Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy...
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![Page 1: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/1.jpg)
Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using
FTIR Spectroscopy
Leif O. Paulson and David T. Anderson
Department of Chemistry
University of Wyoming, Laramie, WY 82071
Monday, June 22, 2009
![Page 2: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/2.jpg)
Overview
• N-Methylacetamide• Experimental setup• Examination and discussion of the Amide I feature• Summary
![Page 3: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/3.jpg)
N-Methylacetamide (NMA)
• H• H
• H
• H
• trans-N-Methylacetamide
![Page 4: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/4.jpg)
wavenumber/cm-1
1700 1705 1710 1715 1720
log 10
(I0/
I)
0.00
0.25
0.50
0.75
1.00
1.25
NMA IR Transition1
FWHM = 4.5 cm-1
1. L. O. Paulson and D. T. Anderson. 61st Ohio State University International Symposium on Molecular Spectroscopy, talk R008 (2006)
![Page 5: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/5.jpg)
Why NMA?
Amide I Vibrational Mode
• Simple model of peptide bond• Well studied specimen• Amide I mode is extremely
sensitive to its environment2
• Large molecule to study
Rationale and Challenges
2. K. E. Amunson and J. Kubelka. J. Phys. Chem. B. 111, 9993 (2007)
![Page 6: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/6.jpg)
Producing Variable Amounts of Orthohydrogen and Parahydrogen3,4
• nH
2
• pH
2
3. S. Tam and M. E. Fajardo. Rev. Sci. Instrum. 70, 1926 (1999)4. Yoshioka, K., Raston, P. L., and D. T. Anderson. Int. Rev. Phys. Chem. 25, 469 (2006)
Cryostat cold tip
Fe(OH)3 catalyst
T=14-80K
Obtain variable amounts of parahydrogen (pH2) and orthohydrogen (oH2)
![Page 7: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/7.jpg)
FTIR Beam
nH2
Bruker IFS 120 HR FTIR
FTIR Beam
MCT Detector
BaF2 substrate
o/p converter
Chemical dopant
Synthesis of NMA-doped pH2 Crystals5
5. M. E. Fajardo and S. Tam. J. Chem. Phys. 108, 4237 (1998)
![Page 8: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/8.jpg)
Experimental Setup
pH2
NM
AFTIR
![Page 9: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/9.jpg)
1695 1700 1705 1710 1715
0.00
0.05
0.10
0.15
0.20
0.25
0.30
0.35
wavenumber (cm-1)
1695 1700 1705 1710 1715
log 1
0(I
0/I
)
0.00
0.20
0.40
0.60
0.80
1764 1766 1768 1770
0.00
0.05
0.10
0.15
0.20
0.25
0.30
1764 1766 1768 1770
0.00
0.10
0.20
0.30
0.40
NMA Compared with Formic Acid6
6. L. O. Paulson and D. T. Anderson. J. Phys. Chem . A. 113, 1770 (2009)
NMA0.005% oH2
NMA51% oH2
Formic Acid0.005% oH2
Formic Acid51% oH2
![Page 10: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/10.jpg)
Matrix Shift as a Function of oH2 Concentration
7. J. Kubelka and T. A. Kiederling. J. Phys. Chem. A. 105, 10922 (2001)
wavenumber (cm-1)
1690 1700 1710 1720 1730 1740
log 10
(I0/
I)
0.0
0.2
0.4
0.6
0.8
1.0
1.2Gas phase
• NMA Amide I gas phase frequency7 is 1731 cm-1
0.005% oH2
51% oH2
Δνmatrix=νpara-νgas (cm-1)
51% ortho 0.005% ortho
-27.6 (1.59%) -23.5 (1.36%)
![Page 11: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/11.jpg)
Intermolecular Interactions in the Matrix
J=0pH2
J=1oH2
coscossinsin21cos3cos2
3,,,
222
2
2
24 HHNMAHNMA
HNMAHNMAquaddip R
RV
022 pHVpHV quaddip 022 oHVoHV quaddip
NMAoHNMApH VV 22
2
ang2
ang
![Page 12: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/12.jpg)
Matrix Shift EffectpH2 oH2
NMA
ν=1
ν=0
Gas phase
In pH2
In pH2 with trace oH2
In pH2/oH2 mixture
1731 cm-1
1710.0 cm-1
1707.5 cm-1
1703.4 cm-1
![Page 13: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/13.jpg)
wavenumber (cm-1)
1695 1700 1705 1710 1715
log 10
(I0/
I)
0.0
0.5
1.0
1.5
Frequency Shift due to Orthohydrogen Amount
0.005% oH2
51% oH2
27.6 cm-1
23.4 cm-1
![Page 14: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/14.jpg)
The Environment of the Matrix
• NMA
NMA
Temp. increases
• Increased diffusion8 allows for oH2 molecules to move about in the matrix at 4.3K
• There is a greater electrostatic interaction between the oH2 quadrupole and NMA dipole moments, causing the oH2 molecules to agglomerate around the NMA dopant9
8. J. van Kranendonk. Solid Hydrogen (Plenum, New York, 1983)9. K. Yoshioka and D. T. Anderson. J. Chem. Phys. 119, 4731 (2003)
1.8K 4.3K
![Page 15: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/15.jpg)
Temperature Effects
51% oH2
wavenumber (cm-1)
1695 1700 1705 1710 1715
log 1
0(I
0/I
)
0.0
0.2
0.4
0.6
0.8
1.0
1.2
1.4
1.6
0.005% oH2
wavenumber (cm-1)
1695 1700 1705 1710 1715
log 1
0(I
0/I
)
0.0
0.2
0.4
0.6
0.8
1.0
1.99K
4.36K
1.92K
1.83K
4.34K
1.65K
![Page 16: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/16.jpg)
NMA Widths with Variable oH2 Concentrations
wavenumber (cm-1)
1695 1700 1705 1710 1715
log 10
(I0/
I)
0.00
0.05
0.10
0.15
0.20
0.25
0.30
0.35
wavenumber (cm-1)
1695 1700 1705 1710 1715
log 1
0(I
0/I
)0.0
0.2
0.4
0.6
0.8
0.005% oH2
FWHM=4.5 cm-151% oH2
FWHM=1.8 cm-1
![Page 17: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/17.jpg)
NMA Matrix Environment at High Orthohydrogen Concentrations
• oH
2
• pH
2
• NMA
• NMA is surrounded by oH2 molecules • Results in a primarily homogeneous environment
![Page 18: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/18.jpg)
Linewidths due to the Matrix Environment
wavenumber (cm-1)
1695 1700 1705 1710 1715
log 10
(I0/
I)
0.00
0.05
0.10
0.15
0.20
0.25
0.30
0.35
wavenumber (cm-1)
1695 1700 1705 1710 1715
log 1
0(I
0/I
)
0.0
0.2
0.4
0.6
0.8
0.005% oH2
FWHM=4.5 cm-1
51% oH2 FWHM=1.8 cm-1
Inhomogeneous Homogeneous
• Broad• Asymmetric
• Narrow• Symmetric
![Page 19: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/19.jpg)
Summary
• NMA Amide I mode is extremely sensitive to its environment
• NMA Amide I mode remains broad in solid pH2 due to residual oH2
1700 1710 1720 1730
0.0
0.2
0.4
0.6
0.8
wavenumber (cm-1)
1740 1750 1760 1770
log 1
0(I 0/
I)
0.0
0.1
0.2
0.3
0.4
-27.6 cm-1
-23.5 cm-1
-8.2 cm-1
-11.4 cm-1
Δνp-o=νortho-νpara (cm-1)
Formic Acid NMA
-3.2 -4.1
NMA
Formic Acid
Red=0.005% oH2
Blue=51% oH2
![Page 20: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.](https://reader034.fdocuments.us/reader034/viewer/2022042822/56649f0b5503460f94c1e9b3/html5/thumbnails/20.jpg)
Acknowledgments
Dr. David T. Anderson
Ms. Sharon C. Kettwich
Ms. Elsbeth Klotz
NSF for the funding
Thank you for listening!!
See S.C.K.’s talk on Wednesday