Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy...

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Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy Jimmy R.Rich Maria L .Mendes

Transcript of Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy...

Page 1: Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy Jimmy R.Rich Maria L.Mendes.

Nematode Extraction Methods:Baermann Funnel and Modified Baermann Techniques

Kavitha GovindasamyJimmy R.RichMaria L .Mendes

Page 2: Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy Jimmy R.Rich Maria L.Mendes.

A Plant-Parasitic Nematode

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Sampling for Nematodes

Sampling and extracting of nematodes serves two purposes

Diagnosis a current problem Predict a future problem

Page 4: Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy Jimmy R.Rich Maria L.Mendes.

Objectives of sampling and extraction

Nematode identification Population estimation Diagnose a nematode disease Make management decisions Regulatory purposes Research and surveys

Page 5: Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy Jimmy R.Rich Maria L.Mendes.

Some Common Nematode Extraction Methods

Soil samples Baermann funnel Modified Baermann funnel Root Samples Jar incubation and sieving Blending and sieving Foliar samples Punching and incubating Scissors technique

Page 6: Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy Jimmy R.Rich Maria L.Mendes.

Soil Extraction Techniques: Baermann Funnel

Principle

Extraction based on the active movement of the nematodes (motility dependent method)

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Materials required

Funnel Funnel stand Wire mesh Tissue paper/ coffee filter Rubber or plastic tube Clamp or spring clip Beaker or vial Plastic drink cup cover

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Baermann Funnel set up

Soil sample over wire mesh

Funnel

Beaker

Clamp

Rubber tubing

Clamp to hold funnel

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Begin Baermann funnel setup

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Add the soil sample to the coffee filter or tissue paper

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Place the sample on the funnel

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Cover the tissue over the soil

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Incubate for 48 hours and collect the nematodes

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Collect nematodes in a beaker

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Advantages and Limitations

Advantages Recovery of clean, live samples Sieves not needed Inexpensive to constructLimitations Not effective for inactive nematodes Recovery percentages may be low

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Modified Baermann Funnel Baermann trays (Whitehead & Hemming’s modification, 1964)

Principle

Extraction based on the active migration of the nematodes (motility dependent method)

Page 17: Nematode Extraction Methods: Baermann Funnel and Modified Baermann Techniques Kavitha Govindasamy Jimmy R.Rich Maria L.Mendes.

Materials required

Pan or tray Wire mesh Tissue paper, coffee filter Squeeze bottle 500 mesh sieve

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Add water to the dish

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Place soil on tissue paper

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Place tissue paper on the wire mesh

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Fold the tissue over soil, add water

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Completed technique, ready for incubation

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Incubate at room temperature for 3 days

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Following incubation, remove wire mesh from the dish

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Pour water into sieve

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Rinse nematodes from the sieve

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Advantages and Limitations

Advantages Recovery of clean, live samples Inexpensive to construct Materials readily available

Limitations Fine soil particles cloud sample Lack of aeration can be a problem Sieves are needed to concentrate

nematodes

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Acknowledgments Janete Brito, Department of Plant Industry, Gainesville,

Florida Frank Woods, Nematode Assay Lab, University of

Florida, Gainesville, Florida Joey Orajay, Entomology and Nematology Department,

University of Florida, Gainesville, FL

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For additional information or comments, please contact

[email protected] [email protected] [email protected]