Menager bosc2010 mobyle

12
Mobyle Bioinformatics Web Portal project update Hervé Ménager BOSC – July 9 th , 2010

Transcript of Menager bosc2010 mobyle

Page 1: Menager bosc2010 mobyle

Mobyle Bioinformatics Web Portal project update

Hervé Ménager

BOSC – July 9th, 2010

Page 2: Menager bosc2010 mobyle

What is Mobyle?

● a bioinformatics analysis Web portal.● provides an access to bioinformatics command

line tools via a web interface.

● emphasis on:● usability for biologists,● extensibility for developers,● maintainability for server administrators

Page 3: Menager bosc2010 mobyle

What is Mobyle for users?

Page 4: Menager bosc2010 mobyle

What is Mobyle for service providers?

Page 5: Menager bosc2010 mobyle

New: MobLinkshttp://www.crbip.pasteur.fr

Page 6: Menager bosc2010 mobyle

What's next: “viewers”

Page 7: Menager bosc2010 mobyle

What's next: workflows

BCBB Workflow Designer: http://exon.niaid.nih.gov/mobyleWorkflow/

Page 8: Menager bosc2010 mobyle

What's next: build your interface

BCBB Mobyle Interface Designerhttp://exon.niaid.nih.gov/BMID/

Page 9: Menager bosc2010 mobyle

New and Next,Miscelaneous...

● installer● misc. tools (interface validation and deployment,

etc.)● performance improvements● Support for OpenID (thanks to O. Sallou from GenOuest)

● Support for more Resource Management Systems, SGE, Torque, LSF via execution plugins (DRMAA)

Page 10: Menager bosc2010 mobyle

Want to learn more?

● Come see our posters● Poster Z07 - Mobyle Platform: Bioinformatics applications from

command-line to web-based workflows and services● Poster Z13 - MobyleNet: user-centered large spectrum service

integration over distributed sites.

● Technology Track session:● Mobyle: An integrated bioinformatics platform for performing web-

based analyseson Monday, room 306, 11:45->12:10

B. Néron, H. Ménager, C. Maufrais, N. Joly, J. Maupetit, S. Letort, S. Carrere, P. Tuffery, and C. Letondal Mobyle: a new full web bioinformatics framework

Bioinformatics Advance Access published on November 15, 2009, DOI 10.1093/bioinformatics/btp493. Bioinformatics 25: 3005-3011.

Page 11: Menager bosc2010 mobyle

Thanks

Page 12: Menager bosc2010 mobyle

Questions?