Interpretative Antibiotype Reading

download Interpretative Antibiotype Reading

If you can't read please download the document

description

How to read and apply interpretative rules to AST test results.Part of the Microbiology Technical Workshop, Singapore, 2013.

Transcript of Interpretative Antibiotype Reading

  • INTERPRETATIVE

    READING

    Tan Thean Yen

  • To

    interpret

    explain the meaning of (information, words, or actions)

  • What Women Say What It Means

    Yes No

    No Yes

    You have to learn to communicate...

    Just agree with me.

    Are you listening to me!?

  • To

    analyse susceptibility results

    based: organism identification

    all antibiotic results (pattern)

    interpret susceptibility based on above

    Courvalin P. Interpretive reading of in vitro antibiotic susceptibility tests (the antibiogramme).

    Clinical Microbiology and Infection. 1996;2:S26S34.

  • Why interpret?

    To detect unusual results that need further testing or confirmation

    To report appropriate antibiotic results for the organism-infection combination

    To detect emerging resistance

  • Description of action to be taken, based on

    current evidence, in response to specific

    antimicrobial susceptibility test results

    E

    X

    P

    E

    R

    T

    R

    U

    L

    E

    Expert rule

    - Katharine Hepburn

  • Actions

    Recommendations on reporting

    Inference of susceptibility

    Edit results from S to I or R, from I to R, but NEVER I or R to S

    Suppression of results

    Addition of comments

    Advice on further tests

    Advice on referral of isolates

    E

    X

    P

    E

    R

    T

    R

    U

    L

    E

  • Requirements

    Identification of the organism (fully)

    May need to test an extended range of appropriate antibiotics

    Access to a set of expert rules

    E

    X

    P

    E

    R

    T

    R

    U

    L

    E

  • Three areas to cover

    1. Intrinsic resistance

    2. antibiogram

    3. Exceptional phenotypes

  • INTRINSIC RESISTANCE

    Part One

  • Chromosomal

    (born with it)

    I

    N

    T

    R

    I

    N

    S

    I

    C

    R

    E

    S

    I

    S

    T

    A

    N

    C

    E

    resistance which is a characteristic of the species

    results?

    errors in identification or susceptibility testing

    drug should be used with caution

  • I

    N

    T

    R

    I

    N

    S

    I

    C

    R

    E

    S

    I

    S

    T

    A

    N

    C

    E

    Examples Organism Antibiotic resistance

    Enterobacteriaceae Vancomycin

    Gram-positive organism Aztreonam

    Klebsiella species Ampicillin

    Proteus mirabilis Nitrofurantoin Polymyxins

    Serratia marcescens Polymyxins

  • Livermore DM, et al. Interpretative reading: recognizing the unusual and inferring resistance mechanisms from resistance phenotypes.

    J Antimicrob Chemother. 2001 Jul 1;48(suppl 1):87 102

    I

    N

    T

    R

    I

    N

    S

    I

    C

    R

    E

    S

    I

    S

    T

    A

    N

    C

    E

  • I

    N

    T

    R

    I

    N

    S

    I

    C

    R

    E

    S

    I

    S

    T

    A

    N

    C

    E

    http://www.eucast.org/expert_rules/

    http://www.eucast.org/expert_rules/
  • ANTIBIOGRAM READING

    Part Two

  • Test susceptibility

    Infer resistance mechanism

    Interpret clinical susceptibility on the basis

    of the resistance mechanism

    A

    N

    T

    I

    B

    I

    O

    G

    R

    A

    M

    R

    E

    A

    D

    I

    N

    G

  • E

    X

    P

    E

    R

    T

    R

    U

    L

    E

    Species identification

    Antibiotic susceptibility

    REPORT

  • E

    X

    P

    E

    R

    T

    R

    U

    L

    E

    Species identification

    Antibiotic susceptibility

    Antibiogram interpretation

    REPORT

    deduce phenotype

    deduce biochemical resistance

    clinical relevance

    additional tests

    1. re-define susceptibility (categorical)

    2. deduce susceptibility to non-tested antibiotics

    3. clinical comments 4. clinical advice

  • Simple..

    Staphylococcus aureus

    Result: resistant to cefoxitin

    Infer: resistance mediated by mecA

    Interpret: resistant to all beta-lactams

    A

    N

    T

    I

    B

    I

    O

    G

    R

    A

    M

    R

    E

    A

    D

    I

    N

    G

  • More complicated..

    Enterobacteriaceae

    Result: tobramycin non-susceptible

    amikacin & gentamicin susceptible

    Infer: acquired -I enzyme

    Interpret: report amikacin as Intermediate

    A

    N

    T

    I

    B

    I

    O

    G

    R

    A

    M

    R

    E

    A

    D

    I

    N

    G

  • Escherichia coli

    A

    N

    T

    I

    B

    I

    O

    G

    R

    A

    M

    R

    E

    A

    D

    I

    N

    G

    Antibiotic Category

    Ampicillin R

    Amoxicillin-clavulanate S

    Piperacillin-tazobactam S

    Cephalothin R

    Ceftriaxone R

    Ceftazidime S

    Cefepime R

    Cefoxitin S

    Ertapenem S

    Gentamicin S

    Amikacin S

    Ciprofloxacin S

    Trimethoprim-sulfamethoxazole S

    Infer: Extended spectrum beta-lactamase (CTX-M) Interpret: Consider reporting ceftazidime as resistant OR Reporting presence of ESBL with comment

  • Klebsiella pneumoniae

    A

    N

    T

    I

    B

    I

    O

    G

    R

    A

    M

    R

    E

    A

    D

    I

    N

    G

    Infer: ampC enzyme (plasmid-acquired) Interpret: Consider reporting ceftriaxone as resistant

    Antibiotic Category

    Ampicillin R

    Amoxicillin-clavulanate R

    Piperacillin-tazobactam S

    Cephalothin R

    Ceftriaxone I

    Ceftazidime R

    Cefepime S

    Cefoxitin R

    Ertapenem S

    Gentamicin S

    Amikacin S

    Ciprofloxacin S

    Trimethoprim-sulfamethoxazole S

  • Limitations

    High complexity of resistance mechanisms

    Limited information about some mechanisms of resistance

    Multifactorial multiresistance

    Oversimplification interpretative

    Mistakes when deducing mechanisms of resistance

  • EXCEPTIONAL PHENOTYPE

    Part Three

  • Resistance in a species where resistance has not been seen or is rare

    may change with time

    may also be regional or national differences

    E

    X

    C

    E

    P

    T

    I

    O

    N

    A

    L

    P

    H

    E

    N

    O

    T

    Y

    P

    E

  • Resistance in a species where resistance has not been seen or is rare

    errors in identification or susceptibility testing

    send the isolate to a reference laboratory for independent confirmation

    E

    X

    C

    E

    P

    T

    I

    O

    N

    A

    L

    P

    H

    E

    N

    O

    T

    Y

    P

    E

  • Streptococcus pyogenes resistant to penicillin

    Staphylococcus aureus resistant to vancomycin

    resistant to any third-generation cephalosporin, carbapenems, and

    E

    X

    C

    E

    P

    T

    I

    O

    N

    A

    L

    P

    H

    E

    N

    O

    T

    Y

    P

    E

    Examples

  • Anaerobes resistant to metronidazole

    Neisseria gonorrhoeae resistant to third-generation cephalosporin

    Enterobacteriaceae resistant to carbapenems

    E

    X

    C

    E

    P

    T

    I

    O

    N

    A

    L

    P

    H

    E

    N

    O

    T

    Y

    P

    E

    Examples

  • HOW TO BE AN EXPERT

  • ICU patient 28 days in hospital oxidase negative non-fermentative Gram-

    negative bacillus

  • ICU patient 28 days in hospital oxidase negative non-fermentative Gram-

    negative bacillus

    Antibiotic Zone

    (mm)

    Result

    Amoxicillin-clavulanate 6 R

    Piperacillin-tazobactam 6 R

    Ceftriaxone 6 R

    Ceftazidime 26

    Cefepime 18

    Imipenem 6 R

    Ertapenem 6 R

    Meropenem 6 R

    Amikacin 6 R

    Gentamicin 6 R

    Ciprofloxacin 30

    Trimethoprim-

    sulfamethoxazole

    35

    What is the likely organism? How would you report

    susceptibility to: ceftazidime imipenem ciprofloxacin

  • Antibiotic Zone

    (mm)

    Result

    Amoxicillin-

    clavulanate

    6 R

    Cefoxitin 6 R

    Ceftriaxone 27 S

    Ceftazidime 26 S

    Cefepime 24 S

    Imipenem 24 S

    Ertapenem 23 S

    Meropenem 24 S

    Ciprofloxacin 25 S

    Trimethoprim-

    sulfamethoxazole

    20 S

    Enterobacter cloacae

    Isolate from blood culture Patient with suspected ventilator-

    associated pneumonia