Master Program in Biology Unsoed_Curr 2011

8/11/2019 Master Program in Biology Unsoed_Curr 2011

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M A S T E R P R O G R A M

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Website

N B I O L O G Y | J E N D E R A L S O E D I R M A N

dy Program Profile

Master Program in Biologyail Address Jalan dr. Suparno 63 Karangwangkal

Purwokerto, INDONESIA 53122Phone +62 281 625865 Fax +62 281 625865

ttp://pascabio.unsoed.ac.id Email pascabio.unsoed.ac.i

UNIVERS ITY


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Table of Contents

1. Identity................................................................. 12. Program Description............................................ 3

Vision.......................................................................... 3

Mission........................................................................ 3

3. Objectives............................................................ 44. Graduate Profile .................................................. 5

Graduate Competence................................................ 5

Main Competence....................................................... 5

Supporting Competence ............................................. 5Other Related Competence ........................................ 5

Prospective Students .................................................. 6

5. Structure and Systematics of the Curriculum....... 7Streams....................................................................... 7

Curriculum................................................................... 7

Total Credits for Completion of Study ......................... 9

Course Syllabi............................................................. 10


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I D E N T I T Y

1

Identity

Jenderal Soedirman University (UJS) is a public state universitylocated in Purwokerto Central Java Republic of Indonesiathat wasestablished on September 23, 1963

{ http://unsoed.ac.id}

*Accredited by the Nat ional Accreditation Board for Higher Education

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Institution Jenderal Soedirman University

Faculty Biology

Unit Postgraduate Program

Program Stratum S-2 (Master)

Name of Study Program Master Program in Biology

Established January 25, 2002

Degree Offered M.Si. (Master of Science)

Official Language Indonesian (90%) and written English

(required)English (100%) for International Program

(double-degree, joint-degree, etc.)Length of Study Four semesters (Two years)

Operational Status Independent

Learning Model Conventional(lecturing)

Accreditation Status * Accredited B (SK BAN-PT No.013/BAN-PT/Ak-

V/S2/VIII/2007)

Address Jalan dr. Suparno 63 Purwokerto 53122 Telp./Fax.

(0281) 625865

Email [email protected]

Website http://pascabio.unsoed.ac.id


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I D E N T I T

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P R O G R A M D E S C R I P T I O N

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Program Description

Biology Master Program focuses in education and research onsustainable development oftropical bioresources.

V I S I O N

Biology Master Program will become the reference in sustainable development of

tropical bioresources.

M I S S I O N S

The Biology Master Program has missions

1. to conduct learning in order to create competitive graduates capable ofdeveloping science and biotechnology

2. to conduct research in order to develop science and technology relevantto Master Program Specification,

3. to apply science and technology that specify Master Program through

active participation in problem solving of rural development sustainably,

4. to improve nationally and internationally the existing networks withstakeholders.

FIGURE 3.Green Campus.

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O B J E C T I V E S

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Objectives

The academic program is designed

1. to provide comprehensive knowledge, skill and understanding ofBiology,especially Biology of Animal Reproduction, Conservation Biology,Microbiology, Biotechnology, Biomedical orAquaculture,

2. to create skillful and competent graduates in solving problems related to

Animal Reproduction, Conservation Biology, Microbiology,Biotechnology, Biomedical orAquaculture,

3. to create innovative and professional graduates in Biology.

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G R A D U A T E P R O F I L E

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Graduate Profile

1. Biology Expert

2. Biology Researcher

G r a d ua t e C o m p e t e n c e

he graduate of Biology Master Program is a master capable of developingadvance Biology, skillfully implementing biological science, solving problemsthrough integrated research, critically and comprehensively applying analytical

thinking in aspects of animal reproduction, conservation biology, microbiology,biotechnology, biomedical or aquaculture.

M a i n Co m p e t e n c e

1. Graduates are able to conduct independent research, and to recommendbiological concepts to the users,

2. Graduates are able to work professionally both as an individual and as a

team, and to communicate effectively,3. Graduates are able to develop biological concepts as a long life learner.

Suppor t ing Competence

1. Graduates are experts in one of the Master Program Specification, i.e.,animal reproduction, conservation biology, microbiology, biotechnology,biomedical or aquaculture.

2. Graduates are skillful in using information technology to enhance theirknowledge as long life learner.

3. Graduates, using their critical thinking, are able to comment on scientificarticles.

O t h e r Re l a t e d C om p e t e n c e

1. Graduates are skillfully able communicate in Bahasa Indonesia

2. Graduates are skillfully able to communicate in English

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G R A D U A

Prosp

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FIGURE

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T E P R O F I L E

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e c t i v e St u d e n t s

prospective students are those who hold undera including biology, biological education,ntation, animal husbandry, fisheries, marine sences.

.New student selection interview

graduate degree of relevant agriculture, forestry and

cience, pharmacology, and


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T H E C U R R I C U L U M

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Structure and

Systematic of the

Curriculum

S t r e a m s

here are six streams available for students to choose from. These include (1)Biology of Animal Reproduction, (2) Conservation Biology,(3)Microbiology,(4) Biotechnology,(5) Biomedical or (6)Aquaculture.

Curr icu lum

The curriculum structure and systematic is presented in more detailed below.

Course Code Course Credits TotalCredits

Compulsory

BIU-1101 Research Methodology 2 (2-0)BIU-1102 Molecular Biology 3 (2-1)

BIU-1103 Biosystematics 3 (2-1)BIU-1104 Structure and Physiology 3 (2-1)

BIU-1105 Ecology 3 (2-1)BIU-1201 Ethic and Philosophy of Science 2 (2-0)BIU-1202 Seminar of Research Proposal 1 (0-1)

BIU-2201 Thesis Seminar 1 (0-1)

BIU-2202 Thesis 6 (0-6)

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Stream: Animal Reproduction**

BIK-1101 Reproductive Ecology and Physiology ofTropical Animals

3 (2-1)

BIK-1201 Biology of Tropical AnimalDevelopment*

3 (2-1)

6

BIP Elective Courses 7-8 37-38

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Stream: Conservation Biology**

BIK-1102 Population Biology 3 (2-1)BIK-1202 Conservation of Natural Resources * 3 (2-1)

6


Stream: Microbiology**

BIK-1103 Ecology and Physiology of TropicalMicrobiology

3 (2-1)

BIK-1203 Microbial Genetics * 3 (2-1)6


Stream: Biotechnology**

BIK-1104 Bioprocesses 3(2-1)

BIK-1204 Reproductive Biotechnology of TropicalAnimals *

3(2-1)

BIK-1205 Biotechnology of Tropical Plants * 3(2-1)

6


Stream: Biomedical**

BIK-1105 Ecology and Physiology of Parasites 3 (2-1)

BIK-1206 Epidemiology* 3 (2-1)6


Stream: Aquaculture**

BIK-1106 Management and ProductionDevelopment of Aquaculture *

3 (2-1)

BIK-1101 Reproductive Ecology and Physiology of

Tropical Animals

3 (2-1)

BIK-1201 Biology of Tropical AnimalDevelopment*

3 (2-1)

BIK-1102 Population Biology 3 (2-1)BIK-1202 Conservation of Natural Resources * 3 (2-1)

BIK-1103 Ecology and Physiology of TropicalMicrobiology

3 (2-1)

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Elective Courses**

Course Code Course Credits

BIP-1201 Reproductive Biology of Tropical Animals 2 (2-0)BIP-1202 Physiology of Tropical Animals 3 (2-1)

BIP-1203 Animal Tissue Culture 3 (2-1)BIP-1204 Endocrinology 3 (2-1)

BIP-1205 Aquatic Ecology 3 (2-1)BIP-1206 Terrestrial Ecology 3 (2-1)

BIP-1207 Biorestoration of Ecosystem 3 (2-1)BIP-1208 Ecosystem Management 2 (2-0)

BIP-1209 Community-Based Conservation 2 (2-0)

BIP-1210 Industrial Enzymology 3 (2-1)BIP-1211 Industrial microbiology 3 (2-1)BIP-1212 Environmental Microbiology 3 (2-1)

BIP-1213 In Vitro Culture of Plants 3 (2-1)

BIP-1214 Plant Genetic Engineering 3 (2-1)BIP-1215 Pathology of Tropical Animals 2 (2-0)

BIP-1216 Parasitology 3 (2-1)BIP-1217 Nutrition of Aquatic Animals 3 (2-1)

BIP-1218 Medical Microbiology 3 (2-1)

BIP-1219 Immunology 3 (2-1)

Course Code: digit 1 = year; digit 2 = semester; digit 3 and 4 = sequential order of

Notes: BIU = a Code for Compulsory Subjects of the Study ProgramBIK = a Code for Compulsory Subjects of the StreamBIP = a Code of elective subjects

* The courses are available as elective courses for undesignated streams** Stream and Course are run if the participants are more than three people


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Tot a l Cr edi t s for Com ple t ion of St udy

he graduates of Biology Master Program should complete minimum of 37credits distributed within four semesters as follows: 17 credits (semester I), 13- 15 credits (semester), 6 credits (semester III), and 1 credits (semester IV).

Course Code Course Credits Total

Credits

Semester 1

BIU-1101 Research Methodology 2 (2-0)

BIU-1102 Molecular Biology 3 (2-1)

BIU-1103 Biosystematics 3 (2-1)BIU-1104 Structure and Physiology 3 (2-1)BIU-1105 Ecology 3 (2-1)

BIK Streams Compulsory Courses 3 (2-1)17 17


Credits

Semester 1

BIU-1201 Ethic and Philosophy of Science 2 (2-0)

BIU-1202 Seminar of Research Proposal 1 (0-1)BIK Streams Compulsory Courses 3 (2-1)BIP Elective Courses 7-9

13-15 30-32


Credits

Semester 3

BIU-2202 Thesis 6 (0-6)

6 36-38


Credits

Semester 4

BIU-2202 Thesis Defence Seminar 1 (0-1)1 37-39

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Course Sy l lab i

BIU-1101 Research Methodology 2 (2-0) *

Discusses the philosophy, procedure, methods, and evaluation techniques of research inorder to draw valid and reliable information; discusses the unbias research design.Erwin Riyanto Ardli, S.S.i., M.Sc., Dr.rer.nat.

Alice Yuniat i, Ir., M.Sc., Ph.D.

Agus Nuryanto, S.Si., M.Si., Dr.

BIU-1102 Molecular Biology 3 (2-1) *

Discusses the structure and function of molecules within cell, cell interaction andcommunication, molecular regulation within cell cycles; regulation of nucleic acid andprotein synthesis; technology of DNA recombinant and its application to solveenvironmental, medical, and food problems.Hendro Pramono, Drs., M.S., Dr.

Alice Yuniart i, Ir., M.Sc., Ph.D.

BIU-1103 Biosystematics 3 (2-1)*

Discusses the evolution biology, alpha, beta and gamma taxonomy; species concepts;phylogeny, taxonomical revision, taxonomical data management, management ofherbarium and museum.Agus Nuryanto, S.Si., M.Si., Dr.

Romanus Edy Prabowo, S.Si., M.Sc., Ph.D.

Pudji Widodo, Drs., M.Sc ., Dr.

BIU-1104 Structure a nd Physiology 3 (2 -1)*

Discusses the structure on levels of organism, organ system, organ, tissue, cell, organeland its physiological processes.Gratiana E. W., Dra., M.Rep.Sc., Ph.D.

Sugiyono, S.Si., Ph.D.

BIU-1105 Ecology 3 (2 -1)*

Discusses the interactions between diverse organisms in terretrial and quatic ecosystems,and application of ecological concepts to solve environmental, medical, and foodproblems.W. Lestari, Dra., M.Sc., Dr.rer.nat.

Eming Sudiana, Drs., M.Si., Dr.

Dwi Nugroho Wibowo, Drs., M.S., Dr.

BIU-1201 Ethic and Philosophy of Science 2 (2 -0)*Discusses the casuality, essensialism, logic, and phylosophy of Biology; evaluationtheories, paradigm and change, the laws of nature, casuality and explanation; rationale ofscience and its application within the social context and ethical science.Edy Yuw ono, Drs., Ph.D., Prof.

Triani Ha rdiyati, Dra., SU., Dr. Prof.

BIU-1202 Seminar of Research Proposal 1 (0-1)*

Presentation of master research plan including background, problem statements,objectives, conceptual framework, methods, proposed data analysis, and timetable.Thesis committee


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BIU-2201 T hesis Seminar 1 (0-1)*

Presentation of master research project including title, background, problem statements,objectives, conceptual framework, hypothesis, methods, results, discussion, andconclusion in order to diseminate the research and improve the thesis writing.Thesis committee

BIU-2202 T hesis 6 (0-6)*

Thesis writing according to the official guideline. Grading of thesis is based on evaluationof research work, thesis writing and exam.Thesis committee

BIK-1101 Reproductive Ecology and Physiology of Tropical Animals 3

(2-1)*

Discusses the interaction mechanisms between neuroendocrine, immune, nutririon, andenvironmental factors to maintain homeostatic conditions during reproductive procesesof tropical animals; gametogenesis, reproductive cycle and strategies, consequences ofreproduction due to the environmental changes and disturbances.

Yul ia Sist ina, Dra. , M .Sc .Stud., Ph. D.

Edy Yuwono, Drs., Ph.D. Prof.

BIK-1102 Population Biology 3 (2-1)*

Discusses the parameters of population, demographical techniques, population growth,population regulation and its application in conservation and in solving theenvironmental, medical, and food problems.Ima m Widhiono M.Z., Drs., M.S., Dr.rer.nat.

Bambang H eru Budianto, Drs., M.S., Dr.

BIK-1103 Ecology and Physiology of Tropical Microbiology 3 (2-1)*

Discusses the recent finding related to microbes such as nutrition, reproduction, growth,excretion, and quorum sensing; and their interactions with environmental factors.Agus Irianto, Drs. MSc. Ph.D. Prof.

Ardhini Rin Maharning, Dra., M.Sc., Ph.D.

BIK-1104 Bioprocces 3(2-1)*

Discusses the primary and secondary metabolites; and material transformed by cells ororganisms.Nuniek Ina Ratnaningtyas, Dr

Ari Asnani, PhD

BIK-1105 Ecology and Physiology of Parasites 3 (2-1)*

Discusses the physiology of parasitic organisms and disease vectors of human, parasiteinteraction with environmental factors, and control of parasites to solve health problems.Endang Srimurni Kusmintarsih, Dra., SU., PhD.

Bambang H eru Budianto, Drs., M.S., Dr.


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BIK-1106 Managem ent and Production Development of Aquaculture 3

(2-1)*Discusses the development and management of potential water body as aquacultute areas;technology application to improve aquaculture production through engineering, hatcherymanagement and fish rearing; pest and disease control.Isdy Sulistyo, Dr, DEA.

Tjahjo Winanto, Dr.

Endang Widyastuti, MS., Dr.

Agus Iriant o,Drs., MSc., Ph.D., Prof.

BIK-1201 Biology of Tropical Animal Development 3 (2-1)*

Discusses the principles, processes, and development patterns of tropical animals startingwith fertilization, embryonic development, puberty, and senescence; roles of genetic andenvironmental factors on animal development, anomalies and their consequences on

development; and the application of development concepts in the biotechnology.Gratiana E. W., Dra., M.Rep.Sc., Ph.D.

Edi Basuki, Ph.D.

BIK-1202 Conservation of Natural Resources 3 (2 -1)*

Discusses the species extinction, conservation, and restoration; conservation on the levelsof gene, species, and ecosystem; practical application; and relationship betweenconservation of natural resources and society.Moh. Husein Sastra negara, Drs., M.Si., Dr.rer.nat.

Ima m Widhiono M.Z., Drs., M.S., Dr.rer.nat.

BIK-1203 Microbial Genetic s 3 (2-1)*

Discusses the theories and application of classical genetic and molecular analyses on theprokaryotic and eukaryotic organisms; genetic engineering of microbes and its applicationto environment, health, and food issues.Hendro Pramono, Drs., MS., Dr.

BIK-1204 Reproductive Biotec hnology of Tropical Animals 3(2 -1)*

Discusses the biotechnology of cryopreservation of gametes and embryos; principles andprocess of polyploidy, androgenesis, gynogenesis, cloning, formation of chimeras andtransgenic animals.Mas Y edi Sumaryadi, Ir., M.S., Dr., Prof

Yul ia Sist ina, Dra. , M .Sc .Stud., Ph. D.

BIK-1205 Tropical Plant Biotechnology 3(2-1)*

Discusses the biotechnology of vegetatif and generatif reproduction, principles andprocess of polyploidy; and formation of transgenic plants.Nurtjahjo Dw i Sasongko, Dr.Agr.


Suprayogi, Ir., MSc., Ph.D.

BIK-1206 Epidemiology 3 (2-1) *

Discusses the frequency and distribution of infectious and non-infectious disease; andfactors affecting human health.Bambang H eru Budianto, Drs., M.S., Dr.

Endang Srimurni Kusmintarsih, Dra., SU., Ph.D.


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BIP-1201 Reproductive Biology of Tropical Animals 2 (2-0)*

Discusses the sex determination, sexual differentiation, gametogenesis, reproductivecycles and strategies of tropical animals.Yul ia Sist ina, Dra. , M .Sc ., Dr.

Edy Yuw ono, Drs. Ph.D.

Dadang M ulyadi Saleh, Ir., M.S., M.Sc., Ph.D.

BIP-120 2 Physiology of Tropical Animals 3 (2-1)*

Discusses the osmoregulation, excretion, thermoregulation, reproduction, endocrinology,immunology, nutrition, mechanical system and coordinationof animals and theirapplication on health, food, and environment issues.Edy Yuw ono, Drs. Ph.D.

Purnomo Sukardi, PhD.

BIP-120 3 Animal Tissue Culture 3 (2 -1)*Discusses the principles of animal tissue culture and its application to develop basicresearch, development and biomedical research, and biotechnology.Gratiana Eka ningsih Wijayanti, Dra., M.Rep.Sc., Ph.D.

Nuniek I na Retna ningtyas, Dra., M.S., Dr.

BIP-1204 Endocrinology 3 (2-1)*

Discusses the concepts of endocrinology, biosynthesis regulation, mechanism of actionand metabolism of hormones; coordination and integration of animal endocrine system indevelopment, growth, reproduction and osmoregulation; interactions betweenenvironmental factors and endocrine system.Edi Basuki, Ph.D

Gratiana Ekaningsih Wijayanti, Dra., M.Rep.Sc., Ph.D.

Isdy Sulistyo, Ir. Dr. DEA

BIP-120 5 Aquatic Ecology 3 (2-1)*

Discusses the characteristics of freshwater (river, lake), estuarine, ocean, and interactionswithin these ecosystems; trophic dynamics of each aquatic system.W. Lestari, Drs., M.Sc., Dr.rer.nat.

Endang Widyastuti, Dra., M .S., Dr.

Romanus Edi Prabowo, S.Si., M.Sc. Ph.D.

BIP-1206 Terrestria l Ecology 3 (2-1 )*

Discusses the characteristics of natural and agroecosystem and interactions within theseecosystems; trophic dynamics of each terrestrial ecosystem.

Eming Sudiana, Drs., M.Si., Dr.Ima m Widhiono, Drs., M.S., Dr.rer.nat.


BIP-120 7 Biorestoration of Ecosystem 3 (2 -1)*

Discusses the principles of ecosystem restoration through application of biological systemto restore degraded environment due to anthropogenic or natural causes; techniquesapplied in biorestoration and efforts to improve ecosystem quality.Agus Irianto, Drs., M.Sc., Ph.D., Prof.

W. Lestari, Dra.M.Sc. Dr.rer.nat.



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BIP-1208 Ecosystem Management 2 (2-0)*

Discusses the ecosystem degradation due to human activities and natural causes; methodsand monitoring of biological and environment techniques including biology andenvironment indicators, data analysis and its application to planning model of ecosystem.Endang Widyastuti, Dra., M .S., Dr.

Erwin Riyanto Ardli, S.Si, M.Sc. Dr.

Moh. Husein Sastra negara, Drs., M.Si., Dr.rer.nat.

BIP-120 9 Community-Based Conservation 2 (2-0)*

Discusses the community-based conservation for sustainable development throughapproach of society welfare in exploiting natural resources; community-basedconservation strategies and application on the regional or global scale.Ima m Widhiono M.Z., Drs., M.S., Dr.rer.nat.

Slamet Rosyadi, S.Si., M.Si., Dr.

BIP-1210 Industrial Enzimology 3 (2-1)*

Discusses the isolation techniques and enzime purification, kinetic, enzim mechanismaction, regulation of enzimatic activities, and principle techniques of molecular biology inproducing bacterial enzimes.Hera stuti Sri Rukmini, Ir., MS., Dr., Prof.

Ari Asnani, M.Sc., Ph.D

Aisyah Tri Septiana, Ir. MS., Dr.

BIP-1211 Industrial Microbiology 3 (2-1)*

Discusses the scope and history of microbiology in industry, isolation and manipulations

of microbes, growth kinetic and storage of microbes, inoculum separation, media andtechnology of fermentation, enzyme and immobilization of cells, processing and qualitycontrol.Hendro Pramono, Drs. MS. Dr.

Nuniek Ina Ratnaningtyas, MS., Dr.

BIP-1212 Environmental Microbiology 3 (2-1)*

Discusses the diversity of microbes in environtment, functional ecology of the microbes;self purification; roles of microbes in environtment wastes; interactions betweenmicrobes, microbes and mcroorganisms; relationship between microbes andenvironmental health and society; the use of microbes to solve problems of health, food,and environment.Agus Irianto, Drs. MSc. Ph.D. Prof.

BIP-121 3 In Vitro Culture of Plants 3 (2-1)*

Discusses the cukture of cells, tissues, organs, proliferation processes, differentiation andregeneration, cukture media and growth factors, clonal propagation applied toenvironment, food, and health issues.Triani Hardiyati, Dra., SU., Dr., Prof.


BIP-121 4 Plant Genet ic Engineering 3 (2-1)*

Discusses the DNA and chromosome manipulation to produce plants with particulargenes in order to fullfil the needs in health and food; the consequences of the geneticallymodified plants in changing environment.


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Nurtjahjo DS, M a.pp.Sc., Dr.sc. Agr.

Alice Yuniat y, Ir., M.Sc., Ph.D.

BIP-1215 Tropical Animal Pathology 2 (2-0)*

Discuses the concepts and principles of infectious diseases in domestic tropical animals;diagnose methods and evaluation, the major pathogens of domestic tropical animal andcontrol.Agus Irianto, Drs., M.Sc., Ph.D., Prof.

Gratiana E. W., Dra., M.Rep.Sc., Ph.D.

BIP-1216 Parasitology 3 (2-1)*

Discusses the biology of animals and human parasites, immune respond to parasites,contagious methods, parasite distribution and monitoring methods.

Endang Srimurni Kusmintarsih, Dra., S.U, Ph.D.Bambang H eru Budianto, Drs., M.S., Dr.

BIP-1217 Aquatic Animal Nutri t ion 3 (2-1)*

Discusses the nutrition of aquatic animal of larvae, post larvae, juveniles and adult;feeding and food habits of larvae, post larvae, juveniles and adults; needs and utilization ofmicronutrient (amino acid, vitamin and mineral) on aquatic animals.Purnama Sukardi, Ir., Ph.D.

Tjahjo Winanto, Dr.

Edy Yuwono, Drs., Ph.D.

BIP-1218 Medical Microbiology 3 (2-1)*

Discusses the relationship between microorganisms and human health with focus onpathogen, infectious diseases, mechanism of diseases, epideniology, immunology anddisease control by antibiotic, vaccine, and immunostimulant (probiotic).Agus Irianto, Drs. MSc. Ph.D. Prof..

A. Haris Budi Widodo, drg., M. Kes. AP., Dr.

BIP-1219 Immunology 3 (2-1)

Discusses the recent finding in immune system such as innate and acquired immunity,adaptive immunity and its effects on human survival.A. Haris Budi Widodo, drg., M. Kes. AP., Dr.

Bambang H eru Budianto, Drs., MS., Dr.

Master Program in Biology Unsoed_Curr 2011

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