Profiling of Relaxation Time and Diffusivity Distributions using Low Field NMR
NMR Spectroscopy Relaxation Time Phenomenon & Application.
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Transcript of NMR Spectroscopy Relaxation Time Phenomenon & Application.
Relaxation- Return to EquilibriumRelaxation- Return to Equilibrium
t
z axisx,y plane
0
1
2
t
0
1
2
8 8
E-t/T2
t
1-e-t/T1
t
LongitudinalTransverse
Transverse always faster!
magnetization vector's magnetization vector's trajectorytrajectory
The initial vector, Mo, evolves
under the effects of T1 & T2
relaxation and from the influence of an applied rf-field. Here, the magnetization vector M(t) precesses about an effective field axis at a frequency determined by its offset. It's ends up at a "steady state" position as depicted in the lower plot of x- and y- magnetizations.
http://gamma.magnet.fsu.edu/info/tour/bloch/index.html
Relaxation
The T2 relaxation causes the horizontal (xy) magnetisation to
decay. T1 relaxation re-establishes the z-magnetisation. Note
that T1 relaxation is often slower than T2 relaxation.
Relaxation
Spin-lattice Relaxation time (Longitudinal) T1
Relaxation mechanisms: 1. Dipole-Dipole interaction "through space" 2. Electric Quadrupolar Relaxation 3. Paramagnetic Relaxation 4. Scalar Relaxation 5. Chemical Shift Anisotropy Relaxation 6. Spin Rotation
Relaxation
Spin-lattice relaxationSpin-lattice relaxation converts the excess energy into translational, rotational, and vibrational energy of the surrounding atoms and molecules (the lattice).
Spin-spin relaxationSpin-spin relaxation transfers the excess energy to other magnetic nuclei in the sample.
Longitudinal Relaxation time T1
Inversion-Recovery ExperimentInversion-Recovery Experiment
180y (or x) 90y
tD
T1[1].swf
InteractionRange of interaction (Hz)
relevant parameters
Dipolar coupling 104 - 105- abundance of magnetically active nuclei- size of the magnetogyric ratio
Quadrupolar coupling 106 - 109
- size of quadrupolar coupling constant- electric field gradient at the nucleus
Paramagnetic 107 -108 concentration of paramagnetic impurities
Scalar coupling 10 - 103 size of the scalar coupling constants
Chemical Shift Anisotropy (CSA)
10 - 104 - size of the chemical shift anisotropy- symmetry at the nuclear site
6- Spin rotation
Spin-spin relaxation (Transverse) T2
T2 represents the lifetime of the signal in the
transverse plane (XY plane)
T2 is the relaxation time that is responsible for
the line width.
line width at half-height=1/T2
Spin-spin relaxation (Transverse) T2
Two factors contribute to the decay of transverse magnetization.
molecular interactions ( lead to a pure pure T2 molecular effect)
variations in Bo ( lead to an inhomogeneous T2 effect)
Spin-spin relaxation (Transverse) T2
signal width at half-height (line-width )= (pi * T2)-1
180y (or x)90y
tD tD
T1 and T2
In non-viscous liquids, usually T2 = T1.
But some process like scalar coupling with quadrupolar nuclei, chemical exchange, interaction with a paramagnetic center, can accelerate the T2 relaxation such that T2
becomes shorter than T1.
22226
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22226
241
1
41
2
1
531II
5
1
41
4
1
11II
5
2
ccc
ccc
rT
rT
For peptides in aqueous solutions the dipole-dipole spin-lattice and spin-spin relaxation process are mainly mediated by other nearby protons
Relaxation and correlation time
Why The Interest In Why The Interest In Dynamics? Dynamics?
Function requires motion/kinetic energy
Entropic contributions to binding events
Protein Folding/Unfolding
Uncertainty in NMR and crystal structures
Effect on NMR experiments- spin relaxation is dependent on rate of motions know dynamics to predict outcomes and design new experiments
Quantum mechanics/prediction (masochism)
NMR Parameters That Report On NMR Parameters That Report On Dynamics of MoleculesDynamics of Molecules
Number of signals per atom: multiple signals for
slow exchange between conformational states
Linewidths: narrow = faster motion, wide = slower; dependent on MW and conformational states
Exchange of NH with solvent: requires local and/or global unfolding events slow timescales
Heteronuclear relaxation measurements R1 (1/T1) spin-lattice- reports on fast motions R2 (1/T2) spin-spin- reports on fast & slow Heteronuclear NOE- reports on fast & some slow
Linewidth is Dependent on MW
A B A B
1H
1H
15N
15N
1H
15N
Linewidth determined by size of particle
Fragments have narrower linewidths
Small(Fast)
Big(Slow)