Paun, Grze-gorz Rozenberg, Arto Salomaa, and Claudio Zandron, editors, Mem-brane Computing: International Workshop, WMC-CdeA 2002, Curteade Arges, Romania, August 19-23, 2002. Revised Papers., volume 2597of Lecture Notes in Computer Science, pages 288–301, Curtea de Arges,Romania, July 2003. Springer-Verlag, Berlin.

65

Page 66: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[645] Pierluigi Frisco and Hendrik Jan Hoogeboom. P systems with sym-port/antiport simulating counter automata. Acta Informatica, 41(2-3):145–170, December 2004.

[646] Pierluigi Frisco, Hendrik Jan Hoogeboom, and Paul Sant. A direct con-struction of a universal P system. Technical Report 17/01, Rovira iVirgili University, Tarragona, Spain, 2001. Technical Report 17/01 ofResearch Group on Mathematical Linguistics.

[647] Pierluigi Frisco, Hendrik Jan Hoogeboom, and Paul Sant. A direct con-struction of a universal P system. In Pre-Proceedings of Workshop onMembrane Computing, Curtea de Arges, Romania, August 2001.

[648] Pierluigi Frisco, Hendrik Jan Hoogeboom, and Paul Sant. A directconstruction of a universal P system. Fundamenta Informaticae, 49(1-3):103–122, January 2002. Special Issue: Membrane Computing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, Gheorghe Paun.

[649] Pierluigi Frisco and Sungchul Ji. Info-energy P systems. In ProceedingsDNA 8 conference, Sapporo, Japan, June 2002. Hokkaido University.

[650] Pierluigi Frisco and Sungchul Ji. Towards a hierarchy of info-energy Psystems. In Pre-Proceedings of Second Workshop on Membrane Comput-ing, Curtea de Arges, Romania, August 2002.

[651] Pierluigi Frisco and Sungchul Ji. Towards a hierarchy of conformons-Psystems. In Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, andClaudio Zandron, editors, Membrane Computing: International Work-shop, WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002.Revised Papers., volume 2597 of Lecture Notes in Computer Science,pages 302–318, Curtea de Arges, Romania, July 2003. Springer-Verlag,Berlin.

[652] Pierluigi Frisco and Gheorghe Paun. No cycles in compartments. start-ing from conformon-P, systems. In Daniel Dıaz-Pernil, Carmen Gra-ciani, Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, Ignacio Perez-Hurtado, and Agustın Riscos-Nunez, editors, Sixth Brainstorming Weekon Membrane Computing, pages 157–179, 2008.

[653] Juan Alberto Frutos, Fernando Arroyo, and Alberto Arteta. Usefulnessstates in new P system communication architectures. In David WolfeCorne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing: 9th International Workshop,volume 5391 of Lecture Notes in Computer Science, pages 169–186, 2009.

[654] Cheng Fu, Zhengwei Qi, and Jinyuan You. Encoding P systems in non-interleaving π-Calculus. In Pre-proceedings of the Fifth Workshop onMembrane Computing (WMC5), Milano, Italy, June 2004, pages 233–244, Milano, Italy, June 2004.

66

Page 67: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[655] K. Furukawa, T. Sato, and T. Chikayama, editors. New GenerationComputing. Special Feature. Membrane Computing, volume 22. Ohmsha,Ltd. and Springer, August 2004.

[656] Yan Gao and Hendrik Jan Hoogeboom. P systems with single passen-ger carriers. International Journal of Foundations of Computer Science,18(6):1227–1235, 2007.

[657] M. Garcia-Arnau, D. Manrique, A. Rodriguez-Paton, and P. Sosik. A psystem and a constructive membrane-inspired dna algorithm for solvingthe maximum clique problem. BioSystems, 90(3):687–697, 2007.

[658] M. Garcia-Arnau, D. Perez, A. Rodriguez-Paton, and P. Sosik. Spikingneural p systems: Stronger normal forms. In M.A. Gutierrez-Naranjo,Gh. Paun, A. Romero-Jimenez, and A. Nunez, editors, Proceedings ofthe Fifth Brainstorming Week on Membrane Computing, pages 157–178,Sevilla (Spain), January 29th - February 2 2007.

[659] M. Garcia-Arnau, D. Perez, A. Rodriguez-Paton, and P. Sosik. On thepower of elementary operations in spiking neural p systems. NaturalComputing, to appear, 2008.

[660] D. Genova. Models in membrane computing. In Joint Annual MeetingMAA Florida Section and FTYCMA, Univ. of Central Florida, February2004.

[661] H. Georgescu. An efficient way to model p systems by x machine systems.Studia Univ. Babes-Bolyai, Informatica, 46(1):3–17, 2001.

[662] Alexandros Georgiou and Marian Gheorghe. Generative devices used ingraphics. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun,editors, Preproceedings of the Workshop on Membrane Computing, pages266–272, Tarragona, July 17-22 2003.

[663] Alexandros Georgiou, Marian Gheorghe, and Francesco Bernardini.Membrane Based Devices Used in Computer Graphics, pages 253–280.Springer-Verlag, 2005.

[664] Renana Gershoni, Ehud Keinan, Gheorghe Paun, Ron Piran, Tamar Rat-ner, and Sivan Shoshani. Research topics arising from the (planned)P systems implementation experiment in Technion. In Daniel Dıaz-Pernil, Carmen Graciani, Miguel Angel Gutierrez-Naranjo, GheorghePaun, Ignacio Perez-Hurtado, and Agustın Riscos-Nunez, editors, SixthBrainstorming Week on Membrane Computing, pages 183–192, 2008.

[665] M. Gheorghe. P systems - a new computational approach in systemsbiology. In Pre-proceedings of International Conference on Bio-InspiredComputing - Theory and Applications, BIC-TA 2006, Membrane Com-puting Section, pages 7–14, Wuhan, China, September 2006.

67

Page 68: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[666] M. Gheorghe, N. Krasnogor, Gh. Paun, and G. Rozenberg. Membranecomputing model for tiles self-assembly. In First Intern. Symp. on Cel-lular Computing, Warwick, December 2004.

[667] M. Gheorghe and Gheorghe Paun. Computing by self-assembly: Dnamolecules, polyominoes, cells. Submitted, 2005.

[668] Marian Gheorghe. P systems: A modelling language. In Pre-Proc. Un-conventional Programming Paradigms, UPP04, Le Mont Saint-Michel,pages 23–27, September 2004.

[669] Marian Gheorghe and Mike Holcombe, editors. BioSystems-Cell Com-puting, volume 70. Elsevier Ireland Ltd., July 2003. Pages 83–186.

[670] Marian Gheorghe, Mike Holcombe, and Petros Kefalas. Computationalmodels of collective foraging. In Proc. Fourth Intern. Workshop on Infor-mation Processing in IPCAT 2001, Cells and Tissues, Brussels, August2001.

[671] Marian Gheorghe, Mike Holcombe, and Petros Kefalas. Eilenberg Psystems: a bio-computational model. In Proc. First Balkan Conf. onInformatics, pages 147–160, Thessaloniki, Greece, 2003.

[672] Marian Gheorghe and Florentin Ipate. On testing P systems. InDavid Wolfe Corne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing: 9th Interna-tional Workshop, volume 5391 of Lecture Notes in Computer Science,pages 204–216, 2009.

[673] Marian Gheorghe, Natalio Krasnogor, and Miguel Camara. P systemsapplications to systems biology. Biosystems, 91(3):435–437, 2008.

[674] Marian Gheorghe, Vincenzo Manca, and Francisco J. Romero-Campero.Deterministic and stochastic P systems for modeling cellular processes.Natural Computing, to appear.

[675] Marian Gheorghe, Carlos Martın-Vide, Victor Mitrana, and Mario J.Perez-Jimenez. An agent based approach of collective foraging. In JoseMira and Jose R. Alvarez, editors, Artificial Neural Nets. Problem Solv-ing Methods 7th International Work-Conference on Artificial and NaturalNeural Networks, IWANN 2003, Mao, Menorca, Spain, June 3-6. Pro-ceedings, Part II., volume 2687 of Lecture Notes in Computer Science,pages 639–645. Springer, 2003.

[676] Jean Louis Giavitto and Olivier Michel. MGS: Implementing a unifiedview on four biologically inspired computing models. Technical Report17/01, Rovira i Virgili University, Tarragona, Spain, 2001. TechnicalReport 17/01 of Research Group on Mathematical Linguistics.

68

Page 69: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[677] Jean-Louis Giavitto and Olivier Michel. MGS: Implementing a unifiedview on four biologically inspired computing models. In Pre-Proceedingsof Workshop on Membrane Computing, Curtea de Arges, Romania, Au-gust 2001.

[678] Jean-Louis Giavitto and Olivier Michel. Accretive rules in Cayley P sys-tems. In Pre-Proceedings of Second Workshop on Membrane Computing,Curtea de Arges, Romania, August 2002.

[679] Jean Louis Giavitto and Olivier Michel. The topological structures ofmembrane computing. Fundamenta Informaticae, 49(1-3):123–145, Jan-uary 2002. Special Issue: Membrane Computing (WMC-CdeA2001)Guest Editor(s): Carlos Martın-Vide, Gheorghe Paun.

[680] Jean-Louis Giavitto and Olivier Michel. Accretive rules in Cayley P sys-tems. In Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Clau-dio Zandron, editors, Membrane Computing: International Workshop,WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002. Re-vised Papers., volume 2597 of Lecture Notes in Computer Science, pages319–338, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[681] F. Javier Gil, Luis Fernandez, Fernando Arroyo, and Juan Albertode Frutos. Parallel algorithm for P systems implementation in multi-processors. In Masanori Sugisaka and Hiroshi Tanaka, editors, 13th In-ternational Symposium on Artificial Life and Robotics, pages 491–495,2008.

[682] David Gilbert, Rainer Breitling, Monika Heiner, and Robin Donaldson.An introduction to biomodel engineering, illustrated for signal transduc-tion pathways. In David Wolfe Corne, Pierluigi Frisco, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Computing:9th International Workshop, volume 5391 of Lecture Notes in ComputerScience, pages 13–28, 2009.

[683] M. Gontineac. Mealy membrane automata: an automata-like approachto membrane computing. In Proc. of ICCCC 2006, Oradea, Romania,June 2006, pages 222–227.

[684] C. Graciani and A. Riscos-Nunez. Looking for simple common schemes todesign recognizer p systems with active membranes that solve numericaldecision problems. UC05, accepted, 2005.

[685] C. Graciani and Agustın Riscos-Nunez. Looking for simple commonschemes to design recognizer p systems with active membranes thatsolve numerical decision problems. In CiE2005: New ComputationalParadigms, Amsterdam, 2005.

[686] C. Graciani-Diaz, M.A. Gutierrez-Naranjo, and M.J. Perez-Jimenez. Amembrane computing model for ballistic depositions. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, and A. Riscos-Nunez, editors,

69

Page 70: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

Proceedings of the Fifth Brainstorming Week on Membrane Computing,pages 179–198, Sevilla (Spain), January 29th - February 2 2007.

[687] Carmen Graciani-Dıaz and Agustın Riscos-Nunez. Looking for simplecommon schemes to design recognizer P systems with active membranesthat solve numerical decision problems. In Unconventional Computa-tion 4th International Conference, UC 2005, Sevilla, Spain, October 3-7,2005. Proceedings, volume 3699 of Lecture Notes in Computer Science.Springer Berlin / Heidelberg, 2005.

[688] Radu Gramatovici and Gemma Bel-Enguix. Parsing with P Automata,pages 389–412. Springer-Verlag, 2005.

[689] A. Gutierrez, L. Fernandez, F. Arroyo, and G. Bravo. Optimizing mem-brane system implementation with multisets and evolution rules com-pression. In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Computing, International Workshop - WMC8,pages 345–362, Thessaloniki, Greece, 2007.

[690] Abraham Gutierrez, Luis Fernandez, Fernando Arroyo, and SantiagoAlonso. Suitability of using microcontrollers in implementing new P sys-tem communication architectures. In Masanori Sugisaka and HiroshiTanaka, editors, 13th International Symposium on Artificial Life andRobotics, pages 496–499, 2008.

[691] M. Gutierrez-Naranjo and M.J. Perez-Jimenez. P systems with activemembranes, without polarizations and without dissolution: a character-ization of p. UC05, accepted, 2005.

[692] M. A. Gutierrez-Naranjo, M. J. Perez-Jimenez, A. Riscos-Nunez, andF. J. Romero-Campero. Characterizing tractability with membrane cre-ation. In in G. Ciobanu, Gh. Paun, Pre-Proc. of First InternationalWorkshop on Theory and Application of P Systems, Timisoara, Roma-nia, September 26-27, pages 61–68, 2005.

[693] M.A. Gutierrez-Naranjo. Fractals and p systems. Manuscript, 2006.

[694] M.A. Gutierrez-Naranjo, M.J. Perez Jimenez, and F.J. Romero Campero.A linear solution for qsat with membrane creation. In Pre-Proc. ofthe sixth Workshop on Membrane Computing, WMC6, Vienna, Austria,pages 395–409, 2005.

[695] M.A. Gutierrez-Naranjo, M.J. Perez Jimenez, A. Riscos Nunez, andF.J. Romero Campero. On the power of dissolution in p systems withactive membranes. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 373–394, 2005.

[696] M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, and A. Riscos-Nunez. Afast P system for finding a balanced 2-partition. Soft Computing,9(9):673–678, September 2005.

70

Page 71: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[697] M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, A. Riscos-Nunez, and F.J.Romero-Campero. A membrane computing view on tumours. In Proc.Bio-Inspired Computing – Theory and Applications Conf., BIC-TA 2006Wuhan, China, September 2006, Membrane Computing Section., 2006.

[698] M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, A. Riscos-Nunez, and F.J.Romero-Campero. A membrane computing view on tumours. In Pre-proceedings of International Conference on Bio-Inspired Computing -Theory and Applications, BIC-TA 2006, Membrane Computing Section,pages 103–112, Wuhan, China, September 2006.

[699] M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, A. Riscos-Nunez, and F.J.Romero-Campero. On the efficiency of cell-like and tissue-like recognizermembrane systems. In Proceedings of NICSO, 2006.

[700] M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, A. Riscos-Nunez, F.J.Romero-Campero, and A. Romero-Jimenez. Characterizing tractabilityby cell-like membrane systems. World Scientific, Singapore.

[701] M.A. Gutierrez-Naranjo, M.J. Perez-Jimenez, and F.J. Romero-Campero. A linear solution of subset sum problem by using membranecreation. In J. Mira and J.R. Alvarez, editors, IWINAC 2005, Las Pal-mas de Gran Canaria, LNCS 3561, pages 258–267. Springer, 2005.

[702] Miguel A. Gutierrez-Naranjo and Mario J. Perez-Jimenez. Hebbian learn-ing from spiking neural P systems view. In David Wolfe Corne, PierluigiFrisco, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, edi-tors, Membrane Computing: 9th International Workshop, volume 5391of Lecture Notes in Computer Science, pages 217–230, 2009.

[703] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez. Solving numerical NP-complete problems using P systemswith active membranes: the partition problem and beyond. In EMCCWorkshop, Vienna, November 2003.

[704] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez. An efficient cellular solution for the partition problem.Technical Report 01/2004, Dept. of Computer Sciences and ArtificialIntelligence, Univ. of Sevilla, 2004.

[705] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez. An efficient cellular solution for the Partition Prob-lem. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez,and Fernando Sancho-Caparrini, editors, Second Brainstorming Week onMembrane Computing, Sevilla, Spain, February 2-7 2004, pages 237–246,Sevilla, Spain, February 2-7 2004.

71

Page 72: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[706] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez. On descriptive complexity of P systems. In Pre-proceedings of the Fifth Workshop on Membrane Computing (WMC5),Milano, Italy, June 2004, pages 245–255, Milano, Italy, June 2004.

[707] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez. Towards a programming language in cellular computing.Technical Report 01/2004, Dept. of Computer Sciences and ArtificialIntelligence, Univ. of Sevilla, 2004.

[708] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez. Towards a programming language in cellular comput-ing. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez,and Fernando Sancho-Caparrini, editors, Second Brainstorming Week onMembrane Computing, Sevilla, Spain, February 2-7 2004, pages 247–257,Sevilla, Spain, February 2-7 2004.

[709] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez. On the degree of parallelism in membrane systems. The-oretical Computer Science, 372(2-3):183–195, 2007.

[710] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, Agustın Riscos-Nunez, and Francisco J. Romero-Campero. P systems with active mem-branes, without polarizations and without dissolution: A characteriza-tion of P. In Unconventional Computation 4th International Conference,UC 2005, Sevilla, Spain, October 3-7, 2005. Proceedings, volume 3699 ofLecture Notes in Computer Science. Springer Berlin / Heidelberg, 2005.

[711] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, Agustın Riscos-Nunez, and Francisco J. Romero-Campero. Computational efficiency ofdissolution rules in membrane systems. International Journal of Com-puter Mathematics, 83(7):593–611, 2006.

[712] Miguel A. Gutierrez-Naranjo, Mario J. Perez-Jimenez, Agustın Riscos-Nunez, and Francisco J. Romero-Campero. How to express tumoursusing membrane systems. Progress in Natural Science, 17(4):449–457,2007.

[713] Miguel A. Gutierrez-Naranjo and Vladimir Rogozhin. Deductivedatabases and P systems. Technical Report 01/2004, Dept. of ComputerSciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[714] Miguel A. Gutierrez-Naranjo and Vladimir Rogozhin. Deductivedatabases and P systems. In Gheorghe Paun, Agustın Riscos-Nunez, Al-varo Romero-Jimenez, and Fernando Sancho-Caparrini, editors, SecondBrainstorming Week on Membrane Computing, Sevilla, Spain, February2-7 2004, pages 258–263, Sevilla, Spain, February 2-7 2004.

72

Page 73: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[715] Miguel Angel Gutierrez-Naranjo, Alberto Leporati, and Claudio Zan-dron. Converting integer numbers from binary to unary notation withP systems. In Proceedings of the ESF Exploratory Workshop on Cel-lular Computing (Complexity Aspects), Sevilla (Spain), January 31st -February 2nd, pages 201–208, 2005.

[716] Miguel Angel Gutierrez-Naranjo, Mario J. Perez-Jimenez, and AgustınRiscos-Nunez. Available Membrane Computing Software, pages 411–438.Springer-Verlag, 2005.

[717] Miguel Angel Gutierrez-Naranjo, Mario J. Perez-Jimenez, and Fran-cisco Jose Romero-Campero. Solving SAT with membrane creation. InCiE2005: New Computational Paradigms, Amsterdam, 2005.

[718] Miguel Angel Gutierrez-Naranjo and Mario Jesus Perez-Jimenez. Psystems with membrane creation and rule input. In Proceedings ofthe ESF Exploratory Workshop on Cellular Computing (Complexity As-pects), Sevilla (Spain), January 31st - February 2nd, pages 209–224,2005.

[719] Miguel-Angel Gutierrez-Naranjo and Mario-Jesus Perez-Jimenez. Frac-tals and P systems. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun,Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors,Fourth Brainstorming Week on Membrane Computing, Sevilla, January30 - February 3, 2006. Volume II, pages 65–86. Fenix Editora, 2006.

[720] Miguel Angel Gutierrez-Naranjo, Mario Jesus Perez-Jimenez, andAgustın Riscos-Nunez. Multidimensional sevilla carpets associated withP systems. In Proceedings of the ESF Exploratory Workshop on Cel-lular Computing (Complexity Aspects), Sevilla (Spain), January 31st -February 2nd, pages 225–236, 2005.

[721] Miguel Angel Gutierrez-Naranjo, Mario Jesus Perez-Jimenez, andAgustın Riscos-Nunez. A simulator for confluent P systems. In Proceed-ings of the Third Brainstorming Week on Membrane Computing, Sevilla(Spain), January 31st - February 4th, pages 169–184, 2005.

[722] Miguel-Angel Gutierrez-Naranjo, Mario-Jesus Perez-Jimenez, andAgustın Riscos-Nunez. An approach to the degree of parallelism in Psystems. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, AgustınRiscos-Nunez, and Francisco Jose Romero-Campero, editors, FourthBrainstorming Week on Membrane Computing, Sevilla, January 30 -February 3, 2006. Volume II, pages 87–104. Fenix Editora, 2006.

[723] Miguel Angel Gutierrez-Naranjo, Mario Jesus Perez-Jimenez, and Fran-cisco Jose Romero-Campero. Simulating avascular tumors with mem-brane systems. In Proceedings of the Third Brainstorming Week on Mem-brane Computing, Sevilla (Spain), January 31st - February 4th, pages185–196, 2005.

73

Page 74: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[724] E. Gutuleac. Descriptive times membrane petri nets for modelling ofparallel computing. In Proc. of ICCCC 2006, Oradea, Romania, June2006, pages 256–261.

[725] Chen Haiming, Tseren-Onolt Ishdorj, and Gheorghe Paun. Computingalong the axon. Progress in Natural Science, 17(4):417–423, 2007.

[726] Tom Head. Aqueous simulations of membrane computations. RomanianJournal of Information Science and Technology, 2001. To appear.

[727] D. Hemalatha, K.S. Dersanambika, K.G. Subramanian, and C. Sri HariNagore. Array-rewriting p systems with conditional communication. Ra-manujan Math. Soc. Lecture Notes Series, (3):155–160, 2007.

[728] S. Hemalatha. A Study on Rewriting P Systems, Splicing Grammar Sys-tems and Picture Array Languages. PhD thesis, University of Chennai,India, India, 2007.

[729] T. Hinze, S. Hayat, T. Lenser, N. Matsumaru, and P. Dittrich. Hill ki-netics meets P systems: A case study on gene regulatory networks ascomputing agents in silico and in vivo. In G. Eleftherakis and Gh. PaunP. Kefalas, editors, Pre-proceedings of Membrane Computing, Interna-tional Workshop - WMC8, pages 363–382, Thessaloniki, Greece, 2007.

[730] T. Hinze, T. Lenser, and P. Dittrich. A protein substructure based psystem for description and analysis of cell signalling networks. In H.J.Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings ofMembrane Computing, International Workshop, WMC7, pages 372–286,Leiden, The Netherlands, 2006.

[731] Thomas Hinze, Raffael Fassler, Thorsten Lenser, Naoki Matsumaru,and Peter Dittrich. Event-driven metamorphoses of P systems. InDavid Wolfe Corne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing: 9th Interna-tional Workshop, volume 5391 of Lecture Notes in Computer Science,pages 231–245, 2009.

[732] Paulien Hogeweg. Multilevel modeling of morphogenesis. In David WolfeCorne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing: 9th International Workshop,volume 5391 of Lecture Notes in Computer Science, pages 29–35, 2009.

[733] Mike Holcombe, Lucy Holcombe, Marian Gheorghe, and N. Talbot. Ahybrid machine model of rice blast fungus magnaporthe grisea. In Proc.Fourth Intern. Workshop on Information Processing in IPCAT 2001,Cells and Tissues, Brussels, August 2001.

[734] Hendrik Jan Hoogeboom. Carriers and counters. P systems with carriersvs. (blind) counter automata. In Masami Ito and Masafumi Toyama,

74

Page 75: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

editors, Developments in Language Theory, 6th International Confer-ence, DLT 2002, Kyoto, Japan, September 18-21, 2002, Revised Pa-pers, volume 2450 of Lecture Notes In Computer Science, pages 140–151.Springer-Verlag Heidelberg, 2003.

[735] Chunyi Huang and Xiaoju Dong. Maximally parallel attribute onP systems: Properties and applications. Progress in Natural Science,18(5):629–632, 2008.

[736] L. Huang, X.-X. He, N. Wang, and Y. Xie. P systems based multi-objective optimization algorithm. In Pre-proceedings of InternationalConference on Bio-Inspired Computing - Theory and Applications, BIC-TA 2006, Membrane Computing Section, pages 113–123, Wuhan, China,September 2006.

[737] L. Huang and N. Wang. A variant of p systems for optimization. Neu-rocomputing, to appear.

[738] L. Huang and N. Wang. An optimization algorithms inspired by mem-brane computing. In L. Jiao, editor, Proceedings ICNC, volume 4222 ofLecture Notes In Computer Science, pages 49–55. Springer, 2006.

[739] L. Huang and N. Wang. P systems based multi-objective optimizationalgorithm. In Proc. Bio-Inspired Computing – Theory and ApplicationsConf., BIC-TA 2006, Wuhan, China, September 2006, Membrane Com-puting Section., 2006.

[740] Liang Huang and Il Hong Suh. Controller design for a marine dieselengine using membrane computing. International Journal of InnovativeComputing, Information and Control, 5(4):899–912, 2009.

[741] Liang Huang, Lei Sun, Ning Wang, and Xiaoming Jin. Multiobjective op-timization of simulated moving bed by tissue P system. Chinese Journalof Chemical Engineering, 15(5):683–690, 2007.

[742] O. Ibarra and S. Woodworth. On symport/antiport p systems with oneor two symbols. In in G. Ciobanu, Gh. Paun, Pre-Proc. of First Inter-national Workshop on Theory and Application of P Systems, Timisoara,Romania, September 26-27, pages 75–82, 2005.

[743] O.H. Ibarra. Some recent results concerning deterministic p systems.In Pre-Proc. of the sixth Workshop on Membrane Computing, WMC6,Vienna, Austria, pages 24–25, 2005.

[744] O.H. Ibarra and A. Paun. Counting time in computing with cells. InDNA11, London, Ontario, Canada, 2005.

[745] O.H. Ibarra, A. Paun, Gheorghe Paun, A. Rodriguez-Paton, P. Sosik, andS.Woodworth. Normal forms for spiking neural p systems. Submitted,2006.

75

Page 76: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[746] O.H. Ibarra and Gh. Paun. Membrane computing: A general view. InAnnals of European Academy of Sciences, to appear, 2008.

[747] O.H. Ibarra and Gheorghe Paun. Characterizations of context-sensitivelanguages and other language classes in terms of symport/antiport psystems. Submitted, 2005.

[748] O.H. Ibarra and S. Woodworth. On bounded symport/antiport p sys-tems. In DNA11, London, Ontario, Canada, 2005.

[749] O.H. Ibarra and S. Woodworth. Characterizations of some restrictedspiking neural p systems. In H.J. Hoogeboom, Gh. Paun, and G. Rozen-berg, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop, WMC7, pages 387–396, Leiden, The Netherlands, 2006.

[750] O.H. Ibarra and S. Woodworth. Characterizations of some restrictedspiking neural p systems. In H.J. Hoogeboom, Gh. Paun, and G. Rozen-berg, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop, WMC7, pages 387–396, Leiden, The Netherlands, 2006.

[751] O.H. Ibarra and H.-C. Yen. On deterministic catalytic p systems. Sub-mitted, 2005.

[752] Oscar H. Ibarra. The number of membranes matters. In Artiom Alhazov,Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedings of theWorkshop on Membrane Computing, pages 273–285, Tarragona, July 17-22 2003.

[753] Oscar H. Ibarra. The number of membranes matters. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing, International Workshop, WMC2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, volume 2933of Lecture Notes in Computer Science, pages 218–231. Springer, July2003.

[754] Oscar H. Ibarra. On determinism versus nondeterminism in P Systems.Submitted, 2004.

[755] Oscar H. Ibarra. On membrane hierarchy in P systems. TheoreticalComputer Science, 2004. In press.

[756] Oscar H. Ibarra. On the computational complexity of membrane systems.Theoretical Computer Science, 320(1):89–109, June 2004.

[757] Oscar H. Ibarra. P systems: Some recent results and research problems.In Pre-Proc. Unconventional Programming Paradigms, UPP04, Le MontSaint-Michel, pages 47–54, September 2004.

76

Page 77: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[758] Oscar H. Ibarra, Zhe Dang, and Omer Egecioglu. Catalytic P systems,semilinear sets, and vector addition systems. Theoretical Computer Sci-ence, 312(2-3):379–399, January 2004. A short version of this paper(without proofs) was presented at the 28th International Symposiumon Mathematical Foundations of Computer Science (MFCS 2003). Thisresearch was supported in part by NSF Grants IIS-0101134 and CCR02-08595.

[759] Oscar H. Ibarra, Zhe Dang, Omer Egecioglu, and Gaurav Saxena. Char-acterizations of catalytic membrane computing systems (extended ab-stract). In Peter Vojta Branislav Rovan, editor, Mathematical Founda-tions of Computer Science 2003: 28th International Symposium, MFCS2003, Bratislava, Slovakia, August 25-29, 2003, Proceedings, volume 2747of Lecture Notes In Computer Science, pages 480–489. Springer-VerlagHeidelberg, December 2003.

[760] Oscar-H. Ibarra, Andrei Paun, Gheorghe Paun, Alfonso Rodrıguez-Paton, Petr Sosik, and Sara Woodworth. Normal forms for spikingneural P systems. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun,Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors,Fourth Brainstorming Week on Membrane Computing, Sevilla, January30 - February 3, 2006. Volume II, pages 105–136. Fenix Editora, 2006.

[761] Oscar H. Ibarra, Andrei Paun, Gheorghe Paun, Alfonso Rodrıguez-Paton, Petr Sosık, and Sara Woodworth. Normal forms for spiking neuralP systems. Theoretical Computer Science, 372(2-3):196–217, 2007.

[762] Oscar H. Ibarra, Andrei Paun, and Alfonso Rodrıguez-Paton. Sequen-tiality induced by spike numbers in SNP systems. In Proceedings of the14th International Meeting on DNA Computing, pages 36–46, 2008.

[763] Oscar H. Ibarra and Sara Woodworth. Characterizing regular languagesby spiking neural P systems. International Journal of Foundations ofComputer Science, 18(6):1247–1256, 2007.

[764] Oscar H. Ibarra and Sara Woodworth. Spiking neural P systems: Somecharacterizations. In Erzsebet Csuhaj-Varju and Zoltan Esik, editors,Fundamentals of Computation Theory, 16th International Symposium,volume 4639 of Lecture Notes in Computer Science, pages 23–37, 2007.

[765] Oscar H. Ibarra, H.-C. Yen, and Zhe Dang. The power of maximalparallelism in P Systems. Submitted, 2004. To appear in Proceedings ofDLT’04 Lecture Notes in Computer Science, Springer. 2004.

[766] J. Inouye. Fibonacci sequence generation using membrane computing.In The 2004 Intern. Multiconference in Computer Science and ComputerEngineering, Las Vegas, pages 384–389, 2004.

77

Page 78: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[767] J. Inouye. Quantum simulation using membrane computing. In The 2004Intern. Multiconference in Computer Science and Computer Engineering,Las Vegas, pages 403–409, 2004.

[768] J. Inouye and P.P. Dey. Membranous filter sort. WSEA Transactions onBiology and Medicine, 1(4), October 2004. ISSN: 1109-9518.

[769] M. Ionescu and T.O. Ishdorj. Boolean circuits and a dna algorithm inmembrane computing. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 410–438, 2005.

[770] M. Ionescu, A. Paun, Gh. Paun, and M.J. Perez-Jimenez. Computingwith spiking neural p systems: Traces and small universal systems. InC. Mao, Y. Yokomori, and B.-T. Zhang, editors, Proceedings DNA12,pages 32–42, Seul, June 2006.

[771] M. Ionescu, Gheorghe Paun, and T. Yokomori. Spiking neural-like psystems. Submitted, 2005.

[772] M. Ionescu and D. Sburlan. P systems with adjoining controlled com-munication rules. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, and A. Nunez, editors, Proceedings of the Fifth BrainstormingWeek on Membrane Computing, pages 199–212, Sevilla (Spain), January29th - February 2 2007.

[773] M. Ionescu and D. Sburlan. Several applications of spiking neural psystems. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez,and A. Nunez, editors, Proceedings of the Fifth Brainstorming Week onMembrane Computing, pages 213–226, Sevilla (Spain), January 29th -February 2 2007.

[774] M. Ionescu and D. Sburlan. Some applications of spiking neural Psystems. In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Computing, International Workshop - WMC8,pages 383–394, Thessaloniki, Greece, 2007.

[775] Mihai Ionescu. Membrane Computing. Traces, Neural Inspired ModelsControls. PhD thesis, Universitat Rovira i Virgili, Tarragona, Spain,2008.

[776] Mihai Ionescu, Carlos Martın-Vide, Andrei Paun, and Gheorghe Paun.Unexpected universality results for three classes of P systems with sym-port/antiport. In M. Hagiya and A. Ohuchi, editors, DNA Computing:8th International Workshop on DNA-Based Computers, DNA8 Sapporo,Japan, June 10-13, 2002. Revised Papers, volume 2568 of Lecture NotesIn Computer Science, pages 281–290. Springer-Verlag Heidelberg, 2003.

[777] Mihai Ionescu, Carlos Martın-Vide, Andrei Paun, and Gheorghe Paun.Unexpected universality results for three classes of P systems with sym-port/antiport. Natural Computing, 2(4):337–348, December 2003.

78

Page 79: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[778] Mihai Ionescu, Carlos Martın-Vide, and Gheorghe Paun. P systems withsymport/antiport rules: The traces of objects. In Pre-Proceedings ofSecond Workshop on Membrane Computing, Curtea de Arges, Romania,August 2002.

[779] Mihai Ionescu and Dragos Sburlan. P systems with adjoining controlledcommunication rules. In Erzsebet Csuhaj-Varju and Zoltan Esik, editors,Fundamentals of Computation Theory, 16th International Symposium,volume 4639 of Lecture Notes in Computer Science, pages 353–364, 2007.

[780] Mihai Ionescu and Dragos Sburlan. Some applications of spiking neuralP systems. In George Eleftherakis, Petros Kefalas, and Gheorghe Paun,editors, Proceedings of the Eighth Workshop on Membrane Computing,pages 383–394, 2007.

[781] Mihai Ionescu and Dragos Sburlan. Some applications of spiking neuralP systems. Computing and Informatics, 27(3+):515–528, 2008.

[782] Mihai Ionescu and Dragos Sburlan. On P systems with promot-ers/inhibitors. Technical Report 01/2004, Dept. of Computer Sciencesand Artificial Intelligence, Univ. of Sevilla, 2004.

[783] Mihai Ionescu and Dragos Sburlan. On P systems with promot-ers/inhibitors. In Gheorghe Paun, Agustın Riscos-Nunez, AlvaroRomero-Jimenez, and Fernando Sancho-Caparrini, editors, SecondBrainstorming Week on Membrane Computing, Sevilla, Spain, February2-7 2004, pages 264–280, Sevilla, Spain, February 2-7 2004.

[784] Mihai Ionescu and Dragos Sburlan. On P systems with promot-ers/inhibitors. Journal of Universal Computer Science, 10(5):581–599,May 2004.

[785] Florentin Ipate and Marian Gheorghe. Testing non-deterministic streamX-machine models and P systems. In Gabriel Ciobanu, editor, SecondInternational Meeting on Membrane Computing and Biologically InspiredProcess Calculi, pages 117–130, 2008.

[786] T.-O. Ishdorj. Minimal parallelism for polarizationless p systems. Sub-mitted, 2006.

[787] T. O. Ishdorj. Membrane Computing, Neural Inspiration, Gene Assemblyin Ciliates. PhD thesis, Universidad de Sevilla, Spain, Sevilla, Spain,2007.

[788] Tseren Onolt Ishdorj and Mihai Ionescu. Replicative-distribution rulesin P Systems with active membranes. Submitted, 2004. First Interna-tional Colloquium on THEORETICAL ASPECTS OF COMPUTINGGuiyang, China 20 - 24 September 2004.

79

Page 80: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[789] Tseren-Onolt Ishdorj and Alberto Leporati. Uniform solutions to SATand 3-SAT by spiking neural P, systems with pre-computed resources.Natural Computing, 7(4):519–534, 2008.

[790] Tseren-Onolt Ishdorj, Alberto Leporati, Linqiang Pan, Xiangxiang Zeng,and Xingyi Zhang. Deterministic solutions to qsat and q3sat by spikingneural p systems with pre-computed resources. Theoretical ComputerScience.

[791] Masami Ito, Carlos Martın-Vide, and Gheorghe Paun. A characterizationof Parikh sets of ET0L languages in terms of P systems, pages 239–254.World Scientific, Singapore, 2001.

[792] John Jack, Andrei Paun, and Alfonso Rodrıguez-Paton. Effects of HIV-1proteins on the Fas-mediated apoptotic signaling cascade: A computa-tional study of latent CD4+, T cell activation. In David Wolfe Corne,Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salo-maa, editors, Membrane Computing: 9th International Workshop, vol-ume 5391 of Lecture Notes in Computer Science, pages 246–259, 2009.

[793] John Jack, Alfonso Rodrıguez-Paton, Oscar H. Ibarra, and Andrei Paun.Discrete nondeterministic modeling of the Fas pathway. InternationalJournal of Foundations of Computer Science, 19(5):1147–1162, 2008.

[794] Duncan Jackson, Marian Gheorghe, Mike Holcombe, and FrancescoBernardini. An agent-based behavioural model of monomorium pharao-nis colonies. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Comput-ing, International Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notes in ComputerScience, pages 232–239. Springer, July 2003.

[795] Sungchul Ji. The Bhopalator: An information/energy dual model of theliving cell. Technical Report 17/01, Rovira i Virgili University, Tarrag-ona, Spain, 2001. Technical Report 17/01 of Research Group on Mathe-matical Linguistics.

[796] Sungchul Ji. The Bhopalator: An information/energy dual model of theliving cell. In Pre-Proceedings of Workshop on Membrane Computing,Curtea de Arges, Romania, August 2001.

[797] Sungchul Ji. The Bhopalator: An information/energy dual model ofthe living cell. Fundamenta Informaticae, 49(1-3):147–165, January2002. Special Issue: Membrane Computing (WMC-CdeA2001) GuestEditor(s): Carlos Martın-Vide, Gheorghe Paun.

[798] Sungchul Ji. Towards a unified theory of computing, mind, and signs.Technical Report 26, Rovira i Virgili University, 2003.

80

Page 81: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[799] Sungchul Ji. Towards a unified theory of computing, mind, and signs.In Matteo Cavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors,Brainstorming Week on Membrane Computing, Tarragona, February 5-11 2003, pages 189–197, Tarragona, February 5-11 2003.

[800] Sungchul Ji and Gabriel Ciobanu. Towards the modeling of cell com-munication and computation using the shape algebra of biopolymers.psystems.disco.unimib.it, 2002. psystems.disco.unimib.it.

[801] Natasa Jonoska and Maurice Margenstern. Tree operations in P systemsand λ-calculus. Fundamenta Informaticae, 59(1):67–90, 2004.

[802] Lila Kari, Carlos Martın-Vide, and Andrei Paun. On the Universality ofP systems with Minimal Symport/Antiport Rules, volume 2950 of LectureNotes in Computer Science, pages 254–265. Springer, 2004.

[803] Lila Kari and Grzegorz Rozenberg. The many facets of natural comput-ing. Communications of the ACM, 51(10):72–83, 2008.

[804] Petros Kefalas, G. Eleftherakis, Mike Holcombe, and Marian Gheorghe.Simulation and verification of P systems through communicating X-machines. BioSystems, 70(2):135–148, July 2003.

[805] Petros Kefalas, Ioanna Stamatopoulou, George Eleftherakis, and Mar-ian Gheorghe. Transforming state-based models to P systems modelsin practice. In David Wolfe Corne, Pierluigi Frisco, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Computing:9th International Workshop, volume 5391 of Lecture Notes in ComputerScience, pages 260–273, 2009.

[806] Petros Kefalas, Ioanna Stamatopoulou, and Marian Gheorghe. Principlesof transforming communicating X-machines to population P systems.In Gyorgy Vaszil, editor, Proceedings of the International Workshop onAutomata for Cellular and Molecular Computing, pages 76–89, 2007.

[807] J. Kelemen. Plain talk about language-theoretic models of multi-agentsystems. In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Computing, International Workshop - WMC8,pages 395–404, Thessaloniki, Greece, 2007.

[808] Jozef Kelemen. Some questions inspired by (membrane computing moti-vated) language-theoretic models hardware. Computing and Informatics,27(3+):571–580, 2008.

[809] Jozef Kelemen, Alica Kelemenova, and Gheorghe Paun. P colonies.In Workshop on Artificial Chemistry, ALIFE9, Boston, Massachusetts,USA, September 12-15 2004.

[810] C. Kevorchian. An algebraic topology approach of membrane computing.In Proc. AIDC’2003, Craiova, Romania., 2003.

81

Page 82: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[811] Markus Kirkilionis, Mirela Domijan, Martin Eigel, Erwin George, MikeLi, and Luca Sbano. A definition of cellular interface problems. InDavid Wolfe Corne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing: 9th Interna-tional Workshop, volume 5391 of Lecture Notes in Computer Science,pages 36–62, 2009.

[812] Markus Kirkilionis, Mirela Domijan, Martin Eigel, Erwin George, MikeLi, and Luca Sbano. A definition of cellular interface problems. InDavid Wolfe Corne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing: 9th Interna-tional Workshop, volume 5391 of Lecture Notes in Computer Science,pages 36–62, 2009.

[813] J. Kleijn and M. Koutny. Synchrony and asynchrony in membrane sys-tems. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Membrane Computing, International Workshop, WMC7,pages 21–39, Leiden, The Netherlands, 2006.

[814] J. Kleijn, M. Koutny, and G. Rozenberg. Towards a petri net semanticsfor membrane systems. In Pre-Proc. of the sixth Workshop on MembraneComputing, WMC6, Vienna, Austria, pages 439–460, 2005.

[815] J. Kleijn, M. Koutny, and G. Rozenberg. Process semantics for membranesystems. Submitted, 2006.

[816] Jetty Kleijn and Maciej Koutny. Processes of membrane systems withpromoters and inhibitors. Theoretical Computer Science, 404(1-2):112–126, 2008.

[817] Jetty Kleijn and Maciej Koutny. A Petri net model for membrane systemswith dynamic structure. Natural Computing, to appear.

[818] Marian Kogler. Controlled use of partitionings of rule sets in (tissue)P systems. Master’s thesis, Faculty of Computer Science. TU Vienna,Vienna, Austria, September 2009.

[819] W. Korczynski. Paun’s systems and accounting. In Pre-Proc. of the sixthWorkshop on Membrane Computing, WMC6, Vienna, Austria, pages461–464, 2005.

[820] W. Korczynski. Paun’s systems as models of economic systems. In Proc.Bio-Inspired Computing – Theory and Applications Conf., BIC-TA 2006,Wuhan, China, September 2006, Membrane Computing Section., 2006.

[821] W. Korczynski. Paun’s systems as models of economic systems. InPre-proceedings of International Conference on Bio-Inspired Computing -Theory and Applications, BIC-TA 2006, Membrane Computing Section,pages 124–130, Wuhan, China, September 2006.

82

Page 83: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[822] Waldemar Korczynski. P Systems as a tool to deal with concurrency inaccounting. Submitted, 2004.

[823] Waldemar Korczynski. Transformacje systemow Pauna jako modelprzeksztalcen systemowych. Technical Report W2/2003, WSU Kielce,2004. Raport z Badan Grantu W2/2003.

[824] Waldemar Korczynski. Paun’s systems as models of economic systems.Progress in Natural Science, 17(4):466–470, 2007.

[825] Waldemar Korczynski, G. Wawrzola, and S. Wawrzola. On a recon-struction problem for membrane systems. In Proceedings of the SecondConference on Tools and Methods of Data Transformation. WSU Kielce,2004.

[826] W. Kowczynski. On a model of economic systems. In Proceedings of theSecond Conference on Tools and Methods of Data Transformation. WSUKielce, 2004.

[827] Alexander Krassovitskiy, Yurii Rogozhin, and Sergey Verlan. One-sidedinsertion and deletion: traditional and P systems case. In ErzsebetCsuhaj-Varju, Rudolf Freund, Marion Oswald, and Kai Salomaa, ed-itors, International Workshop on Computing with Biomolecules, pages51–63, 2008.

[828] S. Krishna. Combining brane calculus and membrane computing. Sub-mitted, 2006.

[829] Shankara N. Krishna. Universality results for P systems based on branecalculi operations. Theoretical Computer Science, 371(1-2):83–105, 2007.

[830] Shankara-Narayanan Krishna. P systems with symport/antiport: Thetraces of RBCs. In Giancarlo Mauri, Gheorghe Paun, Mario J. Perez-Jimenez, Grzegorz Rozenberg, and Arto Salomaa, editors, MembraneComputing. International Workshop WMC5, Milano, Italy, 2004, LNCS,Springer, 2005 (TO APPEAR).

[831] Shankara Narayanan Krishna. Computing with simple P systems. Tech-nical Report 140, University of Auckland, 2000.

[832] Shankara-Narayanan Krishna. Computing with simple P systems. InPre-Proceedings Workshop on Multiset Processing, Curtea de Arges, Ro-mania, August 2000.

[833] Shankara Narayanan Krishna. Infinite hierarchies on some variants of PSystems. Submitted, 2002.

[834] Shankara-Narayanan Krishna. Languages of P Systems. Computabilityand Complexity. PhD thesis, Indian Institute of Technology, Madras,India, 2002.

83

Page 84: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[835] Shankara-Narayanan Krishna. Universality with RBC-like objects.In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 256–267, Milano, Italy, June2004.

[836] Shankara Narayanan Krishna. On the efficiency of a variant of P sys-tems with mobile membranes. In Proceedings of the ESF ExploratoryWorkshop on Cellular Computing (Complexity Aspects), Sevilla (Spain),January 31st - February 2nd, pages 237–246, 2005.

[837] Shankara Narayanan Krishna. The power of mobility: four membranessuffice. In CiE2005: New Computational Paradigms, Amsterdam, 2005.

[838] Shankara Narayanan Krishna. On the computational power of flip-flopproteins on membranes. In S. Barry Cooper, Benedikt Lowe, and An-drea Sorbi, editors, Proceedings of the 3rd conference on Computabilityin Europe: Computation and Logic in the Real World, volume 4497 ofLecture Notes in Computer Science, pages 695–704, 2007.

[839] Shankara Narayanan Krishna. The expressiveness of concentration con-trolled P systems. In Cristian S. Calude, Jose Felix Costa, Rudolf Freund,Marion Oswald, and Grzegorz Rozenberg, editors, Proceedings of the 7thinternational conference on Unconventional Computing, volume 5204 ofLecture Notes in Computer Science, pages 96–110, 2008.

[840] Shankara Narayanan Krishna and Gabriel Ciobanu. On the compu-tational power of enhanced mobile membranes. In Arnold Beckmann,Costas Dimitracopoulos, and Benedikt Lowe, editors, Proceedings of the4th conference on Computability in Europe: Logic and Theory of Algo-rithms, volume 5028 of Lecture Notes in Computer Science, pages 326–335, 2008.

[841] Shankara Narayanan Krishna, Kamala Krithivasan, and RaghavanRama. P systems with picture objects. Acta Cybernetica, 15(1):53–74,2001.

[842] Shankara Narayanan Krishna, K. Lakshmanan, and Raghavan Rama.Hybrid P systems. Romanian Journal of Information Science and Tech-nology, 4(1-2):111–123, 2001.

[843] Shankara Narayanan Krishna, K. Lakshmanan, and Raghavan Rama. Onthe power of P systems with contextual rules. Technical Report 17/01,Rovira i Virgili University, Tarragona, Spain, 2001. Technical Report17/01 of Research Group on Mathematical Linguistics.

[844] Shankara Narayanan Krishna, K. Lakshmanan, and Raghavan Rama. Onthe power of P systems with contextual rules. Fundamenta Informati-cae, 49(1-3):167–178, January 2002. Special Issue: Membrane Comput-ing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, GheorghePaun.

84

Page 85: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[845] Shankara-Narayanan Krishna, Kuppuswamy Lakshmanan, and Ragha-van Rama. On the power of P systems with contextual rules. In Pre-Proceedings of Workshop on Membrane Computing, Curtea de Arges,Romania, August 2001.

[846] Shankara-Narayanan Krishna, Kuppuswamy Lakshmanan, and Ragha-van Rama. Tissue P systems with contextual and rewriting rules. InPre-Proceedings of Second Workshop on Membrane Computing, Curteade Arges, Romania, August 2002.

[847] Shankara-Narayanan Krishna, Kuppuswamy Lakshmanan, and Ragha-van Rama. Tissue P systems with contextual and rewriting rules. InGheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Claudio Zan-dron, editors, Membrane Computing: International Workshop, WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002. RevisedPapers., volume 2597 of Lecture Notes in Computer Science, pages 339–351, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[848] Shankara Narayanan Krishna and Andrei Paun. Some universality resultson evolution-communication P systems. Technical Report 26, Rovira iVirgili University, 2003.

[849] Shankara-Narayanan Krishna and Andrei Paun. Some universality re-sults on evolution-communication P systems. In Matteo Cavaliere, Car-los Martın-Vide, and Gheorghe Paun, editors, Brainstorming Week onMembrane Computing, Tarragona, February 5-11 2003, pages 207–215,Tarragona, February 5-11 2003.

[850] Shankara Narayanan Krishna and Andrei Paun. Three universality re-sults on P systems. Technical Report 26, Rovira i Virgili University,2003.

[851] Shankara-Narayanan Krishna and Andrei Paun. Three universality re-sults on P systems. In Matteo Cavaliere, Carlos Martın-Vide, and Gheo-rghe Paun, editors, Brainstorming Week on Membrane Computing, Tar-ragona, February 5-11 2003, pages 198–206, Tarragona, February 5-112003.

[852] Shankara Narayanan Krishna and Andrei Paun. Results on catalyticand evolution-communication P systems. New Generation Computing,22(4):377–394, August 2004.

[853] Shankara Narayanan Krishna and Gheorghe Paun. P Systems with mo-bile membranes. Submitted, 2004.

[854] Shankara Narayanan Krishna and Raghavan Rama. A variant of P sys-tems with active membranes: Solving NP-Complete problems. RomanianJournal of Information Science and Technology, 2(4):357–367, 1999.

85

Page 86: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[855] Shankara Narayanan Krishna and Raghavan Rama. On simple P Systemswith external output. Submitted, 2000.

[856] Shankara Narayanan Krishna and Raghavan Rama. On the power of Psystems based on sequential/parallel rewriting. International Journal ofComputer Mathematics, 77(1-2):1–14, 2000.

[857] Shankara-Narayanan Krishna and Raghavan Rama. Insertion-deletion Psystems. In Natasha Jonoska and N.C. Seeman, editors, Proc. 7th Intern.Meeting on DNA Based Computers, pages 350–359, Tampa, Florida,USA, 2001.

[858] Shankara Narayanan Krishna and Raghavan Rama. A note on parallelrewriting in P systems. Bulletin of the EATCS, (73):147–151, February2001.

[859] Shankara Narayanan Krishna and Raghavan Rama. P systems with repli-cated rewriting. Journal of Automata, Languages and Combinatorics,6(3):345–350, 2001.

[860] Shankara Narayanan Krishna and Raghavan Rama. Time-varying andnull parallel P Systems. No aparece, 2001. No aparece.

[861] Shankara Narayanan Krishna and Raghavan Rama. On the power of tis-sue P systems working in minimal mode. In Cristian Calude, Michael J.Dinneen, and Ferdinand Peper, editors, Unconventional Models of Com-putation: Third International Conference, UMC 2002, Kobe, Japan,October 15-19, 2002. Proceedings, volume 2509 of Lecture Notes InComputer Science, pages 208–219, London, UK, October 15–19 2002.Springer-Verlag Heidelberg.

[862] Shankara Narayanan Krishna and Raghavan Rama. Breaking DES usingP systems. Theoretical Computer Science, 299(1-3):495–508, April 2003.

[863] Shankara Narayanan Krishna, Raghavan Rama, and H. Ramesh. Furtherresults on contextual/rewriting P systems. Fundamenta Informaticae,2005. To appear.

[864] S.N. Krishna. Combining brane calculus and membrane computing. InPre-proceedings of International Conference on Bio-Inspired Computing -Theory and Applications, BIC-TA 2006, Membrane Computing Section,pages 131–143, Wuhan, China, September 2006.

[865] S.N. Krishna. Combining brane calculus and membrane computing. InProc. Bio-Inspired Computing – Theory and Applications Conf., BIC-TA2006, Wuhan, China, September 2006, Membrane Computing Section.,2006.

[866] S.N. Krishna. Universality results for a brane calculus. Theoretical Com-puter Science, 2006. ?

86

Page 87: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[867] S.N. Krishna. On the efficiency of a variant of p systems with mobilemembranes. Ramanujan Math. Soc. Lecture Notes Series, (3):171–178,2007.

[868] S.N. Krishna and R. Rama. Towards reducing parallelism in P systems.World Scientific, Singapore, 2006.

[869] S.N. Krishna and R. Rama. An infinite hierarchy for some variants of psystems. Ramanujan Math. Soc. Lecture Notes Series, (3):179–185, 2007.

[870] K. Krithivasan. A glimpse of membrane computing. Ramanujan Math.Soc. Lecture Notes Series, (3):49–61, 2007.

[871] Kamala Krithivasan. P automata with tapes. Technical Report 26,Rovira i Virgili University, 2003.

[872] Kamala Krithivasan. P Automata with tapes. In Matteo Cavaliere,Carlos Martın-Vide, and Gheorghe Paun, editors, Brainstorming Weekon Membrane Computing, Tarragona, February 5-11 2003, pages 216–225, Tarragona, February 5-11 2003.

[873] Kamala Krithivasan and Mutyam Madhu. Contextual P systems. Funda-menta Informaticae, 49(1-3):179–189, January 2002. Special Issue: Mem-brane Computing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, Gheorghe Paun.

[874] Kamala Krithivasan and Sandeep V. Varma. On minimising finite stateP automata. Bulletin of the EATCS, 80:168–173, July 2003.

[875] Manfred Kudlek, Carlos Martın-Vide, and Gheorghe Paun. Toward FMT(Formal Macroset Theory). Technical Report 140, University of Auck-land, 2000.

[876] Manfred Kudlek, Carlos Martın-Vide, and Gheorghe Paun. Toward FMT(formal macroset theory). In Pre-Proceedings Workshop on Multiset Pro-cessing, Curtea de Arges, Romania, August 2000.

[877] Manfred Kudlek, Carlos Martın-Vide, and Gheorghe Paun. Toward aformal macroset theory. In Cristian Calude, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Multiset Processing: Mathemati-cal, Computer Science, and Molecular Computing Points of View, volume2235 of Lecture Notes in Computer Science, pages 123–134. Springer-Verlag, 2001.

[878] Manfred Kudlek and Victor Mitrana. Closure properties of multisetlanguage families. Fundamenta Informaticae, 49(1-3):191–203, January2002. Special Issue: Membrane Computing (WMC-CdeA2001) GuestEditor(s): Carlos Martın-Vide, Gheorghe Paun.

87

Page 88: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[879] Manfred Kudlek and Victor Mitrana. Some considerations on a multisetmodel for membrane computing. In Pre-Proceedings of Second Workshopon Membrane Computing, Curtea de Arges, Romania, August 2002.

[880] Manfred Kudlek and Victor Mitrana. Considerations on a multiset modelfor membrane computing. In Gheorghe Paun, Grzegorz Rozenberg, ArtoSalomaa, and Claudio Zandron, editors, Membrane Computing: Interna-tional Workshop, WMC-CdeA 2002, Curtea de Arges, Romania, August19-23, 2002. Revised Papers., volume 2597 of Lecture Notes in ComputerScience, pages 352–359, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[881] K. Lakshmanan. Computational universality and solving NP completeproblems using insertion deletion tissue P Systems. Submitted, 2003.

[882] K. Lakshmanan and R. Rama. The computational efficiency of insertiondeletion tissue P systems. World Scientific, Singapore, 2006.

[883] Kuppuswamy Lakshmanan and Raghavan Rama. On the power of tissueP systems with insertion and deletion rules. In Artiom Alhazov, CarlosMartın-Vide, and Gheorghe Paun, editors, Preproceedings of the Work-shop on Membrane Computing, pages 304–318, Tarragona, July 17-222003.

[884] L. Lakshmanan. On the Crossroads of P Systems and Contextual Gram-mars: Variants, Computability Complexity and Efficiency. PhD thesis,Dept. of Mathematics, Indian Institute of Technology, Madras, India,2004.

[885] L. Ledesma, D. Manrique, and A. Rodriguez-Paton. A tissue p systemand a dna microfluidic device for solving the shortest common superstringproblem. Soft Computing, 9(9):679–685, September 2005.

[886] Lucas Ledesma, Daniel Manrique, Alfonso Rodrıguez-Paton, and AndresSilva. A tissue P system and a DNA microfluidic device for solving theshortest common superstring problem. Technical Report 01/2004, Dept.of Computer Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[887] Lucas Ledesma, Daniel Manrique, Alfonso Rodrıguez-Paton, and AndresSilva. A tissue P system and a DNA microfluidic device for solvingthe shortest common superstring problem. In Gheorghe Paun, AgustınRiscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini,editors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 281–291, Sevilla, Spain, February 2-72004.

[888] Leporati and D. Pagani. A membrane algorithm for the min storageproblem. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Membrane Computing, International Workshop, WMC7,pages 397–416, Leiden, The Netherlands, 2006.

88

Page 89: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[889] A. Leporati. Quantum (UREM) P systems: Background, definition andcomputational power. In G. Eleftherakis and Gh. Paun P. Kefalas, edi-tors, Pre-proceedings of Membrane Computing, International Workshop- WMC8, pages 33–56, Thessaloniki, Greece, 2007.

[890] A. Leporati, G. Mauri, and C. Zandron. Quantum sequential p sys-tems with unit rules and energy assigned to membranes. In Pre-Proc. ofthe sixth Workshop on Membrane Computing, WMC6, Vienna, Austria,pages 465–484, 2005.

[891] A. Leporati, D. Pescini, and C. Zandron. Quantum energy-based P sys-tems. In First brainstorming Workshop on Uncertainty in MembraneComputing, Palma de Mallorca, Spain, November 2004, 2004.

[892] A. Leporati, C. Zandron, C. Ferretti, and G. Mauri. On the computa-tional power of spiking neural p systems. In M.A. Gutierrez-Naranjo, Gh.Paun, A. Romero-Jimenez, and A. Riscos-Nunez, editors, Proceedings ofthe Fifth Brainstorming Week on Membrane Computing, pages 227–246,Sevilla (Spain), January 29th - February 2 2007.

[893] A. Leporati, C. Zandron, C. Ferretti, and G. Mauri. Solving numericalNP-complete problems with spiking neural P systems. In G. Eleftherakisand Gh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Com-puting, International Workshop - WMC8, pages 405–424, Thessaloniki,Greece, 2007.

[894] A. Leporati, C. Zandron, and G. Mauri. Fundamenta Informaticae, (4).

[895] A. Leporati, C. Zandron, and G. Mauri. Solving the factorization prob-lem with p systems. In Pre-proceedings of International Conference onBio-Inspired Computing - Theory and Applications, BIC-TA 2006, Mem-brane Computing Section, pages 144–153, Wuhan, China, September2006.

[896] A. Leporati, C. Zandron, and G. Mauri. Solving the factorization prob-lem with p systems. In Proc. Bio-Inspired Computing – Theory and Ap-plications Conf., BIC-TA 2006, Wuhan, China, September 2006, Mem-brane Computing Section., 2006.

[897] Alberto Leporati, Daniela Besozzi, Paolo Cazzaniga, Claudio Ferretti,and Dario Pescini. Computing with energy and chemical reactions. Nat-ural Computing, to appear.

[898] Alberto Leporati and Sara Felloni. Three quantum algorithms to solve3-SAT. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, AgustınRiscos-Nunez, and Francisco Jose Romero-Campero, editors, FourthBrainstorming Week on Membrane Computing, Sevilla, January 30 -February 3, 2006. Volume II, pages 137–160. Fenix Editora, 2006.

89

Page 90: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[899] Alberto Leporati and Sara Felloni. Three “quantum” algorithms to solve3-SAT. Theoretical Computer Science, 372(2-3):218–241, 2007.

[900] Alberto Leporati and Miguel A. Gutierrez-Naranjo. Solving subset sumby spiking neural P systems with pre-computed resources. FundamentaInformaticae, 87(1):61–77, 2008.

[901] Alberto Leporati and Claudio Zandron. A family of P systems whichsolve 3-SAT. In Proceedings of the ESF Exploratory Workshop on Cel-lular Computing (Complexity Aspects), Sevilla (Spain), January 31st -February 2nd, pages 247–256, 2005.

[902] Alberto Leporati, Claudio Zandron, and Miguel A. Gutierrez-Naranjo. Psystems with input in binary form. International Journal of Foundationsof Computer Science, 17(1):127–146, February 2006.

[903] Alberto Leporati, Claudio Zandron, and Giancarlo Mauri. Conservativecomputations in energy-based P systems. In Pre-proceedings of the FifthWorkshop on Membrane Computing (WMC5), Milano, Italy, June 2004,pages 268–283, Milano, Italy, June 2004.

[904] Alberto Leporati, Claudio Zandron, and Giancarlo Mauri. Simulating theFredkin Gate with energy–based P systems. Technical Report 01/2004,Dept. of Computer Sciences and Artificial Intelligence, Univ. of Sevilla,2004.

[905] Alberto Leporati, Claudio Zandron, and Giancarlo Mauri. Simulating theFredkin gate with energy–based P systems. In Gheorghe Paun, AgustınRiscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini,editors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 292–308, Sevilla, Spain, February 2-72004.

[906] Alberto Leporati, Claudio Zandron, and Giancarlo Mauri. Simulatingthe Fredkin Gate with energy-based P systems. Journal of UniversalComputer Science, 10(5):600–619, May 2004.

[907] Alberto Leporati, Claudio Zandron, and Giancarlo Mauri. Solving thefactorization problem with P systems. Progress in Natural Science,17(4):471–478, 2007.

[908] Alberto Leporati, Claudio Zandron, and Giancarlo Mauri. How redun-dant is your universal computation device? In David Wolfe Corne, Pier-luigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, ed-itors, Membrane Computing: 9th International Workshop, volume 5391of Lecture Notes in Computer Science, pages 274–291, 2009.

[909] C. Li, Z. Dang, O. Ibarra, and H.C. Yen. Signaling p systems and veri-fication problems. In ICALP’05, , July 11-15 2005.

90

Page 91: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[910] C. Li, Z. Dang, O.H. Ibarra, and H.-C. Yen. Signaling p systems andverification problems. In Proceedings of ICALP 2005, LNCS 3586, pages1462–1473. Springer, 2005.

[911] Huang Liang. Research on Membrane Computing. Optimization Methods.PhD thesis, Institute of Advanced Process Control, Zhejiang University,China, 2007.

[912] Huang Liang, He Xiongxiong, Wang Ning, and Xie Yi. P systems basedmulti-objective optimization algorithm. Progress in Natural Science,17(4):458–465, 2007.

[913] G. Liu and M. Ionescu. Further remarks on trace languages in p systemswith symport/antiport. In H.J. Hoogeboom, Gh. Paun, and G. Rozen-berg, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop, WMC7, pages 417–428, Leiden, The Netherlands, 2006.

[914] Guangwu Liu and Mihai Ionescu. Further remarks on trace languages inP systems with symport/antiport. In Miguel Angel Gutierrez-Naranjo,Gheorghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors, Fourth Brainstorming Week on Membrane Comput-ing, Sevilla, January 30 - February 3, 2006. Volume II, pages 161–172.Fenix Editora, 2006.

[915] Jian Qin Liu and Katsunori Shimohara. Evolutionary dynamics for het-erogeneous P systems. Journal of Xi’an Mining Institute, 2001.

[916] H. Long and Y. Fu. Building combinational p automata with rewritingand active membrane rules. In Pre-proceedings of International Con-ference on Bio-Inspired Computing - Theory and Applications, BIC-TA2006, Membrane Computing Section, pages 154–159, Wuhan, China,September 2006.

[917] H. Long and Y. Fu. Building combinational p automata with rewritingand active membrane rules. In Proc. Bio-Inspired Computing – Theoryand Applications Conf., BIC-TA 2006, Wuhan, China, September 2006,Membrane Computing Section., 2006.

[918] D. Lopez and J.M. Sempere. Editing distances between membrane struc-tures. In Pre-Proc. of the sixth Workshop on Membrane Computing,WMC6, Vienna, Austria, pages 485–504, 2005.

[919] Dorel Lucanu. Rewriting logic-based semantics of membrane systems andthe maximal concurrency. In Oscar H. Ibarra and Petr Sosık, editors,Proceedings of Prague International Workshop on Membrane Computing,pages 23–34, 2008.

[920] Mutyam Madhu. Rewriting P systems. collapsing hierarchies. Submitted.Theoretical Computer Science, to appear.

91

Page 92: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[921] Mutyam Madhu. Complexity issues in rewriting P systems. In Pre-proceedings of Fourth International Workshop on Descriptional Complex-ity of Formal Systems, DCFS-2002, London, Ontario, Canada, August21-24 2002.

[922] Mutyam Madhu. A note on P Systems with replicated rewriting. Sub-mitted, 2002.

[923] Mutyam Madhu. New results in rewriting P systems. Technical Re-port 26, Rovira i Virgili University, 2003.

[924] Mutyam Madhu. New results in rewriting P systems. In Matteo Cav-aliere, Carlos Martın-Vide, and Gheorghe Paun, editors, BrainstormingWeek on Membrane Computing, Tarragona, February 5-11 2003, pages232–240, Tarragona, February 5-11 2003.

[925] Mutyam Madhu. Probabilistic rewriting P systems. International Jour-nal of Foundations of Computer Science, 14(1):157–166, February 2003.

[926] Mutyam Madhu. Studies of P Systems as a model of cellular computing.PhD thesis, Dept. of Computer Science and Engineering, Indian Instituteof Technology, Madras, India, 2003.

[927] Mutyam Madhu and Kamala Krithivasan. Inter-membrane communi-cation in P systems. Romanian Journal of Information Science andTechnology, 3(4):335–352, 2000.

[928] Mutyam Madhu and Kamala Krithivasan. P systems with dynamic mem-brane polarization. Romanian Journal of Information Science and Tech-nology, 4(1-2):135–154, 2001.

[929] Mutyam Madhu and Kamala Krithivasan. P systems with membrane cre-ation: Universality and efficiency. In Maurice Margenstern and Yurii Ro-gozhin, editors, Machines, Computations, and Universality. Third Inter-national Conference, MCU 2001 Chisinau, Moldava, May 23-27, 2001.Proceedings., volume 2055 of Lecture Notes in Computer Science, pages276–287, Berlin, 2001. Springer-Verlag.

[930] Mutyam Madhu and Kamala Krithivasan. Universality results for somevariants of P systems. In Cristian Calude, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Multiset Processing: Mathemati-cal, Computer Science, and Molecular Computing Points of View, volume2235 of Lecture Notes in Computer Science, pages 237–253, Berlin, 2001.Springer-Verlag.

[931] Mutyam Madhu and Kamala Krithivasan. Generalized normal forms forrewriting P systems. Acta Informatica, 38(10):721–734, September 2002.

92

Page 93: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[932] Mutyam Madhu and Kamala Krithivasan. Hybrid P Systems: Im-proved universality results. Poster in Unconventional Models of Com-putation, UMC-02, Himeji, Japan, October 15-19, 2002, October 15-19 2002. Poster in Unconventional Models of Computation, UMC-02,Himeji, Japan, October 15-19, 2002.

[933] Mutyam Madhu and Kamala Krithivasan. Improved results about uni-versality of P systems. Bulletin of the EATCS, (76):162–168, February2002.

[934] Mutyam Madhu and Kamala Krithivasan. A note on hybrid P systems.Grammars, 5(3):239–244, December 2002.

[935] Mutyam Madhu and Kamala Krithivasan. A survey on some variants Psystems. In Pre-Proceedings of Second Workshop on Membrane Comput-ing, Curtea de Arges, Romania, August 2002.

[936] Mutyam Madhu and Kamala Krithivasan. On a class of P automata. In-ternational Journal of Computer Mathematics, 80(9):1111–1120, Septem-ber 2003.

[937] Mutyam Madhu and Kamala Krithivasan. A survey on some variantsP systems. In Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, andClaudio Zandron, editors, Membrane Computing: International Work-shop, WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002.Revised Papers., volume 2597 of Lecture Notes in Computer Science,pages 360–370, Curtea de Arges, Romania, July 2003. Springer-Verlag,Berlin.

[938] Mutyam Madhu and Kamala Krithivasan. Tissue P Systems with left-most rewriting. Submitted, 2004.

[939] Mutyam Madhu, Vadali S. Murty, and Kamala Krithivasan. Hardware re-alization of P Systems with carriers. Poster presentation in the Eighth In-ternational Conference on DNA based Computers, Hokkaido University,Sapporo Campus, Japan, June 10-13, 2002, June 2002. Poster presenta-tion in the Eighth International Conference on DNA based Computers,Hokkaido University, Sapporo Campus, Japan, June 10-13, 2002.

[940] Mihaela Malita. Membrane computing in Prolog. Technical Report 140,University of Auckland, 2000.

[941] Mihaela Malita. Membrane computing in Prolog. In Pre-ProceedingsWorkshop on Multiset Processing, Curtea de Arges, Romania, August2000.

[942] V. Manca. Metabolic p systems for biomolecular dynamics. In Pre-proceedings of International Conference on Bio-Inspired Computing -Theory and Applications, BIC-TA 2006, Membrane Computing Section,pages 15–26, Wuhan, China, September 2006.

93

Page 94: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[943] V. Manca. Mp systems approaches to biochemical dynamics: Biologicalrhythms and oscillations. In H.J. Hoogeboom, Gh. Paun, and G. Rozen-berg, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop, WMC7, pages 40–53, Leiden, The Netherlands, 2006.

[944] Vicenzo Manca. Topics and problems in metabolic P systems. InMiguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez,and Francisco Jose Romero-Campero, editors, Fourth BrainstormingWeek on Membrane Computing, Sevilla, January 30 - February 3, 2006.Volume II, pages 173–184. Fenix Editora, 2006.

[945] Vincenzo Manca. Monoidal systems and membrane systems. In Pre-proceedings of Workshop on Multiset Processing, Curtea de Arges, Ro-mania.

[946] Vincenzo Manca. Monoidal systems and membrane systems. TechnicalReport 140, University of Auckland, 2000. CDMTCS TR 140.

[947] Vincenzo Manca. Membrane algorithms for propositional satisfiability.Technical Report 17/01, Rovira i Virgili University, Tarragona, Spain,2001. Technical Report 17/01 of Research Group on Mathematical Lin-guistics.

[948] Vincenzo Manca. Membrane algorithms for propositional satisfiability.In Pre-Proceedings of Workshop on Membrane Computing, Curtea deArges, Romania, August 2001.

[949] Vincenzo Manca. Monoidals for molecules and membranes. RomanianJournal of Information Science and Technology, 4(1-2):155–170, 2001.

[950] Vincenzo Manca. DNA and membrane algorithms for SAT. FundamentaInformaticae, 49(1-3):205–221, January 2002. Special Issue: MembraneComputing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide,Gheorghe Paun.

[951] Vincenzo Manca. On the dynamics of P systems. In Pre-proceedings ofthe Fifth Workshop on Membrane Computing (WMC5), Milano, Italy,June 2004, pages 29–43, Milano, Italy, June 2004.

[952] Vincenzo Manca. Metabolic P systems for biochemical dynamics.Progress in Natural Science, 17(4):384–391, 2007.

[953] Vincenzo Manca. The metabolic algorithm for P systems: Principles andapplications. Theoretical Computer Science, 404(1-2):142–155, 2008.

[954] Vincenzo Manca. Enumerating membrane structures. In David WolfeCorne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing: 9th International Workshop,volume 5391 of Lecture Notes in Computer Science, pages 292–298, 2009.

94

Page 95: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[955] Vincenzo Manca and Luca Bianco. Biological networks in metabolicP systems. Biosystems, 91(3):489–498, 2008.

[956] Vincenzo Manca, Luca Bianco, and Federico Fontana. Evolution andoscillation in P systems: Applications to biological phenomena. In Gian-carlo Mauri, Gheorghe Paun, Mario J. Perez-Jimenez, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing, InternationalWorkshop, WMC5, Milano, Italy, 2004, Selected Papers (G. Mauri, Gh.Paun, M.J. Perez-Jimenez, G. Rozenberg, A. Salomaa, eds.), LNCS,Springer-Verlag, Berlin, 2005, to appear.

[957] Vincenzo Manca, Carlos Martın-Vide, and Gheorghe Paun. On the powerof P systems with replicated rewriting. Journal of Automata, Languagesand Combinatorics, 6(3):359–374, 2001.

[958] Vincenzo Manca, Roberto Pagliarini, and Simone Zorzan. Toward an MPmodel of non-photochemical quenching. In David Wolfe Corne, PierluigiFrisco, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, edi-tors, Membrane Computing: 9th International Workshop, volume 5391of Lecture Notes in Computer Science, pages 299–310, 2009.

[959] Salomon Marcus. Membranes versus DNA. Fundamenta Informati-cae, 49(1-3):223–227, January 2002. Special Issue: Membrane Comput-ing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, GheorghePaun.

[960] Solomon Marcus. Membranes versus DNA. Technical Report 17/01,Rovira i Virgili University, Tarragona, Spain, 2001. Technical Report17/01 of Research Group on Mathematical Linguistics.

[961] Solomon Marcus. Membranes versus DNA. In Pre-Proceedings of Work-shop on Membrane Computing, Curtea de Arges, Romania, August 2001.

[962] Solomon Marcus. Bridging P systems and genomics: A preliminary ap-proach. In Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, andClaudio Zandron, editors, Membrane Computing: International Work-shop, WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002.Revised Papers., volume 2597 of Lecture Notes in Computer Science,pages 371–376, Curtea de Arges, Romania, July 2003. Springer-Verlag,Berlin.

[963] Radu Mardare, Matteo Cavaliere, and Sean Sedwards. A logical charac-terization of robustness, mutants and species in colonies of agents. Inte-national Journal of Foundations of Computer Science, 19(5):1199–1221,2008.

[964] Maurice Margenstern. Can hyperbolic geometry be of help for P sys-tems? In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, Grze-gorz Rozenberg, and Arto Salomaa, editors, Membrane Computing, In-ternational Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003,

95

Page 96: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

Revised Papers, volume 2933 of Lecture Notes in Computer Science,pages 240–249. Springer, July 2003.

[965] Maurice Margenstern. Can hyperbolic geometry be of help for P systems?In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors,Preproceedings of the Workshop on Membrane Computing, pages 319–325., Tarragona, July 17-22 2003.

[966] Maurice Margenstern. Can hyperbolic geometry help molecular comput-ing? Technical Report 26, Rovira i Virgili University, 2003.

[967] Maurice Margenstern. Can hyperbolic geometry help molecular comput-ing? In Matteo Cavaliere, Carlos Martın-Vide, and Gheorghe Paun, ed-itors, Brainstorming Week on Membrane Computing, Tarragona, Febru-ary 5-11 2003, pages 226–231, Tarragona, February 5-11 2003.

[968] Maurice Margenstern, Carlos Martın-Vide, and Gheorghe Paun. Com-puting with membranes, variants with an enhanced membrane handling.In Natasha Jonoska and N.C. Seeman, editors, Proc. 7th Intern. Meetingon DNA Based Computers, pages 53–62, Tampa, Florida, USA, 2001.

[969] Maurice Margenstern, Carlos Martın-Vide, and Gheorghe Paun. Com-puting with membranes: Variants with an enhanced membrane handling.In N.C. Seeman N. Jonoska, editor, Proceedings 7th International Meet-ing on DNA Based Computers, pages 53–62, Tampa, Florida, USA, June10-13 2001.

[970] Maurice Margenstern, Vladimir Rogozhin, Yurii Rogozhin, and SergeyVerlan. About P systems with minimal symport/antiport rules and fourmembranes. In Pre-proceedings of the Fifth Workshop on MembraneComputing (WMC5), Milano, Italy, June 2004, pages 283–294, Milano,Italy, June 2004.

[971] E. Martegani, R. Tisi, F. Belotti, S. Colombo, C. Paiardi, J. Winderickx,P. Cazzaniga, D. Besozzi, and G. Mauri. Identification of an intracel-lular signalling complex for ras/camp pathway in yeast: experimentalevidences and modelling. In ISSY 25 Conf., Hanassari, Espo, Finland,2006, 2006.

[972] Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors. Membrane Computing, InternationalWorkshop, WMC 2003, Tarragona, Spain, July 17-22, 2003, Revised Pa-pers, volume 2933 of Lecture Notes in Computer Science. Springer-Verlag,2004.

[973] Carlos Martın-Vide and Victor Mitrana. P systems with valuations.In I. Antoniou, Cristian Calude, and M.J. Dinneen, editors, Unconven-tional Models of Computation, pages 154–166, London, February 2000.Springer-Verlag. Contributed paper.

96

Page 97: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[974] Carlos Martın-Vide, Victor Mitrana, and Gheorghe Paun. On the powerof P systems with valuations. Computacion y Sistemas, 5(2):120–127,2002.

[975] Carlos Martın-Vide, Andrei Paun, and Gheorghe Paun. Membrane com-puting: New results, new problems. Bulletin of the EATCS, (78):204–212, October 2002.

[976] Carlos Martın-Vide, Andrei Paun, and Gheorghe Paun. On the power ofP systems with symport rules. Journal of Universal Computer Science,8(2):317–331, 2002.

[977] Carlos Martın-Vide, Andrei Paun, and Gheorghe Paun. Membrane Com-puting: New Results, New Problems, pages 613–623. World ScientificPublishing Co. Pte. Ltd, 2004.

[978] Carlos Martın-Vide, Andrei Paun, Gheorghe Paun, and Grzegorz Rozen-berg. Membrane systems with coupled transport: Universality and nor-mal forms. Fundamenta Informaticae, 49(1-3):1–15, January 2002. Spe-cial Issue: Membrane Computing (WMC-CdeA2001) Guest Editor(s):Carlos Martın-Vide, Gheorghe Paun.

[979] Carlos Martın-Vide and Gheorghe Paun. Computing with membranes.One more collapsing hierarchy. Bulletin of the EATCS, (72):183–187,October 2000.

[980] Carlos Martın-Vide and Gheorghe Paun. String-objects in P systems. InProc. of Algebraic Systems, Formal Languages and Computations Work-shop, pages 161–169, Kyoto, 2000. RIMS Kokyuroku, Kyoto Univ.

[981] Carlos Martın-Vide and Gheorghe Paun. Computing with membranes(P systems): Universality results. In Maurice Margenstern and Yurii Ro-gozhin, editors, Machines, Computations, and Universality. Third Inter-national Conference, MCU 2001 Chisinau, Moldava, May 23-27, 2001.Proceedings., volume 2055 of Lecture Notes in Computer Science, pages82–101, Chisinau, Moldova, 2001. Springer-Verlag.

[982] Carlos Martın-Vide and Gheorghe Paun. Elements of formal languagetheory for membrane computing. Technical Report 21/01, Rovira i VirgiliUniversity, Tarragona, Spain, 2001. Technical Report 21/01 of ResearchGroup on Mathematical Linguistics.

[983] Carlos Martın-Vide and Gheorghe Paun. Language generating by meansof membrane systems. Bulletin of the EATCS, (75):199–218, October2001.

[984] Carlos Martın-Vide and Gheorghe Paun, editors. Pre-Proceedings ofWorkshop on Membrane Computing, Curtea de Arges, Romania, August2001, August 2001.

97

Page 98: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[985] Carlos Martın-Vide and Gheorghe Paun, editors. Technical Report16/01, University Rovira i Virgili, Tarragona, Spain, 2001, 2001. 266pages.

[986] Carlos Martın-Vide and Gheorghe Paun. Language generating by meansof Membrene Systems, pages 599–611. World Scientific Publishing Co.Pte. Ltd, 2004.

[987] Carlos Martın-Vide and Gheorghe Paun. P systems with Sym-port/Antiport Rules. A Survey, pages 175–192. Natural Computing Se-ries. Springer, 2004.

[988] Carlos Martın-Vide, Gheorghe Paun, J. Pazos, and Alfonso Rodrıguez-Paton. Tissue P systems. Technical Report 421, Turku Center for Com-puter Science-TUCS, September 2001. TUCS Technical Report 421.

[989] Carlos Martın-Vide, Gheorghe Paun, Juan Pazos, and AlfonsoRodrıguez-Paton. Tissue P systems. Theoretical Computer Science,296(2):295–326, March 2003.

[990] Carlos Martın-Vide, Gheorghe Paun, and Alfonso Rodriguez-Paton.On P systems with membrane creation. Computer Science Journal ofMoldova, 9(2):134–145, 2001.

[991] Carlos Martın-Vide, Gheorghe Paun, and Alfonso Rodriguez-Paton. Psystems with immediate communication. Romanian Journal of Informa-tion Science and Technology, 4(1-2):171–182, 2001.

[992] Carlos Martın-Vide, Gheorghe Paun, and Grzegorz Rozenberg. Mem-brane systems with carriers. Theoretical Computer Science, 270(1-2):779–796, January 2002.

[993] Victor Martinez, Luis Fernandez, Fernando Arroyo, and AbrahamGutierrez. HW implementation of a optimized algorithm for the ap-plication of active rules in a transition P-system. International Journalon Information Theory and Applications, 14(4):324–331, 2007.

[994] Jose L. Mate, Alfonso Rodrıguez-Paton, and Andres Silva. On the powerof P systems with DNA-Worms. Technical Report 17/01, Rovira i VirgiliUniversity, Tarragona, Spain, 2001. Technical Report 17/01 of ResearchGroup on Mathematical Linguistics.

[995] Jose L. Mate, Alfonso Rodrıguez-Paton, and Andres Silva. On the powerof P systems with DNA-Worms. In Pre-Proceedings of Workshop onMembrane Computing, Curtea de Arges, Romania, August 2001.

[996] Jose L. Mate, Alfonso Rodrıguez-Paton, and Andres Silva. On the powerof P systems with DNA-worm-objects. Fundamenta Informaticae, 49(1-3):229–239, January 2002. Special Issue: Membrane Computing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, Gheorghe Paun.

98

Page 99: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[997] Giancarlo Mauri, Marion J. Perez Jimenez, and Claudio Zandron. Ona Paun’s conjecture in membrane systems. In Jose Mira and Jose R.Alvarez, editors, Proceedings of the 2nd international work-conferenceon The Interplay Between Natural and Artificial Computation, Part I:Bio-inspired Modeling of Cognitive Tasks, volume 4527 of Lecture Notesin Computer Science, pages 180–192, 2007.

[998] Giancarlo Mauri, Gheorghe Paun, Mario J. Perez-Jimenez, GrzegorzRozenberg, and Arto Salomaa, editors. Membrane Computing, Interna-tional Workshop, WMC5, Milano, Italy, 2004, Selected Papers, volume3365 of Lecture Notes in Computer Science. Springer-Verlag, 2005. (417+ viii pages).

[999] Giancarlo Mauri, Gheorghe Paun, and Claudio Zandron, editors. Pre-proceedings of the Fifth Workshop on Membrane Computing (WMC5),Milano. Italy, June 2004. 446 pages.

[1000] Giancarlo Mauri and Claudio Zandron. Membrane Systems for Comput-ing, pages 213–232. Kluwer Academic/Plenum Publishers Hardbound,New York, July 2002.

[1001] T. Mazza. Towards a complete covering of SBML functionalities. InG. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 425–444,Thessaloniki, Greece, 2007.

[1002] Tommaso Mazza and Matteo Cavaliere. Cell cycle and tumor growth inmembrane systems with peripheral proteins. In Gabriel Ciobanu, editor,Second International Meeting on Membrane Computing and BiologicallyInspired Process Calculi, pages 145–158, 2008.

[1003] V.P. Metta and K. Krithivasan. Spiking neural p systems and petri nets.submitted, 2008.

[1004] Olivier Michel and Florent Jacquemard. Analysis of the Needham-Schroeder public-key protocol with MGS. In Pre-proceedings of the FifthWorkshop on Membrane Computing (WMC5), Milano, Italy, June 2004,pages 295–315, Milano, Italy, June 2004.

[1005] Olivier Michel and Florent Jacquemard. An Analysis of a Public–KeyProtocol with Membranes, pages 281–300. Springer-Verlag, 2005.

[1006] D. Molteni, C. Ferretti, and G. Mauri. Frequency membrane systems.In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 445–454,Thessaloniki, Greece, 2007.

[1007] Davide Molteni, Claudio Ferretti, and Giancarlo Mauri. Frequency mem-brane systems. Computing and Informatics, 27(3+):467–479, 2008.

99

Page 100: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1008] O. Moya-Mesa. Plasma membrane, compartmentation, transport, andimprecisions. In First brainstorming Workshop on Uncertainty in Mem-brane Computing, Palma de Mallorca, Spain, November 2004, 2004.

[1009] N. Murphy and D. Woods. Active membrane systems without chargesand using only symmetric elementary division characterize P. In G. Eleft-herakis and Gh. Paun P. Kefalas, editors, Pre-proceedings of MembraneComputing, International Workshop - WMC8, pages 455–470, Thessa-loniki, Greece, 2007.

[1010] Niall Murphy and Damien Woods. A characterisation of NL using mem-brane systems without charges and dissolution. Technical Report 2008-01, Department of Computer Science, National University of Ireland,Maynooth, 2008.

[1011] Niall Murphy and Damien Woods. A characterisation of NL using mem-brane systems without charges and dissolution. In Cristian S. Calude,Jose Felix Costa, Rudolf Freund, Marion Oswald, and Grzegorz Rozen-berg, editors, Proceedings of the 7th international conference on Uncon-ventional Computing, volume 5204 of Lecture Notes in Computer Science,pages 164–176, 2008.

[1012] M. Muskulus. An observation on the sevilla complexity. In Proceedingsof the ESF Exploratory Workshop on Cellular Computing (ComplexityAspects), Sevilla (Spain), January 31st - February 2nd, pages 257–266,2005.

[1013] M. Muskulus, D. Besozzi, R. Brijder, P. Cazzaniga, S. Houweling,D. Pescini, and G. Rozenberg. Cycles and communicating classes inmembrane systems and molecular dynamics. Theoretical Computer Sci-ence. To appear.

[1014] M. Muskulus and R. Brijder. Complexity of biocomputation: symbolicdynamics in membrane systems. Intern. J. Found. Computer Sci. ToAppear.

[1015] M. Muskulus and R. Brijder. First steps towards a geometry of compu-tation. In Proceedings of the Third Brainstorming Week on MembraneComputing, Sevilla (Spain), January 31st - February 4th, pages 197–218,2005.

[1016] Michael Muskulus. Identification of P system models assisted by bio-chemical databases. In Oscar H. Ibarra and Petr Sosık, editors, Proceed-ings of Prague International Workshop on Membrane Computing, pages47–49, 2008.

[1017] Michael Muskulus. Applications of page ranking in P systems. InDavid Wolfe Corne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing: 9th Interna-

100

Page 101: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

tional Workshop, volume 5391 of Lecture Notes in Computer Science,pages 311–324, 2009.

[1018] Michael Muskulus, Daniela Besozzi, Robert Brijder, Paolo Cazzaniga,Sanne Houweling, Dario Pescini, and Grzegorz Rozenberg. Cycles andcommunicating classes in membrane systems and molecular dynamics.Theoretical Computer Science, 372(2-3), 2007.

[1019] Michael Muskulus and Robert Brijder. Complexity of bio-computation:symbolic dynamics in membrane systems. International Journal of Foun-dations of Computer Science, 17(1):147–165, February 2006.

[1020] Michael Muskulus, Sanne Houweling, Grzegorz Rozenberg, Paolo Caz-zaniga Daniela Besozzi and, Dario Pescini, and Robert Brijder. Reactioncycles in membrane systems and molecular dynamics. In Miguel AngelGutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Fran-cisco Jose Romero-Campero, editors, Fourth Brainstorming Week onMembrane Computing, Sevilla, January 30 - February 3, 2006. VolumeII, pages 185–208. Fenix Editora, 2006.

[1021] M. Mutyam and K. Krithivasan. Tissue p systems with leftmost deriva-tion. Ramanujan Math. Soc. Lecture Notes Series, (3):187–196, 2007.

[1022] Madhu Mutyam. Rewriting P systems: improved hierarchies. TheoreticalComputer Science, 2004. In press.

[1023] Madhu Mutyam and Kamala Krithivasan. P systems with membranecreation: Universality and efficiency. In Y. Rogozhin M. Margenstern,editor, Machines, Computations, and Universality: Third InternationalConference, MCU 2001 Chisinau, Moldavia, May 23-27, 2001, Proceed-ings, volume 2055 of Lecture Notes In Computer Science, pages 276–287.Springer-Verlag Heidelberg, May 23-27 2001.

[1024] Madhu Mutyam, Vaka Jaya Prakash, and Kamala Krithivasan. Rewritingtissue P systems. Journal of Universal Computer Science, 10(9):1250–1271, September 2004.

[1025] H. Nagda, A. Paun, and A. Rodriguez-Paton. P systems with sym-port/antiport and time. In H.J. Hoogeboom, Gh. Paun, and G. Rozen-berg, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop, WMC7, pages 429–442, Leiden, The Netherlands, 2006.

[1026] Benedek Nagy and Laszlo Szegedi. Membrane computing and geo-graphical operating systems. Journal of Universal Computer Science,12(9):1312–1331, 2006.

[1027] Turlough Neary. On the computational complexity of spiking neuralP systems. In Cristian S. Calude, Jose Felix Costa, Rudolf Freund,Marion Oswald, and Grzegorz Rozenberg, editors, Proceedings of the 7th

101

Page 102: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

international conference on Unconventional Computing, volume 5204 ofLecture Notes in Computer Science, pages 189–205, 2008.

[1028] Turlough Neary. A small universal spiking neural P system. In ErzsebetCsuhaj-Varju, Rudolf Freund, Marion Oswald, and Kai Salomaa, editors,International Workshop on Computing with Biomolecules, pages 65–74,2008.

[1029] Isabel Nepomuceno, J.A. Nepomuceno, and Francisco Jose Romero-Campero. A tool for using the SBML format to represent P systemswhich model biological reaction networks. In Proceedings of the ThirdBrainstorming Week on Membrane Computing, Sevilla (Spain), January31st - February 4th, pages 219–228, 2005.

[1030] Isabel A. Nepomuceno-Chamorro. A Java simulator for basic transitionP systems. Technical Report 01/2004, Dept. of Computer Sciences andArtificial Intelligence, Univ. of Sevilla, 2004.

[1031] Isabel A. Nepomuceno-Chamorro. A Java simulator for basic transitionP systems. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second BrainstormingWeek on Membrane Computing, Sevilla, Spain, February 2-7 2004, pages309–315, Sevilla, Spain, February 2-7 2004.

[1032] Isabel A. Nepomuceno-Chamorro. A Java simulator for membrane com-puting. Journal of Universal Computer Science, 10(5):620–629, May2004.

[1033] V. Nguyen, D. Kearney, and G. Gioiosa. Balancing performance, flex-ibility and scalability in a parallel computing platform for membranecomputing applications. In G. Eleftherakis and Gh. Paun P. Kefalas, ed-itors, Pre-proceedings of Membrane Computing, International Workshop- WMC8, pages 471–508, Thessaloniki, Greece, 2007.

[1034] Van Nguyen, David Kearney, and Gianpaolo Gioiosa. An implementationof membrane computing using reconfigurable hardware. Computing andInformatics, 27(3+):551–569, 2008.

[1035] Van Nguyen, David Kearney, and Gianpaolo Gioiosa. An algorithm fornon-deterministic object distribution in P systems and its implementa-tion in hardware. In David Wolfe Corne, Pierluigi Frisco, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Computing:9th International Workshop, volume 5391 of Lecture Notes in ComputerScience, pages 325–354, 2009.

[1036] Dan V. Nicolau Jr., Gerardin Solana, Florin Fulga, and Dan V. Nicolau.A C library for simulating P systems. Fundamenta Informaticae, 49(1-3):241–248, January 2002. Special Issue: Membrane Computing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, Gheorghe Paun.

102

Page 103: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1037] Dan V. Nicolau Jr., Gerardin Solana, Florin Fulga, and Dan V. NicolauSr. A ”C” library for implementing P systems on the electronic com-puter (abstract). Technical Report 17/01, Rovira i Virgili University,Tarragona, Spain, 2001. Technical Report 17/01 of Research Group onMathematical Linguistics.

[1038] Dan V. Nicolau-Jr., Gerardin Solana, Florin Fulga, and Dan V. Nicolau-Sr. A C library for implementing P systems on the electronic computer(Abstract). In Pre-Proceedings of Workshop on Membrane Computing,Curtea de Arges, Romania, August 2001.

[1039] Taishin Y. Nishida. Membrane algorithm with brownian subalgorithmand genetic subalgorithm. International Journal of Foundations of Com-puter Science, 18(6):1353–1360, 2007.

[1040] Taishin Yasunobu Nishida. Simulations of photosynthesis by a K-Subsettransforming system with membranes. Technical Report 17/01, Rovirai Virgili University, Tarragona, Spain, 2001. Technical Report 17/01 ofResearch Group on Mathematical Linguistics.

[1041] Taishin Yasunobu Nishida. Simulations of photosynthesis by a K-Subsettransforming system with membranes. In Pre-Proceedings of Workshopon Membrane Computing, Curtea de Arges, Romania, August 2001.

[1042] Taishin Yasunobu Nishida. Simulations of photosynthesis by a K-Subsettransforming system with membranes. Fundamenta Informaticae, 49(1-3):249–259, January 2002. Special Issue: Membrane Computing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, Gheorghe Paun.

[1043] Taishin Yasunobu Nishida. An application of P systems: A new al-gorithm for NP-complete optimization problems. In et. al. N. Callaos,editor, Proceedings of the 8th World Multi-Conference on Systems, Cy-bernetics and Informatics, vol. V, 2004, pages 109–112, 2004.

[1044] Taishin Yasunobu Nishida. An approximate algorithm for NP-completeoptimization problems exploiting P systems. In First brainstormingWorkshop on Uncertainty in Membrane Computing, Palma de Mallorca,Spain, November 2004, 2004.

[1045] Taishin Yasunobu Nishida. An approximate algorithm for NP-completeoptimization problems exploiting P systems. Journal of Cybernetics andInformatics, V:109–112, 2004.

[1046] Taishin Yasunobu Nishida. Membrane Algorithms: Approximate Al-gorithms for NP-Complete Optimization Problems, pages 301–312.Springer-Verlag, 2005.

[1047] Taishin Yasunobu Nishida. A Membrane Computing Model of Photosyn-thesis, pages 179–200. Springer-Verlag, 2005.

103

Page 104: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1048] T.Y. Nishida. Membrane algorithm: An approximate algorithm for np-complete optimization problems eploiting p systems. In Pre-Proc. ofthe sixth Workshop on Membrane Computing, WMC6, Vienna, Austria,pages 26–43, 2005.

[1049] A. Obtulowicz. Fuzzy P systems and fuzzy rule-based decisionmakingsystems. In First brainstorming Workshop on Uncertainty in MembraneComputing, Palma de Mallorca, Spain, November 2004, 2004.

[1050] A. Obtulowicz. Relational membrane systems. In Pre-Proc. of the sixthWorkshop on Membrane Computing, WMC6, Vienna, Austria, pages505–509, 2005.

[1051] A. Obtulowicz. Mathematical (denotational) semantics of some reductsof ambient calculus and brane calculi. In H.J. Hoogeboom, Gh. Paun,and G. Rozenberg, editors, Pre-proceedings of Membrane Computing, In-ternational Workshop, WMC7, pages 443–454, Leiden, The Netherlands,2006.

[1052] A. Obtulowicz. Mathematical (denotational) semantics of some reductsof ambient calculus and brane calculi. In H.J. Hoogeboom, Gh. Paun,and G. Rozenberg, editors, Pre-proceedings of Membrane Computing, In-ternational Workshop, WMC7, pages 443–454, Leiden, The Netherlands,2006.

[1053] A. Obtulowicz. Multigraphical membrane systems: a visual formalismfor modeling complex systems in biology and evolving neural networks.In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 509–512,Thessaloniki, Greece, 2007.

[1054] A. Obtulowicz. Some mathematical methods and tools for an analy-sis of harmony-seeking computations. In M.A. Gutierrez-Naranjo, Gh.Paun, A. Romero-Jimenez, and A. Riscos-Nunez, editors, Proceedings ofthe Fifth Brainstorming Week on Membrane Computing, pages 246–262,Sevilla (Spain), January 29th - February 2 2007.

[1055] Adam Obtulowicz. Deterministic P systems for solving SAT problem.Romanian Journal of Information Science and Technology, 4(1-2):195–202, 2001.

[1056] Adam Obtulowicz. Membrane computing and one-way functions. In-ternational Journal of Foundations of Computer Science, 12(4), August2001.

[1057] Adam Obtulowicz. Note on some recursive family of P Systems withactive membranes. Submitted, 2001.

104

Page 105: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1058] Adam Obtulowicz. On P systems with active membranes solving integerfactorizing problem in a polynomial time. In Cristian Calude, GheorghePaun, Grzegorz Rozenberg, and Arto Salomaa, editors, Multiset Process-ing: Mathematical, Computer Science, and Molecular Computing Pointsof View, volume 2235 of Lecture Notes in Computer Science, pages 267–286. Springer-Verlag, 2001.

[1059] Adam Obtulowicz. Probabilistic P systems. In Pre-Proceedings of SecondWorkshop on Membrane Computing, Curtea de Arges, Romania, August2002.

[1060] Adam Obtulowicz. Mathematical models of uncertainty with a regardto membrane systems. Technical Report 26, Rovira i Virgili University,2003.

[1061] Adam Obtulowicz. Mathematical models of uncertainty with a regardto membrane systems. In Matteo Cavaliere, Carlos Martın-Vide, andGheorghe Paun, editors, Brainstorming Week on Membrane Computing,Tarragona, February 5-11 2003, pages 241–246, Tarragona, February 5-11 2003.

[1062] Adam Obtulowicz. Mathematical models of uncertainty with a regard tomembrane systems. Natural Computing, 2(3):251–263, August 2003.

[1063] Adam Obtulowicz. New mathematical foundations of membrane com-puting; attacking NP complete problems revisited. Submitted, 2003.

[1064] Adam Obtulowicz. Probabilistic P systems. In Gheorghe Paun, Grze-gorz Rozenberg, Arto Salomaa, and Claudio Zandron, editors, Mem-brane Computing: International Workshop, WMC-CdeA 2002, Curteade Arges, Romania, August 19-23, 2002. Revised Papers., volume 2597of Lecture Notes in Computer Science, pages 377–387, Curtea de Arges,Romania, July 2003. Springer-Verlag, Berlin.

[1065] Adam Obtulowicz. General multi-fuzzy sets and fuzzy membrane sys-tems. In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 316–326, Milano, Italy, June2004.

[1066] Adam Obtulowicz. Gandy’s principle for mechanisms and membranecomputing. In Third Brainstorming Week on Membrane Computing,Sevilla, 2005, Sevilla, 2005.

[1067] Adam Obtulowicz. Gandy’s principles for mechanisms and membranecomputing. In Proceedings of the ESF Exploratory Workshop on Cel-lular Computing (Complexity Aspects), Sevilla (Spain), January 31st -February 2nd, pages 267–276, 2005.

105

Page 106: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1068] Adam Obtulowicz. Gandy’s principles for mechanisms and membranecomputing. International Journal of Foundations of Computer Science,17(1):167–181, February 2006.

[1069] Adam Obtulowicz. On an idea of a (possibly) uniform data base for lifesciences from molecular biology to cognitive psychology. In Miguel AngelGutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Fran-cisco Jose Romero-Campero, editors, Fourth Brainstorming Week onMembrane Computing, Sevilla, January 30 - February 3, 2006. VolumeII, pages 209–212. Fenix Editora, 2006.

[1070] Adam Obtulowicz and Gheorghe Paun. (In search of) Probabilistic Psystems. BioSystems, 70(2):107–121, July 2003.

[1071] Marion Oswald. P Automata. PhD thesis, Faculty of Computer Science.TU Vienna, Vienna, Austria, November 2003.

[1072] Marion Oswald. Independent agents in a globalized world modelled bytissue p systems. In Conf. Artificial Life and Robotics, 2006.

[1073] Marion Oswald and Rudolf Freund. P Automata with membrane chan-nels. In M. Sugisaka and H. Tanaka, editors, Proceedings of the eighthInt. Symp. on Artificial Life and Robotics, pages 275–278, Beppu, Japan,2003.

[1074] V.J. Pakash. On the power of tissue P systems working in the maximal-one mode. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun,editors, Preproceedings of the Workshop on Membrane Computing, pages356–364, Tarragona, July 17-22 2003.

[1075] L. Pan and X. Zeng. A note on small universal spiking neural p systems.Pre-proceedings of Tenth Workshop on Membrane Computing, page 2009.

[1076] Linqiang Pan and Artiom Alhazov. Solving HPP and SAT by P sys-tems with active membranes and separation rules. Acta Informatica,43(2):131–145, 2006.

[1077] Linqiang Pan, Artiom Alhazov, and Tseren-Onolt Isdorj. Further re-marks on p systems with active membranes, separation, merging andrelease rules. Soft Computing, 9(9):686–690, September 2005.

[1078] Linqiang Pan, Artiom Alhazov, and Tseren-Onolt Ishdorj. Further re-marks on P systems with active membranes separation, merging andrelease rules. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second BrainstormingWeek on Membrane Computing Sevilla, Spain, February 2-7 2004, pages316–324, Sevilla, Spain, February 2-7 2004.

106

Page 107: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1079] Linqiang Pan and Tseren-Onolt Ishdorj. P systems with active mem-branes and separation rules. Technical Report 01/2004, Dept. of Com-puter Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[1080] Linqiang Pan and Tseren-Onolt Ishdorj. P systems with active mem-branes and separation rules. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 325–341, Sevilla, Spain, February 2-72004.

[1081] Linqiang Pan and Tseren Onolt Ishdorj. P systems with active mem-branes and separation rules. Journal of Universal Computer Science,10(5):630–649, May 2004.

[1082] Linqiang Pan and Carlos Martın-Vide. Solving multidimensional 0-1Knapsack Problem by P systems with input and active membranes.Technical Report 01/2004, Dept. of Computer Sciences and ArtificialIntelligence, Univ. of Sevilla, 2004.

[1083] Linqiang Pan and Carlos Martın-Vide. Solving multidimensional 0-1Knapsack problem by P systems with input and active membranes. InGheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, andFernando Sancho-Caparrini, editors, Second Brainstorming Week onMembrane Computing, Sevilla, Spain, February 2-7 2004, pages 342–353, Sevilla, Spain, February 2-7 2004.

[1084] Linqiang Pan and Carlos Martın-Vide. Further remark on p systemswith active membranes and two polarizations. Journal of Parallel andDistributed Computing, 66:867–872, 2006.

[1085] Linqiang Pan and Mario J. Perez-Jimenez. Computational complexityof tissue-like p systems. Journal of Complexity.

[1086] Linqiang Pan and Gheorghe Paun. Spiking neural p systems with anti-spikes. Int. J. of Computers, Communications & Control, 4(3):273–282,2009.

[1087] Linqiang Pan and Gheorghe Paun. Spiking neural p systems: An im-proved normal form. Theoretical Computer Science, 411:906–918, 2010.

[1088] Linqiang Pan, Xingyi Zhang, Xiangxiang Zeng, and Jun Wang. Researchadvances and prospect of spiking neural p systems. Chinese Journal ofComputers, 12:2090–2096, 2008.

[1089] A. Paun and Gheorghe Paun. Small universal spiking neural p systems.Submitted, 2006.

[1090] A. Paun and B. Popa. P systems with proteins on membranes. Submit-ted, 2005.

107

Page 108: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1091] A. Paun and B. Popa. P systems with proteins on membranes and mem-brane division. In Proceedings 10th DLT Conf. (invited talk), Santa Bar-bara, USA, 2006, volume 4036 of Lecture Notes in Computer Science,pages 292–303. Springer, 2006.

[1092] A. Paun and B. Popa. Rewriting p systems with communication bysymport rules. Submitted, 2006.

[1093] A. Paun and A. Rodriguez-Paton. On flip-flop membrane systems withproteins. In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings of Membrane Computing, International Workshop - WMC8,pages 513–526, Thessaloniki, Greece, 2007.

[1094] Andrei Paun. On P systems with active membranes. In I. Antoniou,Cristian Calude, and M.J. Dinneen, editors, Unconventional Models ofComputation, pages 187–201, London, February 2000. Springer-Verlag.Contributed paper.

[1095] Andrei Paun. On P systems with global rules. In Natasha Jonoskaand N.C. Seeman, editors, Proc. 7th Intern. Meeting on DNA BasedComputers, pages 43–52, Tampa, Florida, USA, 2001.

[1096] Andrei Paun. On P systems with partial parallel rewriting. RomanianJournal of Information Science and Technology, 4(1-2):203–210, 2001.

[1097] Andrei Paun. P systems with string-objects: Universality results. Tech-nical Report 17/01, Rovira i Virgili University, Tarragona, Spain, 2001.Technical Report 17/01 of Research Group on Mathematical Linguistics.

[1098] Andrei Paun. P systems with string-objects: Universality results. InPre-Proceedings of Workshop on Membrane Computing, Curtea de Arges,Romania, August 2001.

[1099] Andrei Paun. Membrane systems with symport/antiport. Universalityresults. In Pre-Proceedings of Second Workshop on Membrane Comput-ing, Curtea de Arges, Romania, August 2002.

[1100] Andrei Paun. Unconventional Models of Computation: DNA and Mem-brane Computing. PhD thesis, University of Western Ontario, London,Ontario, Canada, May 2003.

[1101] Andrei Paun and Gheorghe Paun. The power of communication: Psystems with symport/antiport. New Generation Computing, 20(3):295–305, May 2002.

[1102] Andrei Paun and Gheorghe Paun. Small universal spiking neural P sys-tems. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, AgustınRiscos-Nunez, and Francisco Jose Romero-Campero, editors, FourthBrainstorming Week on Membrane Computing, Sevilla, January 30 -February 3, 2006. Volume II, pages 213–234. Fenix Editora, 2006.

108

Page 109: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1103] Andrei Paun, Gheorghe Paun, and Alfonso Rodriguez-Paton. Furtherremarks on P systems with symport rules. Ann. Univ. Al.I. Cuza Iasi,Math.-Informatics Series, 10:3–18, 2001.

[1104] Andrei Paun, Gheorghe Paun, and Grzegorz Rozenberg. Computingby communication in networks of membranes. International Journal ofFoundations of Computer Science, 13(6):779–798, December 2002.

[1105] Andrei Paun and Mihaela Paun. On Membrane Computing Based onSplicing, chapter 36, pages 409–422. Kluwer Academic Publishers, Dor-drecht Hardbound, Dordrecht, November 2000.

[1106] Gh. Paun. A quick overview of membrane computing with some detailsabout spiking neural P systems. Frontiers of Computer Science in China.To appear.

[1107] Gh. Paun. Spiking neural p systems used as acceptors and transducers.In CIAA 2007, 12th Conf., Prague, July 2007, LNCS 4783 (J. Holub, J.Zdarek, eds.), Springer, Berlin, 2007, 1–4.

[1108] Gh. Paun. Spiking neural p systems with astrocyte-like control. In JUCS,13, 11 (2007), 1707–1721.

[1109] Gh. Paun. Membrane computing. basic ideas, results, applications. Inin G. Ciobanu, Gh. Paun, Pre-Proc. of First International Workshop onTheory and Application of P Systems, Timisoara, Romania, September26-27, pages 1–8, 2005.

[1110] Gh. Paun. Membrane computing: power, efficiency, applications, newcomputational paradigms. In B. Lowe S. Barry Cooper and L. Torenvliet,editors, First Conf. on Computability in Europe, CiE2005, Amsterdam,LNCS 3536, pages 396–407. Springer, 2005.

[1111] Gh. Paun. Languages in membrane computing. some details for spikingneural p systems. In Proceedings 10th DLT Conf. (invited talk), SantaBarbara, USA, 2006, volume 4036 of Lecture Notes in Computer Science,pages 20–35. Springer, 2006.

[1112] Gh. Paun. Membrane computing and brane calculi (some personal notes).In N. Busi and C. Zandron, editors, Proceedings MeCBIC 2006, Venice,2006.

[1113] Gh. Paun. Spiking neural P systems. A tutorial. Bulletin of the EATCS,February 2007.

[1114] Gh. Paun. Tracing some open problems in membrane computing.ROMJIST, 10(4):303–314, 2007.

109

Page 110: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1115] Gh. Paun. Twenty six research topics about spiking neural p systems. InM.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez, and A. Nunez,editors, Proceedings of the Fifth Brainstorming Week on Membrane Com-puting, pages 363–280, Sevilla (Spain), January 29th - February 2 2007.

[1116] Gh. Paun and R. Paun. Membrane computing models for economics. Aninvitation-survey. Studii si Cercetari de Calcul Economic si CiberneticaEconomica. To appear.

[1117] Gh. Paun and M.J. Perez-Jimenez. Spiking neural p systems. anoverview. In Advancing Artificial Intelligence through Biological Pro-cess Applications (A.B. Porto, A. Pazos, W. Buno, eds.), Idea GroupPubl., London, 2008.

[1118] Gh. Paun and M.J. Perez-Jimenez. Spiking neural p systems. recentresults, research topics. submitted, 2008.

[1119] Gh. Paun, M.J. Perez-Jimenez, and A. Salomaa. Bounding the indegreeof spiking neural p systems. Technical report, TUCS Technical Report773, 2006.

[1120] Gheorghe Paun. Computing with membranes. Technical Report 208,Turku Center for Computer Science-TUCS, 1998. (www.tucs.fi).

[1121] Gheorghe Paun. Computing with membranes. A correction. Two prob-lems and some bibliographical remarks. Bulletin of the EATCS, (69):141–144, October 1999.

[1122] Gheorghe Paun. Computing with membranes. An introduction. Bulletinof the EATCS, (67):139–152, February 1999.

[1123] Gheorghe Paun. Computing with membranes. Journal of Computer andSystem Sciences, 61(1):108–143, 2000. and Turku Center for ComputerScience-TUCS Report No 208.

[1124] Gheorghe Paun. Computing with membranes: Attacking NP-completeproblems. In I. Antoniou, Cristian Calude, and M.J. Dinneen, editors,Unconventional Models of Computation, pages 94–115, London, February2000. Springer-Verlag. Invited paper.

[1125] Gheorghe Paun. Computing with membranes (P systems): A variant.International Journal of Foundations of Computer Science, 11(1):167–182, March 2000. and CDMTCS TR 098, Univ. of Auckland, 1999(www.cs.auckland.ac.nz/CDMTCS).

[1126] Gheorghe Paun. Computing with membranes (P systems): Twenty sixresearch topics. Technical Report 119, University of Auckland, 2000.CDMTCS TR 119 (www.cs.auckland.ac.nz/ CDMTCS).

110

Page 111: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1127] Gheorghe Paun. From cells to computers: Computing with membranes(P systems). In Rudolf Freund and Alica Kelemenova, editors, Proc. In-tern. Workshop Grammar Systems 2000, pages 9–40, Bad Ischl, Austria,July 2000.

[1128] Gheorghe Paun. On the generative power of P systems. In Rudolf Freund,editor, Theorietag 2000. Workshop on New Computing Paradigms, pages59–78. TU University Vienna, 2000.

[1129] Gheorghe Paun. From cells to computers: Computing with membranes(P systems). BioSystems, 59(3):139–158, March 2001.

[1130] Gheorghe Paun. Further research topics about P systems. Technical Re-port 17/01, Rovira i Virgili University, Tarragona, Spain, 2001. TechnicalReport 17/01 of Research Group on Mathematical Linguistics.

[1131] Gheorghe Paun. Further research topics about P systems. In Pre-Proceedings of Workshop on Membrane Computing, Curtea de Arges,Romania, August 2001.

[1132] Gheorghe Paun. P systems with active membranes: Attacking NP-Complete problems. Journal of Automata, Languages and Combina-torics, 6(1):75–90, 2001. and CDMTCS TR 102, Univ. of Auckland,1999 (www.cs. auckland.ac.nz/CDMTCS).

[1133] Gheorghe Paun. Membrane Computing. An Introduction. Springer-Verlag, Berlin, 2002.

[1134] Gheorghe Paun. Descriptional complexity issues in membrane comput-ing. In Proc. of DCFS Workshop, pages 66–77, Budapest, Hungary, 2003.

[1135] Gheorghe Paun. Membrane computing. In Andrzej Lingas and Bengt J.Nilsson, editors, Fundamentals of Computation Theory 14th Interna-tional Symposium, FCT 2003, Malmo, Sweden, August 12-15, 2003,Proceedings., volume 2751 of Lecture Notes in Computer Science, pages284–295. Springer, 2003.

[1136] Gheorghe Paun. Further open problems in membrane computing. Tech-nical Report 01/2004, Dept. of Computer Sciences and Artificial Intelli-gence, Univ. of Sevilla, 2004.

[1137] Gheorghe Paun. Further open problems in Membrane Computing,Sevilla, Spain, february 2–7 2004. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 354–365, Sevilla, Spain, February 2-72004.

111

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[1138] Gheorghe Paun. Grammar systems vs. membrane computing: A prelim-inary approach. In Pre-Proceedings of Workshop on Grammar Systems,Computer and Automation Research Institute (SZTAKI) of the Hungar-ian Academy of Sciences (MTA)., pages 225–245, Budapest, July 5-92004.

[1139] Gheorghe Paun. Introduction to membrane computing. In First brain-storming Workshop on Uncertainty in Membrane Computing, Palma deMallorca, Spain, November 2004, 2004.

[1140] Gheorghe Paun. Learning new computing models from biology: Mem-brane computing. In International Conference on Computers andCommunications-ICCC 2004, Baile Felix Spa, Oradea, ROMANIA,Oradea, ROMANIA, May 27-29 2004.

[1141] Gheorghe Paun. Membrane computing (after the Second BrainstormingWeek, Sevilla, february 2004). Bulletin of the EATCS, June 2004.

[1142] Gheorghe Paun. Membrane computing. An introduction. In Pre-Proc. Unconventional Programming Paradigms, UPP04, Le Mont Saint-Michel, pages 39–48, September 2004.

[1143] Gheorghe Paun. Membrane computing: Main ideas, basic results, appli-cations. Idea Group Publ., London, 2004.

[1144] Gheorghe Paun. Membrane computing: Power and efficiency (a quickoverview). In THE TENTH INTERNATIONAL MEETING ON DNACOMPUTING (DNA 10), Universita’ di Milano-Bicocca, Milan, Italy,Milan, Italy, June 7-10 2004.

[1145] Gheorghe Paun. Membrane Computing: Some Non-standard Ideas,volume 2950 of Lecture Notes in Computer Science, pages 322–337.Springer, 2004.

[1146] Gheorghe Paun. Membrane computing. Some recent results and currentresearch topics. Kronos Editorial, Sevilla, 2004.

[1147] Gheorghe Paun. Membrane systems: From cells to computers. In WoL-LIC’2004 11th Workshop on Logic, Language, Information and Compu-tation, July 19th to 22nd, 2004, Paris, France, Paris, France, July 19thto 22nd 2004.

[1148] Gheorghe Paun. Further twenty six open problems in membrane com-puting. In Proceedings of the Third Brainstorming Week on MembraneComputing, Sevilla (Spain), January 31st - February 4th, pages 249–262,2005.

[1149] Gheorghe Paun. Further twenty-six open problems in membrane com-puting. In Third Brainstorming Week on Membrane Computing, Sevilla,2005, Sevilla, 2005.

112

Page 113: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1150] Gheorghe Paun. Membrane computing: Power, efficiency, applications.Submitted, 2005.

[1151] Gheorghe Paun. One more universality result for P systems with ob-jects on membranes. In Proceedings of the Third Brainstorming Weekon Membrane Computing, Sevilla (Spain), January 31st - February 4th,pages 263–274, 2005.

[1152] Gheorghe Paun. 2006 research topics in membrane computing.Nanuscript, 2006.

[1153] Gheorghe Paun. 2006 research topics in membrane computing. InMiguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez,and Francisco Jose Romero-Campero, editors, Fourth BrainstormingWeek on Membrane Computing, Sevilla, January 30 - February 3, 2006.Volume II, pages 235–252. Fenix Editora, 2006.

[1154] Gheorghe Paun and R. Paun. Membrane computing and economics:Numerical p systems. Submitted, 2005.

[1155] Gheorghe Paun and R. Paun. Membrane computing as a framework formodeling economic processes. Submitted, 2005.

[1156] Gheorghe Paun, Juan Pazos, Mario Jesus Perez-Jimenez, and AlfonsoRodriguez-Paton. Symport/antiport P systems with three objects areuniversal. Fundamenta Informaticae, 2005. To appear.

[1157] Gheorghe Paun and Mario J. Perez-Jimenez. Recent computing mod-els inspired from biology: DNA and membrane computing. Theoria,18(46):71–84, 2003.

[1158] Gheorghe Paun, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez. Psystems with tables of rules. Technical Report 01/2004, Dept. of Com-puter Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[1159] Gheorghe Paun, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez.P systems with tables of rules. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing, Sevilla,Spain, February 2-7 2004, pages 366–379, Sevilla, Spain, February 2-72004.

[1160] Gheorghe Paun, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez. Tis-sue P systems with cell division. Technical Report 01/2004, Dept. ofComputer Sciences and Artificial Intelligence, Univ. of Sevilla, 2004.

[1161] Gheorghe Paun, Mario J. Perez-Jimenez, and Agustın Riscos-Nunez. Tis-sue P systems with cell division. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, ed-itors, Second Brainstorming Week on Membrane Computing, Sevilla,

113

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Spain, February 2-7 2004, pages 380–386, Sevilla, Spain, February 2-72004.

[1162] Gheorghe Paun, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. On the reachability problem for P Systems with porters.Submitted, 2001. Proc. AFL10, Debrecen, 2002.

[1163] Gheorghe Paun and M.J. Perez-Jimenez. Membrane computing: Briefintroduction, recent results and applications. Submitted, 2005.

[1164] Gheorghe Paun, M.J. Perez-Jimenez, and G. Rozenberg. Infinite spiketrains in spiking neural p systems. Submitted, 2005.

[1165] Gheorghe Paun, M.J. Perez-Jimenez, and G. Rozenberg. Spike trains inspiking neural p systems. Submitted, 2005.

[1166] Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, andFernando Sancho-Caparrini, editors. Second Brainstorming Week onMembrane Computing, Sevilla, Spain, Feb 2-7, 2004, 2004.

[1167] Gheorghe Paun and Grzegorz Rozenberg. A guide to membrane com-puting. Theoretical Computer Science, 287(1):73–100, September 2002.

[1168] Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa. Membranecomputing with external output. Technical Report 218, Turku Centerfor Computer Science-TUCS, 1998. Report No 218 (www.tucs.fi).

[1169] Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa. Membranecomputing with external output. Fundamenta Informaticae, 41(3):313–340, February 2000.

[1170] Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, and Claudio Zan-dron, editors. Membrane Computing. International Workshop, WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002, RevisedPapers, volume 2597 of Lecture Notes in Computer Science, Berlin, 2003.Springer-Verlag. 423 + viii pages.

[1171] Gheorghe Paun, Yasubumi Sakakibara, and Takashi Yokomori. P Sys-tems on graphs of restricted forms. Publicationes Mathematicae Debre-cen, to appear, 2004. Publicationes Mathematicae Debrecen, to appear.

[1172] Gheorghe Paun, Yasuhiro Suzuki, and Hiroshi Tanaka. P systems withenergy accounting. International Journal of Computer Mathematics,78(3):343–364, 2001.

[1173] Gheorghe Paun, Yasuhiro Suzuki, Hiroshi Tanaka, and Takashi Yoko-mori. On the power of membrane division in P systems. TheoreticalComputer Science, 324(1):61–85, September 2004.

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[1174] Gheorghe Paun and Gabriel Thierrin. Multiset processing by means ofsystems of finite state transducers. Technical Report 101, University ofAuckland. CDMTCS Report (www.cs.auckland.ac.nz/CDMTCS).

[1175] Gheorghe Paun and Gabriel Thierrin. Multiset processing by means ofsystems of finite state transducers. In Pre-Proceedings of Workshop onImplementing Automata WIA99, Potsdam, August 1999.

[1176] Gheorghe Paun and Takashi Yokomori. Membrane computing based onsplicing. In E. Winfree and D. Gifford, editors, Preliminary Proceedingsof Fifth International Meeting on DNA Based Computers, pages 213–227.MIT, June 1999.

[1177] Gheorghe Paun and Takashi Yokomori. Simulating HSystems by P systems. Journal of Universal Com-puter Science, 6(1):178–193, 2000. (www.iicm.edu/jucs).http://www.jucs.org/jucs_6_1/simulating_h_systems_by.

[1178] Gheorghe Paun and Sheng Yu. On synchronization in P systems. Tech-nical Report 539, University of Western Ontario, Ontario, Canada, 1999.Report TR 539 (www.csd.uwo.ca/faculty/syu/TR539.html).

[1179] Gheorghe Paun and Sheng Yu. On synchronization in P systems. Fun-damenta Informaticae, 38(4):397–410, June 1999.

[1180] Gheorghe Paun and Claudio Zandron, editors. Pre-Proceedings of Work-shop on Membrane Computing, Curtea de Arges, Romania, August 2002,August 2002. and MolCoNet Publucation N 1, 2002 (394 pages).

[1181] R. Paun. Producers, retailers, and their investments. a membrane com-puting approach. manuscript, 2005.

[1182] Juan Pazos, Alfonso Rodrıguez-Paton, and Andres Silva. Solving SATin linear time with a neural-like membrane system. In Jose Mira andJose R. Alvarez, editors, Artificial Neural Nets. Problem Solving Meth-ods 7th International Work-Conference on Artificial and Natural NeuralNetworks, IWANN 2003, Mao, Menorca, Spain, June 3-6. Proceedings,Part II., volume 2687 of Lecture Notes in Computer Science, pages 662–669. Springer, 2003.

[1183] Antonio Perez-Jimenez, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. Computing a partial mapping by a P system: Design andverification. Technical Report 26, Rovira i Virgili University, 2003.

[1184] Antonio Perez-Jimenez, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. Computing a partial mapping by a P system: Design andverification. In Matteo Cavaliere, Carlos Martın-Vide, and GheorghePaun, editors, Brainstorming Week on Membrane Computing, Tarrag-ona, February 5-11 2003, pages 247–260, Tarragona, February 5-11 2003.

115

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[1185] Antonio Perez-Jimenez, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. Computing a partial mapping by P Systems: Design and ver-ification, 2003. M. Cavaliere, C. Martın-Vide, Gh. Paun (Eds), Brain-storming Week on Membrane Computing; Tarragona, Feb 5-11 2003,247-260.

[1186] Antonio Perez-Jimenez, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. Formal verification of a transition P system generating theset 2n + n2 + n|n > 1. Technical Report 26, Rovira i Virgili University,2003.

[1187] Antonio Perez-Jimenez, Mario J. Perez-Jimenez, and Fernando Sancho-Caparrini. Formal verification of a transition P system generating theset 2n + n2 + n|n > 1. In Matteo Cavaliere, Carlos Martın-Vide, andGheorghe Paun, editors, Brainstorming Week on Membrane Computing,Tarragona, February 5-11 2003, pages 261–269, Tarragona, February 5-11 2003.

[1188] Mario J. Perez-Jimenez. An approach to computational complexity inmembrane computing. In First brainstorming Workshop on Uncertaintyin Membrane Computing, Palma de Mallorca, Spain, November 2004,2004.

[1189] Mario J. Perez-Jimenez. Complexity clsses in membrane computing.In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 63–63, Milano, Italy, June2004.

[1190] Mario J. Perez-Jimenez and Agustın Riscos-Nunez. A linear-time solu-tion for the Knapsack problem using active membranes. In Artiom Al-hazov, Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedingsof the Workshop on Membrane Computing, pages 326–342, Tarragona,July 17-22 2003.

[1191] Mario J. Perez-Jimenez and Agustın Riscos-Nunez. A linear-time solu-tion to the Knapsack problem using P systems with active membranes. InCarlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing, InternationalWorkshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, RevisedPapers, volume 2933 of Lecture Notes in Computer Science, pages 250–268. Springer, July 2003.

[1192] Mario J. Perez-Jimenez and Francisco Jose Romero-Campero. A CLIPSsimulator for recognizer P systems with active membranes. TechnicalReport 01/2004, Dept. of Computer Sciences and Artificial Intelligence,Univ. of Sevilla, 2004.

[1193] Mario J. Perez-Jimenez and Francisco-Jose Romero-Campero. A CLIPSsimulator for recognizer P systems with active membranes. In Gheorghe

116

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Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and FernandoSancho-Caparrini, editors, Second Brainstorming Week on MembraneComputing, Sevilla, Spain, February 2-7 2004, pages 387–413, Sevilla,Spain, February 2-7 2004.

[1194] Mario J. Perez-Jimenez and Francisco Jose Romero-Campero. An effi-cient family of P systems for packing items into bins. Journal of UniversalComputer Science, 10(5):650–670, May 2004.

[1195] Mario J. Perez-Jimenez and Francisco Jose Romero-Campero. Mem-brane computing as production systems, pages 167–204. Kronos Editorial,Sevilla, 2004. To appear.

[1196] Mario J. Perez-Jimenez and Francisco Jose Romero-Campero. Solvingthe BINPACKING problem by recognizer P systems with active mem-branes. Technical Report 01/2004, Dept. of Computer Sciences and Ar-tificial Intelligence, Univ. of Sevilla, 2004.

[1197] Mario J. Perez-Jimenez and Francisco-Jose Romero-Campero. Solv-ing the BINPACKING problem by recognizer P systems with activemembranes. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second BrainstormingWeek on Membrane Computing, Sevilla, Spain, February 2-7 2004, pages414–430, Sevilla, Spain, February 2-7 2004.

[1198] Mario J. Perez-Jimenez and Francisco-Jose Romero-Campero. Trad-ing polarizations for bi-stable catalysts in P systems with active mem-branes. In Pre-proceedings of the Fifth Workshop on Membrane Com-puting (WMC5), Milano, Italy, June 2004, pages 327–342, Milano, Italy,June 2004.

[1199] Mario J. Perez-Jimenez and Francisco Jose Romero-Campero. Modellingegfr signalling network using continuous membrane systems. Submitted,2005.

[1200] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Decision P systems and the P 6= NP conjecture. In Pre-Proceedings of Second Workshop on Membrane Computing, Curtea deArges, Romania, August 2002.

[1201] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Teorıa de la complejidad en modelos de computacion celularcon membranas. Kronos Editorial, Sevilla, 2002.

[1202] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Complexity classes in cellular computing with membranes.Technical Report 26, Rovira i Virgili University, 2003.

117

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[1203] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Complexity classes in cellular computing with membranes.In Matteo Cavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors,Brainstorming Week on Membrane Computing, Tarragona, February 5-11 2003, pages 270–278, Tarragona, February 5-11 2003.

[1204] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Complexity classes in models of cellular computing with mem-branes. Natural Computing, 2(3):265–285, August 2003.

[1205] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Decision P systems and the P 6= NP conjecture. In GheorghePaun, Grzegorz Rozenberg, Arto Salomaa, and Claudio Zandron, edi-tors, Membrane Computing: International Workshop, WMC-CdeA 2002,Curtea de Arges, Romania, August 19-23, 2002. Revised Papers., volume2597 of Lecture Notes in Computer Science, pages 388–399, Curtea deArges, Romania, July 2003. Springer-Verlag, Berlin.

[1206] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Solving VALIDITY problem by active membranes with input.Technical Report 26, Rovira i Virgili University, 2003.

[1207] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Solving VALIDITY problem by active membranes with input.In Matteo Cavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors,Brainstorming Week on Membrane Computing, Tarragona, February 5-11 2003, pages 279–290, Tarragona, February 5-11 2003.

[1208] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Modelos de computacion celular con membranas. Boletinde la Sociedad Espanola de Matematica Aplicada, (29):57–88, September2004.

[1209] Mario J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. The P versus NP problem through cellular computing withmembranes, volume 2950 of Lecture Notes in Computer Science, pages338–352. Springer, 2004.

[1210] Mario J. Perez-Jimenez and Fernando Sancho-Caparrini. Computacioncelular con membranas: Un modelo no convencional. Kronos Editorial,Sevilla, 2002.

[1211] Mario J. Perez-Jimenez and Fernando Sancho-Caparrini. A formaliza-tion of transition P systems. Fundamenta Informaticae, 49(1-3):261–271,January 2002. Special Issue: Membrane Computing (WMC-CdeA2001)Guest Editor(s): Carlos Martın-Vide, Gheorghe Paun.

[1212] Mario J. Perez-Jimenez and Fernando Sancho-Caparrini. Verifying a Psystem generating squares. Romanian Journal of Information Scienceand Technology, 5(2-3), 2002.

118

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[1213] Mario J. Perez-Jimenez and Fernando Sancho-Caparrini. Verification ofnon-deterministic transition P systems solving SAT problem. TechnicalReport 26, Rovira i Virgili University, 2003.

[1214] Mario J. Perez-Jimenez and Fernando Sancho-Caparrini. Verification ofnon-deterministic transition P systems solving SAT problem. In MatteoCavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors, Brainstorm-ing Week on Membrane Computing, Tarragona, February 5-11 2003,pages 291–304, Tarragona, February 5-11 2003.

[1215] Mario Jesus Perez-Jimenez. Computational complexity aspects of mem-brane computing: Ideas, results, open problems. In Proceedings ofthe ESF Exploratory Workshop on Cellular Computing (Complexity As-pects), Sevilla (Spain), January 31st - February 2nd, pages 277–292,2005.

[1216] M.J. Perez-Jimenez. P systems-based modelling of cellular signallingpathways. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, edi-tors, Pre-proceedings of Membrane Computing, International Workshop,WMC7, pages 54–73, Leiden, The Netherlands, 2006.

[1217] M.J. Perez-Jimenez. P systems-based modelling of cellular signallingpathways. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, edi-tors, Pre-proceedings of Membrane Computing, International Workshop,WMC7, pages 54–73, Leiden, The Netherlands, 2006.

[1218] M.J. Perez-Jimenez. P systems-based modelling of cellular signallingpathways. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg, edi-tors, Pre-proceedings of Membrane Computing, International Workshop,WMC7, pages 54–73, Leiden, The Netherlands, 2006.

[1219] M.J. Perez-Jimenez and F.J. Romero-Campero. Modelling vibrio fis-cheri’s behaviour using p systems. accepted in the Systems BiologyWorkshop, ECAL 2005, September 2005.

[1220] M.J. Perez-Jimenez and F.J. Romero-Campero. A study of the robust-ness of the egfr signalling cascade using continuos membrane systems.In First Intern. Work-Conference on the Interplay between Natural andArtificial Computation, IWINAC 2005, Las Palmas de Gran Canaria,2005.

[1221] M.J. Perez-Jimenez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini. Hard problems addressed through P Systems. Submitted,2004.

[1222] M.J. Perez-Jimenez and T. Yokomori. Membrane computing schemabased on string insertions. In M.A. Gutierrez-Naranjo, Gh. Paun,A. Romero-Jimenez, and A. Nunez, editors, Proceedings of the FifthBrainstorming Week on Membrane Computing, pages 281– 298, Sevilla(Spain), January 29th - February 2 2007.

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Page 120: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1223] D. Pescini, D. Besozzi, and G. Mauri. Investigating local evolutions indynamical probabilistic p systems. In in G. Ciobanu, Gh. Paun, Pre-Proc. of First International Workshop on Theory and Application of PSystems, Timisoara, Romania, September 26-27, pages 83–90, 2005.

[1224] Dario Pescini, Daniela Besozzi, Giancarlo Mauri, and Claudio Zandron.Dynamical probabilistic P systems. International Journal of Foundationsof Computer Science, 17(1):183–204, February 2006.

[1225] Dario Pescini, Daniela Besozzi, Claudio Zandron, and Giancarlo Mauri.Dynamical probabilistic P systems: Definitions and applications. InProceedings of the Third Brainstorming Week on Membrane Computing,Sevilla (Spain), January 31st - February 4th, pages 275–288, 2005.

[1226] Dario Pescini, Paolo Cazzaniga, Claudio Ferretti, and Giancarlo Mauri.First steps towards a wet implementation for τ -DPP. In David WolfeCorne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing: 9th International Workshop,volume 5391 of Lecture Notes in Computer Science, pages 355–373, 2009.

[1227] Ion Petre. A normal form for P systems. Bulletin of the EATCS,(67):165–172, February 1999.

[1228] Ion Petre and Luigia Petre. Mobile ambients and P systems. In Workshopon Formal Languages, FCT99, Iasi, 1999.

[1229] Ion Petre and Luigia Petre. Mobile ambients and P systems. Journal ofUniversal Computer Science, 5(9):588–598, 1999.

[1230] Biljana Petreska and Christof Teuscher. A hardware membrane system.In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors,Preproceedings of the Workshop on Membrane Computing, pages 343–355, Tarragona, July 17-22 2003.

[1231] Biljana Petreska and Christof Teuscher. A reconfigurable hardware mem-brane system. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Comput-ing, International Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notes in ComputerScience, pages 269–285. Springer, July 2003.

[1232] G. Michele Pinna and Andrea Saba. An event based semantics of psystems. In Gabriel Ciobanu, editor, Second International Meeting onMembrane Computing and Biologically Inspired Process Calculi, pages174–187, 2008.

[1233] B. Popa. Membrane Systems with Limited Parallelism. PhD thesis, Col-lege of Engineering and Science, Louisiana Tech University, Ruston, USA,Ruston, USA, 2006.

120

Page 121: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1234] A. Porreca, G. Mauri, and C. Zandron. Complexity classes for membranesystems. Submitted, 2005.

[1235] V.J. Prakash and Kamala Krithivasan. Simulating boolean circuits withtissue P systems. In Pre-proceedings of the Fifth Workshop on MembraneComputing (WMC5), Milano, Italy, June 2004, pages 343–359, Milano,Italy, June 2004.

[1236] Peranandam Prakash-Mohan. Computing with membranes. Master’sthesis, TU Dresden, Fakultat Informatik, April 2001.

[1237] A. Profir, E. Gutuleac, and E. Boian. Simulation of continuous-time psystems using descriptive rewriting timed petri nets. In in G. Ciobanu,Gh. Paun, Pre-Proc. of First International Workshop on Theory andApplication of P Systems, Timisoara, Romania, September 26-27, pages91–94, 2005.

[1238] Aurelia Profir and Elena Boian. P systems of biocomputing systems. InPre-Proceedings of Second Workshop on Membrane Computing, Curteade Arges, Romania, August 2002.

[1239] Aurelia Profir and Elena Boian. Modeling molecular genetic triggersby means of P systems. In Artiom Alhazov, Carlos Martın-Vide, andGheorghe Paun, editors, Preproceedings of the Workshop on MembraneComputing, pages 365–386, Tarragona, July 17-22 2003.

[1240] Aurelia Profir, Elena Boian, N. Barbacari, E. Gutuleac, and Cleo Zelin-schi. Modelling molecular genetic trigger by means of P transducer.In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 360–362, Milano, Italy, June2004.

[1241] Y. Pu, Y. Yu, and X. Dong. Simulation of biomolecular processes by us-ing stochastic p systems. In Workshop on High Performance Computingin the Life Sciences, Ouro Preto, Brasil, October 2006.

[1242] Gheorghe Paun. Tracing some open problems in membrane computing.Romanian Journal of Information Science and Technology, 10(4):303–314, 2007.

[1243] Gheorghe Paun. Computability of the DNA and cells. Splicing and mem-brane computing. SBEB Publishing, Choundrant, Louisiana, 2008.

[1244] Gheorghe Paun. An introduction to MC, after 10 years, by means of a(partial) glossary. In Gabriel Ciobanu, editor, Second International Meet-ing on Membrane Computing and Biologically Inspired Process Calculi,pages 1–9, 2008.

121

Page 122: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1245] Gheorghe Paun and Francisco J. Romero-Campero. Membrane comput-ing as a modeling framework. cellular systems case studies. In MarcoBernardo, Pierpaolo Degano, and Gianluigi Zavattaro, editors, FormalMethods for Computational Systems Biology, volume 5016 of LectureNotes in Computer Science, pages 168–214, 2008.

[1246] Z. Qi, R. Rao, G. Xue, and J. You. A new formal model based on psystems for mobile transactions. In Proc. IEEE Intern. Conf. on ServicesComputing, SCC2004, pages 16–22, 2004.

[1247] Zhengwei Qi, Cheng Fu, Dongyu Shi, and Jinyuan You. Specificationand execution of P systems with symport/antiport rules using rewritinglogic. In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 363–371, Milano, Italy, June2004.

[1248] Zhengwei Qi, Cheng Fu, Dongyu Shi, Jinyuan You, and M. Li. Membranecalculus. A formal method for grid transactions. In Proceedings of the3rd International Conference on Grid and Cooperative Computing, GCC2004, Wuhan, China, 2004.

[1249] Zhengwei Qi and Jinyuan You. P systems and Petri nets. In Artiom Al-hazov, Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedingsof the Workshop on Membrane Computing, pages 387–403., Tarragona,July 17-22 2003.

[1250] Zhengwei Qi, Jinyuan You, Ying Jin, and Hongyan Mao. The P Systembased transaction model for mobile computing. Submitted.

[1251] Zhengwei Qi, Jinyuan You, and Hongyan Mao. P systems and Petrinets. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Membrane Computing, Interna-tional Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Re-vised Papers, volume 2933 of Lecture Notes in Computer Science, pages286–303. Springer, July 2003.

[1252] R. Rama and H. Ramesh. On generating trees by p systems with activemembranes. In in G. Ciobanu, Gh. Paun, Pre-Proc. of First Interna-tional Workshop on Theory and Application of P Systems, Timisoara,Romania, September 26-27, pages 95–98, 2005.

[1253] Raghavan Rama. Computing with P systems. Technical Report 140,University of Auckland, 2000.

[1254] Raghavan Rama. Computing with P systems. In Pre-Proceedings Work-shop on Multiset Processing, Curtea de Arges, Romania, August 2000.

[1255] H. Ramesh and R. Rama. Rewriting P systems with conditional com-munication: improved hierarchies. In G. Eleftherakis and Gh. Paun

122

Page 123: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

P. Kefalas, editors, Pre-proceedings of Membrane Computing, Interna-tional Workshop - WMC8, pages 527–538, Thessaloniki, Greece, 2007.

[1256] H. Ramesh and Raghavan Rama. Rewriting P systems with condi-tional communication: Improved hierarchies. Computing and Informat-ics, 27(3+):453–465, 2008.

[1257] D. Ramirez-Martinez and M.A. Gutierrez-Naranjo. A software tool fordealing with spiking neural p systems. In M.A. Gutierrez-Naranjo, Gh.Paun, A. Romero-Jimenez, and A. Nunez, editors, Proceedings of theFifth Brainstorming Week on Membrane Computing, pages 299–314,Sevilla (Spain), January 29th - February 2 2007.

[1258] Antonio Jesus Ramos-Espina. Uso de recursos precomputados en sis-temas celulares, chapter 3, pages 159–241. Fenix Editorial, Sevilla, 2004.

[1259] Agustın Riscos-Nunez. Cellular Programming: Efficient Resolution ofNP-Complete Numerical Problems. PhD thesis, Universidad de Sevilla,Sevilla, Spain, 2004.

[1260] Elena Rivero-Gil, Miguel A. Gutierrez-Naranjo, Alvaro Romero-Jimenez,and Agustın Riscos-Nunez. A software tool for generating graphics bymeans of P systems. In Erzsebet Csuhaj-Varju, Rudolf Freund, MarionOswald, and Kai Salomaa, editors, International Workshop on Comput-ing with Biomolecules, pages 87–100, 2008.

[1261] A. Rodriguez-Paton and P. Sosik. P systems with active membranescharacterize PSPACE, 2006.

[1262] Alfonso Rodriguez-Paton. Computing with membranes: P Systems withDNA-Worms. GECCO, 2001 (poster), 2001. GECCO, 2001 (poster).

[1263] Alfonso Rodriguez-Paton. On the universality of P systems with mem-brane creation. Bulletin of the EATCS, (74):229–234, June 2001.

[1264] Vladimir Rogozhin and Elena Boian. Simulation of mobile ambients byP systems. Part 1. In Carlos Martın-Vide, Giancarlo Mauri, GheorghePaun, Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Com-puting, International Workshop, WMC 2003, Tarragona, Spain, July,17-22, 2003, Revised Papers, volume 2933 of Lecture Notes in ComputerScience, pages 304–319. Springer, July 2003.

[1265] Vladimir Rogozhin and Elena Boian. Simulation of mobile ambients by Psystems. Part 1. In Artiom Alhazov, Carlos Martın-Vide, and GheorghePaun, editors, Preproceedings of the Workshop on Membrane Computing,pages 404–427, Tarragona, July 17-22 2003.

[1266] Vladimir Rogozhin and Elena Boian. Simulation of mobile ambients by Psystems. part 2. Technical Report 01/2004, Dept. of Computer Sciencesand Artificial Intelligence, Univ. of Sevilla, 2004.

123

Page 124: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1267] Vladimir Rogozhin and Elena Boian. Simulation of mobile ambientsby P systems. Part 2. In Gheorghe Paun, Agustın Riscos-Nunez, Al-varo Romero-Jimenez, and Fernando Sancho-Caparrini, editors, SecondBrainstorming Week on Membrane Computing, Sevilla, Spain, February2-7 2004, pages 431–442, Sevilla, Spain, February 2-7 2004.

[1268] Vladimir Rogozhin and Elena Boian. Simulation of mobile ambients bytissue P systems with a dynamic network of membranes. In InternationalConference on Computers and Communications-ICCC 2004, Baile FelixSpa, Oradea, ROMANIA, Oradea, ROMANIA, May 27-29 2004.

[1269] Y. Rogozhin and S. Verlan. On the rule complexity of universal tissue psystems. In Pre-Proc. of the sixth Workshop on Membrane Computing,WMC6, Vienna, Austria, pages 510–516, 2005.

[1270] Yurii Rogozhin, Artiom Alhazov, and Rudolf Freund. Computationalpower of symport/antiport: History, advances and open problems. InRudolf Freund, Georg Lojka, Marion Oswald, and Gheorghe Paun, edi-tors, Pre-Proc. of the Sixth Workshop on Membrane Computing WMC6,Vienna, Austria, pages 44–78, 2005.

[1271] F.J. Romero-Campero, M. Gheorghe, L. Bianco, D. Pescini, M.J. Perez-Jimenez, and R. Ceterchi. Towards probabilistic model checking on psystems using prism. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg,editors, Pre-proceedings of Membrane Computing, International Work-shop, WMC7, pages 455–473, Leiden, The Netherlands, 2006.

[1272] F.J. Romero-Campero, M. Gheorghe, L. Bianco, D. Pescini, M.J. Perez-Jimenez, and R. Ceterchi. Towards probabilistic model checking on psystems using prism. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg,editors, Pre-proceedings of Membrane Computing, International Work-shop, WMC7, pages 455–473, Leiden, The Netherlands, 2006.

[1273] F.J. Romero-Campero and M.J. Perez-Jimenez. A model of the quorumsensing system in vibrio fischeri. Artificial Life, 14(1):95–109, 2008.

[1274] Francisco J. Romero-Campero. P systems, a computational modellingframework for systems biology. PhD thesis, Universidad de Sevilla, Spain,2008.

[1275] Francisco J. Romero-Campero. P systems, a computational modellingframework for systems biology. PhD thesis, University of Sevilla, Sevilla,Spain, 2008.

[1276] Francisco J. Romero-Campero, Hongqing Cao, Miguel Camara, and Na-talio Krasnogor. Structure and parameter estimation for cell systemsbiology models. In Maarten Keijzer, editor, Proceedings of the 10th an-nual conference on Genetic and evolutionary computation, pages 331–338, 2008.

124

Page 125: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1277] Francisco J. Romero-Campero, Marian Gheorghe, Gabriel Ciobanu,John M. Auld, and Mario J. Perez-Jimenez. Cellular modelling usingP systems and process algebra. Progress in Natural Science, 17(4):375–383, 2007.

[1278] Francisco J. Romero-Campero and Mario J. Perez-Jimenez. A model ofthe quorum sensing system in Vibrio fischeri using P systems. ArtificialLife, 14(1):95–109, 2008.

[1279] Francisco J. Romero-Campero and Mario J. Perez-Jimenez. Modellinggene expression control using P systems: The Lac Operon, a case study.Biosystems, 91(3):438–457, 2008.

[1280] Francisco J. Romero-Campero, Jamie Twycross, Hongqing Cao,Jonathan Blakes, and Natalio Krasnogor. A multiscale modeling frame-work based on P systems. In David Wolfe Corne, Pierluigi Frisco, Gheo-rghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors, MembraneComputing: 9th International Workshop, volume 5391 of Lecture Notesin Computer Science, pages 64–78, 2009.

[1281] Francisco J. Romero-Campero, Jamie Twycross, and Natalio KrasnogorHongqing Cao, Jonathan Blakes. A multiscale modeling framework basedon P systems. In David Wolfe Corne, Pierluigi Frisco, Gheorghe Paun,Grzegorz Rozenberg, and Arto Salomaa, editors, Membrane Computing:9th International Workshop, volume 5391 of Lecture Notes in ComputerScience, pages 63–77, 2009.

[1282] A. Romero-Jimenez, M.A. Gutierrez-Naranjo, and M.J. Perez-Jimenez.Graphical modelling of higher plants using p systems. In H.J. Hooge-boom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Mem-brane Computing, International Workshop, WMC7, pages 474–484, Lei-den, The Netherlands, 2006.

[1283] Alvaro Romero-Jimenez. Complexity and universality in cellular comput-ing models. PhD thesis, Departamento de Ciencias de la Computacion eInteligencia Artificial. Universidad de Sevilla, Sevilla, Spain, 2003.

[1284] Alvaro Romero-Jimenez, Miguel Angel Gutierrez-Naranjo, and Mario-Jesus Perez-Jimenez. The growth of branching structures with P systems.In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, Agustın Riscos-Nunez, and Francisco Jose Romero-Campero, editors, Fourth Brain-storming Week on Membrane Computing, Sevilla, January 30 - February3, 2006. Volume II, pages 253–266. Fenix Editora, 2006.

[1285] Alvaro Romero-Jimenez and Mario J. Perez-Jimenez. Generation of dio-phantine sets by computing p systems with external output. In CristianCalude, Michael J. Dinneen, and Ferdinand Peper, editors, Unconven-tional Models of Computation: Third International Conference, UMC2002, Kobe, Japan, October 15-19, 2002. Proceedings, volume 2509 of

125

Page 126: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

Lecture Notes In Computer Science, pages 176–190, London, UK, Octo-ber 15–19 2002. Springer-Verlag Heidelberg.

[1286] Alvaro Romero-Jimenez and Mario J. Perez-Jimenez. Simulating Turingmachines by P systems with external output. Fundamenta Informati-cae, 49(1-3):273–278, January 2002. Special Issue: Membrane Comput-ing (WMC-CdeA2001) Guest Editor(s): Carlos Martın-Vide, GheorghePaun.

[1287] Alvaro Romero-Jimenez and Mario J. Perez-Jimenez. Computing par-tial recursive functions by transition P systems. In Carlos Martın-Vide,Giancarlo Mauri, Gheorghe Paun, Grzegorz Rozenberg, and Arto Sa-lomaa, editors, Membrane Computing, International Workshop, WMC2003, Tarragona, Spain, July, 17-22, 2003, Revised Papers, volume 2933of Lecture Notes in Computer Science, pages 320–340. Springer, July2003.

[1288] Alvaro Romero-Jimenez and Mario J. Perez-Jimenez. Computing partialrecursive functions through transition P systems. In Artiom Alhazov,Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedings of theWorkshop on Membrane Computing, pages 428–444, Tarragona, July 17-22 2003.

[1289] Grzegorz Rozenberg. Selectivity in molecular computing. In Pre-proceedings of the Fifth Workshop on Membrane Computing (WMC5),Milano, Italy, June 2004, pages 64–64, Milano, Italy, June 2004.

[1290] N. Sabadini and R.F.C. Walters. Hierarchical automata and p systems.Electronic Notes in Theoretical Computer Science, (78):1–15, 2003.

[1291] F. Sancho-Caparrini. A note on complexity measures for probabilisticP systems. In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, and Fernando Sancho-Caparrini, editors, Second BrainstormingWeek on Membrane Computing, Sevilla, Spain, February 2-7 2004, pages443–448, Sevilla, Spain, February 2-7 2004.

[1292] Fernando Sancho-Caparrini. Verification of Programs in UnconventionalComputing Models. PhD thesis, University of Sevilla, Sevilla, Spain,2002.

[1293] Fernando Sancho-Caparrini. A note on complexity measures for proba-bilistic P systems. Technical Report 01/2004, Dept. of Computer Sciencesand Artificial Intelligence, Univ. of Sevilla, 2004.

[1294] D. Sburlan. New results on P systems with multiset promoted/inhibitedrules. Bull. PAMM, 2164, 2004. pages 45–54.

[1295] D. Sburlan. Modeling the dynamical parallelism of bio-systems. In Pre-Proc. of the sixth Workshop on Membrane Computing, WMC6, Vienna,Austria, pages 517–529, 2005.

126

Page 127: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1296] D. Sburlan. Non-cooperative p systems with priorities characterizepset0l. In Pre-Proc. of the sixth Workshop on Membrane Computing,WMC6, Vienna, Austria, pages 530–539, 2005.

[1297] Dragos Sburlan. Clock-free P systems. In Pre-proceedings of the FifthWorkshop on Membrane Computing (WMC5), Milano, Italy, June 2004,pages 372–383, Milano, Italy, June 2004.

[1298] Dragos Sburlan. From cells to software architecture. A P system outlookof computational design. In Third Workshop on Mathematical Modellingof Environmental and Life Sciences Problems, Constancta, 2004.

[1299] Dragos Sburlan. Membrane systems with promoters/inhibitors. fromcomputational universality to algorithms. Technical Report 04/2004,Sevilla University, 2004. RNGC Report 04/2004.

[1300] Dragos Sburlan. Further results on P systems with promoters/inhibitors.In Proceedings of the Third Brainstorming Week on Membrane Comput-ing, Sevilla (Spain), January 31st - February 4th, pages 289–304, 2005.

[1301] Dragos Sburlan. Further results on P systems with promoters/inhibitors.International Journal of Foundations of Computer Science, 17(1):205–221, February 2006.

[1302] Dragos Sburlan. Promoting and Inhibiting Contexts in Membrane Com-puting. PhD thesis, University of Sevilla, Sevilla, Spain, 2006.

[1303] J.M. Sempere and D. Lopez. Identifying p rules from membrane struc-tures with an error-correcting approach. In H.J. Hoogeboom, Gh. Paun,and G. Rozenberg, editors, Pre-proceedings of Membrane Computing, In-ternational Workshop, WMC7, pages 485–500, Leiden, The Netherlands,2006.

[1304] J.M. Sempere and D. Lopez. Characterizing membrane structuresthrough multiset tree automata. In G. Eleftherakis and Gh. Paun P. Ke-falas, editors, Pre-proceedings of Membrane Computing, InternationalWorkshop - WMC8, pages 539–550, Thessaloniki, Greece, 2007.

[1305] J.M. Sempere and D. Lopez. On two families of multiset tree au-tomata. In M.A. Gutierrez-Naranjo, Gh. Paun, A. Romero-Jimenez,and A. Nunez, editors, Proceedings of the Fifth Brainstorming Week onMembrane Computing, pages 315–325, Sevilla (Spain), January 29th -February 2 2007.

[1306] Jose M. Sempere. P systems with external input and learning strate-gies. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Membrane Computing, Interna-tional Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Re-vised Papers, volume 2933 of Lecture Notes in Computer Science, pages341–356. Springer, July 2003.

127

Page 128: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1307] Jose M. Sempere. P systems with external input and learning strategies.In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors,Preproceedings of the Workshop on Membrane Computing, pages 445–448, Tarragona, July 17-22 2003.

[1308] Jose M. Sempere. Complexity applications of covering rules in P systems,pages 277–291. Kronos Editorial, Sevilla, 2004. To appear.

[1309] Jose M. Sempere. Covering reductions and degrees in P systems. In Pre-proceedings of the Fifth Workshop on Membrane Computing (WMC5),Milano, Italy, June 2004, pages 384–391, Milano, Italy, June 2004.

[1310] Jose M. Sempere. Covering rules in P systems: Some preliminary ideas.Technical Report 01/2004, Dept. of Computer Sciences and ArtificialIntelligence, Univ. of Sevilla, 2004.

[1311] Jose M. Sempere. Covering rules in P systems: Some preliminary ideas.In Gheorghe Paun, Agustın Riscos-Nunez, Alvaro Romero-Jimenez, andFernando Sancho-Caparrini, editors, Second Brainstorming Week onMembrane Computing, Sevilla, Spain, February 2-7 2004, pages 449–456, Sevilla, Spain, February 2-7 2004.

[1312] Jose M. Sempere. Translating multiset tree automata into P systems. InDavid Wolfe Corne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozen-berg, and Arto Salomaa, editors, Membrane Computing: 9th Interna-tional Workshop, volume 5391 of Lecture Notes in Computer Science,2009.

[1313] Jose M. Sempere and D. Lopez. Recognizing membrane structures withtree automata. In Proceedings of the Third Brainstorming Week on Mem-brane Computing, Sevilla (Spain), January 31st - February 4th, pages305–316, 2005.

[1314] Traian Serbanuta, Gheorghe Stefanescu, and Grigore Rosu. Definingand executing P systems with structured data in K. In David WolfeCorne, Pierluigi Frisco, Gheorghe Paun, Grzegorz Rozenberg, and ArtoSalomaa, editors, Membrane Computing: 9th International Workshop,volume 5391 of Lecture Notes in Computer Science, pages 374–393, 2009.

[1315] S.Hemalatha, K.S.Dersanambika, K.G.Subramanian, and C. Sri HariNagore. P systems generating 3d rectangular picture languages. In inG. Ciobanu, Gh. Paun, Pre-Proc. of First International Workshop onTheory and Application of P Systems, Timisoara, Romania, September26-27, pages 69–74, 2005.

[1316] Andrzej Skowron, editor. Fundamenta Informaticae, volume 49, 2002.

[1317] S.N. and G. Ciobanu. On the computational power of enhanced mobilemembranes. submitted, 2008.

128

Page 129: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1318] P. Sosik. On evolutionary lineages of membrane systems. In Pre-Proc. ofthe sixth Workshop on Membrane Computing, WMC6, Vienna, Austria,pages 79–93, 2005.

[1319] Petr Sosik. P systems versus register machines: two universalityproofs. In Pre-Proceedings of Second Workshop on Membrane Comput-ing, Curtea de Arges, Romania, August 2002.

[1320] Petr Sosık. The computational power of cell division in P systems: Beat-ing down parallel computers? Natural Computing, 2(3):287–298, August2003.

[1321] Petr Sosık. The power of catalysts and priorities in membranes. Gram-mars, 6:13–24, 2003.

[1322] Petr Sosık. Solving a PSPACE-complete problem by P systems withactive membranes. Technical Report 26, Rovira i Virgili University, 2003.

[1323] Petr Sosik. Solving a PSPACE-Complete Problem by P systems withactive membranes. In Matteo Cavaliere, Carlos Martın-Vide, and Gheo-rghe Paun, editors, Brainstorming Week on Membrane Computing, Tar-ragona, February 5-11 2003, pages 305–312, Tarragona, February 5-112003.

[1324] Petr Sosik and Rudolf Freund. String rewriting sequential P systems andregulated rewriting. In Proc. Conf. Developments in Language Theory,Vienna, 2001.

[1325] Petr Sosik and Rudolf Freund. P systems without priorities are com-putationally universal. In Gheorghe Paun, Grzegorz Rozenberg, ArtoSalomaa, and Claudio Zandron, editors, Membrane Computing: Interna-tional Workshop, WMC-CdeA 2002, Curtea de Arges, Romania, August19-23, 2002. Revised Papers., volume 2597 of Lecture Notes in ComputerScience, pages 400–409, Curtea de Arges, Romania, July 2003. Springer-Verlag, Berlin.

[1326] Petr Sosık and Jirı Matysek. Membrane computing: when communi-cation is enough. In Cristian Calude, Michael J. Dinneen, and Ferdi-nand Peper, editors, Unconventional Models of Computation: Third In-ternational Conference, UMC 2002, Kobe, Japan, October 15-19, 2002.Proceedings, volume 2509 of Lecture Notes In Computer Science, pages264–275, London, UK, October 15–19 2002. Springer-Verlag Heidelberg.

[1327] Petr Sosik and Jiri Matysek. Membranove vypocty: komunikace versusreakce, pages 233–244. Slezska Univ., Opava, 2002. in vol ”Kognice aumely zivot II”.

[1328] Petr Sosık and Alfonso Rodrıguez-Paton. Membrane computing andcomplexity theory: A characterization of PSPACE. Journal of Computerand System Sciences, 73(1):137–152, 2007.

129

Page 130: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1329] Antoine Spicher, Olivier Michel, Mikolaj Cieslak, Jean-Louis Giavitto,and Przemyslaw Prusinkiewicz. Stochastic P systems and the simula-tion of biochemical processes with dynamic compartments. Biosystems,91(3):458–472, 2008.

[1330] I. Stamatopoulou, P. Kefalas, and M. Gheorghe. OperasCC : An instanceof a formal framework for MAS modelling based on population P systems.In G. Eleftherakis and Gh. Paun P. Kefalas, editors, Pre-proceedings ofMembrane Computing, International Workshop - WMC8, pages 551–566,Thessaloniki, Greece, 2007.

[1331] Ioanna Stamatopoulou, Marian Gheorghe, and Petros Kefalas. Mod-elling of dynamic configuration of biology-inspired multi-agent systemswith communicating X-machines and population P systems. In Pre-proceedings of the Fifth Workshop on Membrane Computing (WMC5),Milano, Italy, June 2004, pages 392–404, Milano, Italy, June 2004.

[1332] Ioanna Stamatopoulou, Petros Kefalas, George Eleftherakis, and MarianGheorghe. A modeling language and tool for population P systems.In Panayiotis Bozanis and Elias N. Houstis, editors, 10th PanhellenicConference on Informatics, pages 142–152, 2005.

[1333] Ioanna Stamatopoulou, Petros Kefalas, and Marian Gheorghe. OPERAS:A framework for the formal modelling of multi-agent systems and its ap-plication to swarm-based systems. In Alexander Artikis, Gregory M.O’Hare, Kostas Stathis, and George Vouros, editors, Engineering Soci-eties in the Agents World VIII: 8th International Workshop, volume 4995of Lecture Notes In Artificial Intelligence, pages 158–174, 2008.

[1334] Gh. Stefan. Membrane computing in connex environment. In G. Eleft-herakis and Gh. Paun P. Kefalas, editors, Pre-proceedings of MembraneComputing, International Workshop - WMC8, pages 81–98, Thessa-loniki, Greece, 2007.

[1335] Gheorghe Stefan. Chaotic membrane computation with cellular au-tomata, 2002.

[1336] K. G. Subramanian, Rosihan M. Ali, Atulya K. Nagar, and MauriceMargenstern. Array P systems and t-communication. Fundamenta In-formaticae, 91(1):145–159, 2009.

[1337] K. G. Subramanian, R. Saravanan, M. Geethalakshmr, P. Helen Chan-dra, and M. Margenstern. P systems with array objects and array rewrit-ing rules. Progress in Natural Science, 17(4):479–485, 2007.

[1338] K.G. Subramanian, M. Geethalakshmi, and P. Helen Chandra. Arrayrewriting p systems generating rectangular arrays. In National Confer-ence in Intelligent Optimization Modeling Gandhigram Rural Institute-Deemed University, India, India, March 2006.

130

Page 131: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1339] K.G. Subramanian, S. Hemalatha, and C. Sri Hari Nagore. On image gen-eration by sequential/parallel rewriting p systems. In Proc. Intern. Conf.on Signal Processing, Communications and Networking, Anna Univer-sity, Chennai, IEEE - IETE, pages 70–73, 2007.

[1340] K.G. Subramanian, S. Hemalatha, C. Sri Hari Nagore, and M. Margen-stern. On the power of p systems with parallel rewriting and conditionalcommunication. Romanian Journal of Information Science and Technol-ogy, 2006. Accepted.

[1341] K.G. Subramanian, Linqiang Pan, See Keong Lee, and Atulya K. Nagar.P systems and context-free 2d picture languages. Proceedings of the 4thBIC-TA, pages 336–340, 2009.

[1342] K.G. Subramanian, R. Saravanan, M. Geethalakshmi, P. Helen Chandra,and M. Margenstern. P systems with array objects and array rewritingrules. In Pre-proceedings of International Conference on Bio-InspiredComputing - Theory and Applications, BIC-TA 2006, Membrane Com-puting Section, pages 160–167, Wuhan, China, September 2006.

[1343] K.G. Subramanian, R. Saravanan, M. Geethalakshmi, P. Helen Chandra,and M. Margenstern. P systems with array objects and array rewritingrules. In Proc. Bio-Inspired Computing – Theory and Applications Conf.,BIC-TA 2006, Wuhan, China, September 2006, Membrane ComputingSection., 2006.

[1344] K.G. Subramanian, R. Saravanan, and K. Rangarajan. Array p sys-tems and basic puzzle grammars. In National Conference in IntelligentOptimization Modeling Gandhigram Rural Institute-Deemed University,India, India, March 2006.

[1345] K.G. Subramanian, D.G. Thomas, M.H. Begum, and P.H. Chandra. Anote on self crossover and splicing P systems. Technical Report 17/01,Rovira i Virgili University, Tarragona, Spain, 2001. Technical Report17/01 of Research Group on Mathematical Linguistics.

[1346] K.G. Subramanian, D.G. Thomas, M.H. Begum, and P.H. Chandra. Anote on self crossover and splicing P Systems, 2001. Pre-Proceedings ofWMC 2001 (No esta en los proceedings: Fundamenta Informaticae 49).

[1347] Y. Suzuki. An attempt to analyze the dynamics of abstract rewritingsystems on multisets. In H.J. Hoogeboom, Gh. Paun, and G. Rozenberg,editors, Pre-proceedings of Membrane Computing, International Work-shop, WMC7, pages 501–506, Leiden, The Netherlands, 2006.

[1348] Y. Suzuki. Dynamics of an abstract chemical system with few molecules.In M. Sugisaka and H. Tanaka, editors, Proceedings of the 12th Int.Symposium on Artificial Life and Robotics, pages 506–508, Beppu, Oita,Japan, Jan 25-27 2007.

131

Page 132: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1349] Yasuhiro Suzuki, Daniela Besozzi, Claudio Zandron, Hiroshi Tanaka, andGiancarlo Mauri. Toward a novel computational framework for molecularcomputing: chemical reaction as computation. Submitted, 2004. DNA10,Milano, 2004.

[1350] Yasuhiro Suzuki, Yoshi Fujiwara, Hiroshi Tanaka, and Junji Takabayashi.Artificial life applications of a class of P systems: Abstract rewritingsystems on multisets. In Cristian Calude, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Multiset Processing: Mathemati-cal, Computer Science, and Molecular Computing Points of View, volume2235 of Lecture Notes in Computer Science, pages 299–346, Berlin, 2001.Springer-Verlag.

[1351] Yasuhiro Suzuki, S. Ogishima, and Hiroshi Tanaka. Modeling the p53signaling network by using P systems. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedings of the Workshop onMembrane Computing, pages 449–454, Tarragona, July 17-22 2003.

[1352] Yasuhiro Suzuki, Junji Takabayashi, and Hiroshi Tanaka. Adaptive be-havior in a tritrophic interactions consisting of plants, herbivors andcarnivores. In The Sixth International Conference on the Simulationof Adaptive Behavior (SAB2000) September 11-15 2000, Paris, France,September 2000.

[1353] Yasuhiro Suzuki, Junji Takabayashi, and Hiroshi Tanaka. Investigationof an Ecological System by Using an Abstract Rewriting System on Mul-tisets, pages 300–309. Editura Academiei Romane, Bucharest, August2000.

[1354] Yasuhiro Suzuki and Hiroshi Tanaka. Artificial life and P systems. Tech-nical Report 140, University of Auckland, 2000.

[1355] Yasuhiro Suzuki and Hiroshi Tanaka. Artificial life and P systems. InPre-Proceedings Workshop on Multiset Processing, Curtea de Arges, Ro-mania, August 2000.

[1356] Yasuhiro Suzuki and Hiroshi Tanaka. Chemical evolution among artificialproto-cells. Artificial Life, 7:54–63, 2000.

[1357] Yasuhiro Suzuki and Hiroshi Tanaka. Computational living systemsbased on an abstract chemical system. In Proc. CEC2000, pages 1369–1376. IEEE, 2000.

[1358] Yasuhiro Suzuki and Hiroshi Tanaka. A new molecular computing model,artificial cell systems. In Genetic and Evolutionary Computation Conf.GECCO, pages 833–840. Morgan Kaufman, 2000.

[1359] Yasuhiro Suzuki and Hiroshi Tanaka. On a LISP implementation ofa class of P systems. Romanian Journal of Information Science andTechnology, 3(2):173–186, 2000.

132

Page 133: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1360] Yasuhiro Suzuki and Hiroshi Tanaka. Abstract rewriting systems on mul-tisets and their application for modelling complex behaviours. TechnicalReport 26, Rovira i Virgili University, 2003.

[1361] Yasuhiro Suzuki and Hiroshi Tanaka. Abstract rewriting systems on mul-tisets and their application for modelling complex behaviours. In MatteoCavaliere, Carlos Martın-Vide, and Gheorghe Paun, editors, Brainstorm-ing Week on Membrane Computing, Tarragona, February 5-11 2003,pages 313–331, Tarragona, February 5-11 2003.

[1362] Yasuhiro Suzuki and Hiroshi Tanaka. Modeling p53 Signaling Pathwaysby Using Multiset Processing, pages 201–214. Springer-Verlag, 2005.

[1363] A. Syropoulos. Fuzzyfying P Systems. Submitted, 2003.

[1364] A. Syropoulos. Fuzzifying P systems. In First brainstorming Workshopon Uncertainty in Membrane Computing, Palma de Mallorca, Spain,November 2004, 2004.

[1365] A. Syropoulos. On P systems and distributed computing. In Pre-proceedings of the Fifth Workshop on Membrane Computing (WMC5),Milano, Italy, June 2004, pages 405–413, Milano, Italy, June 2004.

[1366] A. Syropoulos, Stratos Doumanis, and Kostantinos T. Sotiriades. Com-puting recursive functions with P systems. In Pre-proceedings of the FifthWorkshop on Membrane Computing (WMC5), Milano, Italy, June 2004,pages 414–421, Milano, Italy, June 2004.

[1367] Apostolos Syropoulos, Eleftherios G. Mamatas, Peter C. Allilomes, andKonstantinos T. Sotiriades. A distributed simulation of transition P sys-tems. In Carlos Martın-Vide, Giancarlo Mauri, Gheorghe Paun, GrzegorzRozenberg, and Arto Salomaa, editors, Membrane Computing, Interna-tional Workshop, WMC 2003, Tarragona, Spain, July, 17-22, 2003, Re-vised Papers, volume 2933 of Lecture Notes in Computer Science, pages357–368. Springer, July 2003.

[1368] Apostolos Syropoulos, Eleftherios G. Mamatas, Peter C. Allilomes, andKonstantinos T. Sotiriades. A distributed simulation of transition P sys-tems. In Carlos Martın-Vide, Giancarlo Mauri, Grzegorz Rozenberg Ghe-orghe Paun, and Arto Salomaa, editors, Membrane Computing, Interna-tional Workshop, WMC 2003, Tarragona, Spain, July 17-22, 2003, Re-vised Papers, volume 2933 of Lecture Notes In Computer Science, pages357–368. Springer-Verlag Heidelberg, 2004.

[1369] A. Tejedor, L. Fernandez, F. Arroyo, and G. Bravo. An architecture forattacking the bottleneck communication in P systems. In M. Sugisakaand H. Tanaka, editors, Proceedings of the 12th Int. Symposium on Ar-tificial Life and Robotics, pages 500–505, Beppu, Oita, Japan, Jan 25-272007.

133

Page 134: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1370] J.A. Tejedor, L. Fernandez, F. Arroyo, and S. Gomez. Algorithm of rulesapplications based on competitiveness of evolution rules. In G. Eleft-herakis and Gh. Paun P. Kefalas, editors, Pre-proceedings of MembraneComputing, International Workshop - WMC8, pages 567–580, Thessa-loniki, Greece, 2007.

[1371] G. Terrazas, N. Krasnogor, M. Gheorghe, F. Bernardini, S. Diggle, andM. Camara. An environment aware p system model of quorum sens-ing, new computational paradigms. In B. Lowe S. Barry Cooper andL. Torenvliet, editors, First Conf. on Computability in Europe, CiE2005,Amsterdam, LNCS 3536, pages 479–485. Springer, 2005.

[1372] C. Teuscher. From membranes to systems: self-configuration and self-replication in membrane systems. BioSystems. To appear (IPCAT 2005).

[1373] Christof Teuscher. Chemical blending with particles, cells and artifi-cial chemistries. In Pre-Proc. Unconventional Programming Paradigms,UPP04, Le Mont Saint-Michel, pages 29–37, September 2004.

[1374] Jamie Twycross, Francisco J. Romero-Campero, Malcolm Bennett,Miguel Camara, and Natalio Krasnogor. Modular assembly of cell sys-tems biology models using P systems. In Oscar H. Ibarra and PetrSosık, editors, Proceedings of Prague International Workshop on Mem-brane Computing, pages 51–62, 2008.

[1375] K. Ueda and N. Nato. LMNtal: A language model with links and mem-branes. In Pre-proceedings of the Fifth Workshop on Membrane Com-puting (WMC5), Milano, Italy, June 2004, pages 65–80, Milano, Italy,June 2004.

[1376] M. Umeki and Y. Suzuki. Direct simulation of the oregonator model byusing a class of P systems. In G. Eleftherakis and Gh. Paun P. Kefalas,editors, Pre-proceedings of Membrane Computing, International Work-shop - WMC8, pages 581–588, Thessaloniki, Greece, 2007.

[1377] Mai Umeki and Yasuhiro Suzuki. A simple membrane computingmethod for simulating bio-chemical reactions. Computing and Informat-ics, 27(3+):515–528, 2008.

[1378] Roxana Vasilco, Alina Popescu, Roxandra Chiurtu, and Dan Dascalu.The architecture for living structures - a possible basis for molecularcomputing. In Gheorghe Paun, Grzegorz Rozenberg, Arto Salomaa, andClaudio Zandron, editors, Membrane Computing: International Work-shop, WMC-CdeA 2002, Curtea de Arges, Romania, August 19-23, 2002.Revised Papers., volume 2597 of Lecture Notes in Computer Science,pages 410–421, Curtea de Arges, Romania, July 2003. Springer-Verlag,Berlin.

134

Page 135: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1379] Gyorgy Vaszil. On the size of P systems with minimal symport/antiport.In Pre-proceedings of the Fifth Workshop on Membrane Computing(WMC5), Milano, Italy, June 2004, pages 422–431, Milano, Italy, June2004.

[1380] Gyorgy Vaszil. On a class of P automata as a machine model for lan-guages over infinite alphabets. In Proceedings of the Third BrainstormingWeek on Membrane Computing, Sevilla (Spain), January 31st - February4th, pages 317–326, 2005.

[1381] Gyorgy Vaszil. A class of P automata for characterizing context-free lan-guages. In Miguel Angel Gutierrez-Naranjo, Gheorghe Paun, AgustınRiscos-Nunez, and Francisco Jose Romero-Campero, editors, FourthBrainstorming Week on Membrane Computing, Sevilla, January 30 -February 3, 2006. Volume II, pages 267–276. Fenix Editora, 2006.

[1382] S. Verlan, F. Bernardini, M. Gheorghe, and M. Margenstern. On com-munication in tissue p systems: Conditional uniport. In H.J. Hooge-boom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedings of Mem-brane Computing, International Workshop, WMC7, pages 507–521, Lei-den, The Netherlands, 2006.

[1383] Sergei Verlan. Communicating distributed h systems with alternatingfilters and tissue p systems with minimal symport/antiport, 2003. EMCCWorkshop - 2nd Annual MolCoNet Meeting November 27-29, 2003 Wien,Austria.

[1384] Sergey Verlan. About splicing P systems with immediate communicationand non-extended splicing P Systems. In Carlos Martın-Vide, GiancarloMauri, Gheorghe Paun, Grzegorz Rozenberg, and Arto Salomaa, editors,Membrane Computing, International Workshop, WMC 2003, Tarragona,Spain, July, 17-22, 2003, Revised Papers, volume 2933 of Lecture Notesin Computer Science, pages 369–382. Springer, July 2003.

[1385] Sergey Verlan. About splicing P systems with immediate communicationand non-extended splicing P Systems. In Artiom Alhazov, Carlos Martın-Vide, and Gheorghe Paun, editors, Preproceedings of the Workshop onMembrane Computing, pages 461–473., Tarragona, July 17-22 2003.

[1386] Sergey Verlan. Communicating distributed H Systems with alternatingfilters and tissue P systems with minimal symport/antiport. In EMCCWorkshop, Vienna, November 2003.

[1387] Sergey Verlan. Head systems and application to bio-informatics. PhDthesis, LITA, Universite de Metz, Metz, France, 2004.

[1388] Sergey Verlan. Tissue P Systems with minimal symport/antiport, 2004.DLT’04 - Eighth International Conference on Developments in LanguageTheory, Auckland, New Zealand - December 13-17 2004.

135

Page 136: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1389] Sergey Verlan, Francesco Bernardini, Marian Gheorghe, and MauriceMargenstern. Generalized communicating P systems. Theoretical Com-puter Science, 404(1-2):170–184, 2008.

[1390] C. Versari. Encoding catalytic p systems in π@. In N. Busi and C. Zan-dron, editors, Proceedings MeCBIC 2006, Venice, 2006.

[1391] A. Vitale and G. Mauri. Communication via mobile vesicles in branecalculi. In N. Busi and C. Zandron, editors, Proceedings MeCBIC 2006,Venice, 2006.

[1392] Antonio Vitale, Giancarlo Mauri, and Claudio Zandron. Simulation ofa bounded symport/antiport P system with Brane calculi. Biosystems,91(3):558–571, 2008.

[1393] J. Wang, H.J. Hoogeboom, L. Pan, and Gheorghe Paun. Spiking neural psystems with weights and thresholds. Pre-proceedings of Tenth Workshopon Membrane Computing, 2009.

[1394] Jiri Wiedermann. Coupling computational and non-computational pro-cesses: Minimal artificial life. In Pre-proceedings of the Fifth Workshopon Membrane Computing (WMC5), Milano, Italy, June 2004, pages 432–445, Milano, Italy, June 2004.

[1395] Maurice Margenstern with L. Colson, Natasha Jonoska, and GheorghePaun. About P systems and λ-Calculus. In Pre-proceedings of the FifthWorkshop on Membrane Computing (WMC5), Milano, Italy, June 2004,pages 44–62, Milano, Italy, June 2004.

[1396] Xu Xian. Tissue P systems with parallel rules on channels. Progress inNatural Science, 17(4):486–491, 2007.

[1397] Xian Xu. Tissue p systems with parallel rules on channels. In Pre-proceedings of International Conference on Bio-Inspired Computing -Theory and Applications, BIC-TA 2006, Membrane Computing Section,pages 168–177, Wuhan, China, September 2006.

[1398] Xian Xu. Tissue p systems with parallel rules on channels. In Proc. Bio-Inspired Computing – Theory and Applications Conf., BIC-TA 2006,Wuhan, China, September 2006, Membrane Computing Section., 2006.

[1399] Linmin Yang, Zhe Dang, and Oscar H. Ibarra. On stateless automata andP systems. Intenational Journal of Foundations of Computer Science,19(5):1259–1276, 2008.

[1400] Linmin Yang, Yong Wang, and Zhe Dang. Automata on multisets ofcommunicating objects. In Cristian S. Calude, Jose Felix Costa, RudolfFreund, Marion Oswald, and Grzegorz Rozenberg, editors, Proceedings ofthe 7th international conference on Unconventional Computing, volume5204 of Lecture Notes in Computer Science, pages 242–257, 2008.

136

Page 137: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1401] D. Zaharie and G. Ciobanu. Distributed evolutionary algorithms in-spired by membranes in solving continuous optimization problems. InH.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedingsof Membrane Computing, International Workshop, WMC7, pages 522–537, Leiden, The Netherlands, 2006.

[1402] D. Zaharie and G. Ciobanu. Distributed evolutionary algorithms in-spired by membranes in solving continuous optimization problems. InH.J. Hoogeboom, Gh. Paun, and G. Rozenberg, editors, Pre-proceedingsof Membrane Computing, International Workshop, WMC7, pages 522–537, Leiden, The Netherlands, 2006.

[1403] Claudio Zandron. A Model for Molecular Computing: Membrane Sys-tems. PhD thesis, Dipartimento di Scienze dell’Informazione, Universita’degli Studi di Milano, Milano, Italy, 2002.

[1404] Claudio Zandron, Claudio Ferretti, and Giancarlo Mauri. Priorities andvariable thickness of membranes in rewriting P systems, 2000.

[1405] Claudio Zandron, Claudio Ferretti, and Giancarlo Mauri. Solving NP-complete problems using P systems with active membranes. In I. Anto-niou, Cristian Calude, and M.J. Dinneen, editors, Unconventional Modelsof Computation, pages 289–301, London, February 2000. Springer-Verlag.Contributed paper.

[1406] Claudio Zandron, Claudio Ferretti, and Giancarlo Mauri. Two normalforms for rewriting P systems. In Maurice Margenstern and Yurii Ro-gozhin, editors, Machines, Computations, and Universality. Third Inter-national Conference, MCU 2001 Chisinau, Moldava, May 23-27, 2001.Proceedings., volume 2055 of Lecture Notes in Computer Science, pages153–164, Chisinau, Moldova, 2001. Springer-Verlag.

[1407] Claudio Zandron, Claudio Ferretti, and Giancarlo Mauri. Using mem-brane features in P systems. Romanian Journal of Information Scienceand Technology, 4(1-2):241–257, 2001.

[1408] Claudio Zandron, Alberto Leporati, Claudio Ferretti, Giancarlo Mauri,and Mario J. Perez-Jimenez. On the computational efficiency of po-larizationless recognizer P systems with strong division and dissolution.Fundamenta Informaticae, 87(1):79–91, 2008.

[1409] Claudio Zandron, Giancarlo Mauri, and Claudio Ferretti. Universalityand normal forms on membrane systems. In Rudolf Freund and AlicaKelemenova, editors, Proc. Intern. Workshop Grammar Systems 2000,pages 61–74, Bad Ischl, Austria, July 2000.

[1410] Xiangxiang Zeng, Chun Lu, and Linqiang Pan. A weakly universal spik-ing neural p system. Proceedings of the 4th BIC-TA, 2009.

137

Page 138: P-Bibliographyppage.psystems.eu/uploads/3/3f/P-Bibliography-20100714.pdf2010/07/14  · de Felice and Antonio Restivo, editors, Developments in Language The-ory, 9th International

[1411] Ge-Xiang Zhang, Marian Gheorghe, and Chao-Zhong Wu. A quantum-inspired evolutionary algorithm based on P systems for knapsack prob-lem. Fundamenta Informaticae, 87(1):93–116, 2008.

[1412] Liang Zhang, Yao; Huang. A variant of p systems for optimization.NEUROCOMPUTING, 72(4-6):1355–1360, 2009.

[1413] Xingyi Zhang, Yun Jiang, and Linqiang Pan. Small universal spikingneural P systems with exhaustive use of rules. In Proceedings of theThird International Conference on Bio-Inspired Computing: Theoriesand Applications, pages 117–127, 2008.

[1414] Xingyi Zhang, Jun Wang, and Linqiang Pan. A note on the generativepower of axon p systems. International Journal of Computers, Commu-nications & Control, 4:92–98, 2009.

[1415] Xingyi Zhang, Xiangxiang Zeng, and Linqiang Pan. On string languagesgenerated by spiking neural p systems with exhaustive use of rules. Nat-ural Computing, 7(4):535–549, 2008.

[1416] Xingyi Zhang, Xiangxiang Zeng, and Linqiang Pan. Smaller univer-sal spiking neural p systems. Fundamenta Informaticae, 87(1):117–136,2008.

[1417] Xingyi Zhang, Xiangxiang Zeng, and Linqiang Pan. Smaller univer-sal spiking neural P systems. Fundamenta Informaticae, 87(1):117–136,2008.

[1418] Xingyi Zhang, Xiangxiang Zeng, and Linqiang Pan. On string languagesgenerated by asynchronous spiking neural p systems. Theoretical Com-puter Science, 410:2478–2488, 2009.

138