Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy...

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Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of Chemistry University of Wyoming, Laramie, WY 82071 Monday, June 22, 2009

Transcript of Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy...

Page 1: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using

FTIR Spectroscopy

Leif O. Paulson and David T. Anderson

Department of Chemistry

University of Wyoming, Laramie, WY 82071

Monday, June 22, 2009

Page 2: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Overview

• N-Methylacetamide• Experimental setup• Examination and discussion of the Amide I feature• Summary

Page 3: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

N-Methylacetamide (NMA)

• H• H

• H

• H

• trans-N-Methylacetamide

Page 4: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

wavenumber/cm-1

1700 1705 1710 1715 1720

log 10

(I0/

I)

0.00

0.25

0.50

0.75

1.00

1.25

NMA IR Transition1

FWHM = 4.5 cm-1

1. L. O. Paulson and D. T. Anderson. 61st Ohio State University International Symposium on Molecular Spectroscopy, talk R008 (2006)

Page 5: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Why NMA?

Amide I Vibrational Mode

• Simple model of peptide bond• Well studied specimen• Amide I mode is extremely

sensitive to its environment2

• Large molecule to study

Rationale and Challenges

2. K. E. Amunson and J. Kubelka. J. Phys. Chem. B. 111, 9993 (2007)

Page 6: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Producing Variable Amounts of Orthohydrogen and Parahydrogen3,4

• nH

2

• pH

2

3. S. Tam and M. E. Fajardo. Rev. Sci. Instrum. 70, 1926 (1999)4. Yoshioka, K., Raston, P. L., and D. T. Anderson. Int. Rev. Phys. Chem. 25, 469 (2006)

Cryostat cold tip

Fe(OH)3 catalyst

T=14-80K

Obtain variable amounts of parahydrogen (pH2) and orthohydrogen (oH2)

Page 7: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

FTIR Beam

nH2

Bruker IFS 120 HR FTIR

FTIR Beam

MCT Detector

BaF2 substrate

o/p converter

Chemical dopant

Synthesis of NMA-doped pH2 Crystals5

5. M. E. Fajardo and S. Tam. J. Chem. Phys. 108, 4237 (1998)

Page 8: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Experimental Setup

pH2

NM

AFTIR

Page 9: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

1695 1700 1705 1710 1715

0.00

0.05

0.10

0.15

0.20

0.25

0.30

0.35

wavenumber (cm-1)

1695 1700 1705 1710 1715

log 1

0(I

0/I

)

0.00

0.20

0.40

0.60

0.80

1764 1766 1768 1770

0.00

0.05

0.10

0.15

0.20

0.25

0.30

1764 1766 1768 1770

0.00

0.10

0.20

0.30

0.40

NMA Compared with Formic Acid6

6. L. O. Paulson and D. T. Anderson. J. Phys. Chem . A. 113, 1770 (2009)

NMA0.005% oH2

NMA51% oH2

Formic Acid0.005% oH2

Formic Acid51% oH2

Page 10: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Matrix Shift as a Function of oH2 Concentration

7. J. Kubelka and T. A. Kiederling. J. Phys. Chem. A. 105, 10922 (2001)

wavenumber (cm-1)

1690 1700 1710 1720 1730 1740

log 10

(I0/

I)

0.0

0.2

0.4

0.6

0.8

1.0

1.2Gas phase

• NMA Amide I gas phase frequency7 is 1731 cm-1

0.005% oH2

51% oH2

Δνmatrix=νpara-νgas (cm-1)

51% ortho 0.005% ortho

-27.6 (1.59%) -23.5 (1.36%)

Page 11: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Intermolecular Interactions in the Matrix

J=0pH2

J=1oH2

coscossinsin21cos3cos2

3,,,

222

2

2

24 HHNMAHNMA

HNMAHNMAquaddip R

RV

022 pHVpHV quaddip 022 oHVoHV quaddip

NMAoHNMApH VV 22

2

ang2

ang

Page 12: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Matrix Shift EffectpH2 oH2

NMA

ν=1

ν=0

Gas phase

In pH2

In pH2 with trace oH2

In pH2/oH2 mixture

1731 cm-1

1710.0 cm-1

1707.5 cm-1

1703.4 cm-1

Page 13: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

wavenumber (cm-1)

1695 1700 1705 1710 1715

log 10

(I0/

I)

0.0

0.5

1.0

1.5

Frequency Shift due to Orthohydrogen Amount

0.005% oH2

51% oH2

27.6 cm-1

23.4 cm-1

Page 14: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

The Environment of the Matrix

• NMA

NMA

Temp. increases

• Increased diffusion8 allows for oH2 molecules to move about in the matrix at 4.3K

• There is a greater electrostatic interaction between the oH2 quadrupole and NMA dipole moments, causing the oH2 molecules to agglomerate around the NMA dopant9

8. J. van Kranendonk. Solid Hydrogen (Plenum, New York, 1983)9. K. Yoshioka and D. T. Anderson. J. Chem. Phys. 119, 4731 (2003)

1.8K 4.3K

Page 15: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Temperature Effects

51% oH2

wavenumber (cm-1)

1695 1700 1705 1710 1715

log 1

0(I

0/I

)

0.0

0.2

0.4

0.6

0.8

1.0

1.2

1.4

1.6

0.005% oH2

wavenumber (cm-1)

1695 1700 1705 1710 1715

log 1

0(I

0/I

)

0.0

0.2

0.4

0.6

0.8

1.0

1.99K

4.36K

1.92K

1.83K

4.34K

1.65K

Page 16: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

NMA Widths with Variable oH2 Concentrations

wavenumber (cm-1)

1695 1700 1705 1710 1715

log 10

(I0/

I)

0.00

0.05

0.10

0.15

0.20

0.25

0.30

0.35

wavenumber (cm-1)

1695 1700 1705 1710 1715

log 1

0(I

0/I

)0.0

0.2

0.4

0.6

0.8

0.005% oH2

FWHM=4.5 cm-151% oH2

FWHM=1.8 cm-1

Page 17: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

NMA Matrix Environment at High Orthohydrogen Concentrations

• oH

2

• pH

2

• NMA

• NMA is surrounded by oH2 molecules • Results in a primarily homogeneous environment

Page 18: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Linewidths due to the Matrix Environment

wavenumber (cm-1)

1695 1700 1705 1710 1715

log 10

(I0/

I)

0.00

0.05

0.10

0.15

0.20

0.25

0.30

0.35

wavenumber (cm-1)

1695 1700 1705 1710 1715

log 1

0(I

0/I

)

0.0

0.2

0.4

0.6

0.8

0.005% oH2

FWHM=4.5 cm-1

51% oH2 FWHM=1.8 cm-1

Inhomogeneous Homogeneous

• Broad• Asymmetric

• Narrow• Symmetric

Page 19: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Summary

• NMA Amide I mode is extremely sensitive to its environment

• NMA Amide I mode remains broad in solid pH2 due to residual oH2

1700 1710 1720 1730

0.0

0.2

0.4

0.6

0.8

wavenumber (cm-1)

1740 1750 1760 1770

log 1

0(I 0/

I)

0.0

0.1

0.2

0.3

0.4

-27.6 cm-1

-23.5 cm-1

-8.2 cm-1

-11.4 cm-1

Δνp-o=νortho-νpara (cm-1)

Formic Acid NMA

-3.2 -4.1

NMA

Formic Acid

Red=0.005% oH2

Blue=51% oH2

Page 20: Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Acknowledgments

Dr. David T. Anderson

Ms. Sharon C. Kettwich

Ms. Elsbeth Klotz

NSF for the funding

Thank you for listening!!

See S.C.K.’s talk on Wednesday