G C G A G C G C A G A A C G T G C G G G G G G G G G C G...
Transcript of G C G A G C G C A G A A C G T G C G G G G G G G G G C G...
Mot
if
Gro
up S
peci
ficity
Gro
up S
peci
ficity
Ran
k
Site
Spe
cific
ity
Site
Spe
cific
y R
ank
Test
set S
ites
Aver
age
Test
set S
ites
StD
ev T
ests
et S
ites
TRA
NSF
AC
Cor
rela
tion
TRA
NSF
AC
ID
Mot
if Fi
nder
s
Sets
Rep
eats
Logo
1 8.70e-016 1 1.90e-014 1 8 0.73 0.65 AA 1, 4 GA
TCG GATCGATGCATCGG
CA
ACG C
GGA
TCAGT
A GCCC
ACGC
AACG
AGCA
GTCAGA
CTG
2 6.10e-013 4 2.80e-012 2 5 0.45 0.52 AA 2, 3, 4, 5 PAL AGA
GA
AGCCG
AGGC
GTCC
GTGC
TCA A
GGA
CTG
ACTT
CCA3 1.50e-012 6 1.40e-011 3 6 0.55 0.52 BP, MD, ME 1, 2, 3, 5 G
AAGG
ACGTC
GAGG
CGT
CAGC
GTC
AG
CAG
4 1.70e-011 8 3.40e-010 7 11 1.00 1.20 AA, BP 1, 2, 3, 4, 5 PAL AG
TAG
AGTAGCACGTATCGTC
AG
ACG
ACG C
GGCAGC
AG
AG
GCA
TGC
TAG
AGCG
CCTG
ACATGCG
CATGCA
GAGC
5 1.90e-011 9 1.60e-010 2 10 0.91 1.00 AA 2, 5 PAL,TR CG
AG
CG
TG
AGCTCGAGG GC
GATGC
ACG
ACG
ACG
AGC
TCG
CTGAGCTG
TCAGTC
CATGATCG T
GC
ATGCC A
TGG
CGC A
C CG
6 2.40e-011 10 6.40e-011 2 4 0.36 0.50 AA 1, 2, 3, 4, 5 PAL,TR AACAG
ACA
AGCCT
AACG
TCG
TGAT
AACAGAC C
ACAGCT
AG7 2.70e-011 12 2.40e-010 6 8 0.73 0.79 AA, ME 1, 2, 3, 4, 5 PAL,TR C
GACG G
AGGC
TAGGC
GTA C
G GCGG
CTGCCG
AC
GCA
ATG
8 8.50e-011 15 1.70e-009 11 10 0.91 0.94 AA 2, 3, 5 PAL,TR TAG
TCG
ACGG
CATCG
ATG
CGA
GACGTCAGG
ACG
CGTGACT
GATCG
TCGTCAGA
GCG
CATCG
GC
TAGC
GCAG
AC
9 8.60e-011 16 4.00e-010 8 6 0.55 0.69 AA, ME 1, 3, 4, 5 TGCT
CATGCT
GAG
GCAA
GAGTGT
AGCCC
AACG
GAT
CG
10 2.00e-010 18 5.40e-010 4 5 0.45 0.69 AA, ME 2, 4, 5 TR TA
CTA
GATT
GGCAAA
GACAGG
AAG G
TGGCT
CCG
ACG
11 3.30e-010 19 8.90e-010 5 5 0.45 0.69 AA, BP, MD 1, 2, 3, 4, 5 PAL GCA
TAGAAG
CACA
GGC
CA
AG
TGCA
CCGCA
TG GT
G
12 3.30e-010 19 8.90e-010 5 6 0.55 0.82 AA 1 GACG
TGCT
CAGCC
TGAGC A
TGTG
TGT
GA
AG
GAGA
C
13 3.90e-010 21 7.60e-009 7 13 1.20 1.30 AA, MD 1, 3, 4, 5 PAL CGTC
TG
ACTT
GTGG
CGTC GT
GATCG
ACG
TGCTACGA
GAGC
G
14 7.80e-010 22 2.10e-009 6 4 0.36 0.50 AA, BP 2, 3, 4, 5 TR GCCA
GG GAGCGT
CGGGA
GCTGCT
AGTGCA
GCGGA
TC
ATGGG
15 8.10e-010 23 1.50e-008 9 10 0.91 0.94 AA 1 PAL,TR CG
ACG
TCGG
C GCGTACG
AGTC
TCTG
CG
ATGC
ACG G
CTCAT
GCGTC
GAGT
CTGC
16 1.70e-009 25 3.00e-009 7 5 0.45 0.93 AA, ME 1, 2, 3, 4, 5 GGA
TACAT
CACGGT
CGACCAGA
CAGC
CGGAGT
C
17 5.10e-009 29 2.20e-007 12 14 1.30 1.40 AA 1, 4 PAL,TR GCG
ATGC
GGTCAA
GTAGCA
GTAG
ATCGA
GACGATCGTGACC
GCG
TACTACGA
GC
ACTGATGCG
CTAGC
ATCG G
18 7.50e-009 30 3.40e-008 7 7 0.64 0.92 AA, ME 2 PAL AAT
GCTG
AAG
ACGG
ACA
TCAG
CGTCA
GTGCCT
GC
19 1.10e-008 31 2.00e-007 11 7 0.64 0.50 AA, ME 2, 3, 4, 5 CTA
TAT G
AT
GACG
AGAGA
20 2.20e-008 32 9.10e-007 15 13 1.20 0.98 AA, ME 1, 2, 3, 4, 5 PAL GAGTACTGC
TACTGG
TGC
TC
GTCGGC
G
21 2.40e-008 33 2.00e-007 13 9 0.82 0.87 AA, BP 1, 2, 3, 4, 5 TR TG
CTT
CATGC TT
GGACTG T
CGTGG
T
22 2.80e-008 34 1.10e-006 16 18 1.60 2.10 AA 2 PAL,TR CGTAGCTACGA
GC
TAGC
AGT
CTG
TAGCATCGT
GATCGC
GAG
TCAG
TAG
TCG
CTG GT
GACG
CTGAC
GCAG
ACG
23 2.90e-008 35 1.10e-006 16 16 1.50 1.40 AA 2 PAL,TR TAG
CG
ATGCCAGT
ACG
AG
TGC
CTGATCG
ATCG
ATCG
TACG
ATCGC
GATGC
ATG
CTG
AGC
ATGCT
GC
CG
TGCT
GATGC
ATC
GCG
24 6.30e-008 36 6.30e-006 22 11 1.00 0.63 BP 1, 2, 4 TG
ACG
CGTA
TAG
AGTGA
GT
CGA
TCAG
AGG
CTGC
GTA
TG
25 9.30e-008 37 1.70e-007 10 5 0.45 0.93 AA 2, 5 TCGG
AGCA
CAC
GA
ATC
CGTC
GAT CC
AAGCAC
AAGCA
CCAA
T
26 6.90e-007 41 1.80e-006 18 8 0.73 1.50 AA, BP 3 AG
ACGC
GATGC A
GATCGA
GTAGC
AAG
CG
TG
AG
AGC GA GG
C AG
CG
27 1.30e-006 44 9.30e-006 19 10 0.91 1.10 BP, MD 2, 5 PAL CG
AGCG
AAGG
CGACC
GCG
CG
TCGC
TCA
AC
AGC
GCG
A
28 3.00e-006 45 2.00e-005 20 10 0.91 1.00 AA 5 AG A AG
TC
GTA
TGCC
ACA
TACAG
AAGCT C
AACA
C
29 1.20e-005 49 7.40e-005 30 12 1.10 1.20 BP, MD 2, 3, 4 TCG
TA
AG
AGCTGG
AT
TGCT
CACGTCAGC
AGC
GACTACGA
CG
ATG
AGC
G
30 1.50e-005 52 1.60e-004 33 8 0.73 0.65 BP 2 TG
TGC
TAG
GT
TGC
TAC
TGC
TCAA
GAT
TG
AGTT
GCT
CG
GTAA
G
31 2.10e-005 53 2.10e-004 25 15 1.40 1.60 AA 3, 5 TR TG
ATC C
G TGATCGT
GA
TCG
ATGC
CAG
AG
TCG
CG
ACG
TGC
GAGTACG
TCGATCAGT
G
32 2.80e-005 54 6.90e-005 23 12 1.10 2.20 AA 1, 2 PAL CG
ACATCGATCG T
GGTAC
AGT
ACGATCGA
GC
TGCG
CATCGATGCAT
GC
AGC
TGC G
CTACGA
GGC
GC
ACT
TGA
GG33 3.50e-005 56 2.10e-004 29 10 0.91 1.20 AA, MD, ME 1, 2, 3, 4, 5 G
TCG
GA
ACGCAT
GCTAC
GCTAA
G
34 4.10e-005 57 2.40e-004 35 13 1.20 1.30 MD 2, 4, 5 PAL TA
ATG
AGT
CG
ACTGG
CACTG
AGATGC
GC
TGCAGTACA
T35 5.30e-005 58 8.70e-004 37 12 1.10 0.94 BP 2 PAL T
GCTG
ACTG
TAGG
ACGACTGA
CCG
TG
ATC
TCGC
TAGTC
CTG