Lecture10, 10-20-06 Hydrogen Bonding, Liquids

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    First Mid-term ExamWed, October 25

    Locations for exam:Chem 1171: Most students, exceptions belowPSBN 4606: Students whose last name begins

    with the letters A-C If you are unfamiliar with the room location,

    make sure you locate the room prior to theexam time

    Come 5 minutes early and relax prior to the

    exam.

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    Coverage of Material Mid-TermExam 1, 10-25-06

    Chapter 13, Bonding Concepts

    Chapter 14, Covalent Bonding, Orbitals Chapter 16, Liquids and Solids

    Sections 16.1 16.7, pp 765-801Lecture notes for today and Monday will be posted

    this afternoon.

    Information sources used for exam will be1) Lectures2) Text Reading Material

    3) Assigned Homework Problems

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    CLAS Review Session I got back my room request, and the time was changed

    to 6:30-9:30 (though again, it won't necessarily take that long). The

    day is still the same; Monday the 23rd of October (2 days before

    the midterm). The review will be held in LSB 1001, and seating will be first

    come first served, with preference given to those enrolled.

    -- Kyle Jacoby [email protected]

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    Camels in the Desert. What do you see?

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    Intermolecular ForcesIntermolecular Forces

    Hydrogen BondingHydrogen Bonding Special case of dipole-dipole forces.

    By experiments: boiling points of compounds with H-F, H-O,and H-N bonds are abnormally high. Intermolecular forces are abnormally strong. H-bonding requires H bonded to an electronegative element

    (most important for compounds of F, O, and N). Electrons in the H-X (X = electronegative element) lie

    much closer to X than H.

    H has only one electron, so in the H-X bond, the + Hpresents an almost bare proton to the - X. Therefore, H-bonds are strong.

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    H-Bonding

    Occurs when Hydrogen is attached to a

    highly electronegative atom.

    N-H N- O-H N- F-H N-

    N-H O- O-H O- F-H O-

    N-H F- O-H F- F-H F-

    + -Requires Unshared Electron Pairs of Highly

    Electronegative Elements

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    Hydrogen Bonding in

    Water Molecules

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    Structure of Ice

    Observe the orientation of the

    Hydrogen Bonds

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    Why Does Ice Float?

    D2O(s)H2O(s)

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    Intermolecular ForcesIntermolecular Forces

    Hydrogen BondingHydrogen Bonding Hydrogen bonds are responsible for:

    Ice Floating Solids are usually more closely packed than liquids; therefore, solids are more dense than liquids.

    Ice is ordered with an open structure to optimize H-bonding. Therefore, ice is less dense than water. In water the H-O bond length is 1.0 . The OH hydrogen bond length is 1.8 .

    Ice has waters arranged in an open, regular hexagon. Each + H points towards a lone pair on O. Ice floats, so it forms an insulating layer on top of lakes, rivers,

    etc. Therefore, aquatic life can survive in winter.

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    The Boiling Points of the Covalent Hydrides of theElements in Groups 4A, 5A, 6A, and 7A

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    DNA Double Helix-Held Together with

    H-Bonds

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    base: thymine(pyrimidine)

    sugar: 2-deoxyribose

    monophosphate

    no 2-hydroxyl

    (5 to 3)

    5

    3

    base:adenine(purine)

    1

    2

    4

    3 linkage

    5 linkage

    Three Components of DNA Structure

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    Pyrimidines used in Base Pairs,

    DNA

    6-membered rings only

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    Purines used in Base Pairs, DNA

    Fused 5 and 6 member rings

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    DNA Base Pairing

    A-T pairing

    2 H-Bonds

    G-C pairing

    3 H-bonds

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    A-T and G-C Base Pairs Hold theDNA helices together

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    Base Pairs Double Helix

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    Hydrogen-Bondings Role in DNA Structure

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    Intermolecular Forces SummaryIntermolecular Forces Summary

    Intermolecular Intramolecular

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    Some Properties of LiquidsSome Properties of Liquids

    ViscosityViscosity Viscosity is the resistance of a liquid to flow.

    A liquid flows by sliding molecules over eachother. The stronger the intermolecular forces, the

    higher the viscosity.

    Surface TensionSurface Tension Bulk molecules (those in the liquid) are

    equally attracted to their neighbors.

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    Some Properties of LiquidsSome Properties of Liquids

    Surface TensionSurface Tension

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    Some Properties of LiquidsSome Properties of Liquids

    Surface TensionSurface Tension Surface molecules are only attracted inwards

    towards the bulk molecules. Therefore, surface molecules are packed moreclosely than bulk molecules.

    Surface tension is the amount of energyrequired to increase the surface area of aliquid.

    Cohesive forcesbind molecules to eachother.

    Adhesive forcesbind molecules to a surface.

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    Some Properties of LiquidsSome Properties of Liquids

    Surface TensionSurface Tension

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    Surface Tension Mercury

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    Some Properties of LiquidsSome Properties of Liquids

    Surface TensionSurface Tension Meniscusis the shape of the liquid surface.

    If adhesive forces are greater than cohesiveforces, the liquid surface is attracted to itscontainer more than the bulk molecules.

    Therefore, the meniscus is U-shaped (e.g. waterin glass). If cohesive forces are greater than adhesive

    forces, the meniscus is curved downwards. Capillary Action: When a narrow glass tubeis placed in water, the meniscus pulls the

    water up the tube.

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    Water (left) has a downward curving meniscus.Mercury (right)has an upward curving meniscus

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    Capillary ActionCapillary Action

    The tendency of certain liquids to rise in aThe tendency of certain liquids to rise in anarrow tube.narrow tube.

    There is aThere is a

    competitioncompetition

    betweenbetween

    adhesive andadhesive and

    cohesivecohesiveforces.forces.

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    1) Write your perm number inthe first 7 columns of the IDnumber section.

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