MassHunter Data Analysis on Single Quad - An Introduction...12 MassHunter Data Analysis Software...
Transcript of MassHunter Data Analysis on Single Quad - An Introduction...12 MassHunter Data Analysis Software...
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MassHunter Data Analysis on Single Quad
- An Introduction
Fred Feyerherm
Applications Specialist
Houston Tx
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7000 TQ
5975T LTM SQ
7200 Q-TOF
Unified MS Software
Agilent GC/MS/MS
Agilent GC/MS 5975 Series SQ
5977 Series SQ
7010 TQ
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MassHunter GC/MS Acquisition for GC/MSD
Unified GC/MS Acquisition and
MassHunter Data Analysis; with
MSD ChemStation workflow for GC/MSD
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MassHunter Acquisition
Familiar
Look &
Feel
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New Sequence Table
User
Customization of
Sequence Fields
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Configure for MassHunter or
MSD ChemStation Data Analysis
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Mass Spec Parameters Editor: Tune Selection
and Preview EMV Detector
Settings
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Scan Method Editor Tune Selection
and Preview Consolidated
Detector Settings
Scan Table
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SIM Method Editor
Tune Selection
and Preview
Consolidated
Detector Settings
SIM Table
SIM Ion Table
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SIM/Scan Tune Selection
and Preview
Consolidated
Detector Settings
Scan Table
SIM Table
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MassHunter Data Analysis Software
MassHunters main data analysis modules have different functions:
Quantitative (Quant):
(Target Analysis - Quantitation)
Review Batch results
Visualize quality outliers
Powerful quantitation engine
Flexible result and report presentation
Qualitative (Qual): (Discovery of non-target compounds or features, &
Method Development)
Finds compounds
Identifies compounds
Uses chromatogram and spectra extraction
tools, i.e. deconvolution
Searches El Libraries
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Qualitative Analysis
Data
Navigator
Method
Explorer
Chromatogram
Display
Method
Editor
Spectrum
Display
Results Table
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Chromatogram Display
Comprehensive Display Options
• Display multiple Chromatograms,
from one or many data files.
• Extract multiple signal types, i.e.
TIC, EIC, FID, Instrument curves,
etc.
• Annotate peaks or chromatograms
with text or images
Definition of chromatograms can be
stored in the method and used with
automation.
Text and Image Annotations
Multiple Signals
Multiple Chromatograms
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Spectra
Flexible Spectral Display and Identification
Extract Spectra via:
– Manual spectra selection
– integrated peaks
– Find-by tools, i.e. Deconvolution
Identify Spectra from Library
Searching • Multiple Libraries (*.L)
• Link to NIST MS Search
Background subtraction based on defined
regions or peak definition
Structure Annotations
Mass Difference Annotations
Search Multiple Libraries
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Quantitative Analysis
Compound Information
Results
Information
Batch Information (i.e., Calibration Curve)
Results Information
for the batch can be
displayed. Visual guides
highlight specific data
that fall outside specific,
predefined conditions.
Batch Information
provides easy
visualization and
customization of
relevant desired data.
The Quant Batch
screen looks like this.
Compound Information
displays graphical
representation of the
peak, qualifier
information, spectral
information, and the
ISTD. Visual guides
help identify associated
data problems.
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Batch Screen – Sample & Results Information
These icons filter
outliers in the
display.
In Results Information, the Quantitation Message contains a list of error messages that
result from a compound's quantitation.
Blue = low / Red = high
“Outliers” define and specify results of known problem samples/substances that fall outside predefined conditions.
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Microsoft Excel Based MassHunter Reporting
Over 100 shipping report templates • Templates define report formatting
Customization using standard Excel features (function, formatting, code) • Reports can be altered for desired information & appearance
• Computer Based Training for report customization by users
• Some customization available through Agilent
• Excel 2010 supported
MassHunter application exports data in XML and graphics files for easy
integration with third party software, i.e. LIMS.
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Classic MSD Chemstation Data Analysis • Same as before…Modes: Enhanced, Environmental, Drug Analysis
• Custom Macros Same as before